Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0001900

Physical Location & Seq

Genomic Coordinates Forward (+)

9033281 .. 9037233

Gene Structure 3953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG117900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGGCCGAGCCAAGCTCCAAGCTCCCCCCTCCGATCAACCCCAAGTCCGGCTTCTGCTCCGAAACGAAAACCTTCCACTCCCTCCGCCCCATAGTCCCTCTCCCGCCTCTCTCCCAGCCCATGTCCCTCGCCCACTACACCCTCTCCCTCCTCCAATCATCCTCCGCCAGTACTGCTCCATCCTCCACCCCCGCCCTCATCGACGCCTCCTCCTCCTCCGCCCGGCACCTCTCCTACTCCCACTTCCTCTCCCAGTTCCACTCCCTCACTCTCTCCCTCTCCCCCCTCCTCTCCAAATCCCAAGTCGCTTACATCCTCTCCCCTCCTTCCCTCCACGTCCCCCTCCTCTACTTCTCCCTCCTCGCCTTAGGCGTCGTCGTCTCCCCCGCCAACCCCCTCAGCTCCCACGACGAGATCGCCTACCAGCTCCGGCTCACCAACCCCGCCCTCGCCTTCGCCACCTCAGCCACCGCTCACAAGCTCCCCAAGGGCTTCAAAACCATCCTCCTCGACTCACCCGAGTTCTACTCCATGATCGAACCCGGCACCCGATCCGCACCACCCTGTAACCCCCCGGTCGAGGTTAACCAAACCGACACGGCCGCCATTCTGTACTCGTCCGGCACCACGGGCCGGGTCAAAGGCGTGGTTCTGTCTCACCGGAACTTCATAGCCTTGATCGCCGGGATGCACGCGCTCCGGATGGAACCCGACTCGGTGGTCCATCCGGTGTCGATGCTCACGCTGCCGCTGTTCCACGTGTTCGGGTTCTTCATGCTGATCCGGGCCGTTTCCTCCGGCGACACTCTGGTTCTGACGGAGCGGTTCGAATTCGAAGGGATGTTGAAGGCCGTGGAGAGGTTCAAGGTGACGCACATGCCGGTGTCGCCGCCGCTGATTGTGGCTCTGACCAAGTCGGAGCTGACTAAGAAATACGACCTCAGCTCGCTCAGACTTCTCGGCAGCGGCGGCGCTCCGCTCGGCAAAGATGTAGCTGAGAGGTTCATTCAGAAATTTCCCAATGTGGAAATAGTGCAGGGATATGGTTTGACTGAATCTGGAGGAGGGGCTACGAGAATGGCAGATGCTGAAGAGGCAAAGCAGTATGGTTCTGTAGGCCGCTTGGCTGAAAATATGGAAGCCAAGATTGTTGACCCAGAAACTGGAGAGGCCTTACCCCCTGGCCAGAGGGGCGAGCTGTGGTTGCGAGGTCCTACAATAATGAAAGGTTATGTAGGAGATGACAAGGCAACTGCTGAGACCTTGGATAAAGACGGGTGGTTAAAGACTGGTGATCTTTGTTATTTTGACGACGAGGGGTTCTTGTACATTGTGGACAGGTTAAAGGAATTGATAAAGTACAAGGCTTATCAGGTGATTGAAAAATCCCCCTCCTTGACAACAATGGTTGTAAATTTGTCAGTCCATTCAAGTAATGTTGTACGTCTGGAACAAATTGCAGGTACCCCCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004321 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0008150 GO:0008152 GO:0009058 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0016408 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

491

Amino Acids

53.15

Weight (kDa)

6.71

Isoelectric Point (pI)

45.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	57 - 411	3e-79	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63380
fragaria_vesca	FvH4_4g24170 FvH4_5g07750 FvH4_5g07750 FvH4_5g07750
malus_domestica	MD06G1147300.v1.1 MD06G1147500.v1.1 MD13G1113700.v1.1 MD14G1161200.v1.1 MD14G1161300.v1.1 MD16G1112900.v1.1 MD16G1113000.v1.1
prunus_persica	Prupe.1G232500_v2.0.a1 Prupe.5G154000_v2.0.a1 Prupe.5G154100_v2.0.a1
pyrus_communis	pycom06g13680 pycom06g13690 pycom13g09900 pycom14g13410 pycom16g09570 pycom16g09580
rosa_chinensis	RchiOBHm_Chr4g0430951 RchiOBHm_Chr7g0190671 RchiOBHm_Chr7g0190681
rosa_laevigata	RLG00000004504 RLG00000006935
rosa_multiflora	Rmu_co8020444.1_g000001 Rmu_sc0006263.1_g000015 Rmu_sc0006709.1_g000003 Rmu_sc0013571.1_g000005
rosa_roxburghii	Rroxscaffold_3G00264410 Rroxscaffold_5G00372640
rosa_rugosa	Rorug04G0247400 Rorug06G0506300 Rorug06G0506400
rosa_samantha	Rh4AG303200 Rh4AG304100 Rh4BG311400 Rh4CG327700 Rh4DG307500 Rh7AG112900 Rh7BG115400 Rh7CG117900 Rh7DG116800
rosa_wichuraiana	Rw4G026360 Rw7G009850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	719
Acc36I	ACCTGC	1 cut(s)	1451
Acc65I	GGTACC	1 cut(s)	1463
AccB1I	GGYRCC	4 cut(s)	225, 545, 623, 1463
AccB7I	CCANNNNNTGG	1 cut(s)	1163
AccBSI	CCGCTC	3 cut(s)	473, 823, 979
AccII	CGCG	1 cut(s)	695
AccIII	TCCGGA	1 cut(s)	699
AclWI	GGATC	2 cut(s)	546, 775
AcoI	YGGCCR	3 cut(s)	3, 600, 1183
AcsI	RAATTY	3 cut(s)	830, 1013, 1414
AcuI	CTGAAG	1 cut(s)	1110
AcvI	CACGTG	1 cut(s)	760
AcyI	GRCGYC	2 cut(s)	204, 372
AfaI	GTAC	6 cut(s)	172, 614, 1328, 1361, 1443, 1465
AfiI	CCNNNNNNNGG	6 cut(s)	47, 222, 580, 633, 858, 1163
AflIII	ACRYGT	1 cut(s)	759
AgsI	TTSAA	5 cut(s)	496, 847, 865, 1382, 1431
AjiI	CACGTC	1 cut(s)	337
AjnI	CCWGG	1 cut(s)	1180
AjuI	GAANNNNNNNTTGG	2 cut(s)	35, 67
Alw26I	GTCTC	3 cut(s)	385, 660, 1253
AlwI	GGATC	2 cut(s)	546, 775
AlwNI	CAGNNNCTG	2 cut(s)	1088, 1163
Ama87I	CYCGRG	1 cut(s)	518
Aor13HI	TCCGGA	1 cut(s)	699
AoxI	GGCC	8 cut(s)	3, 600, 631, 786, 849, 1117, 1170, 1183
ApeKI	GCWGC	2 cut(s)	745, 963
ApoI	RAATTY	3 cut(s)	830, 1013, 1414
ArsI	GACNNNNNNTTYG	2 cut(s)	288, 320
Asp700I	GAANNNNTTC	1 cut(s)	71
Asp718I	GGTACC	1 cut(s)	1463
AspLEI	GCGC	2 cut(s)	697, 974
AspS9I	GGNCC	4 cut(s)	631, 721, 786, 1211
AsuC2I	CCSGG	6 cut(s)	223, 543, 575, 635, 685, 785
AsuHPI	GGTGA	6 cut(s)	427, 507, 650, 880, 1304, 1387
AsuII	TTCGAA	2 cut(s)	828, 834
AvaI	CYCGRG	1 cut(s)	518
AvaII	GGWCC	2 cut(s)	721, 1211
AxyI	CCTNAGG	1 cut(s)	367
BalI	TGGCCA	1 cut(s)	1185
BanI	GGYRCC	4 cut(s)	225, 545, 623, 1463
BbrPI	CACGTG	1 cut(s)	760
BbvCI	CCTCAGC	3 cut(s)	398, 463, 941
BbvI	GCAGC	2 cut(s)	732, 975
BccI	CCATC	4 cut(s)	187, 509, 697, 732
BceAI	ACGGC	3 cut(s)	615, 773, 836
BciT130I	CCWGG	1 cut(s)	1182
BcnI	CCSGG	6 cut(s)	223, 543, 575, 635, 685, 785
BcoDI	GTCTC	3 cut(s)	385, 660, 1253
BfmI	CTRYAG	1 cut(s)	1113
BfoI	RGCGCY	1 cut(s)	975
BfuAI	ACCTGC	1 cut(s)	1451
BglI	GCCNNNNNGGC	1 cut(s)	1191
BisI	GCNGC	9 cut(s)	603, 746, 749, 890, 893, 964, 967, 970, 1120
BlsI	GCNGC	9 cut(s)	604, 747, 750, 891, 894, 965, 968, 971, 1121
BmcAI	AGTACT	1 cut(s)	172
Bme1390I	CCNGG	7 cut(s)	223, 543, 575, 635, 685, 785, 1182
Bme18I	GGWCC	2 cut(s)	721, 1211
BmeT110I	CYCGRG	1 cut(s)	518
BmgBI	CACGTC	1 cut(s)	337
BmgT120I	GGNCC	4 cut(s)	631, 721, 786, 1211
BmiI	GGNNCC	5 cut(s)	227, 547, 625, 708, 1465
BmrFI	CCNGG	7 cut(s)	223, 543, 575, 635, 685, 785, 1182
BmrI	ACTGGG	1 cut(s)	247
BmsI	GCATC	3 cut(s)	678, 726, 1075
BmuI	ACTGGG	1 cut(s)	247
BplI	GAGNNNNNCTC	3 cut(s)	31, 512, 544
BpmI	CTGGAG	2 cut(s)	1080, 1185
Bpu10I	CCTNAGC	3 cut(s)	398, 463, 941
Bpu14I	TTCGAA	2 cut(s)	828, 834
BpuMI	CCSGG	6 cut(s)	223, 543, 575, 635, 685, 785
BsaAI	YACGTR	1 cut(s)	760
BsaHI	GRCGYC	2 cut(s)	204, 372
BsaI	GGTCTC	1 cut(s)	1253
BsaJI	CCNNGG	6 cut(s)	486, 573, 627, 852, 1180, 1263
BsaWI	WCCGGW	3 cut(s)	660, 699, 727
BsaXI	ACNNNNNCTCC	8 cut(s)	128, 158, 194, 224, 233, 263, 302, 332
Bsc4I	CCNNNNNNNGG	6 cut(s)	47, 222, 580, 633, 858, 1163
Bse118I	RCCGGY	1 cut(s)	880
Bse1I	ACTGG	4 cut(s)	168, 253, 1168, 1294
Bse21I	CCTNAGG	1 cut(s)	367
BseAI	TCCGGA	1 cut(s)	699
BseBI	CCWGG	1 cut(s)	1182
BseDI	CCNNGG	6 cut(s)	486, 573, 627, 852, 1180, 1263
BseGI	GGATG	8 cut(s)	158, 179, 312, 501, 693, 708, 724, 846
BseLI	CCNNNNNNNGG	6 cut(s)	47, 222, 580, 633, 858, 1163
BseMII	CTCAG	6 cut(s)	412, 477, 955, 964, 987, 1248
BseNI	ACTGG	4 cut(s)	168, 253, 1168, 1294
BseRI	GAGGAG	9 cut(s)	140, 199, 202, 205, 278, 335, 350, 497, 1077
BseX3I	CGGCCG	1 cut(s)	600
BseXI	GCAGC	2 cut(s)	732, 975
BseYI	CCCAGC	2 cut(s)	114, 1469
BsgI	GTGCAG	1 cut(s)	1055
Bsh1236I	CGCG	1 cut(s)	695
Bsh1285I	CGRYCG	2 cut(s)	579, 603
BshFI	GGCC	8 cut(s)	5, 602, 633, 788, 851, 1119, 1172, 1185
BshNI	GGYRCC	4 cut(s)	225, 545, 623, 1463
BsiEI	CGRYCG	2 cut(s)	579, 603
BsiHKCI	CYCGRG	1 cut(s)	518
BslFI	GGGAC	3 cut(s)	80, 109, 323
BslI	CCNNNNNNNGG	6 cut(s)	47, 222, 580, 633, 858, 1163
BsmAI	GTCTC	3 cut(s)	385, 660, 1253
BsmBI	CGTCTC	1 cut(s)	385
BsmFI	GGGAC	3 cut(s)	80, 109, 323
BsnI	GGCC	8 cut(s)	5, 602, 633, 788, 851, 1119, 1172, 1185
Bso31I	GGTCTC	1 cut(s)	1253
BsoBI	CYCGRG	1 cut(s)	518
Bsp119I	TTCGAA	2 cut(s)	828, 834
Bsp13I	TCCGGA	1 cut(s)	699
Bsp1407I	TGTACA	1 cut(s)	1326
Bsp143I	GATC	7 cut(s)	33, 414, 534, 551, 678, 780, 1294
BspANI	GGCC	8 cut(s)	5, 602, 633, 788, 851, 1119, 1172, 1185
BspCNI	CTCAG	6 cut(s)	411, 476, 954, 963, 988, 1249
BspEI	TCCGGA	1 cut(s)	699
BspFNI	CGCG	1 cut(s)	695
BspLI	GGNNCC	5 cut(s)	227, 547, 625, 708, 1465
BspMI	ACCTGC	1 cut(s)	1451
BspPI	GGATC	2 cut(s)	546, 775
BspT104I	TTCGAA	2 cut(s)	828, 834
BspT107I	GGYRCC	4 cut(s)	225, 545, 623, 1463
BspTNI	GGTCTC	1 cut(s)	1253
BsrBI	CCGCTC	3 cut(s)	473, 823, 979
BsrFI	RCCGGY	1 cut(s)	880
BsrGI	TGTACA	1 cut(s)	1326
BsrI	ACTGG	4 cut(s)	168, 253, 1168, 1294
BssAI	RCCGGY	1 cut(s)	880
BssECI	CCNNGG	6 cut(s)	486, 573, 627, 852, 1180, 1263
BssMI	GATC	7 cut(s)	33, 414, 534, 551, 678, 780, 1294
BssNI	GRCGYC	2 cut(s)	204, 372
BssT1I	CCWWGG	2 cut(s)	486, 1263
Bst2UI	CCWGG	1 cut(s)	1182
Bst6I	CTCTTC	1 cut(s)	1086
BstACI	GRCGYC	2 cut(s)	204, 372
BstAUI	TGTACA	1 cut(s)	1326
BstBAI	YACGTR	1 cut(s)	760
BstBI	TTCGAA	2 cut(s)	828, 834
BstC8I	GCNNGC	3 cut(s)	693, 947, 1196
BstDEI	CTNAG	8 cut(s)	367, 398, 463, 927, 941, 950, 996, 1257
BstDSI	CCRYGG	2 cut(s)	627, 852
BstF5I	GGATG	8 cut(s)	158, 179, 312, 501, 693, 708, 724, 846
BstFNI	CGCG	1 cut(s)	695
BstH2I	RGCGCY	1 cut(s)	975
BstHHI	GCGC	2 cut(s)	697, 974
BstKTI	GATC	7 cut(s)	36, 417, 537, 554, 681, 783, 1297
BstMAI	GTCTC	3 cut(s)	385, 660, 1253
BstMBI	GATC	7 cut(s)	33, 414, 534, 551, 678, 780, 1294
BstMCI	CGRYCG	2 cut(s)	579, 603
BstNI	CCWGG	1 cut(s)	1182
BstNSI	RCATGY	1 cut(s)	880
BstSCI	CCNGG	7 cut(s)	221, 541, 573, 633, 683, 783, 1180
BstSFI	CTRYAG	1 cut(s)	1113
BstUI	CGCG	1 cut(s)	695
BstV1I	GCAGC	2 cut(s)	732, 975
BstZI	CGGCCG	1 cut(s)	600
Bsu36I	CCTNAGG	1 cut(s)	367
BsuRI	GGCC	8 cut(s)	5, 602, 633, 788, 851, 1119, 1172, 1185
BtgI	CCRYGG	2 cut(s)	627, 852
BtrI	CACGTC	1 cut(s)	337
BtsCI	GGATG	8 cut(s)	158, 179, 312, 501, 693, 708, 724, 846
BveI	ACCTGC	1 cut(s)	1451
Cac8I	GCNNGC	3 cut(s)	693, 947, 1196
CaiI	CAGNNNCTG	2 cut(s)	1088, 1163
CfoI	GCGC	2 cut(s)	697, 974
Cfr10I	RCCGGY	1 cut(s)	880
Cfr13I	GGNCC	4 cut(s)	631, 721, 786, 1211
CseI	GACGC	3 cut(s)	212, 361, 880
Csp6I	GTAC	6 cut(s)	171, 613, 1327, 1360, 1442, 1464
CviAII	CATG	4 cut(s)	121, 532, 775, 877
CviQI	GTAC	6 cut(s)	171, 613, 1327, 1360, 1442, 1464
DdeI	CTNAG	8 cut(s)	367, 398, 463, 927, 941, 950, 996, 1257
DpnI	GATC	7 cut(s)	35, 416, 536, 553, 680, 782, 1296
DpnII	GATC	7 cut(s)	33, 414, 534, 551, 678, 780, 1294
DrdI	GACNNNNNNGTC	1 cut(s)	719
DseDI	GACNNNNNNGTC	1 cut(s)	719
EaeI	YGGCCR	3 cut(s)	3, 600, 1183
EagI	CGGCCG	1 cut(s)	600
Eam1104I	CTCTTC	1 cut(s)	1086
EarI	CTCTTC	1 cut(s)	1086
EciI	GGCGGA	3 cut(s)	74, 154, 208
EclXI	CGGCCG	1 cut(s)	600
Eco130I	CCWWGG	2 cut(s)	486, 1263
Eco147I	AGGCCT	1 cut(s)	1172
Eco31I	GGTCTC	1 cut(s)	1253
Eco47I	GGWCC	2 cut(s)	721, 1211
Eco52I	CGGCCG	1 cut(s)	600
Eco57I	CTGAAG	1 cut(s)	1110
Eco72I	CACGTG	1 cut(s)	760
Eco81I	CCTNAGG	1 cut(s)	367
Eco88I	CYCGRG	1 cut(s)	518
EcoO109I	RGGNCCY	1 cut(s)	1211
EcoRI	GAATTC	1 cut(s)	830
EcoRII	CCWGG	1 cut(s)	1180
EcoT14I	CCWWGG	2 cut(s)	486, 1263
ErhI	CCWWGG	2 cut(s)	486, 1263
Esp3I	CGTCTC	1 cut(s)	385
FaeI	CATG	4 cut(s)	124, 535, 778, 880
FalI	AAGNNNNNCTT	2 cut(s)	35, 67
FaqI	GGGAC	3 cut(s)	80, 109, 323
FatI	CATG	4 cut(s)	120, 531, 774, 876
FauI	CCCGC	4 cut(s)	111, 199, 394, 451
Fnu4HI	GCNGC	9 cut(s)	603, 746, 749, 890, 893, 964, 967, 970, 1120
FokI	GGATG	8 cut(s)	145, 166, 299, 488, 700, 711, 715, 853
Fsp4HI	GCNGC	9 cut(s)	603, 746, 749, 890, 893, 964, 967, 970, 1120
GlaI	GCGC	2 cut(s)	696, 973
GluI	GCNGC	9 cut(s)	603, 746, 749, 890, 893, 964, 967, 970, 1120
GsaI	CCCAGC	2 cut(s)	118, 1473
GsuI	CTGGAG	2 cut(s)	1080, 1185
HaeII	RGCGCY	1 cut(s)	975
HaeIII	GGCC	8 cut(s)	5, 602, 633, 788, 851, 1119, 1172, 1185
HgaI	GACGC	3 cut(s)	212, 361, 880
HhaI	GCGC	2 cut(s)	697, 974
Hin1I	GRCGYC	2 cut(s)	204, 372
Hin1II	CATG	4 cut(s)	124, 535, 778, 880
Hin6I	GCGC	2 cut(s)	695, 972
HinP1I	GCGC	2 cut(s)	695, 972
HincII	GTYRAC	2 cut(s)	586, 1153
HindII	GTYRAC	2 cut(s)	586, 1153
HinfI	GANTC	3 cut(s)	512, 713, 1055
HpaI	GTTAAC	1 cut(s)	586
HphI	GGTGA	6 cut(s)	427, 507, 650, 880, 1304, 1387
Hpy166II	GTNNAC	3 cut(s)	586, 1153, 1336
Hpy188I	TCNGA	7 cut(s)	33, 61, 816, 909, 919, 953, 1011
Hpy188III	TCNNGA	3 cut(s)	700, 1059, 1448
Hpy8I	GTNNAC	3 cut(s)	586, 1153, 1336
Hpy99I	CGWCG	5 cut(s)	206, 377, 380, 413, 1316
HpyAV	CCTTC	5 cut(s)	82, 336, 463, 830, 841
HpyCH4IV	ACGT	3 cut(s)	336, 759, 1444
HpyCH4V	TGCA	3 cut(s)	691, 1036, 1460
HpyF3I	CTNAG	8 cut(s)	367, 398, 463, 927, 941, 950, 996, 1257
HpySE526I	ACGT	3 cut(s)	336, 759, 1444
Hsp92I	GRCGYC	2 cut(s)	204, 372
Hsp92II	CATG	4 cut(s)	124, 535, 778, 880
HspAI	GCGC	2 cut(s)	695, 972
Kpn2I	TCCGGA	1 cut(s)	699
KpnI	GGTACC	1 cut(s)	1467
KspAI	GTTAAC	1 cut(s)	586
Kzo9I	GATC	7 cut(s)	33, 414, 534, 551, 678, 780, 1294
Lsp1109I	GCAGC	2 cut(s)	732, 975
LweI	GCATC	3 cut(s)	678, 726, 1075
MaeII	ACGT	3 cut(s)	336, 759, 1444
MaeIII	GTNAC	2 cut(s)	566, 868
MalI	GATC	7 cut(s)	35, 416, 536, 553, 680, 782, 1296
MbiI	CCGCTC	3 cut(s)	473, 823, 979
MboI	GATC	7 cut(s)	33, 414, 534, 551, 678, 780, 1294
MboII	GAAGA	2 cut(s)	763, 1103
MlsI	TGGCCA	1 cut(s)	1185
MluCI	AATT	5 cut(s)	830, 1013, 1349, 1414, 1455
MluNI	TGGCCA	1 cut(s)	1185
MlyI	GAGTC	2 cut(s)	506, 707
MmeI	TCCRAC	1 cut(s)	897
Mox20I	TGGCCA	1 cut(s)	1185
MroI	TCCGGA	1 cut(s)	699
MroXI	GAANNNNTTC	1 cut(s)	71
MscI	TGGCCA	1 cut(s)	1185
MseI	TTAA	3 cut(s)	585, 1283, 1343
MslI	CAYNNNNRTG	1 cut(s)	881
Msp20I	TGGCCA	1 cut(s)	1185
MspA1I	CMGCKG	4 cut(s)	751, 895, 966, 1473
MspR9I	CCNGG	7 cut(s)	223, 543, 575, 635, 685, 785, 1182
MvaI	CCWGG	1 cut(s)	1182
MvnI	CGCG	1 cut(s)	695
NciI	CCSGG	6 cut(s)	223, 543, 575, 635, 685, 785
NdeII	GATC	7 cut(s)	33, 414, 534, 551, 678, 780, 1294
NlaIII	CATG	4 cut(s)	124, 535, 778, 880
NlaIV	GGNNCC	5 cut(s)	227, 547, 625, 708, 1465
NmeAIII	GCCGAG	3 cut(s)	31, 939, 960
NmuCI	GTSAC	1 cut(s)	868
NspI	RCATGY	1 cut(s)	880
NspV	TTCGAA	2 cut(s)	828, 834
PceI	AGGCCT	1 cut(s)	1172
PcsI	WCGNNNNNNNCGW	2 cut(s)	369, 516
PdmI	GAANNNNTTC	1 cut(s)	71
PfeI	GAWTC	1 cut(s)	1055
PflFI	GACNNNGTC	1 cut(s)	913
PflMI	CCANNNNNTGG	1 cut(s)	1163
PkrI	GCNGC	9 cut(s)	604, 747, 750, 891, 894, 965, 968, 971, 1121
PleI	GAGTC	2 cut(s)	506, 707
PmaCI	CACGTG	1 cut(s)	760
PmlI	CACGTG	1 cut(s)	760
PpsI	GAGTC	2 cut(s)	506, 707
Ppu21I	YACGTR	1 cut(s)	760
PpuMI	RGGWCCY	1 cut(s)	1211
Psp5II	RGGWCCY	1 cut(s)	1211
Psp6I	CCWGG	1 cut(s)	1180
PspCI	CACGTG	1 cut(s)	760
PspFI	CCCAGC	2 cut(s)	114, 1469
PspGI	CCWGG	1 cut(s)	1180
PspN4I	GGNNCC	5 cut(s)	227, 547, 625, 708, 1465
PspPI	GGNCC	4 cut(s)	631, 721, 786, 1211
PspPPI	RGGWCCY	1 cut(s)	1211
PstNI	CAGNNNCTG	2 cut(s)	1088, 1163
PsyI	GACNNNGTC	1 cut(s)	913
PvuII	CAGCTG	1 cut(s)	1473
RsaI	GTAC	6 cut(s)	172, 614, 1328, 1361, 1443, 1465
RsaNI	GTAC	6 cut(s)	171, 613, 1327, 1360, 1442, 1464
RseI	CAYNNNNRTG	1 cut(s)	881
SaqAI	TTAA	3 cut(s)	585, 1283, 1343
SatI	GCNGC	9 cut(s)	603, 746, 749, 890, 893, 964, 967, 970, 1120
Sau3AI	GATC	7 cut(s)	33, 414, 534, 551, 678, 780, 1294
Sau96I	GGNCC	4 cut(s)	631, 721, 786, 1211
ScaI	AGTACT	1 cut(s)	172
SchI	GAGTC	2 cut(s)	506, 707
ScrFI	CCNGG	7 cut(s)	223, 543, 575, 635, 685, 785, 1182
SfaNI	GCATC	3 cut(s)	678, 726, 1075
SfcI	CTRYAG	1 cut(s)	1113
SfuI	TTCGAA	2 cut(s)	828, 834
SinI	GGWCC	2 cut(s)	721, 1211
SmiMI	CAYNNNNRTG	1 cut(s)	881
Sse9I	AATT	5 cut(s)	830, 1013, 1349, 1414, 1455
SseBI	AGGCCT	1 cut(s)	1172
StuI	AGGCCT	1 cut(s)	1172
StyD4I	CCNGG	7 cut(s)	221, 541, 573, 633, 683, 783, 1180
StyI	CCWWGG	2 cut(s)	486, 1263
TaiI	ACGT	3 cut(s)	339, 762, 1447
TaqI	TCGA	7 cut(s)	201, 510, 537, 579, 734, 828, 834
TasI	AATT	5 cut(s)	830, 1013, 1349, 1414, 1455
TatI	WGTACW	4 cut(s)	170, 612, 1326, 1359
TauI	GCSGC	7 cut(s)	605, 751, 892, 895, 969, 972, 1122
TfiI	GAWTC	1 cut(s)	1055
Tru1I	TTAA	3 cut(s)	585, 1283, 1343
Tru9I	TTAA	3 cut(s)	585, 1283, 1343
TseFI	GTSAC	1 cut(s)	868
TseI	GCWGC	2 cut(s)	745, 963
Tsp45I	GTSAC	1 cut(s)	868
TspDTI	ATGAA	4 cut(s)	658, 763, 994, 1238
TspGWI	ACGGA	1 cut(s)	833
Tth111I	GACNNNGTC	1 cut(s)	913
Van91I	CCANNNNNTGG	1 cut(s)	1163
VpaK11BI	GGWCC	2 cut(s)	721, 1211
XapI	RAATTY	3 cut(s)	830, 1013, 1414
XceI	RCATGY	1 cut(s)	880
XmnI	GAANNNNTTC	1 cut(s)	71
ZrmI	AGTACT	1 cut(s)	172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.