Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001900

Physical Location & Seq

Genomic Coordinates Reverse (-)

55306482 .. 55309457

Gene Structure 2976 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39966

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGGCCTGTCACAACAACACTACCAGCATTGATCCCAACAGCGGCTTCTGCTCAAACACCAAAACATTCCACAGTCTCAGGCCGAAAGCCCCGCTCCCCTCCGAAACGACGCCGCTTTCGATCACTCACTACATTTTCTCCCACCTCCAAGCCTCCCCTCCTCCGCCCTCCACCCCGGCTCTCCTCGACCCCGCCACGCGCCGCCACATTCTCTACCCCGAGTTCACGCGCCGCGTCAAAACCCTTGCAGCCGCGCTAGAATCGCAACTCAACCTCTCCAGTGGCCACACCGCCTTCGTCATCTCCCCCAATTCTCTCGACCTCCCCATCCTCTACTTCTCTCTCTTTTCCCTCGGCGTAACCGTCTCTCCGTCAAACCCGGCCAGCACCACTCCCGAGATTTCCCGCCAAATCCACCTCAGCAGACCCGTCATCGCCTTCGCCACCTCCGCCACCGCTCACAAACTCCCCAACTCCCTCCGATACGGCGTTGTACTCCTCGACTCCCCGGAATTCCAGTCCATGATGACGTGTGCTCCGGCGCCGGAGCTTCCACGGGTCCGCTTCAGCCAATCCCACACCGCCGCGGTCCTCTACTCGTCGGGGACCACCGGGGCCGTCAAAGGCGTGGAGTTGACCCACCGTAACTGGATTTCCGTGCTGGCGTCGGCGTTCGCGGTTCGGAATCCGACGGCTCCGCCAGCTGTCATGCTCTGCGCGGTGCCGTTCTTCCACGTGTACGGCTTCGGCGTCTGCATGCGGGTGTTGGGGTTCGGCGAGACGCTGGCGTCGATTTCGGGGAGGTTTGATCTGAGAGCGACGCTGAGGGCCGTCGAGGAGTTCAGGATCAGCCACGTGTCGTGGGCCCCGCCGGTGGTGGTGGCGGTGGTGAAGCTCGGGAGCGAGATCGACGGCTACGATCTGAGCTCGCTGCAGGTCGTCGCCTGCGGCGGTGCTCCGCTTGCGAAGAGTGTCATCGATAAGCTGAAGAAACGCCTTCCCAACGTGCAAGTCGCACAGGGATATGGGCTGACAGAGACAACGGGTCGAGTGTTTGGCACGGTAGGCCCAAATGAGACCCGAGTAGAAGGAGCTACTGGAAAGCTGATGTCAAACTTTGAAGCCAAGATTGTTGACCCAGAGACCGGCAGTGCCTTGCCTCCTCTAATGACTGGAGAGATTTGGCTTAGGGGACCAATTATAATGAAAGGTTACATTGGTGATGAAGAAGCAAATGCTACGACTATGGACACTGAAGGATGGTTTAAAACTGGAGACCTTTGCTATATCGACAAAGAAGGTTACCTATTTTTCGTTGATCGGATCAAGGAACTGATCAAGTACAAAGGCTACCAGGTTGCCCCGGCAGAGTTGGAGCATCTGTTTCAATCCCATCCCGATATTGCTGATGCAGCTGTGGTTCCGTATCCTGATGAGGAAGCAGGTCAAGTACCAATGGCCTTTGTGGTCAGGCGCCTAGGAAGTGTCGTCGATGAATCGCAGGTGAAGGATTTTATTGCCAAACAGGTCGCACCGTATAAGAAAATACGACGAGTAGCATTCATCAATGAAGTACCAAAGAGTGCACAAGGTAAATTAATGAGGAAGGAATTAGTCAAACTTGCATTATCCATGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004321 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0008150 GO:0008152 GO:0009058 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0016408 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

546

Amino Acids

59.37

Weight (kDa)

8.67

Isoelectric Point (pI)

44.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	56 - 405	6.3e-70	AMP-binding enzyme
AMP-binding_C	PF13193	457 - 532	4.5e-17	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63380
fragaria_vesca	FvH4_4g24170 FvH4_5g07750 FvH4_5g07750 FvH4_5g07750
malus_domestica	MD06G1147300.v1.1 MD06G1147500.v1.1 MD13G1113700.v1.1 MD14G1161200.v1.1 MD14G1161300.v1.1 MD16G1112900.v1.1 MD16G1113000.v1.1
prunus_persica	Prupe.1G232500_v2.0.a1 Prupe.5G154000_v2.0.a1 Prupe.5G154100_v2.0.a1
pyrus_communis	pycom06g13680 pycom06g13690 pycom13g09900 pycom14g13410 pycom16g09570 pycom16g09580
rosa_chinensis	RchiOBHm_Chr4g0430951 RchiOBHm_Chr7g0190671 RchiOBHm_Chr7g0190681
rosa_laevigata	RLG00000004504 RLG00000006935
rosa_multiflora	Rmu_co8020444.1_g000001 Rmu_sc0006263.1_g000015 Rmu_sc0006709.1_g000003 Rmu_sc0013571.1_g000005
rosa_roxburghii	Rroxscaffold_3G00264410 Rroxscaffold_5G00372640
rosa_rugosa	Rorug04G0247400 Rorug06G0506300 Rorug06G0506400
rosa_samantha	Rh4AG303200 Rh4AG304100 Rh4BG311400 Rh4CG327700 Rh4DG307500 Rh7AG112900 Rh7BG115400 Rh7CG117900 Rh7DG116800
rosa_wichuraiana	Rw4G026360 Rw7G009850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1202
AarI	CACCTGC	1 cut(s)	1492
AasI	GACNNNNNNGTC	1 cut(s)	787
Acc36I	ACCTGC	3 cut(s)	925, 1433, 1492
AccB1I	GGYRCC	3 cut(s)	541, 721, 1473
AccBSI	CCGCTC	2 cut(s)	94, 458
AccII	CGCG	7 cut(s)	199, 229, 234, 254, 587, 677, 719
AclWI	GGATC	3 cut(s)	26, 854, 1331
AcoI	YGGCCR	2 cut(s)	283, 381
AcsI	RAATTY	1 cut(s)	512
AcuI	CTGAAG	3 cut(s)	550, 1007, 1275
AcvI	CACGTG	2 cut(s)	736, 856
AcyI	GRCGYC	6 cut(s)	110, 542, 665, 750, 788, 1474
AfaI	GTAC	5 cut(s)	495, 740, 1343, 1452, 1575
AfiI	CCNNNNNNNGG	3 cut(s)	41, 874, 1145
AflIII	ACRYGT	3 cut(s)	530, 735, 855
AgsI	TTSAA	2 cut(s)	1121, 1388
AhdI	GACNNNNNGTC	1 cut(s)	1044
AjiI	CACGTC	1 cut(s)	531
AjnI	CCWGG	1 cut(s)	1353
AjuI	GAANNNNNNNTTGG	2 cut(s)	29, 61
AluBI	AGCT	8 cut(s)	550, 704, 895, 927, 985, 1094, 1105, 1415
AluI	AGCT	8 cut(s)	550, 704, 895, 927, 985, 1094, 1105, 1415
Alw21I	GWGCWC	4 cut(s)	538, 929, 958, 1588
Alw26I	GTCTC	7 cut(s)	80, 370, 773, 1031, 1070, 1136, 1269
Alw44I	GTGCAC	1 cut(s)	1584
AlwI	GGATC	3 cut(s)	26, 854, 1331
Ama87I	CYCGRG	4 cut(s)	218, 395, 896, 1080
AoxI	GGCC	9 cut(s)	3, 80, 283, 381, 615, 828, 864, 1066, 1458
ApaI	GGGCCC	1 cut(s)	868
ApaLI	GTGCAC	1 cut(s)	1584
ApeKI	GCWGC	3 cut(s)	248, 931, 1412
ApoI	RAATTY	1 cut(s)	512
ArsI	GACNNNNNNTTYG	2 cut(s)	100, 132
AseI	ATTAAT	1 cut(s)	1598
AspA2I	CCTAGG	1 cut(s)	1477
AspLEI	GCGC	6 cut(s)	201, 231, 256, 544, 719, 1476
AspS9I	GGNCC	9 cut(s)	559, 589, 606, 615, 828, 864, 865, 1067, 1193
AsuC2I	CCSGG	5 cut(s)	176, 380, 509, 613, 1364
AsuHPI	GGTGA	3 cut(s)	901, 1232, 1516
AvaI	CYCGRG	4 cut(s)	218, 395, 896, 1080
AvaII	GGWCC	4 cut(s)	559, 589, 606, 1193
AvrII	CCTAGG	1 cut(s)	1477
BaeGI	GKGCMC	2 cut(s)	868, 1588
BalI	TGGCCA	1 cut(s)	285
BanI	GGYRCC	3 cut(s)	541, 721, 1473
BanII	GRGCYC	2 cut(s)	868, 929
BbrPI	CACGTG	2 cut(s)	736, 856
Bbv12I	GWGCWC	4 cut(s)	538, 929, 958, 1588
BbvCI	CCTCAGC	2 cut(s)	419, 824
BbvI	GCAGC	3 cut(s)	260, 918, 1424
BccI	CCATC	3 cut(s)	335, 1254, 1401
BceAI	ACGGC	7 cut(s)	502, 602, 708, 709, 757, 815, 928
BciT130I	CCWGG	1 cut(s)	1355
BciVI	GTATCC	1 cut(s)	1437
BclI	TGATCA	1 cut(s)	1335
BcnI	CCSGG	5 cut(s)	176, 380, 509, 613, 1364
BcoDI	GTCTC	7 cut(s)	80, 370, 773, 1031, 1070, 1136, 1269
BfaI	CTAG	2 cut(s)	257, 1478
BfmI	CTRYAG	1 cut(s)	932
BfoI	RGCGCY	2 cut(s)	545, 1477
BfuAI	ACCTGC	3 cut(s)	925, 1433, 1492
BfuI	GTATCC	1 cut(s)	1437
BlnI	CCTAGG	1 cut(s)	1477
Bme1390I	CCNGG	6 cut(s)	176, 380, 509, 613, 1355, 1364
Bme18I	GGWCC	4 cut(s)	559, 589, 606, 1193
BmeRI	GACNNNNNGTC	1 cut(s)	1044
BmeT110I	CYCGRG	4 cut(s)	218, 395, 896, 1080
BmgBI	CACGTC	1 cut(s)	531
BmgT120I	GGNCC	9 cut(s)	559, 589, 606, 615, 828, 864, 865, 1067, 1193
BmrFI	CCNGG	6 cut(s)	176, 380, 509, 613, 1355, 1364
BmsI	GCATC	2 cut(s)	1387, 1399
BpmI	CTGGAG	3 cut(s)	262, 1194, 1293
Bpu10I	CCTNAGC	3 cut(s)	419, 824, 1187
BpuMI	CCSGG	5 cut(s)	176, 380, 509, 613, 1364
Bsa29I	ATCGAT	1 cut(s)	978
BsaAI	YACGTR	2 cut(s)	736, 856
BsaHI	GRCGYC	6 cut(s)	110, 542, 665, 750, 788, 1474
BsaI	GGTCTC	3 cut(s)	1070, 1136, 1269
BsaJI	CCNNGG	8 cut(s)	174, 352, 507, 554, 585, 612, 1362, 1477
BsaXI	ACNNNNNCTCC	8 cut(s)	122, 152, 352, 382, 520, 550, 1367, 1397
Bsc4I	CCNNNNNNNGG	3 cut(s)	41, 874, 1145
Bse118I	RCCGGY	2 cut(s)	871, 1145
Bse1I	ACTGG	6 cut(s)	279, 517, 653, 1102, 1177, 1276
BseBI	CCWGG	1 cut(s)	1355
BseCI	ATCGAT	1 cut(s)	978
BseDI	CCNNGG	8 cut(s)	174, 352, 507, 554, 585, 612, 1362, 1477
BseGI	GGATG	3 cut(s)	327, 1265, 1393
BseLI	CCNNNNNNNGG	3 cut(s)	41, 874, 1145
BseMII	CTCAG	5 cut(s)	91, 433, 803, 815, 914
BseNI	ACTGG	6 cut(s)	279, 517, 653, 1102, 1177, 1276
BseRI	GAGGAG	5 cut(s)	150, 173, 488, 851, 1152
BseSI	GKGCMC	2 cut(s)	868, 1588
BseXI	GCAGC	3 cut(s)	260, 918, 1424
Bsh1236I	CGCG	7 cut(s)	199, 229, 234, 254, 587, 677, 719
BshFI	GGCC	9 cut(s)	5, 82, 285, 383, 617, 830, 866, 1068, 1460
BshNI	GGYRCC	3 cut(s)	541, 721, 1473
BshVI	ATCGAT	1 cut(s)	978
BsiHKAI	GWGCWC	4 cut(s)	538, 929, 958, 1588
BsiHKCI	CYCGRG	4 cut(s)	218, 395, 896, 1080
BsiSI	CCGG	9 cut(s)	176, 380, 509, 539, 545, 612, 872, 1146, 1364
BslFI	GGGAC	2 cut(s)	619, 1206
BslI	CCNNNNNNNGG	3 cut(s)	41, 874, 1145
BsmAI	GTCTC	7 cut(s)	80, 370, 773, 1031, 1070, 1136, 1269
BsmBI	CGTCTC	2 cut(s)	370, 773
BsmFI	GGGAC	2 cut(s)	619, 1206
BsmI	GAATGC	1 cut(s)	1559
BsnI	GGCC	9 cut(s)	5, 82, 285, 383, 617, 830, 866, 1068, 1460
Bso31I	GGTCTC	3 cut(s)	1070, 1136, 1269
BsoBI	CYCGRG	4 cut(s)	218, 395, 896, 1080
Bsp120I	GGGCCC	1 cut(s)	864
Bsp1286I	GDGCHC	5 cut(s)	538, 868, 929, 958, 1588
Bsp143I	GATC	9 cut(s)	31, 120, 808, 846, 906, 919, 1318, 1323, 1335
BspANI	GGCC	9 cut(s)	5, 82, 285, 383, 617, 830, 866, 1068, 1460
BspCNI	CTCAG	5 cut(s)	90, 432, 804, 816, 915
BspDI	ATCGAT	1 cut(s)	978
BspFNI	CGCG	7 cut(s)	199, 229, 234, 254, 587, 677, 719
BspMAI	CTGCAG	1 cut(s)	936
BspMI	ACCTGC	3 cut(s)	925, 1433, 1492
BspPI	GGATC	3 cut(s)	26, 854, 1331
BspT107I	GGYRCC	3 cut(s)	541, 721, 1473
BspTNI	GGTCTC	3 cut(s)	1070, 1136, 1269
BsrBI	CCGCTC	2 cut(s)	94, 458
BsrFI	RCCGGY	2 cut(s)	871, 1145
BsrI	ACTGG	6 cut(s)	279, 517, 653, 1102, 1177, 1276
BssAI	RCCGGY	2 cut(s)	871, 1145
BssECI	CCNNGG	8 cut(s)	174, 352, 507, 554, 585, 612, 1362, 1477
BssMI	GATC	9 cut(s)	31, 120, 808, 846, 906, 919, 1318, 1323, 1335
BssNI	GRCGYC	6 cut(s)	110, 542, 665, 750, 788, 1474
BssT1I	CCWWGG	1 cut(s)	1477
Bst2UI	CCWGG	1 cut(s)	1355
Bst4CI	ACNGT	5 cut(s)	74, 364, 644, 1063, 1536
Bst6I	CTCTTC	1 cut(s)	962
BstACI	GRCGYC	6 cut(s)	110, 542, 665, 750, 788, 1474
BstBAI	YACGTR	2 cut(s)	736, 856
BstC8I	GCNNGC	8 cut(s)	385, 663, 702, 758, 786, 929, 946, 963
BstDEI	CTNAG	6 cut(s)	77, 419, 812, 824, 923, 1187
BstDSI	CCRYGG	2 cut(s)	554, 585
BstEII	GGTNACC	1 cut(s)	1301
BstF5I	GGATG	3 cut(s)	327, 1265, 1393
BstFNI	CGCG	7 cut(s)	199, 229, 234, 254, 587, 677, 719
BstH2I	RGCGCY	2 cut(s)	545, 1477
BstHHI	GCGC	6 cut(s)	201, 231, 256, 544, 719, 1476
BstKTI	GATC	9 cut(s)	34, 123, 811, 849, 909, 922, 1321, 1326, 1338
BstMAI	GTCTC	7 cut(s)	80, 370, 773, 1031, 1070, 1136, 1269
BstMBI	GATC	9 cut(s)	31, 120, 808, 846, 906, 919, 1318, 1323, 1335
BstMWI	GCNNNNNNNGC	7 cut(s)	48, 262, 449, 701, 962, 1065, 1412
BstNI	CCWGG	1 cut(s)	1355
BstNSI	RCATGY	1 cut(s)	760
BstPI	GGTNACC	1 cut(s)	1301
BstSCI	CCNGG	6 cut(s)	174, 378, 507, 611, 1353, 1362
BstSFI	CTRYAG	1 cut(s)	932
BstSLI	GKGCMC	2 cut(s)	868, 1588
BstUI	CGCG	7 cut(s)	199, 229, 234, 254, 587, 677, 719
BstV1I	GCAGC	3 cut(s)	260, 918, 1424
Bsu15I	ATCGAT	1 cut(s)	978
BsuI	GTATCC	1 cut(s)	1437
BsuRI	GGCC	9 cut(s)	5, 82, 285, 383, 617, 830, 866, 1068, 1460
BsuTUI	ATCGAT	1 cut(s)	978
BtgI	CCRYGG	2 cut(s)	554, 585
BtgZI	GCGATG	1 cut(s)	418
BtrI	CACGTC	1 cut(s)	531
BtsCI	GGATG	3 cut(s)	327, 1265, 1393
BtsI	GCAGTG	1 cut(s)	1156
BtsIMutI	CAGTG	3 cut(s)	286, 1156, 1251
BveI	ACCTGC	3 cut(s)	925, 1433, 1492
Cac8I	GCNNGC	8 cut(s)	385, 663, 702, 758, 786, 929, 946, 963
CfoI	GCGC	6 cut(s)	201, 231, 256, 544, 719, 1476
Cfr10I	RCCGGY	2 cut(s)	871, 1145
Cfr13I	GGNCC	9 cut(s)	559, 589, 606, 615, 828, 864, 865, 1067, 1193
Cfr42I	CCGCGG	1 cut(s)	588
ClaI	ATCGAT	1 cut(s)	978
CseI	GACGC	7 cut(s)	118, 223, 654, 739, 777, 790, 829
CsiI	ACCWGGT	1 cut(s)	1353
Csp6I	GTAC	5 cut(s)	494, 739, 1342, 1451, 1574
CviAII	CATG	4 cut(s)	523, 709, 757, 1633
CviQI	GTAC	5 cut(s)	494, 739, 1342, 1451, 1574
DdeI	CTNAG	6 cut(s)	77, 419, 812, 824, 923, 1187
DinI	GGCGCC	2 cut(s)	543, 1475
DpnI	GATC	9 cut(s)	33, 122, 810, 848, 908, 921, 1320, 1325, 1337
DpnII	GATC	9 cut(s)	31, 120, 808, 846, 906, 919, 1318, 1323, 1335
DraI	TTTAAA	1 cut(s)	1267
DrdI	GACNNNNNNGTC	1 cut(s)	787
DriI	GACNNNNNGTC	1 cut(s)	1044
DseDI	GACNNNNNNGTC	1 cut(s)	787
EaeI	YGGCCR	2 cut(s)	283, 381
Eam1104I	CTCTTC	1 cut(s)	962
Eam1105I	GACNNNNNGTC	1 cut(s)	1044
EarI	CTCTTC	1 cut(s)	962
EciI	GGCGGA	3 cut(s)	153, 439, 687
Ecl136II	GAGCTC	1 cut(s)	927
Eco130I	CCWWGG	1 cut(s)	1477
Eco24I	GRGCYC	2 cut(s)	868, 929
Eco31I	GGTCTC	3 cut(s)	1070, 1136, 1269
Eco47I	GGWCC	4 cut(s)	559, 589, 606, 1193
Eco53kI	GAGCTC	1 cut(s)	927
Eco57I	CTGAAG	3 cut(s)	550, 1007, 1275
Eco72I	CACGTG	2 cut(s)	736, 856
Eco88I	CYCGRG	4 cut(s)	218, 395, 896, 1080
Eco91I	GGTNACC	1 cut(s)	1301
EcoICRI	GAGCTC	1 cut(s)	927
EcoO109I	RGGNCCY	1 cut(s)	865
EcoO65I	GGTNACC	1 cut(s)	1301
EcoRI	GAATTC	1 cut(s)	512
EcoRII	CCWGG	1 cut(s)	1353
EcoT14I	CCWWGG	1 cut(s)	1477
EcoT38I	GRGCYC	2 cut(s)	868, 929
EgeI	GGCGCC	2 cut(s)	543, 1475
EheI	GGCGCC	2 cut(s)	543, 1475
ErhI	CCWWGG	1 cut(s)	1477
Esp3I	CGTCTC	2 cut(s)	370, 773
FaeI	CATG	4 cut(s)	526, 712, 760, 1636
FaqI	GGGAC	2 cut(s)	619, 1206
FatI	CATG	4 cut(s)	522, 708, 756, 1632
FauI	CCCGC	5 cut(s)	99, 199, 413, 753, 876
FbaI	TGATCA	1 cut(s)	1335
FokI	GGATG	3 cut(s)	314, 1272, 1380
FriOI	GRGCYC	2 cut(s)	868, 929
FspBI	CTAG	2 cut(s)	257, 1478
GlaI	GCGC	6 cut(s)	200, 230, 255, 543, 718, 1475
GsuI	CTGGAG	3 cut(s)	262, 1194, 1293
HaeII	RGCGCY	2 cut(s)	545, 1477
HaeIII	GGCC	9 cut(s)	5, 82, 285, 383, 617, 830, 866, 1068, 1460
HapII	CCGG	9 cut(s)	176, 380, 509, 539, 545, 612, 872, 1146, 1364
HgaI	GACGC	7 cut(s)	118, 223, 654, 739, 777, 790, 829
HhaI	GCGC	6 cut(s)	201, 231, 256, 544, 719, 1476
Hin1I	GRCGYC	6 cut(s)	110, 542, 665, 750, 788, 1474
Hin1II	CATG	4 cut(s)	526, 712, 760, 1636
Hin6I	GCGC	6 cut(s)	199, 229, 254, 542, 717, 1474
HinP1I	GCGC	6 cut(s)	199, 229, 254, 542, 717, 1474
HincII	GTYRAC	2 cut(s)	636, 1135
HindII	GTYRAC	2 cut(s)	636, 1135
HinfI	GANTC	4 cut(s)	260, 503, 685, 1496
HpaII	CCGG	9 cut(s)	176, 380, 509, 539, 545, 612, 872, 1146, 1364
HphI	GGTGA	3 cut(s)	901, 1232, 1516
Hpy166II	GTNNAC	5 cut(s)	225, 636, 739, 1135, 1586
Hpy188I	TCNGA	7 cut(s)	103, 482, 684, 690, 813, 924, 1323
Hpy188III	TCNNGA	6 cut(s)	317, 395, 844, 898, 1397, 1430
Hpy8I	GTNNAC	5 cut(s)	225, 636, 739, 1135, 1586
HpyAV	CCTTC	8 cut(s)	304, 448, 1007, 1082, 1250, 1292, 1501, 1600
HpyCH4III	ACNGT	5 cut(s)	74, 364, 644, 1063, 1536
HpyCH4IV	ACGT	4 cut(s)	530, 735, 855, 1005
HpyCH4V	TGCA	7 cut(s)	248, 756, 934, 1009, 1412, 1586, 1625
HpyF10VI	GCNNNNNNNGC	7 cut(s)	48, 262, 449, 701, 962, 1065, 1412
HpyF3I	CTNAG	6 cut(s)	77, 419, 812, 824, 923, 1187
HpySE526I	ACGT	4 cut(s)	530, 735, 855, 1005
Hsp92I	GRCGYC	6 cut(s)	110, 542, 665, 750, 788, 1474
Hsp92II	CATG	4 cut(s)	526, 712, 760, 1636
HspAI	GCGC	6 cut(s)	199, 229, 254, 542, 717, 1474
KasI	GGCGCC	2 cut(s)	541, 1473
Ksp22I	TGATCA	1 cut(s)	1335
KspI	CCGCGG	1 cut(s)	588
Kzo9I	GATC	9 cut(s)	31, 120, 808, 846, 906, 919, 1318, 1323, 1335
LmnI	GCTCC	8 cut(s)	99, 541, 547, 700, 900, 961, 1091, 1375
Lsp1109I	GCAGC	3 cut(s)	260, 918, 1424
LweI	GCATC	2 cut(s)	1387, 1399
MabI	ACCWGGT	1 cut(s)	1353
MaeI	CTAG	2 cut(s)	257, 1478
MaeII	ACGT	4 cut(s)	530, 735, 855, 1005
MaeIII	GTNAC	5 cut(s)	8, 358, 644, 1211, 1301
MalI	GATC	9 cut(s)	33, 122, 810, 848, 908, 921, 1320, 1325, 1337
MbiI	CCGCTC	2 cut(s)	94, 458
MboI	GATC	9 cut(s)	31, 120, 808, 846, 906, 919, 1318, 1323, 1335
MboII	GAAGA	4 cut(s)	721, 979, 1000, 1238
MhlI	GDGCHC	5 cut(s)	538, 868, 929, 958, 1588
MlsI	TGGCCA	1 cut(s)	285
MluCI	AATT	5 cut(s)	310, 512, 1197, 1595, 1610
MluNI	TGGCCA	1 cut(s)	285
Mly113I	GGCGCC	2 cut(s)	542, 1474
MlyI	GAGTC	1 cut(s)	497
MmeI	TCCRAC	2 cut(s)	713, 1353
Mox20I	TGGCCA	1 cut(s)	285
MscI	TGGCCA	1 cut(s)	285
MseI	TTAA	2 cut(s)	1266, 1598
MslI	CAYNNNNRTG	1 cut(s)	761
Msp20I	TGGCCA	1 cut(s)	285
MspA1I	CMGCKG	4 cut(s)	42, 587, 704, 1415
MspI	CCGG	9 cut(s)	176, 380, 509, 539, 545, 612, 872, 1146, 1364
MspR9I	CCNGG	6 cut(s)	176, 380, 509, 613, 1355, 1364
Mva1269I	GAATGC	1 cut(s)	1559
MvaI	CCWGG	1 cut(s)	1355
MvnI	CGCG	7 cut(s)	199, 229, 234, 254, 587, 677, 719
MwoI	GCNNNNNNNGC	7 cut(s)	48, 262, 449, 701, 962, 1065, 1412
NarI	GGCGCC	2 cut(s)	542, 1474
NciI	CCSGG	5 cut(s)	176, 380, 509, 613, 1364
NdeII	GATC	9 cut(s)	31, 120, 808, 846, 906, 919, 1318, 1323, 1335
NlaIII	CATG	4 cut(s)	526, 712, 760, 1636
NmeAIII	GCCGAG	1 cut(s)	333
NmuCI	GTSAC	1 cut(s)	8
NspI	RCATGY	1 cut(s)	760
PaeI	GCATGC	1 cut(s)	760
PaqCI	CACCTGC	1 cut(s)	1492
PcsI	WCGNNNNNNNCGW	5 cut(s)	116, 360, 747, 788, 915
PctI	GAATGC	1 cut(s)	1559
PfeI	GAWTC	3 cut(s)	260, 685, 1496
PleI	GAGTC	1 cut(s)	497
PluTI	GGCGCC	2 cut(s)	545, 1477
PmaCI	CACGTG	2 cut(s)	736, 856
PmlI	CACGTG	2 cut(s)	736, 856
PpsI	GAGTC	1 cut(s)	497
Ppu21I	YACGTR	2 cut(s)	736, 856
PshBI	ATTAAT	1 cut(s)	1598
PsiI	TTATAA	1 cut(s)	1202
Psp124BI	GAGCTC	1 cut(s)	929
Psp6I	CCWGG	1 cut(s)	1353
PspCI	CACGTG	2 cut(s)	736, 856
PspEI	GGTNACC	1 cut(s)	1301
PspGI	CCWGG	1 cut(s)	1353
PspOMI	GGGCCC	1 cut(s)	864
PspPI	GGNCC	9 cut(s)	559, 589, 606, 615, 828, 864, 865, 1067, 1193
PstI	CTGCAG	1 cut(s)	936
PvuII	CAGCTG	2 cut(s)	704, 1415
RsaI	GTAC	5 cut(s)	495, 740, 1343, 1452, 1575
RsaNI	GTAC	5 cut(s)	494, 739, 1342, 1451, 1574
RseI	CAYNNNNRTG	1 cut(s)	761
SacI	GAGCTC	1 cut(s)	929
SacII	CCGCGG	1 cut(s)	588
SaqAI	TTAA	2 cut(s)	1266, 1598
Sau3AI	GATC	9 cut(s)	31, 120, 808, 846, 906, 919, 1318, 1323, 1335
Sau96I	GGNCC	9 cut(s)	559, 589, 606, 615, 828, 864, 865, 1067, 1193
SchI	GAGTC	1 cut(s)	497
ScrFI	CCNGG	6 cut(s)	176, 380, 509, 613, 1355, 1364
SduI	GDGCHC	5 cut(s)	538, 868, 929, 958, 1588
SexAI	ACCWGGT	1 cut(s)	1353
SfaNI	GCATC	2 cut(s)	1387, 1399
SfcI	CTRYAG	1 cut(s)	932
SfoI	GGCGCC	2 cut(s)	543, 1475
Sfr303I	CCGCGG	1 cut(s)	588
SgrAI	CRCCGGYG	1 cut(s)	871
SgrBI	CCGCGG	1 cut(s)	588
SinI	GGWCC	4 cut(s)	559, 589, 606, 1193
SmiMI	CAYNNNNRTG	1 cut(s)	761
SphI	GCATGC	1 cut(s)	760
Sse9I	AATT	5 cut(s)	310, 512, 1197, 1595, 1610
SspDI	GGCGCC	2 cut(s)	541, 1473
SspMI	CTAG	2 cut(s)	257, 1478
SstI	GAGCTC	1 cut(s)	929
StyD4I	CCNGG	6 cut(s)	174, 378, 507, 611, 1353, 1362
StyI	CCWWGG	1 cut(s)	1477
TaaI	ACNGT	5 cut(s)	74, 364, 644, 1063, 1536
TaiI	ACGT	4 cut(s)	533, 738, 858, 1008
TasI	AATT	5 cut(s)	310, 512, 1197, 1595, 1610
TatI	WGTACW	2 cut(s)	493, 1341
TauI	GCSGC	7 cut(s)	45, 115, 204, 234, 254, 587, 951
TfiI	GAWTC	3 cut(s)	260, 685, 1496
Tru1I	TTAA	2 cut(s)	1266, 1598
Tru9I	TTAA	2 cut(s)	1266, 1598
TscAI	CASTG	3 cut(s)	286, 1156, 1258
TseFI	GTSAC	1 cut(s)	8
TseI	GCWGC	3 cut(s)	248, 931, 1412
Tsp45I	GTSAC	1 cut(s)	8
TspDTI	ATGAA	5 cut(s)	1220, 1239, 1509, 1552, 1584
TspGWI	ACGGA	3 cut(s)	360, 646, 1413
TspRI	CASTG	3 cut(s)	286, 1156, 1258
VneI	GTGCAC	1 cut(s)	1584
VpaK11BI	GGWCC	4 cut(s)	559, 589, 606, 1193
VspI	ATTAAT	1 cut(s)	1598
XapI	RAATTY	1 cut(s)	512
XceI	RCATGY	1 cut(s)	760
XmaJI	CCTAGG	1 cut(s)	1477
XspI	CTAG	2 cut(s)	257, 1478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.