Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001900

Physical Location & Seq

Genomic Coordinates Forward (+)

8626172 .. 8629862

Gene Structure 3691 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG115400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGCCGAGCCAACAGCGAACCTCCCCCCTCCGATCAACCCCAAGTCCGGCTTCTGCTCCGAAACGAAAACCTTCCACTCCCTCCGCCCCATAGTCCCTCTCCCTCCTCTCTCCCAGCCCCTCTCCCTCGCCCACTACACCCTCTCCCTCCTCCAATCCTCCGCCACTACTCCCTCCAGTACCCCCGTCCTCATCGACGCCTCCTCCTCCTCCTCCTCCGCCCGCCACCTCTCCTACTCCCACTTCCTCTCCCGCTTCCACTCCCTCACTCTCTCCCTCTCCCCCCTCCTCTCCAAATCCCAAGTCGCTTACATCCTCTCCCCTCCTTCCCTCCACGTCCCCCTCCTCTACTTCTCCCTCCTCGCCTTAGGCGTCGTCGTCTCCCCCGCCAACCCCCTCAGCTCCCACGACGAGATCGCCTACCAGCTCCGACTCACCAACCCCGCCCTCGCCTTCGCCACATCAGCCACCGCTCACAAGCTCCCCAAGGGCTTCAAAACCATCCTCCTCGACTCCCCCGAGTTCTACTCCATGATCCAACCCCCCGGCACCCGACCCTGCTGTAACCCGGTCGAGGTTAACCAGACCGACACGGCCGCCATTCTGTACTCGTCCGGCACCACGGGCCGGGTCAAAGGCGTGGTTCTGTCTCACCGGAACCTCATAGCCTTGATCGCCGGGATGCACGCCCTCCGGATGGAACCCGACCCGGCCGAGCATCCGGTGTCGATGCTCACGCTGCCGCTGTTCCACGTGTTCGGGTTCTTCATGCTGATCCGGGCCGTTTCCTCCGGCGAGACTCTGGTTCTGACGGAGCGGTTCGATTTCGAAGGGATGTTGAAGGCCGTGGAGAGGTTCAAGGTGACGCACATGCCGGTGTCGCCGCCGCTGATTGTGGCTCTGACCAAGTCCGAGCTGACTAAGAAATACGACCTCAGCTCGCTCAGGCTTCTCGGCAGCGGCGGAGCTCCGCTCGGCAAAGATGTAGCTGAGAGGTTCATTCAGAAATTTCCCAATGTGGAAATAGTGCAGGGATATGGTTTGACTGAATCTGGAGGAGGGGCTTCGAGAACGGCAGATGCTGAAGAGGCAAAGCAGTATGCTTCTGTAGGCCGCTTGGCTGAAAATATGGAAGCCAAGATCGTTGACCCAGAAACTGGAGAGGCCTTGCCCCCTGGCCAGAGGGGCGAGCTGTGGTTGCGAGGTCCTACAATAATGAAGGGTTATGTAGGAGATGACAAGGCAACTGCTGAGACCTTGGATAAAGACGGGTGGTTAAAGACTGGTGATCTTTGTTATTTTGACAACGAGGGGTTCTTGTACATTGTGGACAGGTTAAAGGAATTGATAAAGTACAAGGCTTATCAGGTGATTGAAAAATCCCCCTCCTTAACAACGATGGTTGTAAATTTGTCAGTCCATTCAAGTAATGTTGTACGTCTGGAACAAATTGCAGGTACCCCCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004321 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0008150 GO:0008152 GO:0009058 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0016408 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

489

Amino Acids

53.0

Weight (kDa)

6.93

Isoelectric Point (pI)

43.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	55 - 409	3.6e-78	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63380
fragaria_vesca	FvH4_4g24170 FvH4_5g07750 FvH4_5g07750 FvH4_5g07750
malus_domestica	MD06G1147300.v1.1 MD06G1147500.v1.1 MD13G1113700.v1.1 MD14G1161200.v1.1 MD14G1161300.v1.1 MD16G1112900.v1.1 MD16G1113000.v1.1
prunus_persica	Prupe.1G232500_v2.0.a1 Prupe.5G154000_v2.0.a1 Prupe.5G154100_v2.0.a1
pyrus_communis	pycom06g13680 pycom06g13690 pycom13g09900 pycom14g13410 pycom16g09570 pycom16g09580
rosa_chinensis	RchiOBHm_Chr4g0430951 RchiOBHm_Chr7g0190671 RchiOBHm_Chr7g0190681
rosa_laevigata	RLG00000004504 RLG00000006935
rosa_multiflora	Rmu_co8020444.1_g000001 Rmu_sc0006263.1_g000015 Rmu_sc0006709.1_g000003 Rmu_sc0013571.1_g000005
rosa_roxburghii	Rroxscaffold_3G00264410 Rroxscaffold_5G00372640
rosa_rugosa	Rorug04G0247400 Rorug06G0506300 Rorug06G0506400
rosa_samantha	Rh4AG303200 Rh4AG304100 Rh4BG311400 Rh4CG327700 Rh4DG307500 Rh7AG112900 Rh7BG115400 Rh7CG117900 Rh7DG116800
rosa_wichuraiana	Rw4G026360 Rw7G009850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1445
Acc65I	GGTACC	1 cut(s)	1457
AccB1I	GGYRCC	3 cut(s)	548, 617, 1457
AccB7I	CCANNNNNTGG	1 cut(s)	1157
AccBSI	CCGCTC	3 cut(s)	473, 817, 973
AccIII	TCCGGA	1 cut(s)	693
AclWI	GGATC	2 cut(s)	529, 769
AcoI	YGGCCR	4 cut(s)	3, 594, 711, 1177
AcsI	RAATTY	2 cut(s)	1007, 1408
AcuI	CTGAAG	1 cut(s)	1104
AcvI	CACGTG	1 cut(s)	754
AcyI	GRCGYC	2 cut(s)	198, 372
AfaI	GTAC	6 cut(s)	181, 608, 1322, 1355, 1437, 1459
AfiI	CCNNNNNNNGG	6 cut(s)	47, 574, 627, 697, 852, 1157
AflIII	ACRYGT	1 cut(s)	753
AgsI	TTSAA	5 cut(s)	496, 841, 859, 1376, 1425
AjiI	CACGTC	1 cut(s)	337
AjnI	CCWGG	1 cut(s)	1174
AjuI	GAANNNNNNNTTGG	2 cut(s)	35, 67
AluBI	AGCT	9 cut(s)	402, 427, 481, 916, 939, 968, 989, 1192, 1467
AluI	AGCT	9 cut(s)	402, 427, 481, 916, 939, 968, 989, 1192, 1467
Alw21I	GWGCWC	1 cut(s)	970
Alw26I	GTCTC	4 cut(s)	385, 654, 791, 1247
AlwI	GGATC	2 cut(s)	529, 769
AlwNI	CAGNNNCTG	2 cut(s)	1082, 1157
Ama87I	CYCGRG	1 cut(s)	518
Aor13HI	TCCGGA	1 cut(s)	693
AoxI	GGCC	9 cut(s)	3, 594, 625, 711, 780, 843, 1111, 1164, 1177
ApeKI	GCWGC	2 cut(s)	739, 957
ApoI	RAATTY	2 cut(s)	1007, 1408
ArsI	GACNNNNNNTTYG	2 cut(s)	288, 320
Asp700I	GAANNNNTTC	1 cut(s)	71
Asp718I	GGTACC	1 cut(s)	1457
AspS9I	GGNCC	3 cut(s)	625, 780, 1205
AsuC2I	CCSGG	6 cut(s)	546, 569, 629, 679, 710, 779
AsuHPI	GGTGA	5 cut(s)	427, 644, 874, 1298, 1381
AsuII	TTCGAA	1 cut(s)	828
AvaI	CYCGRG	1 cut(s)	518
AvaII	GGWCC	1 cut(s)	1205
AxyI	CCTNAGG	1 cut(s)	367
BalI	TGGCCA	1 cut(s)	1179
BanI	GGYRCC	3 cut(s)	548, 617, 1457
BanII	GRGCYC	1 cut(s)	970
BbrPI	CACGTG	1 cut(s)	754
Bbv12I	GWGCWC	1 cut(s)	970
BbvCI	CCTCAGC	2 cut(s)	398, 935
BbvI	GCAGC	2 cut(s)	726, 969
BccI	CCATC	3 cut(s)	509, 691, 1393
BceAI	ACGGC	4 cut(s)	609, 767, 830, 1089
BciT130I	CCWGG	1 cut(s)	1176
BcnI	CCSGG	6 cut(s)	546, 569, 629, 679, 710, 779
BcoDI	GTCTC	4 cut(s)	385, 654, 791, 1247
BfmI	CTRYAG	1 cut(s)	1107
BfuAI	ACCTGC	1 cut(s)	1445
BglI	GCCNNNNNGGC	1 cut(s)	1185
BisI	GCNGC	8 cut(s)	597, 740, 743, 884, 887, 958, 961, 1114
BlsI	GCNGC	8 cut(s)	598, 741, 744, 885, 888, 959, 962, 1115
Bme1390I	CCNGG	7 cut(s)	546, 569, 629, 679, 710, 779, 1176
Bme18I	GGWCC	1 cut(s)	1205
BmeT110I	CYCGRG	1 cut(s)	518
BmgBI	CACGTC	1 cut(s)	337
BmgT120I	GGNCC	3 cut(s)	625, 780, 1205
BmiI	GGNNCC	5 cut(s)	550, 619, 659, 702, 1459
BmrFI	CCNGG	7 cut(s)	546, 569, 629, 679, 710, 779, 1176
BmsI	GCATC	4 cut(s)	672, 720, 727, 1069
BplI	GAGNNNNNCTC	4 cut(s)	512, 544, 957, 989
BpmI	CTGGAG	3 cut(s)	160, 1074, 1179
Bpu10I	CCTNAGC	3 cut(s)	398, 935, 944
Bpu14I	TTCGAA	1 cut(s)	828
BpuMI	CCSGG	6 cut(s)	546, 569, 629, 679, 710, 779
BsaAI	YACGTR	1 cut(s)	754
BsaHI	GRCGYC	2 cut(s)	198, 372
BsaI	GGTCTC	1 cut(s)	1247
BsaJI	CCNNGG	6 cut(s)	486, 544, 621, 846, 1174, 1257
BsaWI	WCCGGW	3 cut(s)	654, 693, 721
BsaXI	ACNNNNNCTCC	8 cut(s)	128, 158, 188, 218, 233, 263, 302, 332
Bsc4I	CCNNNNNNNGG	6 cut(s)	47, 574, 627, 697, 852, 1157
Bse118I	RCCGGY	1 cut(s)	874
Bse1I	ACTGG	3 cut(s)	177, 1162, 1288
Bse21I	CCTNAGG	1 cut(s)	367
BseAI	TCCGGA	1 cut(s)	693
BseBI	CCWGG	1 cut(s)	1176
BseDI	CCNNGG	6 cut(s)	486, 544, 621, 846, 1174, 1257
BseGI	GGATG	6 cut(s)	312, 501, 687, 702, 718, 840
BseLI	CCNNNNNNNGG	6 cut(s)	47, 574, 627, 697, 852, 1157
BseMII	CTCAG	5 cut(s)	412, 949, 958, 981, 1242
BseNI	ACTGG	3 cut(s)	177, 1162, 1288
BseX3I	CGGCCG	2 cut(s)	594, 711
BseXI	GCAGC	2 cut(s)	726, 969
BseYI	CCCAGC	2 cut(s)	114, 1463
BsgI	GTGCAG	1 cut(s)	1049
Bsh1285I	CGRYCG	3 cut(s)	573, 597, 714
BshFI	GGCC	9 cut(s)	5, 596, 627, 713, 782, 845, 1113, 1166, 1179
BshNI	GGYRCC	3 cut(s)	548, 617, 1457
BsiEI	CGRYCG	3 cut(s)	573, 597, 714
BsiHKAI	GWGCWC	1 cut(s)	970
BsiHKCI	CYCGRG	1 cut(s)	518
BslFI	GGGAC	2 cut(s)	80, 323
BslI	CCNNNNNNNGG	6 cut(s)	47, 574, 627, 697, 852, 1157
BsmAI	GTCTC	4 cut(s)	385, 654, 791, 1247
BsmBI	CGTCTC	1 cut(s)	385
BsmFI	GGGAC	2 cut(s)	80, 323
BsnI	GGCC	9 cut(s)	5, 596, 627, 713, 782, 845, 1113, 1166, 1179
Bso31I	GGTCTC	1 cut(s)	1247
BsoBI	CYCGRG	1 cut(s)	518
Bsp119I	TTCGAA	1 cut(s)	828
Bsp1286I	GDGCHC	1 cut(s)	970
Bsp13I	TCCGGA	1 cut(s)	693
Bsp1407I	TGTACA	1 cut(s)	1320
Bsp143I	GATC	7 cut(s)	33, 414, 534, 672, 774, 1140, 1288
BspANI	GGCC	9 cut(s)	5, 596, 627, 713, 782, 845, 1113, 1166, 1179
BspCNI	CTCAG	5 cut(s)	411, 948, 957, 982, 1243
BspEI	TCCGGA	1 cut(s)	693
BspLI	GGNNCC	5 cut(s)	550, 619, 659, 702, 1459
BspMI	ACCTGC	1 cut(s)	1445
BspPI	GGATC	2 cut(s)	529, 769
BspT104I	TTCGAA	1 cut(s)	828
BspT107I	GGYRCC	3 cut(s)	548, 617, 1457
BspTNI	GGTCTC	1 cut(s)	1247
BsrBI	CCGCTC	3 cut(s)	473, 817, 973
BsrFI	RCCGGY	1 cut(s)	874
BsrGI	TGTACA	1 cut(s)	1320
BsrI	ACTGG	3 cut(s)	177, 1162, 1288
BssAI	RCCGGY	1 cut(s)	874
BssECI	CCNNGG	6 cut(s)	486, 544, 621, 846, 1174, 1257
BssMI	GATC	7 cut(s)	33, 414, 534, 672, 774, 1140, 1288
BssNI	GRCGYC	2 cut(s)	198, 372
BssT1I	CCWWGG	2 cut(s)	486, 1257
Bst2UI	CCWGG	1 cut(s)	1176
Bst6I	CTCTTC	1 cut(s)	1080
BstACI	GRCGYC	2 cut(s)	198, 372
BstAUI	TGTACA	1 cut(s)	1320
BstBAI	YACGTR	1 cut(s)	754
BstBI	TTCGAA	1 cut(s)	828
BstC8I	GCNNGC	4 cut(s)	223, 687, 941, 1190
BstDEI	CTNAG	7 cut(s)	367, 398, 921, 935, 944, 990, 1251
BstDSI	CCRYGG	2 cut(s)	621, 846
BstF5I	GGATG	6 cut(s)	312, 501, 687, 702, 718, 840
BstKTI	GATC	7 cut(s)	36, 417, 537, 675, 777, 1143, 1291
BstMAI	GTCTC	4 cut(s)	385, 654, 791, 1247
BstMBI	GATC	7 cut(s)	33, 414, 534, 672, 774, 1140, 1288
BstMCI	CGRYCG	3 cut(s)	573, 597, 714
BstMWI	GCNNNNNNNGC	8 cut(s)	464, 624, 674, 739, 880, 1088, 1185, 1198
BstNI	CCWGG	1 cut(s)	1176
BstNSI	RCATGY	1 cut(s)	874
BstSCI	CCNGG	7 cut(s)	544, 567, 627, 677, 708, 777, 1174
BstSFI	CTRYAG	1 cut(s)	1107
BstV1I	GCAGC	2 cut(s)	726, 969
BstZI	CGGCCG	2 cut(s)	594, 711
Bsu36I	CCTNAGG	1 cut(s)	367
BsuRI	GGCC	9 cut(s)	5, 596, 627, 713, 782, 845, 1113, 1166, 1179
BtgI	CCRYGG	2 cut(s)	621, 846
BtrI	CACGTC	1 cut(s)	337
BtsCI	GGATG	6 cut(s)	312, 501, 687, 702, 718, 840
BveI	ACCTGC	1 cut(s)	1445
Cac8I	GCNNGC	4 cut(s)	223, 687, 941, 1190
CaiI	CAGNNNCTG	2 cut(s)	1082, 1157
Cfr10I	RCCGGY	1 cut(s)	874
Cfr13I	GGNCC	3 cut(s)	625, 780, 1205
CseI	GACGC	3 cut(s)	206, 361, 874
Csp6I	GTAC	6 cut(s)	180, 607, 1321, 1354, 1436, 1458
CviAII	CATG	3 cut(s)	532, 769, 871
CviQI	GTAC	6 cut(s)	180, 607, 1321, 1354, 1436, 1458
DdeI	CTNAG	7 cut(s)	367, 398, 921, 935, 944, 990, 1251
DpnI	GATC	7 cut(s)	35, 416, 536, 674, 776, 1142, 1290
DpnII	GATC	7 cut(s)	33, 414, 534, 672, 774, 1140, 1288
EaeI	YGGCCR	4 cut(s)	3, 594, 711, 1177
EagI	CGGCCG	2 cut(s)	594, 711
Eam1104I	CTCTTC	1 cut(s)	1080
EarI	CTCTTC	1 cut(s)	1080
EciI	GGCGGA	4 cut(s)	74, 151, 208, 978
Ecl136II	GAGCTC	1 cut(s)	968
EclXI	CGGCCG	2 cut(s)	594, 711
Eco130I	CCWWGG	2 cut(s)	486, 1257
Eco147I	AGGCCT	1 cut(s)	1166
Eco24I	GRGCYC	1 cut(s)	970
Eco31I	GGTCTC	1 cut(s)	1247
Eco47I	GGWCC	1 cut(s)	1205
Eco52I	CGGCCG	2 cut(s)	594, 711
Eco53kI	GAGCTC	1 cut(s)	968
Eco57I	CTGAAG	1 cut(s)	1104
Eco72I	CACGTG	1 cut(s)	754
Eco81I	CCTNAGG	1 cut(s)	367
Eco88I	CYCGRG	1 cut(s)	518
EcoICRI	GAGCTC	1 cut(s)	968
EcoO109I	RGGNCCY	1 cut(s)	1205
EcoRII	CCWGG	1 cut(s)	1174
EcoT14I	CCWWGG	2 cut(s)	486, 1257
EcoT38I	GRGCYC	1 cut(s)	970
ErhI	CCWWGG	2 cut(s)	486, 1257
Esp3I	CGTCTC	1 cut(s)	385
FaeI	CATG	3 cut(s)	535, 772, 874
FaiI	YATR	9 cut(s)	92, 533, 665, 770, 872, 1038, 1101, 1130, 1227
FalI	AAGNNNNNCTT	2 cut(s)	35, 67
FaqI	GGGAC	2 cut(s)	80, 323
FatI	CATG	3 cut(s)	531, 768, 870
FauI	CCCGC	4 cut(s)	230, 260, 394, 451
Fnu4HI	GCNGC	8 cut(s)	597, 740, 743, 884, 887, 958, 961, 1114
FokI	GGATG	6 cut(s)	299, 488, 694, 705, 709, 847
FriOI	GRGCYC	1 cut(s)	970
Fsp4HI	GCNGC	8 cut(s)	597, 740, 743, 884, 887, 958, 961, 1114
GluI	GCNGC	8 cut(s)	597, 740, 743, 884, 887, 958, 961, 1114
GsaI	CCCAGC	2 cut(s)	118, 1467
GsuI	CTGGAG	3 cut(s)	160, 1074, 1179
HaeIII	GGCC	9 cut(s)	5, 596, 627, 713, 782, 845, 1113, 1166, 1179
HgaI	GACGC	3 cut(s)	206, 361, 874
Hin1I	GRCGYC	2 cut(s)	198, 372
Hin1II	CATG	3 cut(s)	535, 772, 874
HincII	GTYRAC	2 cut(s)	580, 1147
HindII	GTYRAC	2 cut(s)	580, 1147
HinfI	GANTC	4 cut(s)	432, 512, 799, 1049
HpaI	GTTAAC	1 cut(s)	580
HphI	GGTGA	5 cut(s)	427, 644, 874, 1298, 1381
Hpy166II	GTNNAC	3 cut(s)	580, 1147, 1330
Hpy188I	TCNGA	7 cut(s)	33, 61, 431, 810, 903, 913, 1005
Hpy188III	TCNNGA	4 cut(s)	694, 1053, 1068, 1442
Hpy8I	GTNNAC	3 cut(s)	580, 1147, 1330
Hpy99I	CGWCG	4 cut(s)	200, 377, 380, 413
HpyAV	CCTTC	6 cut(s)	82, 336, 463, 824, 835, 1213
HpyCH4IV	ACGT	3 cut(s)	336, 753, 1438
HpyCH4V	TGCA	3 cut(s)	685, 1030, 1454
HpyF10VI	GCNNNNNNNGC	8 cut(s)	464, 624, 674, 739, 880, 1088, 1185, 1198
HpyF3I	CTNAG	7 cut(s)	367, 398, 921, 935, 944, 990, 1251
HpySE526I	ACGT	3 cut(s)	336, 753, 1438
Hsp92I	GRCGYC	2 cut(s)	198, 372
Hsp92II	CATG	3 cut(s)	535, 772, 874
Kpn2I	TCCGGA	1 cut(s)	693
KpnI	GGTACC	1 cut(s)	1461
KspAI	GTTAAC	1 cut(s)	580
Kzo9I	GATC	7 cut(s)	33, 414, 534, 672, 774, 1140, 1288
LmnI	GCTCC	7 cut(s)	62, 407, 432, 486, 814, 965, 973
Lsp1109I	GCAGC	2 cut(s)	726, 969
LweI	GCATC	4 cut(s)	672, 720, 727, 1069
MaeII	ACGT	3 cut(s)	336, 753, 1438
MaeIII	GTNAC	2 cut(s)	563, 862
MalI	GATC	7 cut(s)	35, 416, 536, 674, 776, 1142, 1290
MbiI	CCGCTC	3 cut(s)	473, 817, 973
MboI	GATC	7 cut(s)	33, 414, 534, 672, 774, 1140, 1288
MboII	GAAGA	2 cut(s)	757, 1097
MhlI	GDGCHC	1 cut(s)	970
MlsI	TGGCCA	1 cut(s)	1179
MluCI	AATT	4 cut(s)	1007, 1343, 1408, 1449
MluNI	TGGCCA	1 cut(s)	1179
MlyI	GAGTC	3 cut(s)	426, 506, 793
MmeI	TCCRAC	2 cut(s)	454, 562
Mox20I	TGGCCA	1 cut(s)	1179
MroI	TCCGGA	1 cut(s)	693
MroXI	GAANNNNTTC	1 cut(s)	71
MscI	TGGCCA	1 cut(s)	1179
MseI	TTAA	4 cut(s)	579, 1277, 1337, 1391
MslI	CAYNNNNRTG	1 cut(s)	875
Msp20I	TGGCCA	1 cut(s)	1179
MspA1I	CMGCKG	4 cut(s)	745, 889, 960, 1467
MspR9I	CCNGG	7 cut(s)	546, 569, 629, 679, 710, 779, 1176
MvaI	CCWGG	1 cut(s)	1176
MwoI	GCNNNNNNNGC	8 cut(s)	464, 624, 674, 739, 880, 1088, 1185, 1198
NciI	CCSGG	6 cut(s)	546, 569, 629, 679, 710, 779
NdeII	GATC	7 cut(s)	33, 414, 534, 672, 774, 1140, 1288
NlaIII	CATG	3 cut(s)	535, 772, 874
NlaIV	GGNNCC	5 cut(s)	550, 619, 659, 702, 1459
NmeAIII	GCCGAG	4 cut(s)	31, 739, 933, 954
NmuCI	GTSAC	1 cut(s)	862
NspI	RCATGY	1 cut(s)	874
NspV	TTCGAA	1 cut(s)	828
PceI	AGGCCT	1 cut(s)	1166
PcsI	WCGNNNNNNNCGW	2 cut(s)	369, 516
PdmI	GAANNNNTTC	1 cut(s)	71
PfeI	GAWTC	1 cut(s)	1049
PflFI	GACNNNGTC	1 cut(s)	907
PflMI	CCANNNNNTGG	1 cut(s)	1157
PkrI	GCNGC	8 cut(s)	598, 741, 744, 885, 888, 959, 962, 1115
PleI	GAGTC	3 cut(s)	426, 506, 793
PmaCI	CACGTG	1 cut(s)	754
PmlI	CACGTG	1 cut(s)	754
PpsI	GAGTC	3 cut(s)	426, 506, 793
Ppu21I	YACGTR	1 cut(s)	754
PpuMI	RGGWCCY	1 cut(s)	1205
Psp124BI	GAGCTC	1 cut(s)	970
Psp5II	RGGWCCY	1 cut(s)	1205
Psp6I	CCWGG	1 cut(s)	1174
PspCI	CACGTG	1 cut(s)	754
PspFI	CCCAGC	2 cut(s)	114, 1463
PspGI	CCWGG	1 cut(s)	1174
PspN4I	GGNNCC	5 cut(s)	550, 619, 659, 702, 1459
PspPI	GGNCC	3 cut(s)	625, 780, 1205
PspPPI	RGGWCCY	1 cut(s)	1205
PstNI	CAGNNNCTG	2 cut(s)	1082, 1157
PsyI	GACNNNGTC	1 cut(s)	907
PvuII	CAGCTG	1 cut(s)	1467
RsaI	GTAC	6 cut(s)	181, 608, 1322, 1355, 1437, 1459
RsaNI	GTAC	6 cut(s)	180, 607, 1321, 1354, 1436, 1458
RseI	CAYNNNNRTG	1 cut(s)	875
SacI	GAGCTC	1 cut(s)	970
SaqAI	TTAA	4 cut(s)	579, 1277, 1337, 1391
SatI	GCNGC	8 cut(s)	597, 740, 743, 884, 887, 958, 961, 1114
Sau3AI	GATC	7 cut(s)	33, 414, 534, 672, 774, 1140, 1288
Sau96I	GGNCC	3 cut(s)	625, 780, 1205
SchI	GAGTC	3 cut(s)	426, 506, 793
ScrFI	CCNGG	7 cut(s)	546, 569, 629, 679, 710, 779, 1176
SduI	GDGCHC	1 cut(s)	970
SfaNI	GCATC	4 cut(s)	672, 720, 727, 1069
SfcI	CTRYAG	1 cut(s)	1107
SfuI	TTCGAA	1 cut(s)	828
SinI	GGWCC	1 cut(s)	1205
SmiMI	CAYNNNNRTG	1 cut(s)	875
Sse9I	AATT	4 cut(s)	1007, 1343, 1408, 1449
SseBI	AGGCCT	1 cut(s)	1166
SstI	GAGCTC	1 cut(s)	970
StuI	AGGCCT	1 cut(s)	1166
StyD4I	CCNGG	7 cut(s)	544, 567, 627, 677, 708, 777, 1174
StyI	CCWWGG	2 cut(s)	486, 1257
TaiI	ACGT	3 cut(s)	339, 756, 1441
TaqI	TCGA	7 cut(s)	195, 510, 573, 728, 822, 828, 1067
TaqII	GACCGA	1 cut(s)	602
TasI	AATT	4 cut(s)	1007, 1343, 1408, 1449
TatI	WGTACW	3 cut(s)	606, 1320, 1353
TauI	GCSGC	6 cut(s)	599, 745, 886, 889, 963, 1116
TfiI	GAWTC	1 cut(s)	1049
Tru1I	TTAA	4 cut(s)	579, 1277, 1337, 1391
Tru9I	TTAA	4 cut(s)	579, 1277, 1337, 1391
TseFI	GTSAC	1 cut(s)	862
TseI	GCWGC	2 cut(s)	739, 957
Tsp45I	GTSAC	1 cut(s)	862
TspDTI	ATGAA	3 cut(s)	757, 988, 1232
TspGWI	ACGGA	1 cut(s)	827
Tth111I	GACNNNGTC	1 cut(s)	907
Van91I	CCANNNNNTGG	1 cut(s)	1157
VpaK11BI	GGWCC	1 cut(s)	1205
XapI	RAATTY	2 cut(s)	1007, 1408
XceI	RCATGY	1 cut(s)	874
XmnI	GAANNNNTTC	1 cut(s)	71

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.