Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0001900

Physical Location & Seq

Genomic Coordinates Reverse (-)

61569564 .. 61572230

Gene Structure 2667 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG303200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGGCCGATCACAACACTACCAGCATTGATCCCAACAGCGGCTTCTGCTCAAAGACCAAAACATTCCACAGTCTCAGGCCGAAAGCCCCGCTCCCCTCCGAAACGACGCCGCTTTCTATCACTCACTACATTTTCTCCCACCTCCAAGCTTATCCTCCATCGCCCTCCACCCCGGCACTCCTCGACCCCGCCACGCGCCGCCACGTTCTCTACCCCGAGTTCACGCGCCGCGCCAAAACCCTAGCCGCCGCGCTAGAATCGCAACTCAACCTCTCCAATGGCCACACCGCCTTCGTCATCTCCCCCAATTCGCTCGACCTCCCCATCCTCTACTTCTCTCTCCTCTCCCTCGGCGTAACCGTCTCTCCGTCAAACCCGGCCAGCACCACTCCCGAGATTTCCCGCCAACTCCACCTCAGCAGACCCGTCATCGCCTTCGCCACCTCCGCCACCGCTCACAAACTCCCCGACTCCCTCCAATACGGCGTCGTACTCCTCGACTCCCCCGAATTCCAGTCCATGATGACGTGTGCTCCGGCGCCGGAGCTTCCACGGGTCCGCTTCAGCCAATCCCACACCGCCGCGGTCCTCTACTCGTCGGGGACCACCGGGGCCGTCAAAGGCGTGGAGTTGACCCACCGTAACTGGATTTCCGTGCTGGCGGCGGCGTTCGCGGTTCGGAATCCGACGGCTCCGCCAGCTGTCATGCTCTGCGCGGTGCCGTTCTTCCACGTGTACGGCTTCGGCGTCTGCATGCGGGTGTTGGGGTTCGGCGAGACGCTGGCGTCGATTTCGGGGAGGTTTGATCTGAGAGCGACGCTGAGGGCCGCCGAGGAGTTCAGGATCAGCCACGTGTCGTGGGCCCCGCCGGTGGTGGCGGCGGTGGTGAAGCTCGGGAGCGAGATCGACGGCTACGATCTGAGCTCGCTGCAGGTCGTCGCCTGCGGCGGTGCTCCGCTTGCGAAGAGTGTCATCGATAAGCTCAAGAAACGCCTTCCTAACGTGCAAGTGGCACAGGGATATGGGCTGACAGAGACAACGGGTCGAGTGTTTGGCACGGTAGGCCCAAATGAGACCCGAGTAGAAGGAGCTACTGGAAAGCTGATGTCAAATTTTGAAGCCAAGATTGTTGACCCTGAGACCGGCATTGCCTTGCCTCCTCTAATGACTGGAGAGCTTTGGCTTAGGGGACCAATTATAATGAAAGGTTACATTGGTGATGAAGAAGCAAATGCTATAACTATGGACACTGAAGGATGGTATCCTGATGAGGAAGCAGGTCAAGTACCAATGGCCTTTGTGGTCAGGCGCCTAGGAAGTGTCGTCAGTGAATCGCAGGTGAAGGATTTTATTGCCAAACAGGTTGCACCGTATAAGAAAATACGACGAGTAGCATTCATCAATGAAGTACCAAAGAGTGCACAAGGTAAATTAATGAGGAAGGAATTAGTCAAACTTGCATTATCCAAGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004321 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0008150 GO:0008152 GO:0009058 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0016408 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

491

Amino Acids

53.02

Weight (kDa)

9.13

Isoelectric Point (pI)

46.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	55 - 404	1.5e-69	AMP-binding enzyme
AMP-binding_C	PF13193	422 - 477	5e-09	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63380
fragaria_vesca	FvH4_4g24170 FvH4_5g07750 FvH4_5g07750 FvH4_5g07750
malus_domestica	MD06G1147300.v1.1 MD06G1147500.v1.1 MD13G1113700.v1.1 MD14G1161200.v1.1 MD14G1161300.v1.1 MD16G1112900.v1.1 MD16G1113000.v1.1
prunus_persica	Prupe.1G232500_v2.0.a1 Prupe.5G154000_v2.0.a1 Prupe.5G154100_v2.0.a1
pyrus_communis	pycom06g13680 pycom06g13690 pycom13g09900 pycom14g13410 pycom16g09570 pycom16g09580
rosa_chinensis	RchiOBHm_Chr4g0430951 RchiOBHm_Chr7g0190671 RchiOBHm_Chr7g0190681
rosa_laevigata	RLG00000004504 RLG00000006935
rosa_multiflora	Rmu_co8020444.1_g000001 Rmu_sc0006263.1_g000015 Rmu_sc0006709.1_g000003 Rmu_sc0013571.1_g000005
rosa_roxburghii	Rroxscaffold_3G00264410 Rroxscaffold_5G00372640
rosa_rugosa	Rorug04G0247400 Rorug06G0506300 Rorug06G0506400
rosa_samantha	Rh4AG303200 Rh4AG304100 Rh4BG311400 Rh4CG327700 Rh4DG307500 Rh7AG112900 Rh7BG115400 Rh7CG117900 Rh7DG116800
rosa_wichuraiana	Rw4G026360 Rw7G009850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1199
AarI	CACCTGC	1 cut(s)	1327
AasI	GACNNNNNNGTC	1 cut(s)	784
Acc36I	ACCTGC	3 cut(s)	922, 1268, 1327
AccB1I	GGYRCC	3 cut(s)	538, 718, 1308
AccBSI	CCGCTC	2 cut(s)	91, 455
AccII	CGCG	7 cut(s)	196, 226, 231, 251, 584, 674, 716
AclWI	GGATC	2 cut(s)	23, 851
AcoI	YGGCCR	3 cut(s)	3, 280, 378
AcsI	RAATTY	2 cut(s)	509, 1111
AcuI	CTGAAG	2 cut(s)	547, 1272
AcvI	CACGTG	2 cut(s)	733, 853
AcyI	GRCGYC	6 cut(s)	107, 486, 539, 747, 785, 1309
AfaI	GTAC	4 cut(s)	492, 737, 1287, 1410
AfiI	CCNNNNNNNGG	3 cut(s)	38, 871, 1142
AflIII	ACRYGT	3 cut(s)	527, 732, 852
AgsI	TTSAA	1 cut(s)	1118
AhdI	GACNNNNNGTC	1 cut(s)	1041
AjiI	CACGTC	1 cut(s)	528
AjuI	GAANNNNNNNTTGG	2 cut(s)	26, 58
AluBI	AGCT	9 cut(s)	149, 547, 701, 892, 924, 982, 1091, 1102, 1177
AluI	AGCT	9 cut(s)	149, 547, 701, 892, 924, 982, 1091, 1102, 1177
Alw21I	GWGCWC	4 cut(s)	535, 926, 955, 1423
Alw26I	GTCTC	6 cut(s)	77, 367, 770, 1028, 1067, 1133
Alw44I	GTGCAC	1 cut(s)	1419
AlwI	GGATC	2 cut(s)	23, 851
Ama87I	CYCGRG	4 cut(s)	215, 392, 893, 1077
AoxI	GGCC	9 cut(s)	3, 77, 280, 378, 612, 825, 861, 1063, 1293
ApaI	GGGCCC	1 cut(s)	865
ApaLI	GTGCAC	1 cut(s)	1419
ApeKI	GCWGC	1 cut(s)	928
ApoI	RAATTY	2 cut(s)	509, 1111
AseI	ATTAAT	1 cut(s)	1433
AspA2I	CCTAGG	1 cut(s)	1312
AspLEI	GCGC	7 cut(s)	198, 228, 233, 253, 541, 716, 1311
AspS9I	GGNCC	9 cut(s)	556, 586, 603, 612, 825, 861, 862, 1064, 1190
AsuC2I	CCSGG	3 cut(s)	173, 377, 610
AsuHPI	GGTGA	3 cut(s)	898, 1229, 1351
AvaI	CYCGRG	4 cut(s)	215, 392, 893, 1077
AvaII	GGWCC	4 cut(s)	556, 586, 603, 1190
AvrII	CCTAGG	1 cut(s)	1312
BaeGI	GKGCMC	2 cut(s)	865, 1423
BalI	TGGCCA	1 cut(s)	282
BanI	GGYRCC	3 cut(s)	538, 718, 1308
BanII	GRGCYC	2 cut(s)	865, 926
BbrPI	CACGTG	2 cut(s)	733, 853
Bbv12I	GWGCWC	4 cut(s)	535, 926, 955, 1423
BbvCI	CCTCAGC	2 cut(s)	416, 821
BbvI	GCAGC	1 cut(s)	915
BccI	CCATC	3 cut(s)	166, 332, 1251
BceAI	ACGGC	6 cut(s)	499, 599, 705, 706, 754, 925
BciVI	GTATCC	1 cut(s)	1272
BcnI	CCSGG	3 cut(s)	173, 377, 610
BcoDI	GTCTC	6 cut(s)	77, 367, 770, 1028, 1067, 1133
BfaI	CTAG	3 cut(s)	242, 254, 1313
BfmI	CTRYAG	1 cut(s)	929
BfoI	RGCGCY	2 cut(s)	542, 1312
BfuAI	ACCTGC	3 cut(s)	922, 1268, 1327
BfuI	GTATCC	1 cut(s)	1272
BlnI	CCTAGG	1 cut(s)	1312
Bme1390I	CCNGG	3 cut(s)	173, 377, 610
Bme18I	GGWCC	4 cut(s)	556, 586, 603, 1190
BmeRI	GACNNNNNGTC	1 cut(s)	1041
BmeT110I	CYCGRG	4 cut(s)	215, 392, 893, 1077
BmgBI	CACGTC	1 cut(s)	528
BmgT120I	GGNCC	9 cut(s)	556, 586, 603, 612, 825, 861, 862, 1064, 1190
BmrFI	CCNGG	3 cut(s)	173, 377, 610
BpmI	CTGGAG	1 cut(s)	1191
Bpu10I	CCTNAGC	3 cut(s)	416, 821, 1184
BpuEI	CTTGAG	1 cut(s)	968
BpuMI	CCSGG	3 cut(s)	173, 377, 610
Bsa29I	ATCGAT	1 cut(s)	975
BsaAI	YACGTR	2 cut(s)	733, 853
BsaHI	GRCGYC	6 cut(s)	107, 486, 539, 747, 785, 1309
BsaI	GGTCTC	2 cut(s)	1067, 1133
BsaJI	CCNNGG	7 cut(s)	171, 349, 551, 582, 609, 831, 1312
BsaXI	ACNNNNNCTCC	6 cut(s)	119, 149, 349, 379, 517, 547
Bsc4I	CCNNNNNNNGG	3 cut(s)	38, 871, 1142
Bse118I	RCCGGY	2 cut(s)	868, 1142
Bse1I	ACTGG	4 cut(s)	514, 650, 1099, 1174
Bse3DI	GCAATG	1 cut(s)	1146
BseCI	ATCGAT	1 cut(s)	975
BseDI	CCNNGG	7 cut(s)	171, 349, 551, 582, 609, 831, 1312
BseGI	GGATG	2 cut(s)	324, 1262
BseLI	CCNNNNNNNGG	3 cut(s)	38, 871, 1142
BseMI	GCAATG	1 cut(s)	1146
BseMII	CTCAG	6 cut(s)	88, 430, 800, 812, 911, 1128
BseNI	ACTGG	4 cut(s)	514, 650, 1099, 1174
BseRI	GAGGAG	5 cut(s)	170, 332, 485, 848, 1149
BseSI	GKGCMC	2 cut(s)	865, 1423
BseXI	GCAGC	1 cut(s)	915
Bsh1236I	CGCG	7 cut(s)	196, 226, 231, 251, 584, 674, 716
BshFI	GGCC	9 cut(s)	5, 79, 282, 380, 614, 827, 863, 1065, 1295
BshNI	GGYRCC	3 cut(s)	538, 718, 1308
BshVI	ATCGAT	1 cut(s)	975
BsiHKAI	GWGCWC	4 cut(s)	535, 926, 955, 1423
BsiHKCI	CYCGRG	4 cut(s)	215, 392, 893, 1077
BsiSI	CCGG	7 cut(s)	173, 377, 536, 542, 609, 869, 1143
BslFI	GGGAC	2 cut(s)	616, 1203
BslI	CCNNNNNNNGG	3 cut(s)	38, 871, 1142
BsmAI	GTCTC	6 cut(s)	77, 367, 770, 1028, 1067, 1133
BsmBI	CGTCTC	2 cut(s)	367, 770
BsmFI	GGGAC	2 cut(s)	616, 1203
BsmI	GAATGC	1 cut(s)	1394
BsnI	GGCC	9 cut(s)	5, 79, 282, 380, 614, 827, 863, 1065, 1295
Bso31I	GGTCTC	2 cut(s)	1067, 1133
BsoBI	CYCGRG	4 cut(s)	215, 392, 893, 1077
Bsp120I	GGGCCC	1 cut(s)	861
Bsp1286I	GDGCHC	5 cut(s)	535, 865, 926, 955, 1423
Bsp143I	GATC	6 cut(s)	7, 28, 805, 843, 903, 916
BspANI	GGCC	9 cut(s)	5, 79, 282, 380, 614, 827, 863, 1065, 1295
BspCNI	CTCAG	6 cut(s)	87, 429, 801, 813, 912, 1129
BspDI	ATCGAT	1 cut(s)	975
BspFNI	CGCG	7 cut(s)	196, 226, 231, 251, 584, 674, 716
BspMAI	CTGCAG	1 cut(s)	933
BspMI	ACCTGC	3 cut(s)	922, 1268, 1327
BspPI	GGATC	2 cut(s)	23, 851
BspT107I	GGYRCC	3 cut(s)	538, 718, 1308
BspTNI	GGTCTC	2 cut(s)	1067, 1133
BsrBI	CCGCTC	2 cut(s)	91, 455
BsrDI	GCAATG	1 cut(s)	1146
BsrFI	RCCGGY	2 cut(s)	868, 1142
BsrI	ACTGG	4 cut(s)	514, 650, 1099, 1174
BssAI	RCCGGY	2 cut(s)	868, 1142
BssECI	CCNNGG	7 cut(s)	171, 349, 551, 582, 609, 831, 1312
BssMI	GATC	6 cut(s)	7, 28, 805, 843, 903, 916
BssNI	GRCGYC	6 cut(s)	107, 486, 539, 747, 785, 1309
BssT1I	CCWWGG	1 cut(s)	1312
Bst4CI	ACNGT	5 cut(s)	71, 361, 641, 1060, 1371
Bst6I	CTCTTC	1 cut(s)	959
BstACI	GRCGYC	6 cut(s)	107, 486, 539, 747, 785, 1309
BstBAI	YACGTR	2 cut(s)	733, 853
BstC8I	GCNNGC	8 cut(s)	382, 660, 699, 755, 783, 926, 943, 960
BstDEI	CTNAG	7 cut(s)	74, 416, 809, 821, 920, 1137, 1184
BstDSI	CCRYGG	2 cut(s)	551, 582
BstF5I	GGATG	2 cut(s)	324, 1262
BstFNI	CGCG	7 cut(s)	196, 226, 231, 251, 584, 674, 716
BstH2I	RGCGCY	2 cut(s)	542, 1312
BstHHI	GCGC	7 cut(s)	198, 228, 233, 253, 541, 716, 1311
BstKTI	GATC	6 cut(s)	10, 31, 808, 846, 906, 919
BstMAI	GTCTC	6 cut(s)	77, 367, 770, 1028, 1067, 1133
BstMBI	GATC	6 cut(s)	7, 28, 805, 843, 903, 916
BstMWI	GCNNNNNNNGC	7 cut(s)	45, 259, 446, 671, 698, 959, 1062
BstNSI	RCATGY	1 cut(s)	757
BstSCI	CCNGG	3 cut(s)	171, 375, 608
BstSFI	CTRYAG	1 cut(s)	929
BstSLI	GKGCMC	2 cut(s)	865, 1423
BstUI	CGCG	7 cut(s)	196, 226, 231, 251, 584, 674, 716
BstV1I	GCAGC	1 cut(s)	915
Bsu15I	ATCGAT	1 cut(s)	975
BsuI	GTATCC	1 cut(s)	1272
BsuRI	GGCC	9 cut(s)	5, 79, 282, 380, 614, 827, 863, 1065, 1295
BsuTUI	ATCGAT	1 cut(s)	975
BtgI	CCRYGG	2 cut(s)	551, 582
BtgZI	GCGATG	2 cut(s)	144, 415
BtrI	CACGTC	1 cut(s)	528
BtsCI	GGATG	2 cut(s)	324, 1262
BtsIMutI	CAGTG	2 cut(s)	1248, 1333
BveI	ACCTGC	3 cut(s)	922, 1268, 1327
Cac8I	GCNNGC	8 cut(s)	382, 660, 699, 755, 783, 926, 943, 960
CfoI	GCGC	7 cut(s)	198, 228, 233, 253, 541, 716, 1311
Cfr10I	RCCGGY	2 cut(s)	868, 1142
Cfr13I	GGNCC	9 cut(s)	556, 586, 603, 612, 825, 861, 862, 1064, 1190
Cfr42I	CCGCGG	1 cut(s)	585
ClaI	ATCGAT	1 cut(s)	975
CseI	GACGC	6 cut(s)	115, 475, 736, 774, 787, 826
Csp6I	GTAC	4 cut(s)	491, 736, 1286, 1409
CviAII	CATG	3 cut(s)	520, 706, 754
CviQI	GTAC	4 cut(s)	491, 736, 1286, 1409
DdeI	CTNAG	7 cut(s)	74, 416, 809, 821, 920, 1137, 1184
DinI	GGCGCC	2 cut(s)	540, 1310
DpnI	GATC	6 cut(s)	9, 30, 807, 845, 905, 918
DpnII	GATC	6 cut(s)	7, 28, 805, 843, 903, 916
DrdI	GACNNNNNNGTC	1 cut(s)	784
DriI	GACNNNNNGTC	1 cut(s)	1041
DseDI	GACNNNNNNGTC	1 cut(s)	784
EaeI	YGGCCR	3 cut(s)	3, 280, 378
Eam1104I	CTCTTC	1 cut(s)	959
Eam1105I	GACNNNNNGTC	1 cut(s)	1041
EarI	CTCTTC	1 cut(s)	959
EciI	GGCGGA	2 cut(s)	436, 684
Ecl136II	GAGCTC	1 cut(s)	924
Eco130I	CCWWGG	1 cut(s)	1312
Eco24I	GRGCYC	2 cut(s)	865, 926
Eco31I	GGTCTC	2 cut(s)	1067, 1133
Eco47I	GGWCC	4 cut(s)	556, 586, 603, 1190
Eco53kI	GAGCTC	1 cut(s)	924
Eco57I	CTGAAG	2 cut(s)	547, 1272
Eco72I	CACGTG	2 cut(s)	733, 853
Eco88I	CYCGRG	4 cut(s)	215, 392, 893, 1077
EcoICRI	GAGCTC	1 cut(s)	924
EcoO109I	RGGNCCY	1 cut(s)	862
EcoRI	GAATTC	1 cut(s)	509
EcoT14I	CCWWGG	1 cut(s)	1312
EcoT38I	GRGCYC	2 cut(s)	865, 926
EgeI	GGCGCC	2 cut(s)	540, 1310
EheI	GGCGCC	2 cut(s)	540, 1310
ErhI	CCWWGG	1 cut(s)	1312
Esp3I	CGTCTC	2 cut(s)	367, 770
FaeI	CATG	3 cut(s)	523, 709, 757
FaiI	YATR	9 cut(s)	521, 707, 755, 1023, 1199, 1238, 1244, 1374, 1474
FaqI	GGGAC	2 cut(s)	616, 1203
FatI	CATG	3 cut(s)	519, 705, 753
FauI	CCCGC	5 cut(s)	96, 196, 410, 750, 873
FokI	GGATG	2 cut(s)	311, 1269
FriOI	GRGCYC	2 cut(s)	865, 926
FspBI	CTAG	3 cut(s)	242, 254, 1313
GlaI	GCGC	7 cut(s)	197, 227, 232, 252, 540, 715, 1310
GsuI	CTGGAG	1 cut(s)	1191
HaeII	RGCGCY	2 cut(s)	542, 1312
HaeIII	GGCC	9 cut(s)	5, 79, 282, 380, 614, 827, 863, 1065, 1295
HapII	CCGG	7 cut(s)	173, 377, 536, 542, 609, 869, 1143
HgaI	GACGC	6 cut(s)	115, 475, 736, 774, 787, 826
HhaI	GCGC	7 cut(s)	198, 228, 233, 253, 541, 716, 1311
Hin1I	GRCGYC	6 cut(s)	107, 486, 539, 747, 785, 1309
Hin1II	CATG	3 cut(s)	523, 709, 757
Hin6I	GCGC	7 cut(s)	196, 226, 231, 251, 539, 714, 1309
HinP1I	GCGC	7 cut(s)	196, 226, 231, 251, 539, 714, 1309
HincII	GTYRAC	2 cut(s)	633, 1132
HindII	GTYRAC	2 cut(s)	633, 1132
HindIII	AAGCTT	1 cut(s)	147
HinfI	GANTC	5 cut(s)	257, 470, 500, 682, 1331
HpaII	CCGG	7 cut(s)	173, 377, 536, 542, 609, 869, 1143
HphI	GGTGA	3 cut(s)	898, 1229, 1351
Hpy166II	GTNNAC	5 cut(s)	222, 633, 736, 1132, 1421
Hpy188I	TCNGA	5 cut(s)	100, 681, 687, 810, 921
Hpy188III	TCNNGA	5 cut(s)	392, 841, 895, 985, 1265
Hpy8I	GTNNAC	5 cut(s)	222, 633, 736, 1132, 1421
Hpy99I	CGWCG	9 cut(s)	109, 491, 601, 691, 790, 820, 911, 941, 1389
HpyAV	CCTTC	7 cut(s)	301, 445, 1004, 1079, 1247, 1336, 1435
HpyCH4III	ACNGT	5 cut(s)	71, 361, 641, 1060, 1371
HpyCH4IV	ACGT	5 cut(s)	204, 527, 732, 852, 1002
HpyCH4V	TGCA	6 cut(s)	753, 931, 1006, 1367, 1421, 1460
HpyF10VI	GCNNNNNNNGC	7 cut(s)	45, 259, 446, 671, 698, 959, 1062
HpyF3I	CTNAG	7 cut(s)	74, 416, 809, 821, 920, 1137, 1184
HpySE526I	ACGT	5 cut(s)	204, 527, 732, 852, 1002
Hsp92I	GRCGYC	6 cut(s)	107, 486, 539, 747, 785, 1309
Hsp92II	CATG	3 cut(s)	523, 709, 757
HspAI	GCGC	7 cut(s)	196, 226, 231, 251, 539, 714, 1309
KasI	GGCGCC	2 cut(s)	538, 1308
KspI	CCGCGG	1 cut(s)	585
Kzo9I	GATC	6 cut(s)	7, 28, 805, 843, 903, 916
LmnI	GCTCC	7 cut(s)	96, 538, 544, 697, 897, 958, 1088
Lsp1109I	GCAGC	1 cut(s)	915
MaeI	CTAG	3 cut(s)	242, 254, 1313
MaeII	ACGT	5 cut(s)	204, 527, 732, 852, 1002
MaeIII	GTNAC	3 cut(s)	355, 641, 1208
MalI	GATC	6 cut(s)	9, 30, 807, 845, 905, 918
MbiI	CCGCTC	2 cut(s)	91, 455
MboI	GATC	6 cut(s)	7, 28, 805, 843, 903, 916
MboII	GAAGA	3 cut(s)	718, 976, 1235
MhlI	GDGCHC	5 cut(s)	535, 865, 926, 955, 1423
MlsI	TGGCCA	1 cut(s)	282
MluCI	AATT	6 cut(s)	307, 509, 1111, 1194, 1430, 1445
MluNI	TGGCCA	1 cut(s)	282
Mly113I	GGCGCC	2 cut(s)	539, 1309
MlyI	GAGTC	2 cut(s)	464, 494
MmeI	TCCRAC	1 cut(s)	710
Mox20I	TGGCCA	1 cut(s)	282
MscI	TGGCCA	1 cut(s)	282
MseI	TTAA	1 cut(s)	1433
MslI	CAYNNNNRTG	1 cut(s)	758
Msp20I	TGGCCA	1 cut(s)	282
MspA1I	CMGCKG	3 cut(s)	39, 584, 701
MspI	CCGG	7 cut(s)	173, 377, 536, 542, 609, 869, 1143
MspR9I	CCNGG	3 cut(s)	173, 377, 610
MteI	GCGCNGCGC	1 cut(s)	229
Mva1269I	GAATGC	1 cut(s)	1394
MvnI	CGCG	7 cut(s)	196, 226, 231, 251, 584, 674, 716
MwoI	GCNNNNNNNGC	7 cut(s)	45, 259, 446, 671, 698, 959, 1062
NarI	GGCGCC	2 cut(s)	539, 1309
NciI	CCSGG	3 cut(s)	173, 377, 610
NdeII	GATC	6 cut(s)	7, 28, 805, 843, 903, 916
NlaIII	CATG	3 cut(s)	523, 709, 757
NmeAIII	GCCGAG	2 cut(s)	330, 856
NspI	RCATGY	1 cut(s)	757
PaeI	GCATGC	1 cut(s)	757
PaqCI	CACCTGC	1 cut(s)	1327
PcsI	WCGNNNNNNNCGW	6 cut(s)	357, 495, 504, 744, 785, 912
PctI	GAATGC	1 cut(s)	1394
PfeI	GAWTC	3 cut(s)	257, 682, 1331
PleI	GAGTC	2 cut(s)	464, 494
PluTI	GGCGCC	2 cut(s)	542, 1312
PmaCI	CACGTG	2 cut(s)	733, 853
PmlI	CACGTG	2 cut(s)	733, 853
PpsI	GAGTC	2 cut(s)	464, 494
Ppu21I	YACGTR	2 cut(s)	733, 853
PshBI	ATTAAT	1 cut(s)	1433
PsiI	TTATAA	1 cut(s)	1199
Psp124BI	GAGCTC	1 cut(s)	926
PspCI	CACGTG	2 cut(s)	733, 853
PspOMI	GGGCCC	1 cut(s)	861
PspPI	GGNCC	9 cut(s)	556, 586, 603, 612, 825, 861, 862, 1064, 1190
PstI	CTGCAG	1 cut(s)	933
PvuII	CAGCTG	1 cut(s)	701
RsaI	GTAC	4 cut(s)	492, 737, 1287, 1410
RsaNI	GTAC	4 cut(s)	491, 736, 1286, 1409
RseI	CAYNNNNRTG	1 cut(s)	758
SacI	GAGCTC	1 cut(s)	926
SacII	CCGCGG	1 cut(s)	585
SaqAI	TTAA	1 cut(s)	1433
Sau3AI	GATC	6 cut(s)	7, 28, 805, 843, 903, 916
Sau96I	GGNCC	9 cut(s)	556, 586, 603, 612, 825, 861, 862, 1064, 1190
SchI	GAGTC	2 cut(s)	464, 494
ScrFI	CCNGG	3 cut(s)	173, 377, 610
SduI	GDGCHC	5 cut(s)	535, 865, 926, 955, 1423
SfcI	CTRYAG	1 cut(s)	929
SfoI	GGCGCC	2 cut(s)	540, 1310
Sfr303I	CCGCGG	1 cut(s)	585
SgrAI	CRCCGGYG	1 cut(s)	868
SgrBI	CCGCGG	1 cut(s)	585
SinI	GGWCC	4 cut(s)	556, 586, 603, 1190
SmiMI	CAYNNNNRTG	1 cut(s)	758
SmlI	CTYRAG	1 cut(s)	983
SmoI	CTYRAG	1 cut(s)	983
SphI	GCATGC	1 cut(s)	757
Sse9I	AATT	6 cut(s)	307, 509, 1111, 1194, 1430, 1445
SspDI	GGCGCC	2 cut(s)	538, 1308
SspMI	CTAG	3 cut(s)	242, 254, 1313
SstI	GAGCTC	1 cut(s)	926
StyD4I	CCNGG	3 cut(s)	171, 375, 608
StyI	CCWWGG	1 cut(s)	1312
TaaI	ACNGT	5 cut(s)	71, 361, 641, 1060, 1371
TaiI	ACGT	5 cut(s)	207, 530, 735, 855, 1005
TaqI	TCGA	7 cut(s)	183, 315, 498, 788, 906, 975, 1045
TasI	AATT	6 cut(s)	307, 509, 1111, 1194, 1430, 1445
TfiI	GAWTC	3 cut(s)	257, 682, 1331
Tru1I	TTAA	1 cut(s)	1433
Tru9I	TTAA	1 cut(s)	1433
TscAI	CASTG	2 cut(s)	1255, 1333
TseI	GCWGC	1 cut(s)	928
TspDTI	ATGAA	4 cut(s)	1217, 1236, 1387, 1419
TspGWI	ACGGA	2 cut(s)	357, 643
TspRI	CASTG	2 cut(s)	1255, 1333
VneI	GTGCAC	1 cut(s)	1419
VpaK11BI	GGWCC	4 cut(s)	556, 586, 603, 1190
VspI	ATTAAT	1 cut(s)	1433
XapI	RAATTY	2 cut(s)	509, 1111
XceI	RCATGY	1 cut(s)	757
XmaJI	CCTAGG	1 cut(s)	1312
XspI	CTAG	3 cut(s)	242, 254, 1313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.