Rmu_sc0013571.1_g000005

AMP-binding enzyme

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013571.1
Physical Location & Seq
Forward (+)
32416 .. 33447
1032 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013571.1_g000005.1.cds

Sequence Viewer

Length: 1032 bp
atggccgatcacaacactaccagcattgatcccaacagcggcttctgctcaaacaccaaaacattccacagtctcaggccgaaagccccgctcccctccgaaacgacgccgctttcgatcactcactacattttctcccacctccaagcctcccctcctccgccctccaccccggctctcctcgaccccgccacgcgccgccacattctctaccccgagttcacgcgccgcgtcaaaaccctagcagccgcgctagaatctcaactcaatctctccaatggccacaccgccttcgtcatctcccccaattctctggacctccccatcctctacttctctctcttttccctcggcgtaaccgtctctccgtcaaacccggccagcaccactcccgagatttcccgccaaatccacctcagcagacccgtcatcgccttcgccacctccgccaccgctcacaaactccccaactccctccaatacggcgttgtactcctcgactccccggaattccagtccatgatgacgtgtgctccggcgcctgagcttccacgtgtccgcttcagccaatcccacaccgccgcggtcctcttctcgtcggggaccaccggggccgtcaaaggcgtggagttgacccaccgtaactggatttccgtgctggcgtcggcgttcgcggttcggaatccgacggctccgccagctgtcatgctctgcgcggtgccgttcttccacgtgtacggcttcggcgtctgcatgcgggtgttggggttcggcgagacgctggcgtcgatttcggggaggtttgatctgagagcgacgctgagggccgtcgaggagttcaggatcagccacgtatcttgggccccgccggtggtggtggcggtggtgaagctcgggagcgagatcgacggctacgatctgagctcgctgcaggtcgtcgcctgcggcggtgctccgcttgcgaagagtgtcatcgataagctgaagaaacgccttcctaacgtgcaagtcgcacaggtcagtagtgcatga

Protein Analysis

343

Amino Acids

36.79

Weight (kDa)

9.3

Isoelectric Point (pI)

57.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 784
Acc36I ACCTGC 1 cut(s) 922
AccB1I GGYRCC 2 cut(s) 538, 718
AccBSI CCGCTC 2 cut(s) 91, 455
AccII CGCG 7 cut(s) 196, 226, 231, 251, 584, 674, 716
AclWI GGATC 2 cut(s) 23, 851
AcoI YGGCCR 3 cut(s) 3, 280, 378
AcsI RAATTY 1 cut(s) 509
AcuI CTGAAG 2 cut(s) 547, 1004
AcvI CACGTG 2 cut(s) 554, 733
AcyI GRCGYC 5 cut(s) 107, 539, 662, 747, 785
AfaI GTAC 2 cut(s) 492, 737
AfiI CCNNNNNNNGG 2 cut(s) 38, 871
AflIII ACRYGT 3 cut(s) 527, 553, 732
AjiI CACGTC 1 cut(s) 528
AjuI GAANNNNNNNTTGG 2 cut(s) 26, 58
AluBI AGCT 5 cut(s) 547, 701, 892, 924, 982
AluI AGCT 5 cut(s) 547, 701, 892, 924, 982
Alw21I GWGCWC 3 cut(s) 535, 926, 955
Alw26I GTCTC 3 cut(s) 77, 367, 770
AlwI GGATC 2 cut(s) 23, 851
Ama87I CYCGRG 3 cut(s) 215, 392, 893
AoxI GGCC 7 cut(s) 3, 77, 280, 378, 612, 825, 861
ApaI GGGCCC 1 cut(s) 865
ApeKI GCWGC 2 cut(s) 245, 928
ApoI RAATTY 1 cut(s) 509
ArsI GACNNNNNNTTYG 2 cut(s) 97, 129
AspLEI GCGC 5 cut(s) 198, 228, 253, 541, 716
AspS9I GGNCC 7 cut(s) 316, 586, 603, 612, 825, 861, 862
AsuC2I CCSGG 4 cut(s) 173, 377, 506, 610
AsuHPI GGTGA 1 cut(s) 898
AvaI CYCGRG 3 cut(s) 215, 392, 893
AvaII GGWCC 3 cut(s) 316, 586, 603
BaeGI GKGCMC 1 cut(s) 865
BalI TGGCCA 1 cut(s) 282
BanI GGYRCC 2 cut(s) 538, 718
BanII GRGCYC 2 cut(s) 865, 926
BbrPI CACGTG 2 cut(s) 554, 733
Bbv12I GWGCWC 3 cut(s) 535, 926, 955
BbvCI CCTCAGC 2 cut(s) 416, 821
BbvI GCAGC 2 cut(s) 257, 915
BccI CCATC 1 cut(s) 332
BceAI ACGGC 7 cut(s) 499, 599, 705, 706, 754, 812, 925
BcnI CCSGG 4 cut(s) 173, 377, 506, 610
BcoDI GTCTC 3 cut(s) 77, 367, 770
BfaI CTAG 2 cut(s) 242, 254
BfmI CTRYAG 1 cut(s) 929
BfoI RGCGCY 1 cut(s) 542
BfuAI ACCTGC 1 cut(s) 922
BisI GCNGC 9 cut(s) 40, 110, 199, 229, 246, 249, 582, 929, 946
BlsI GCNGC 9 cut(s) 41, 111, 200, 230, 247, 250, 583, 930, 947
Bme1390I CCNGG 4 cut(s) 173, 377, 506, 610
Bme18I GGWCC 3 cut(s) 316, 586, 603
BmeT110I CYCGRG 3 cut(s) 215, 392, 893
BmgBI CACGTC 1 cut(s) 528
BmgT120I GGNCC 7 cut(s) 316, 586, 603, 612, 825, 861, 862
BmiI GGNNCC 7 cut(s) 540, 604, 613, 693, 720, 863, 864
BmrFI CCNGG 4 cut(s) 173, 377, 506, 610
Bpu10I CCTNAGC 3 cut(s) 416, 543, 821
BpuMI CCSGG 4 cut(s) 173, 377, 506, 610
Bsa29I ATCGAT 1 cut(s) 975
BsaAI YACGTR 3 cut(s) 554, 733, 853
BsaHI GRCGYC 5 cut(s) 107, 539, 662, 747, 785
BsaJI CCNNGG 5 cut(s) 171, 349, 504, 582, 609
BsaXI ACNNNNNCTCC 6 cut(s) 119, 149, 349, 379, 517, 547
Bsc4I CCNNNNNNNGG 2 cut(s) 38, 871
Bse118I RCCGGY 1 cut(s) 868
Bse1I ACTGG 2 cut(s) 514, 650
BseCI ATCGAT 1 cut(s) 975
BseDI CCNNGG 5 cut(s) 171, 349, 504, 582, 609
BseGI GGATG 1 cut(s) 324
BseLI CCNNNNNNNGG 2 cut(s) 38, 871
BseMII CTCAG 6 cut(s) 88, 430, 534, 800, 812, 911
BseNI ACTGG 2 cut(s) 514, 650
BseRI GAGGAG 4 cut(s) 147, 170, 485, 848
BseSI GKGCMC 1 cut(s) 865
BseXI GCAGC 2 cut(s) 257, 915
Bsh1236I CGCG 7 cut(s) 196, 226, 231, 251, 584, 674, 716
BshFI GGCC 7 cut(s) 5, 79, 282, 380, 614, 827, 863
BshNI GGYRCC 2 cut(s) 538, 718
BshVI ATCGAT 1 cut(s) 975
BsiHKAI GWGCWC 3 cut(s) 535, 926, 955
BsiHKCI CYCGRG 3 cut(s) 215, 392, 893
BsiSI CCGG 6 cut(s) 173, 377, 506, 536, 609, 869
BslFI GGGAC 1 cut(s) 616
BslI CCNNNNNNNGG 2 cut(s) 38, 871
BsmAI GTCTC 3 cut(s) 77, 367, 770
BsmBI CGTCTC 2 cut(s) 367, 770
BsmFI GGGAC 1 cut(s) 616
BsnI GGCC 7 cut(s) 5, 79, 282, 380, 614, 827, 863
BsoBI CYCGRG 3 cut(s) 215, 392, 893
Bsp120I GGGCCC 1 cut(s) 861
Bsp1286I GDGCHC 4 cut(s) 535, 865, 926, 955
Bsp143I GATC 7 cut(s) 7, 28, 117, 805, 843, 903, 916
BspANI GGCC 7 cut(s) 5, 79, 282, 380, 614, 827, 863
BspCNI CTCAG 6 cut(s) 87, 429, 535, 801, 813, 912
BspDI ATCGAT 1 cut(s) 975
BspFNI CGCG 7 cut(s) 196, 226, 231, 251, 584, 674, 716
BspLI GGNNCC 7 cut(s) 540, 604, 613, 693, 720, 863, 864
BspMAI CTGCAG 1 cut(s) 933
BspMI ACCTGC 1 cut(s) 922
BspPI GGATC 2 cut(s) 23, 851
BspT107I GGYRCC 2 cut(s) 538, 718
BsrBI CCGCTC 2 cut(s) 91, 455
BsrFI RCCGGY 1 cut(s) 868
BsrI ACTGG 2 cut(s) 514, 650
BssAI RCCGGY 1 cut(s) 868
BssECI CCNNGG 5 cut(s) 171, 349, 504, 582, 609
BssMI GATC 7 cut(s) 7, 28, 117, 805, 843, 903, 916
BssNI GRCGYC 5 cut(s) 107, 539, 662, 747, 785
Bst4CI ACNGT 3 cut(s) 71, 361, 641
Bst6I CTCTTC 2 cut(s) 596, 959
BstACI GRCGYC 5 cut(s) 107, 539, 662, 747, 785
BstBAI YACGTR 3 cut(s) 554, 733, 853
BstC8I GCNNGC 8 cut(s) 382, 660, 699, 755, 783, 926, 943, 960
BstDEI CTNAG 6 cut(s) 74, 416, 543, 809, 821, 920
BstDSI CCRYGG 1 cut(s) 582
BstF5I GGATG 1 cut(s) 324
BstFNI CGCG 7 cut(s) 196, 226, 231, 251, 584, 674, 716
BstH2I RGCGCY 1 cut(s) 542
BstHHI GCGC 5 cut(s) 198, 228, 253, 541, 716
BstKTI GATC 7 cut(s) 10, 31, 120, 808, 846, 906, 919
BstMAI GTCTC 3 cut(s) 77, 367, 770
BstMBI GATC 7 cut(s) 7, 28, 117, 805, 843, 903, 916
BstMWI GCNNNNNNNGC 4 cut(s) 45, 446, 698, 959
BstNSI RCATGY 1 cut(s) 757
BstSCI CCNGG 4 cut(s) 171, 375, 504, 608
BstSFI CTRYAG 1 cut(s) 929
BstSLI GKGCMC 1 cut(s) 865
BstUI CGCG 7 cut(s) 196, 226, 231, 251, 584, 674, 716
BstV1I GCAGC 2 cut(s) 257, 915
BstXI CCANNNNNNTGG 1 cut(s) 313
Bsu15I ATCGAT 1 cut(s) 975
BsuRI GGCC 7 cut(s) 5, 79, 282, 380, 614, 827, 863
BsuTUI ATCGAT 1 cut(s) 975
BtgI CCRYGG 1 cut(s) 582
BtgZI GCGATG 1 cut(s) 415
BtrI CACGTC 1 cut(s) 528
BtsCI GGATG 1 cut(s) 324
BveI ACCTGC 1 cut(s) 922
Cac8I GCNNGC 8 cut(s) 382, 660, 699, 755, 783, 926, 943, 960
CfoI GCGC 5 cut(s) 198, 228, 253, 541, 716
Cfr10I RCCGGY 1 cut(s) 868
Cfr13I GGNCC 7 cut(s) 316, 586, 603, 612, 825, 861, 862
Cfr42I CCGCGG 1 cut(s) 585
ClaI ATCGAT 1 cut(s) 975
CseI GACGC 7 cut(s) 115, 220, 651, 736, 774, 787, 826
Csp6I GTAC 2 cut(s) 491, 736
CspCI CAANNNNNGTGG 2 cut(s) 839, 874
CviAII CATG 4 cut(s) 520, 706, 754, 1029
CviQI GTAC 2 cut(s) 491, 736
DdeI CTNAG 6 cut(s) 74, 416, 543, 809, 821, 920
DinI GGCGCC 1 cut(s) 540
DpnI GATC 7 cut(s) 9, 30, 119, 807, 845, 905, 918
DpnII GATC 7 cut(s) 7, 28, 117, 805, 843, 903, 916
DrdI GACNNNNNNGTC 1 cut(s) 784
DseDI GACNNNNNNGTC 1 cut(s) 784
EaeI YGGCCR 3 cut(s) 3, 280, 378
Eam1104I CTCTTC 2 cut(s) 596, 959
EarI CTCTTC 2 cut(s) 596, 959
EciI GGCGGA 3 cut(s) 150, 436, 684
Ecl136II GAGCTC 1 cut(s) 924
Eco24I GRGCYC 2 cut(s) 865, 926
Eco47I GGWCC 3 cut(s) 316, 586, 603
Eco53kI GAGCTC 1 cut(s) 924
Eco57I CTGAAG 2 cut(s) 547, 1004
Eco72I CACGTG 2 cut(s) 554, 733
Eco88I CYCGRG 3 cut(s) 215, 392, 893
EcoICRI GAGCTC 1 cut(s) 924
EcoO109I RGGNCCY 1 cut(s) 862
EcoRI GAATTC 1 cut(s) 509
EcoT38I GRGCYC 2 cut(s) 865, 926
EgeI GGCGCC 1 cut(s) 540
EheI GGCGCC 1 cut(s) 540
Esp3I CGTCTC 2 cut(s) 367, 770
FaeI CATG 4 cut(s) 523, 709, 757, 1032
FaiI YATR 4 cut(s) 521, 707, 755, 1030
FaqI GGGAC 1 cut(s) 616
FatI CATG 4 cut(s) 519, 705, 753, 1028
FauI CCCGC 5 cut(s) 96, 196, 410, 750, 873
Fnu4HI GCNGC 9 cut(s) 40, 110, 199, 229, 246, 249, 582, 929, 946
FokI GGATG 1 cut(s) 311
FriOI GRGCYC 2 cut(s) 865, 926
Fsp4HI GCNGC 9 cut(s) 40, 110, 199, 229, 246, 249, 582, 929, 946
FspBI CTAG 2 cut(s) 242, 254
GlaI GCGC 5 cut(s) 197, 227, 252, 540, 715
GluI GCNGC 9 cut(s) 40, 110, 199, 229, 246, 249, 582, 929, 946
HaeII RGCGCY 1 cut(s) 542
HaeIII GGCC 7 cut(s) 5, 79, 282, 380, 614, 827, 863
HapII CCGG 6 cut(s) 173, 377, 506, 536, 609, 869
HgaI GACGC 7 cut(s) 115, 220, 651, 736, 774, 787, 826
HhaI GCGC 5 cut(s) 198, 228, 253, 541, 716
Hin1I GRCGYC 5 cut(s) 107, 539, 662, 747, 785
Hin1II CATG 4 cut(s) 523, 709, 757, 1032
Hin6I GCGC 5 cut(s) 196, 226, 251, 539, 714
HinP1I GCGC 5 cut(s) 196, 226, 251, 539, 714
HincII GTYRAC 1 cut(s) 633
HindII GTYRAC 1 cut(s) 633
HinfI GANTC 3 cut(s) 257, 500, 682
HpaII CCGG 6 cut(s) 173, 377, 506, 536, 609, 869
HphI GGTGA 1 cut(s) 898
Hpy166II GTNNAC 3 cut(s) 222, 633, 736
Hpy188I TCNGA 5 cut(s) 100, 681, 687, 810, 921
Hpy188III TCNNGA 4 cut(s) 314, 392, 841, 895
Hpy8I GTNNAC 3 cut(s) 222, 633, 736
Hpy99I CGWCG 9 cut(s) 109, 601, 667, 691, 790, 820, 833, 911, 941
HpyAV CCTTC 3 cut(s) 301, 445, 1004
HpyCH4III ACNGT 3 cut(s) 71, 361, 641
HpyCH4IV ACGT 5 cut(s) 527, 553, 732, 852, 1002
HpyCH4V TGCA 4 cut(s) 753, 931, 1006, 1028
HpyF10VI GCNNNNNNNGC 4 cut(s) 45, 446, 698, 959
HpyF3I CTNAG 6 cut(s) 74, 416, 543, 809, 821, 920
HpySE526I ACGT 5 cut(s) 527, 553, 732, 852, 1002
Hsp92I GRCGYC 5 cut(s) 107, 539, 662, 747, 785
Hsp92II CATG 4 cut(s) 523, 709, 757, 1032
HspAI GCGC 5 cut(s) 196, 226, 251, 539, 714
KasI GGCGCC 1 cut(s) 538
KspI CCGCGG 1 cut(s) 585
Kzo9I GATC 7 cut(s) 7, 28, 117, 805, 843, 903, 916
LmnI GCTCC 5 cut(s) 96, 538, 697, 897, 958
Lsp1109I GCAGC 2 cut(s) 257, 915
MaeI CTAG 2 cut(s) 242, 254
MaeII ACGT 5 cut(s) 527, 553, 732, 852, 1002
MaeIII GTNAC 2 cut(s) 355, 641
MalI GATC 7 cut(s) 9, 30, 119, 807, 845, 905, 918
MbiI CCGCTC 2 cut(s) 91, 455
MboI GATC 7 cut(s) 7, 28, 117, 805, 843, 903, 916
MboII GAAGA 4 cut(s) 583, 718, 976, 997
MhlI GDGCHC 4 cut(s) 535, 865, 926, 955
MlsI TGGCCA 1 cut(s) 282
MluCI AATT 2 cut(s) 307, 509
MluNI TGGCCA 1 cut(s) 282
Mly113I GGCGCC 1 cut(s) 539
MlyI GAGTC 1 cut(s) 494
MmeI TCCRAC 1 cut(s) 710
Mox20I TGGCCA 1 cut(s) 282
MscI TGGCCA 1 cut(s) 282
MslI CAYNNNNRTG 1 cut(s) 758
Msp20I TGGCCA 1 cut(s) 282
MspA1I CMGCKG 3 cut(s) 39, 584, 701
MspI CCGG 6 cut(s) 173, 377, 506, 536, 609, 869
MspR9I CCNGG 4 cut(s) 173, 377, 506, 610
MvnI CGCG 7 cut(s) 196, 226, 231, 251, 584, 674, 716
MwoI GCNNNNNNNGC 4 cut(s) 45, 446, 698, 959
NarI GGCGCC 1 cut(s) 539
NciI CCSGG 4 cut(s) 173, 377, 506, 610
NdeII GATC 7 cut(s) 7, 28, 117, 805, 843, 903, 916
NlaIII CATG 4 cut(s) 523, 709, 757, 1032
NlaIV GGNNCC 7 cut(s) 540, 604, 613, 693, 720, 863, 864
NmeAIII GCCGAG 1 cut(s) 330
NspI RCATGY 1 cut(s) 757
PaeI GCATGC 1 cut(s) 757
PcsI WCGNNNNNNNCGW 5 cut(s) 113, 357, 744, 785, 912
PfeI GAWTC 2 cut(s) 257, 682
PkrI GCNGC 9 cut(s) 41, 111, 200, 230, 247, 250, 583, 930, 947
PleI GAGTC 1 cut(s) 494
PluTI GGCGCC 1 cut(s) 542
PmaCI CACGTG 2 cut(s) 554, 733
PmlI CACGTG 2 cut(s) 554, 733
PpsI GAGTC 1 cut(s) 494
Ppu21I YACGTR 3 cut(s) 554, 733, 853
Psp124BI GAGCTC 1 cut(s) 926
PspCI CACGTG 2 cut(s) 554, 733
PspN4I GGNNCC 7 cut(s) 540, 604, 613, 693, 720, 863, 864
PspOMI GGGCCC 1 cut(s) 861
PspPI GGNCC 7 cut(s) 316, 586, 603, 612, 825, 861, 862
PstI CTGCAG 1 cut(s) 933
PvuII CAGCTG 1 cut(s) 701
RsaI GTAC 2 cut(s) 492, 737
RsaNI GTAC 2 cut(s) 491, 736
RseI CAYNNNNRTG 1 cut(s) 758
SacI GAGCTC 1 cut(s) 926
SacII CCGCGG 1 cut(s) 585
SatI GCNGC 9 cut(s) 40, 110, 199, 229, 246, 249, 582, 929, 946
Sau3AI GATC 7 cut(s) 7, 28, 117, 805, 843, 903, 916
Sau96I GGNCC 7 cut(s) 316, 586, 603, 612, 825, 861, 862
SchI GAGTC 1 cut(s) 494
ScrFI CCNGG 4 cut(s) 173, 377, 506, 610
SduI GDGCHC 4 cut(s) 535, 865, 926, 955
SfcI CTRYAG 1 cut(s) 929
SfoI GGCGCC 1 cut(s) 540
Sfr303I CCGCGG 1 cut(s) 585
SgrAI CRCCGGYG 1 cut(s) 868
SgrBI CCGCGG 1 cut(s) 585
SinI GGWCC 3 cut(s) 316, 586, 603
SmiMI CAYNNNNRTG 1 cut(s) 758
SphI GCATGC 1 cut(s) 757
Sse9I AATT 2 cut(s) 307, 509
SspDI GGCGCC 1 cut(s) 538
SspMI CTAG 2 cut(s) 242, 254
SstI GAGCTC 1 cut(s) 926
StyD4I CCNGG 4 cut(s) 171, 375, 504, 608
TaaI ACNGT 3 cut(s) 71, 361, 641
TaiI ACGT 5 cut(s) 530, 556, 735, 855, 1005
TaqI TCGA 7 cut(s) 116, 183, 498, 788, 831, 906, 975
TasI AATT 2 cut(s) 307, 509
TatI WGTACW 1 cut(s) 490
TauI GCSGC 7 cut(s) 42, 112, 201, 231, 251, 584, 948
TfiI GAWTC 2 cut(s) 257, 682
TseI GCWGC 2 cut(s) 245, 928
TspGWI ACGGA 2 cut(s) 357, 643
VpaK11BI GGWCC 3 cut(s) 316, 586, 603
XapI RAATTY 1 cut(s) 509
XceI RCATGY 1 cut(s) 757
XspI CTAG 2 cut(s) 242, 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.