Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002452

Physical Location & Seq

Genomic Coordinates Reverse (-)

10560101 .. 10561137

Gene Structure 1037 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G133600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 468 bp

ATGGCCTCCAAAACAATTCTCCTTGTGTGCCTCTTGGTTGCCACAGTGGCAATAGTAGTTCCAATAGCTGAAGCTCAACTTGGGCTCATCAGCGGCCTCCTTGGTCTGATCCGCATACAAGGAACTCTGTTTTGCTCTCCCTCCGGAAATGTGGGCACTGGTGGTGCTACCGCTACCCCGGTATTTGCAAATGCTACTCTACAACTGCTGTGTGGAACTGTGGGTAATGTGATTTCAACTGCAACAACCAATAGCCAAGGAATCTTTTCAATCTTGTTGGATCCTCTACAATTTCTCCTCTCTTCACTATTGGCGGATTGCAAGCTGATGGTGAGGACACCGCTCTCTGCCTGCAACTCTTCATTGACCGGGCTTCTGGCATCCCCCTTGCAGTTTATCGGAAACACCATTTCCGGTCTCCTCAACATCGTCAACATCATCCCAGGCGGCTTCAACCTCATCAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pollen_Ole_e_I

Protein Analysis

156

Amino Acids

15.74

Weight (kDa)

7.6

Isoelectric Point (pI)

32.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002452)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16660 AT3G16660 AT3G16670
fragaria_vesca	FvH4_4g18430 FvH4_4g18430 FvH4_4g18430 FvH4_4g18480
malus_domestica	MD00G1127800.v1.1
prunus_persica	Prupe.1G133600_v2.0.a1 Prupe.1G133700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0422901 RchiOBHm_Chr4g0422991
rosa_laevigata	RLG00000007593 RLG00000007596
rosa_multiflora	Rmu_sc0000744.1_g000139 Rmu_sc0000744.1_g000163 Rmu_sc0000830.1_g000011 Rmu_sc0002835.1_g000014
rosa_roxburghii	Rroxscaffold_5G00364790 Rroxscaffold_5G00364800 Rroxscaffold_5G00364960 Rroxscaffold_5G00365000 Rroxscaffold_5G00365020 Rroxscaffold_5G00365030 Rroxscaffold_5G00365090
rosa_rugosa	Rorug04G0182100 Rorug04G0182500 Rorug04G0183000
rosa_samantha	Rh4BG246400 Rh4BG246500 Rh4BG246600 Rh4BG246700 Rh4BG246800 Rh4BG246900 Rh4BG247500 Rh4CG256600 Rh4CG256900
rosa_wichuraiana	Rw0G015770 Rw0G018530 Rw0G022110 Rw4G020930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	343
AccIII	TCCGGA	1 cut(s)	143
AciI	CCGC	6 cut(s)	93, 112, 171, 314, 341, 447
AclWI	GGATC	3 cut(s)	103, 275, 288
AcuI	CTGAAG	1 cut(s)	90
AgsI	TTSAA	3 cut(s)	237, 270, 454
AjnI	CCWGG	1 cut(s)	442
AjuI	GAANNNNNNNTTGG	2 cut(s)	63, 95
AluBI	AGCT	3 cut(s)	68, 74, 325
AluI	AGCT	3 cut(s)	68, 74, 325
Alw26I	GTCTC	1 cut(s)	422
AlwI	GGATC	3 cut(s)	103, 275, 288
Aor13HI	TCCGGA	1 cut(s)	143
AoxI	GGCC	2 cut(s)	3, 94
Asp700I	GAANNNNTTC	1 cut(s)	265
AsuC2I	CCSGG	2 cut(s)	179, 370
AsuHPI	GGTGA	1 cut(s)	343
BaeGI	GKGCMC	1 cut(s)	158
BamHI	GGATCC	1 cut(s)	280
BanII	GRGCYC	1 cut(s)	87
BccI	CCATC	1 cut(s)	322
BciT130I	CCWGG	1 cut(s)	444
BcnI	CCSGG	2 cut(s)	179, 370
BcoDI	GTCTC	1 cut(s)	422
BglI	GCCNNNNNGGC	1 cut(s)	47
BisI	GCNGC	2 cut(s)	94, 448
BlsI	GCNGC	2 cut(s)	95, 449
Bme1390I	CCNGG	3 cut(s)	179, 370, 444
BmiI	GGNNCC	1 cut(s)	282
BmrFI	CCNGG	3 cut(s)	179, 370, 444
BmsI	GCATC	1 cut(s)	389
BpuMI	CCSGG	2 cut(s)	179, 370
BsaI	GGTCTC	1 cut(s)	422
BsaJI	CCNNGG	4 cut(s)	100, 177, 256, 442
BsaWI	WCCGGW	2 cut(s)	143, 413
BsaXI	ACNNNNNCTCC	2 cut(s)	279, 309
Bse1I	ACTGG	1 cut(s)	163
BseAI	TCCGGA	1 cut(s)	143
BseBI	CCWGG	1 cut(s)	444
BseDI	CCNNGG	4 cut(s)	100, 177, 256, 442
BseGI	GGATG	2 cut(s)	380, 438
BseNI	ACTGG	1 cut(s)	163
BseRI	GAGGAG	2 cut(s)	287, 410
BseSI	GKGCMC	1 cut(s)	158
BshFI	GGCC	2 cut(s)	5, 96
BsiSI	CCGG	4 cut(s)	144, 179, 369, 414
BsmAI	GTCTC	1 cut(s)	422
BsnI	GGCC	2 cut(s)	5, 96
Bso31I	GGTCTC	1 cut(s)	422
Bsp1286I	GDGCHC	2 cut(s)	87, 158
Bsp13I	TCCGGA	1 cut(s)	143
Bsp143I	GATC	2 cut(s)	108, 280
BspACI	CCGC	6 cut(s)	93, 112, 171, 314, 341, 447
BspANI	GGCC	2 cut(s)	5, 96
BspEI	TCCGGA	1 cut(s)	143
BspLI	GGNNCC	1 cut(s)	282
BspPI	GGATC	3 cut(s)	103, 275, 288
BspTNI	GGTCTC	1 cut(s)	422
BsrBI	CCGCTC	1 cut(s)	343
BsrI	ACTGG	1 cut(s)	163
BssECI	CCNNGG	4 cut(s)	100, 177, 256, 442
BssMI	GATC	2 cut(s)	108, 280
BssT1I	CCWWGG	2 cut(s)	100, 256
Bst2UI	CCWGG	1 cut(s)	444
Bst4CI	ACNGT	2 cut(s)	46, 220
Bst6I	CTCTTC	2 cut(s)	307, 364
BstC8I	GCNNGC	2 cut(s)	323, 352
BstF5I	GGATG	2 cut(s)	380, 438
BstKTI	GATC	2 cut(s)	111, 283
BstMAI	GTCTC	1 cut(s)	422
BstMBI	GATC	2 cut(s)	108, 280
BstMWI	GCNNNNNNNGC	1 cut(s)	47
BstNI	CCWGG	1 cut(s)	444
BstSCI	CCNGG	3 cut(s)	177, 368, 442
BstSLI	GKGCMC	1 cut(s)	158
BstX2I	RGATCY	1 cut(s)	280
BstYI	RGATCY	1 cut(s)	280
BsuRI	GGCC	2 cut(s)	5, 96
BtsCI	GGATG	2 cut(s)	380, 438
BtsIMutI	CAGTG	2 cut(s)	51, 156
Cac8I	GCNNGC	2 cut(s)	323, 352
CviJI	RGCY	9 cut(s)	5, 68, 74, 85, 96, 255, 325, 373, 450
CviKI_1	RGCY	9 cut(s)	5, 68, 74, 85, 96, 255, 325, 373, 450
DpnI	GATC	2 cut(s)	110, 282
DpnII	GATC	2 cut(s)	108, 280
Eam1104I	CTCTTC	2 cut(s)	307, 364
EarI	CTCTTC	2 cut(s)	307, 364
EciI	GGCGGA	1 cut(s)	329
Eco130I	CCWWGG	2 cut(s)	100, 256
Eco24I	GRGCYC	1 cut(s)	87
Eco31I	GGTCTC	1 cut(s)	422
Eco57I	CTGAAG	1 cut(s)	90
EcoRII	CCWGG	1 cut(s)	442
EcoT14I	CCWWGG	2 cut(s)	100, 256
EcoT38I	GRGCYC	1 cut(s)	87
ErhI	CCWWGG	2 cut(s)	100, 256
FaiI	YATR	1 cut(s)	116
FalI	AAGNNNNNCTT	2 cut(s)	63, 95
Fnu4HI	GCNGC	2 cut(s)	94, 448
FokI	GGATG	2 cut(s)	367, 425
FriOI	GRGCYC	1 cut(s)	87
Fsp4HI	GCNGC	2 cut(s)	94, 448
GluI	GCNGC	2 cut(s)	94, 448
HaeIII	GGCC	2 cut(s)	5, 96
HapII	CCGG	4 cut(s)	144, 179, 369, 414
HincII	GTYRAC	1 cut(s)	433
HindII	GTYRAC	1 cut(s)	433
HinfI	GANTC	1 cut(s)	261
HpaII	CCGG	4 cut(s)	144, 179, 369, 414
HphI	GGTGA	1 cut(s)	343
Hpy166II	GTNNAC	1 cut(s)	433
Hpy188I	TCNGA	2 cut(s)	108, 401
Hpy188III	TCNNGA	1 cut(s)	144
Hpy8I	GTNNAC	1 cut(s)	433
HpyCH4III	ACNGT	2 cut(s)	46, 220
HpyCH4V	TGCA	5 cut(s)	188, 242, 321, 354, 391
HpyF10VI	GCNNNNNNNGC	1 cut(s)	47
Kpn2I	TCCGGA	1 cut(s)	143
Kzo9I	GATC	2 cut(s)	108, 280
LpnPI	CCDG	9 cut(s)	144, 157, 192, 362, 364, 382, 427, 429, 456
LweI	GCATC	1 cut(s)	389
MalI	GATC	2 cut(s)	110, 282
MbiI	CCGCTC	1 cut(s)	343
MboI	GATC	2 cut(s)	108, 280
MboII	GAAGA	2 cut(s)	294, 351
MflI	RGATCY	1 cut(s)	280
MhlI	GDGCHC	2 cut(s)	87, 158
MluCI	AATT	3 cut(s)	15, 290, 463
MmeI	TCCRAC	1 cut(s)	258
MnlI	CCTC	9 cut(s)	16, 41, 107, 151, 294, 308, 327, 431, 467
MroI	TCCGGA	1 cut(s)	143
MroXI	GAANNNNTTC	1 cut(s)	265
MseI	TTAA	1 cut(s)	466
MspA1I	CMGCKG	1 cut(s)	93
MspI	CCGG	4 cut(s)	144, 179, 369, 414
MspR9I	CCNGG	3 cut(s)	179, 370, 444
MvaI	CCWGG	1 cut(s)	444
MwoI	GCNNNNNNNGC	1 cut(s)	47
NciI	CCSGG	2 cut(s)	179, 370
NdeII	GATC	2 cut(s)	108, 280
NlaIV	GGNNCC	1 cut(s)	282
PdmI	GAANNNNTTC	1 cut(s)	265
PfeI	GAWTC	1 cut(s)	261
PkrI	GCNGC	2 cut(s)	95, 449
Psp6I	CCWGG	1 cut(s)	442
PspGI	CCWGG	1 cut(s)	442
PspN4I	GGNNCC	1 cut(s)	282
PsuI	RGATCY	1 cut(s)	280
SaqAI	TTAA	1 cut(s)	466
SatI	GCNGC	2 cut(s)	94, 448
Sau3AI	GATC	2 cut(s)	108, 280
ScrFI	CCNGG	3 cut(s)	179, 370, 444
SduI	GDGCHC	2 cut(s)	87, 158
SetI	ASST	4 cut(s)	70, 76, 327, 459
SfaNI	GCATC	1 cut(s)	389
Sse9I	AATT	3 cut(s)	15, 290, 463
SsiI	CCGC	6 cut(s)	93, 112, 171, 314, 341, 447
StyD4I	CCNGG	3 cut(s)	177, 368, 442
StyI	CCWWGG	2 cut(s)	100, 256
TaaI	ACNGT	2 cut(s)	46, 220
TasI	AATT	3 cut(s)	15, 290, 463
TauI	GCSGC	2 cut(s)	96, 450
TfiI	GAWTC	1 cut(s)	261
Tru1I	TTAA	1 cut(s)	466
Tru9I	TTAA	1 cut(s)	466
TscAI	CASTG	2 cut(s)	51, 163
TspDTI	ATGAA	1 cut(s)	351
TspRI	CASTG	2 cut(s)	51, 163
XmnI	GAANNNNTTC	1 cut(s)	265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.