Prupe.1G444100_v2.0.a1

Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000848
Physical Location & Seq
Forward (+)
37640074 .. 37641730
1657 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G444100.2

Sequence Viewer

Length: 396 bp
ATGTCGTGGCAGCAGTACGTCGATGACCACTTGATGTGCGATATTGACGGCAACCGCCTCACCGCCGCGGCAATCCTCGGCCAAGACGGCAGCGTTTGGTCTCAGAGCGCCACCTTTCCTGCGTTTAAGCCTGAAGAGATAGCTGCCATTCTGAAAGATTTCGACCAACCCGGAACGCTTGCCCCAACTGGTTTATTCCTTGGTGGGACAAAGTATATGGTGATCCAAGGTGAAGCCGGTGCTGTCATTCGAGGAAAGAAGGGCTCTGGTGGCATTACTGTTAAGAAGACCAATCAGGCCCTCATCATTGGTATATATGATGAGCCTTTGACTCCAGGGCAGTGCAACATGATTGTCGAAAGGCTTGGCGATTACCTTATCGAGCAGGGTCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0003006 GO:0003674 GO:0003779 GO:0003785 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0005938 GO:0006996 GO:0007010 GO:0007015 GO:0007275 GO:0008064 GO:0008092 GO:0008104 GO:0008150 GO:0008154 GO:0009506 GO:0009507 GO:0009524 GO:0009536 GO:0009653 GO:0009791 GO:0009826 GO:0009987 GO:0010229 GO:0010639 GO:0015629 GO:0015630 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0022622 GO:0030029 GO:0030036 GO:0030054 GO:0030312 GO:0030832 GO:0030833 GO:0030837 GO:0031333 GO:0031974 GO:0031981 GO:0032271 GO:0032272 GO:0032501 GO:0032502 GO:0032507 GO:0032535 GO:0032956 GO:0032970 GO:0032989 GO:0033036 GO:0033043 GO:0034613 GO:0040007 GO:0042989 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0044087 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045185 GO:0048046 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051179 GO:0051235 GO:0051493 GO:0051494 GO:0051641 GO:0051651 GO:0055044 GO:0060560 GO:0061458 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0071840 GO:0071944 GO:0090066 GO:0090567 GO:0090696 GO:0097435 GO:0099402 GO:0099568 GO:0110053 GO:1902903 GO:1902904
KEGG Pathways
Metabolic & Signaling
ko04013 ko04015 ko04810 ko05131 ko05132 map04013 map04015 map04810 map05131 map05132
Pfam Domains
Protein Families
Profilin

Protein Analysis

132

Amino Acids

14.06

Weight (kDa)

4.67

Isoelectric Point (pI)

36.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 68
AciI CCGC 4 cut(s) 55, 63, 66, 68
AclWI GGATC 1 cut(s) 217
AcoI YGGCCR 1 cut(s) 79
AcuI CTGAAG 1 cut(s) 153
AfaI GTAC 1 cut(s) 17
AjnI CCWGG 1 cut(s) 334
AluBI AGCT 1 cut(s) 143
AluI AGCT 1 cut(s) 143
Alw26I GTCTC 1 cut(s) 105
AlwI GGATC 1 cut(s) 217
AlwNI CAGNNNCTG 1 cut(s) 391
AoxI GGCC 2 cut(s) 79, 297
ApeKI GCWGC 3 cut(s) 10, 90, 143
Asp700I GAANNNNTTC 1 cut(s) 158
AspLEI GCGC 1 cut(s) 110
AspS9I GGNCC 1 cut(s) 298
AsuC2I CCSGG 1 cut(s) 171
AsuHPI GGTGA 3 cut(s) 52, 232, 242
BanII GRGCYC 1 cut(s) 266
BbsI GAAGAC 1 cut(s) 293
BbvI GCAGC 3 cut(s) 22, 102, 130
BceAI ACGGC 2 cut(s) 64, 103
BciT130I CCWGG 1 cut(s) 336
BcnI CCSGG 1 cut(s) 171
BcoDI GTCTC 1 cut(s) 105
BfoI RGCGCY 1 cut(s) 111
BglI GCCNNNNNGGC 1 cut(s) 87
BisI GCNGC 5 cut(s) 11, 66, 69, 91, 144
BlsI GCNGC 5 cut(s) 12, 67, 70, 92, 145
Bme1390I CCNGG 2 cut(s) 171, 336
BmgT120I GGNCC 1 cut(s) 298
BmrFI CCNGG 2 cut(s) 171, 336
BpiI GAAGAC 1 cut(s) 293
BpmI CTGGAG 1 cut(s) 318
BpuMI CCSGG 1 cut(s) 171
BsaI GGTCTC 1 cut(s) 105
BsaJI CCNNGG 5 cut(s) 66, 76, 199, 226, 335
Bse118I RCCGGY 1 cut(s) 236
Bse1I ACTGG 1 cut(s) 193
BseBI CCWGG 1 cut(s) 336
BseDI CCNNGG 5 cut(s) 66, 76, 199, 226, 335
BseMII CTCAG 1 cut(s) 116
BseNI ACTGG 1 cut(s) 193
BseXI GCAGC 3 cut(s) 22, 102, 130
Bsh1236I CGCG 1 cut(s) 68
BshFI GGCC 2 cut(s) 81, 299
BsiSI CCGG 2 cut(s) 171, 237
BslFI GGGAC 1 cut(s) 220
BsmAI GTCTC 1 cut(s) 105
BsmFI GGGAC 1 cut(s) 220
BsnI GGCC 2 cut(s) 81, 299
Bso31I GGTCTC 1 cut(s) 105
Bsp1286I GDGCHC 1 cut(s) 266
Bsp143I GATC 1 cut(s) 222
BspACI CCGC 4 cut(s) 55, 63, 66, 68
BspANI GGCC 2 cut(s) 81, 299
BspCNI CTCAG 1 cut(s) 115
BspFNI CGCG 1 cut(s) 68
BspPI GGATC 1 cut(s) 217
BspTNI GGTCTC 1 cut(s) 105
BsrFI RCCGGY 1 cut(s) 236
BsrI ACTGG 1 cut(s) 193
BssAI RCCGGY 1 cut(s) 236
BssECI CCNNGG 5 cut(s) 66, 76, 199, 226, 335
BssMI GATC 1 cut(s) 222
BssT1I CCWWGG 2 cut(s) 199, 226
Bst2UI CCWGG 1 cut(s) 336
Bst4CI ACNGT 1 cut(s) 280
Bst6I CTCTTC 1 cut(s) 129
BstC8I GCNNGC 1 cut(s) 180
BstDEI CTNAG 1 cut(s) 102
BstDSI CCRYGG 1 cut(s) 66
BstFNI CGCG 1 cut(s) 68
BstH2I RGCGCY 1 cut(s) 111
BstHHI GCGC 1 cut(s) 110
BstKTI GATC 1 cut(s) 225
BstMAI GTCTC 1 cut(s) 105
BstMBI GATC 1 cut(s) 222
BstMWI GCNNNNNNNGC 2 cut(s) 87, 270
BstNI CCWGG 1 cut(s) 336
BstSCI CCNGG 2 cut(s) 169, 334
BstUI CGCG 1 cut(s) 68
BstV1I GCAGC 3 cut(s) 22, 102, 130
BstV2I GAAGAC 1 cut(s) 293
BsuRI GGCC 2 cut(s) 81, 299
BtgI CCRYGG 1 cut(s) 66
BtsI GCAGTG 1 cut(s) 347
BtsIMutI CAGTG 1 cut(s) 347
Cac8I GCNNGC 1 cut(s) 180
CaiI CAGNNNCTG 1 cut(s) 391
CfoI GCGC 1 cut(s) 110
Cfr10I RCCGGY 1 cut(s) 236
Cfr13I GGNCC 1 cut(s) 298
Cfr42I CCGCGG 1 cut(s) 69
Csp6I GTAC 1 cut(s) 16
CviAII CATG 1 cut(s) 349
CviJI RGCY 8 cut(s) 81, 130, 143, 236, 264, 299, 325, 364
CviKI_1 RGCY 8 cut(s) 81, 130, 143, 236, 264, 299, 325, 364
CviQI GTAC 1 cut(s) 16
DdeI CTNAG 1 cut(s) 102
DpnI GATC 1 cut(s) 224
DpnII GATC 1 cut(s) 222
EaeI YGGCCR 1 cut(s) 79
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
Eco130I CCWWGG 2 cut(s) 199, 226
Eco24I GRGCYC 1 cut(s) 266
Eco31I GGTCTC 1 cut(s) 105
Eco57I CTGAAG 1 cut(s) 153
EcoO109I RGGNCCY 1 cut(s) 298
EcoRII CCWGG 1 cut(s) 334
EcoT14I CCWWGG 2 cut(s) 199, 226
EcoT38I GRGCYC 1 cut(s) 266
ErhI CCWWGG 2 cut(s) 199, 226
FaeI CATG 1 cut(s) 352
FaiI YATR 6 cut(s) 216, 218, 314, 316, 318, 350
FaqI GGGAC 1 cut(s) 220
FatI CATG 1 cut(s) 348
Fnu4HI GCNGC 5 cut(s) 11, 66, 69, 91, 144
FriOI GRGCYC 1 cut(s) 266
Fsp4HI GCNGC 5 cut(s) 11, 66, 69, 91, 144
GlaI GCGC 1 cut(s) 109
GluI GCNGC 5 cut(s) 11, 66, 69, 91, 144
GsuI CTGGAG 1 cut(s) 318
HaeII RGCGCY 1 cut(s) 111
HaeIII GGCC 2 cut(s) 81, 299
HapII CCGG 2 cut(s) 171, 237
HhaI GCGC 1 cut(s) 110
Hin1II CATG 1 cut(s) 352
Hin6I GCGC 1 cut(s) 108
HinP1I GCGC 1 cut(s) 108
HinfI GANTC 1 cut(s) 331
HpaII CCGG 2 cut(s) 171, 237
HphI GGTGA 3 cut(s) 52, 232, 242
Hpy188I TCNGA 2 cut(s) 105, 153
Hpy99I CGWCG 1 cut(s) 23
HpyAV CCTTC 1 cut(s) 253
HpyCH4III ACNGT 1 cut(s) 280
HpyCH4IV ACGT 1 cut(s) 18
HpyCH4V TGCA 1 cut(s) 345
HpyF10VI GCNNNNNNNGC 2 cut(s) 87, 270
HpyF3I CTNAG 1 cut(s) 102
HpySE526I ACGT 1 cut(s) 18
Hsp92II CATG 1 cut(s) 352
HspAI GCGC 1 cut(s) 108
KspI CCGCGG 1 cut(s) 69
Kzo9I GATC 1 cut(s) 222
Lsp1109I GCAGC 3 cut(s) 22, 102, 130
MaeII ACGT 1 cut(s) 18
MalI GATC 1 cut(s) 224
MboI GATC 1 cut(s) 222
MboII GAAGA 2 cut(s) 146, 298
MhlI GDGCHC 1 cut(s) 266
MlyI GAGTC 1 cut(s) 325
MnlI CCTC 4 cut(s) 68, 86, 245, 311
MroXI GAANNNNTTC 1 cut(s) 158
MseI TTAA 2 cut(s) 126, 282
MspA1I CMGCKG 1 cut(s) 68
MspI CCGG 2 cut(s) 171, 237
MspR9I CCNGG 2 cut(s) 171, 336
MvaI CCWGG 1 cut(s) 336
MvnI CGCG 1 cut(s) 68
MwoI GCNNNNNNNGC 2 cut(s) 87, 270
NciI CCSGG 1 cut(s) 171
NdeII GATC 1 cut(s) 222
NlaIII CATG 1 cut(s) 352
NmeAIII GCCGAG 1 cut(s) 57
PdmI GAANNNNTTC 1 cut(s) 158
PkrI GCNGC 5 cut(s) 12, 67, 70, 92, 145
PleI GAGTC 1 cut(s) 325
PpsI GAGTC 1 cut(s) 325
Psp6I CCWGG 1 cut(s) 334
PspGI CCWGG 1 cut(s) 334
PspPI GGNCC 1 cut(s) 298
PstNI CAGNNNCTG 1 cut(s) 391
RsaI GTAC 1 cut(s) 17
RsaNI GTAC 1 cut(s) 16
SacII CCGCGG 1 cut(s) 69
SaqAI TTAA 2 cut(s) 126, 282
SatI GCNGC 5 cut(s) 11, 66, 69, 91, 144
Sau3AI GATC 1 cut(s) 222
Sau96I GGNCC 1 cut(s) 298
SchI GAGTC 1 cut(s) 325
ScrFI CCNGG 2 cut(s) 171, 336
SduI GDGCHC 1 cut(s) 266
SetI ASST 5 cut(s) 21, 116, 145, 232, 378
Sfr303I CCGCGG 1 cut(s) 69
SgrBI CCGCGG 1 cut(s) 69
SsiI CCGC 4 cut(s) 55, 63, 66, 68
StyD4I CCNGG 2 cut(s) 169, 334
StyI CCWWGG 2 cut(s) 199, 226
TaaI ACNGT 1 cut(s) 280
TaiI ACGT 1 cut(s) 21
TaqI TCGA 5 cut(s) 21, 162, 250, 357, 381
TauI GCSGC 2 cut(s) 68, 71
Tru1I TTAA 2 cut(s) 126, 282
Tru9I TTAA 2 cut(s) 126, 282
TscAI CASTG 1 cut(s) 347
TseI GCWGC 3 cut(s) 10, 90, 143
TspRI CASTG 1 cut(s) 347
XmnI GAANNNNTTC 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.