Prupe.1G504400_v2.0.a1

Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000848
Physical Location & Seq
Reverse (-)
41700199 .. 41702565
2367 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G504400.1

Sequence Viewer

Length: 396 bp
ATGTCGTGGCAGACGTACGTCGATGATCACTTGATGTGCGACATCGAAGGCCAACATCTCACGGCCGCGGCCATCGTCGGTCACGACGGAAGTGTGTGGGCTCAGAGCTCCAGCTTCCCTAAGTTTAAGCCTGAAGAAATTGCGGCGATAATGAAAGATTTCGATGAGCCGGGGTCTCTTGCCCCTACTGGATTGCACCTTGCTGGCACAAAGTATATGGTTATTCAAGGGGAGGGAGGAGCTGTAATTCGTGGAAAGAAGGGTTCTGGTGGCATTACTGTGAAGAAAACTGGCCAGGCTATGATTTTCGGTATATACGAGGAGCCCTTGACACCAGGGCAGTGTAATATGATCGTGGAGAGGTTGGGAGACTACCTGATTGATCAAGGCCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04013 ko04015 ko04810 ko05131 ko05132 map04013 map04015 map04810 map05131 map05132
Pfam Domains
Protein Families
Profilin

Protein Analysis

132

Amino Acids

14.07

Weight (kDa)

5.04

Isoelectric Point (pI)

29.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 68
AciI CCGC 3 cut(s) 66, 68, 143
AcoI YGGCCR 3 cut(s) 63, 69, 292
AcuI CTGAAG 1 cut(s) 153
AfaI GTAC 1 cut(s) 17
AgsI TTSAA 1 cut(s) 227
AjnI CCWGG 2 cut(s) 294, 334
AluBI AGCT 3 cut(s) 108, 114, 242
AluI AGCT 3 cut(s) 108, 114, 242
Alw21I GWGCWC 1 cut(s) 110
Alw26I GTCTC 2 cut(s) 180, 363
AoxI GGCC 5 cut(s) 49, 63, 69, 292, 388
Asp700I GAANNNNTTC 1 cut(s) 158
AsuC2I CCSGG 1 cut(s) 171
BalI TGGCCA 1 cut(s) 294
BanII GRGCYC 3 cut(s) 103, 110, 327
Bbv12I GWGCWC 1 cut(s) 110
BccI CCATC 1 cut(s) 80
BceAI ACGGC 1 cut(s) 78
BciT130I CCWGG 2 cut(s) 296, 336
BclI TGATCA 2 cut(s) 25, 382
BcnI CCSGG 1 cut(s) 171
BcoDI GTCTC 2 cut(s) 180, 363
BfmI CTRYAG 1 cut(s) 392
BisI GCNGC 3 cut(s) 66, 69, 144
BlsI GCNGC 3 cut(s) 67, 70, 145
Bme1390I CCNGG 3 cut(s) 171, 296, 336
BmiI GGNNCC 1 cut(s) 324
BmrFI CCNGG 3 cut(s) 171, 296, 336
BoxI GACNNNNGTC 1 cut(s) 17
BpmI CTGGAG 1 cut(s) 94
BpuMI CCSGG 1 cut(s) 171
BsaI GGTCTC 1 cut(s) 180
BsaJI CCNNGG 3 cut(s) 66, 170, 335
BsaXI ACNNNNNCTCC 2 cut(s) 228, 258
Bse1I ACTGG 2 cut(s) 193, 295
BseBI CCWGG 2 cut(s) 296, 336
BseDI CCNNGG 3 cut(s) 66, 170, 335
BseMII CTCAG 1 cut(s) 116
BseNI ACTGG 2 cut(s) 193, 295
BseRI GAGGAG 2 cut(s) 252, 335
BseX3I CGGCCG 1 cut(s) 63
Bsh1236I CGCG 1 cut(s) 68
Bsh1285I CGRYCG 1 cut(s) 66
BshFI GGCC 5 cut(s) 51, 65, 71, 294, 390
BsiEI CGRYCG 1 cut(s) 66
BsiHKAI GWGCWC 1 cut(s) 110
BsiSI CCGG 1 cut(s) 170
BsiWI CGTACG 1 cut(s) 15
BsmAI GTCTC 2 cut(s) 180, 363
BsnI GGCC 5 cut(s) 51, 65, 71, 294, 390
Bso31I GGTCTC 1 cut(s) 180
Bsp1286I GDGCHC 3 cut(s) 103, 110, 327
Bsp143I GATC 3 cut(s) 25, 351, 382
BspACI CCGC 3 cut(s) 66, 68, 143
BspANI GGCC 5 cut(s) 51, 65, 71, 294, 390
BspCNI CTCAG 1 cut(s) 115
BspFNI CGCG 1 cut(s) 68
BspLI GGNNCC 1 cut(s) 324
BspTNI GGTCTC 1 cut(s) 180
BsrI ACTGG 2 cut(s) 193, 295
BssECI CCNNGG 3 cut(s) 66, 170, 335
BssMI GATC 3 cut(s) 25, 351, 382
Bst2UI CCWGG 2 cut(s) 296, 336
Bst4CI ACNGT 1 cut(s) 280
BstC8I GCNNGC 1 cut(s) 205
BstDEI CTNAG 2 cut(s) 102, 120
BstDSI CCRYGG 1 cut(s) 66
BstFNI CGCG 1 cut(s) 68
BstKTI GATC 3 cut(s) 28, 354, 385
BstMAI GTCTC 2 cut(s) 180, 363
BstMBI GATC 3 cut(s) 25, 351, 382
BstMCI CGRYCG 1 cut(s) 66
BstNI CCWGG 2 cut(s) 296, 336
BstPAI GACNNNNGTC 1 cut(s) 17
BstSCI CCNGG 3 cut(s) 169, 294, 334
BstSFI CTRYAG 1 cut(s) 392
BstUI CGCG 1 cut(s) 68
BstZI CGGCCG 1 cut(s) 63
BsuRI GGCC 5 cut(s) 51, 65, 71, 294, 390
BtgI CCRYGG 1 cut(s) 66
BtsI GCAGTG 1 cut(s) 347
BtsIMutI CAGTG 1 cut(s) 347
Cac8I GCNNGC 1 cut(s) 205
Cfr42I CCGCGG 1 cut(s) 69
Csp6I GTAC 1 cut(s) 16
CviQI GTAC 1 cut(s) 16
DdeI CTNAG 2 cut(s) 102, 120
DpnI GATC 3 cut(s) 27, 353, 384
DpnII GATC 3 cut(s) 25, 351, 382
EaeI YGGCCR 3 cut(s) 63, 69, 292
EagI CGGCCG 1 cut(s) 63
Ecl136II GAGCTC 1 cut(s) 108
EclXI CGGCCG 1 cut(s) 63
Eco147I AGGCCT 1 cut(s) 390
Eco24I GRGCYC 3 cut(s) 103, 110, 327
Eco31I GGTCTC 1 cut(s) 180
Eco52I CGGCCG 1 cut(s) 63
Eco53kI GAGCTC 1 cut(s) 108
Eco57I CTGAAG 1 cut(s) 153
EcoICRI GAGCTC 1 cut(s) 108
EcoRII CCWGG 2 cut(s) 294, 334
EcoT38I GRGCYC 3 cut(s) 103, 110, 327
FaiI YATR 6 cut(s) 216, 218, 302, 314, 316, 350
FbaI TGATCA 2 cut(s) 25, 382
Fnu4HI GCNGC 3 cut(s) 66, 69, 144
FriOI GRGCYC 3 cut(s) 103, 110, 327
Fsp4HI GCNGC 3 cut(s) 66, 69, 144
GluI GCNGC 3 cut(s) 66, 69, 144
GsuI CTGGAG 1 cut(s) 94
HaeIII GGCC 5 cut(s) 51, 65, 71, 294, 390
HapII CCGG 1 cut(s) 170
HpaII CCGG 1 cut(s) 170
Hpy188I TCNGA 1 cut(s) 105
Hpy188III TCNNGA 1 cut(s) 83
Hpy99I CGWCG 3 cut(s) 23, 80, 89
HpyAV CCTTC 2 cut(s) 41, 253
HpyCH4III ACNGT 1 cut(s) 280
HpyCH4IV ACGT 2 cut(s) 14, 18
HpyCH4V TGCA 1 cut(s) 196
HpyF3I CTNAG 2 cut(s) 102, 120
HpySE526I ACGT 2 cut(s) 14, 18
Ksp22I TGATCA 2 cut(s) 25, 382
KspI CCGCGG 1 cut(s) 69
Kzo9I GATC 3 cut(s) 25, 351, 382
LmnI GCTCC 3 cut(s) 113, 239, 322
MaeII ACGT 2 cut(s) 14, 18
MaeIII GTNAC 1 cut(s) 80
MalI GATC 3 cut(s) 27, 353, 384
MboI GATC 3 cut(s) 25, 351, 382
MboII GAAGA 2 cut(s) 146, 295
MhlI GDGCHC 3 cut(s) 103, 110, 327
MlsI TGGCCA 1 cut(s) 294
MluCI AATT 2 cut(s) 138, 246
MluNI TGGCCA 1 cut(s) 294
MnlI CCTC 4 cut(s) 226, 230, 313, 354
Mox20I TGGCCA 1 cut(s) 294
MroXI GAANNNNTTC 1 cut(s) 158
MscI TGGCCA 1 cut(s) 294
MseI TTAA 1 cut(s) 126
MslI CAYNNNNRTG 1 cut(s) 278
Msp20I TGGCCA 1 cut(s) 294
MspA1I CMGCKG 1 cut(s) 68
MspI CCGG 1 cut(s) 170
MspR9I CCNGG 3 cut(s) 171, 296, 336
MvaI CCWGG 2 cut(s) 296, 336
MvnI CGCG 1 cut(s) 68
NciI CCSGG 1 cut(s) 171
NdeII GATC 3 cut(s) 25, 351, 382
NlaIV GGNNCC 1 cut(s) 324
NmuCI GTSAC 1 cut(s) 80
PceI AGGCCT 1 cut(s) 390
PcsI WCGNNNNNNNCGW 3 cut(s) 11, 81, 315
PdmI GAANNNNTTC 1 cut(s) 158
Pfl23II CGTACG 1 cut(s) 15
PkrI GCNGC 3 cut(s) 67, 70, 145
PshAI GACNNNNGTC 1 cut(s) 17
Psp124BI GAGCTC 1 cut(s) 110
Psp6I CCWGG 2 cut(s) 294, 334
PspGI CCWGG 2 cut(s) 294, 334
PspLI CGTACG 1 cut(s) 15
PspN4I GGNNCC 1 cut(s) 324
RsaI GTAC 1 cut(s) 17
RsaNI GTAC 1 cut(s) 16
RseI CAYNNNNRTG 1 cut(s) 278
SacI GAGCTC 1 cut(s) 110
SacII CCGCGG 1 cut(s) 69
SaqAI TTAA 1 cut(s) 126
SatI GCNGC 3 cut(s) 66, 69, 144
Sau3AI GATC 3 cut(s) 25, 351, 382
ScrFI CCNGG 3 cut(s) 171, 296, 336
SduI GDGCHC 3 cut(s) 103, 110, 327
SetI ASST 8 cut(s) 17, 21, 110, 116, 201, 244, 365, 378
SfcI CTRYAG 1 cut(s) 392
Sfr303I CCGCGG 1 cut(s) 69
SgrBI CCGCGG 1 cut(s) 69
SmiMI CAYNNNNRTG 1 cut(s) 278
Sse9I AATT 2 cut(s) 138, 246
SseBI AGGCCT 1 cut(s) 390
SsiI CCGC 3 cut(s) 66, 68, 143
SstI GAGCTC 1 cut(s) 110
StuI AGGCCT 1 cut(s) 390
StyD4I CCNGG 3 cut(s) 169, 294, 334
TaaI ACNGT 1 cut(s) 280
TaiI ACGT 2 cut(s) 17, 21
TaqI TCGA 3 cut(s) 21, 45, 162
TaqII GACCGA 1 cut(s) 68
TasI AATT 2 cut(s) 138, 246
TauI GCSGC 3 cut(s) 68, 71, 146
Tru1I TTAA 1 cut(s) 126
Tru9I TTAA 1 cut(s) 126
TscAI CASTG 1 cut(s) 347
TseFI GTSAC 1 cut(s) 80
Tsp45I GTSAC 1 cut(s) 80
TspDTI ATGAA 1 cut(s) 167
TspGWI ACGGA 1 cut(s) 102
TspRI CASTG 1 cut(s) 347
XmnI GAANNNNTTC 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.