Prupe.1G512300_v2.0.a1

Belongs to the glycosyl hydrolase 5 (cellulase A) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
42176755 .. 42180224
3470 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G512300.1

Sequence Viewer

Length: 1530 bp
ATGGCTTTCAGTTCAAGGACATGGCTGCTAAGCTCAGCTGTCCTTTTTTCTATCATGTCTCTTTCTTGTGGGAGAGTGCCTCCCAATTCAGGTCCAGTAAAAGCTGTTAACCTTGGAGGCTGGCTGGTCACAGAAGGCTGGATCAAACCGTCTCTTTTCGATGGCATTCCCAACAAAGATTTCTTGGATGGAACTGAACTTCAGTTTAAATCTGTGACAACCGGGAAATACCTTGCTGCTGAGTTAGGAGGAGGAAGCATCATAGTTGCAAACAGAACATCAGCTTCAGGCTGGGAAAGATTTAGGCTGTGGAGGATCAATGAGACCACATTTAACTTCAGGGTCTTCAACAAAGATTTTGTGGGGCTTGATGTCAAGGGCAATGGAGCTCAGGTGGTGGCTGTTTCGAAAACACCGGGTAGCTCAGAGACGTTTGAGATCATAAGGAAGCCTGATGATTCGAGCCGGGTTCGAATCAAAGCACCCAATGGATTCTTCTTGCAGGCCAAGACAGAGGATTTGGTGACAGCTGATTATGCAGGGAGTGGTAGTGGATGGGGAAACAATGATCCATCTGTTTTTGTGATTAGCTTTTCTGGAAAATTGGAGGGAGAGTTTCAAGTAACAAATGGTTATGGTCCAAAGAAGGCTCCACAAGTTATGCAGGAGCATTGGAACACATTCATAGTTGAAGATGACTTCCACTTCATAAAAACAAATGGATTAAATGCTGTGAGAATACCAGTTGGTTGGTGGATTGCAAGTGATCCAACGCCCCCTGACCCTTATGTTGGTGGTTCCTTGCTAGCGTTAGACAAAGCCTTCTTGTGGGCACAGAAATATGGATTAAAGGTCATAATTGACCTCCATGCAGCACCAGGCTCTCAAAATGGTTTTGAACACAGTGCTTCTAGAGATGGCTCTCAGGAATGGGGCCAAACAGATGAAAACATACAGCAGACAGTTGATGTCATTGATTTCTTAACTGCCAGGTATGCTAGGAGCCCAAGCCTATATGCAGTTGAGCTCATCAACGAGCCTTTCTCCCCAGGAGCATCTCTACAGAACGTGACCAAGTTCTACAAGGCTGGTTATGCTGCCGTTCGCAAGCACTCCTCCACAGCATATGTGGTGTTTTCAAACAGGCTAGGACCAATGGAGCCAAGGGAGCTGTTCCCACTTGCCAATGGCTTAAAGGGTTCTGTGATTGATGTCCATTACTATAGCCTCTTTGTGAGCGCTTTTGACAACTTGACTGTCCAACAGAACATAGACTTCATCCACACCAATCGGTCCCAGGAATTGAATTATGTTACCACATCAAATGGCCCTCTCACTTTTGTTGGTGAATGGGTCGCTGAGTGGAAAGTTACAGGGGCAACAAAGGAAGATTACCAAAGATTTGCAAATGCTCAATTGGAAGTATGGGCGAGAGCAACATTTGGGTGGGCTTATTGGACTCTTAAGAACGTCAATAAGCATTGGAGTCTTGAGTGGATGATAAAGAATGGTTATATAAAGCTAACTTAG

Protein Analysis

510

Amino Acids

56.58

Weight (kDa)

6.73

Isoelectric Point (pI)

26.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 4 cut(s) 149, 323, 563, 761
AcuI CTGAAG 3 cut(s) 185, 270, 322
AfeI AGCGCT 1 cut(s) 1240
AfiI CCNNNNNNNGG 3 cut(s) 89, 791, 828
AflII CTTAAG 1 cut(s) 1463
AgsI TTSAA 7 cut(s) 15, 349, 620, 692, 899, 1140, 1306
AjnI CCWGG 4 cut(s) 877, 989, 1048, 1296
AjuI GAANNNNNNNTTGG 4 cut(s) 164, 196, 479, 511
Alw21I GWGCWC 2 cut(s) 391, 1029
Alw26I GTCTC 4 cut(s) 63, 156, 317, 422
AlwI GGATC 4 cut(s) 149, 323, 563, 761
Aor51HI AGCGCT 1 cut(s) 1240
AoxI GGCC 3 cut(s) 504, 934, 1327
ApeKI GCWGC 4 cut(s) 25, 236, 872, 1097
ArsI GACNNNNNNTTYG 2 cut(s) 502, 534
Asp700I GAANNNNTTC 1 cut(s) 680
AspLEI GCGC 1 cut(s) 1241
AspS9I GGNCC 6 cut(s) 92, 638, 934, 1151, 1293, 1328
AsuC2I CCSGG 3 cut(s) 223, 417, 467
AsuHPI GGTGA 2 cut(s) 535, 1358
AsuII TTCGAA 2 cut(s) 407, 472
AsuNHI GCTAGC 1 cut(s) 805
AvaII GGWCC 4 cut(s) 92, 638, 1151, 1293
BaeGI GKGCMC 1 cut(s) 835
BanII GRGCYC 3 cut(s) 391, 1007, 1029
BbsI GAAGAC 1 cut(s) 337
Bbv12I GWGCWC 2 cut(s) 391, 1029
BbvI GCAGC 4 cut(s) 12, 223, 884, 1084
BccI CCATC 5 cut(s) 155, 182, 549, 580, 911
BceAI ACGGC 1 cut(s) 1085
BciT130I CCWGG 4 cut(s) 879, 991, 1050, 1298
BcnI CCSGG 3 cut(s) 223, 417, 467
BcoDI GTCTC 4 cut(s) 63, 156, 317, 422
BfaI CTAG 4 cut(s) 806, 912, 999, 1148
BfmI CTRYAG 2 cut(s) 1061, 1222
BfoI RGCGCY 1 cut(s) 1242
BfrI CTTAAG 1 cut(s) 1463
BisI GCNGC 4 cut(s) 26, 237, 873, 1098
BlpI GCTNAGC 2 cut(s) 29, 34
BlsI GCNGC 4 cut(s) 27, 238, 874, 1099
Bme1390I CCNGG 7 cut(s) 223, 417, 467, 879, 991, 1050, 1298
Bme18I GGWCC 4 cut(s) 92, 638, 1151, 1293
BmgT120I GGNCC 6 cut(s) 92, 638, 934, 1151, 1293, 1328
BmiI GGNNCC 6 cut(s) 651, 799, 935, 1004, 1161, 1295
BmrFI CCNGG 7 cut(s) 223, 417, 467, 879, 991, 1050, 1298
BmsI GCATC 2 cut(s) 267, 1064
BmtI GCTAGC 1 cut(s) 809
BpiI GAAGAC 1 cut(s) 337
BplI GAGNNNNNCTC 4 cut(s) 64, 96, 1028, 1060
Bpu10I CCTNAGC 1 cut(s) 390
Bpu1102I GCTNAGC 2 cut(s) 29, 34
Bpu14I TTCGAA 2 cut(s) 407, 472
BpuEI CTTGAG 1 cut(s) 1511
BpuMI CCSGG 3 cut(s) 223, 417, 467
BsaI GGTCTC 1 cut(s) 317
BsaJI CCNNGG 4 cut(s) 112, 1048, 1163, 1296
BsaXI ACNNNNNCTCC 6 cut(s) 378, 408, 535, 565, 599, 629
Bsc4I CCNNNNNNNGG 3 cut(s) 89, 791, 828
Bse1I ACTGG 2 cut(s) 95, 743
Bse3DI GCAATG 1 cut(s) 388
BseBI CCWGG 4 cut(s) 879, 991, 1050, 1298
BseDI CCNNGG 4 cut(s) 112, 1048, 1163, 1296
BseGI GGATG 4 cut(s) 193, 560, 1278, 1503
BseLI CCNNNNNNNGG 3 cut(s) 89, 791, 828
BseMI GCAATG 1 cut(s) 388
BseMII CTCAG 6 cut(s) 48, 231, 404, 438, 938, 1350
BseNI ACTGG 2 cut(s) 95, 743
BseRI GAGGAG 2 cut(s) 264, 1105
BseSI GKGCMC 1 cut(s) 835
BseXI GCAGC 4 cut(s) 12, 223, 884, 1084
BseYI CCCAGC 1 cut(s) 291
BshFI GGCC 3 cut(s) 506, 936, 1329
BsiHKAI GWGCWC 2 cut(s) 391, 1029
BsiSI CCGG 3 cut(s) 222, 416, 466
BslFI GGGAC 1 cut(s) 1279
BslI CCNNNNNNNGG 3 cut(s) 89, 791, 828
BsmAI GTCTC 4 cut(s) 63, 156, 317, 422
BsmBI CGTCTC 2 cut(s) 156, 422
BsmFI GGGAC 1 cut(s) 1279
BsmI GAATGC 1 cut(s) 165
BsnI GGCC 3 cut(s) 506, 936, 1329
Bso31I GGTCTC 1 cut(s) 317
Bsp119I TTCGAA 2 cut(s) 407, 472
Bsp1286I GDGCHC 4 cut(s) 391, 835, 1007, 1029
Bsp143I GATC 5 cut(s) 141, 315, 438, 568, 766
Bsp1720I GCTNAGC 2 cut(s) 29, 34
BspANI GGCC 3 cut(s) 506, 936, 1329
BspCNI CTCAG 6 cut(s) 47, 232, 403, 437, 937, 1351
BspLI GGNNCC 6 cut(s) 651, 799, 935, 1004, 1161, 1295
BspOI GCTAGC 1 cut(s) 809
BspPI GGATC 4 cut(s) 149, 323, 563, 761
BspT104I TTCGAA 2 cut(s) 407, 472
BspTI CTTAAG 1 cut(s) 1463
BspTNI GGTCTC 1 cut(s) 317
BsrDI GCAATG 1 cut(s) 388
BsrI ACTGG 2 cut(s) 95, 743
BssECI CCNNGG 4 cut(s) 112, 1048, 1163, 1296
BssMI GATC 5 cut(s) 141, 315, 438, 568, 766
BssT1I CCWWGG 2 cut(s) 112, 1163
Bst2UI CCWGG 4 cut(s) 879, 991, 1050, 1298
Bst4CI ACNGT 4 cut(s) 150, 905, 964, 1258
BstAFI CTTAAG 1 cut(s) 1463
BstBI TTCGAA 2 cut(s) 407, 472
BstC8I GCNNGC 4 cut(s) 122, 504, 807, 1109
BstDEI CTNAG 8 cut(s) 29, 34, 240, 390, 424, 924, 1359, 1527
BstF5I GGATG 4 cut(s) 193, 560, 1278, 1503
BstH2I RGCGCY 1 cut(s) 1242
BstHHI GCGC 1 cut(s) 1241
BstKTI GATC 5 cut(s) 144, 318, 441, 571, 769
BstMAI GTCTC 4 cut(s) 63, 156, 317, 422
BstMBI GATC 5 cut(s) 141, 315, 438, 568, 766
BstMWI GCNNNNNNNGC 4 cut(s) 536, 995, 1094, 1168
BstNI CCWGG 4 cut(s) 879, 991, 1050, 1298
BstSCI CCNGG 7 cut(s) 221, 415, 465, 877, 989, 1048, 1296
BstSFI CTRYAG 2 cut(s) 1061, 1222
BstSLI GKGCMC 1 cut(s) 835
BstV1I GCAGC 4 cut(s) 12, 223, 884, 1084
BstV2I GAAGAC 1 cut(s) 337
BstXI CCANNNNNNTGG 1 cut(s) 750
BsuRI GGCC 3 cut(s) 506, 936, 1329
BtsCI GGATG 4 cut(s) 193, 560, 1278, 1503
BtsIMutI CAGTG 1 cut(s) 910
Cac8I GCNNGC 4 cut(s) 122, 504, 807, 1109
CfoI GCGC 1 cut(s) 1241
Cfr13I GGNCC 6 cut(s) 92, 638, 934, 1151, 1293, 1328
CviAII CATG 3 cut(s) 21, 55, 869
DdeI CTNAG 8 cut(s) 29, 34, 240, 390, 424, 924, 1359, 1527
DpnI GATC 5 cut(s) 143, 317, 440, 570, 768
DpnII GATC 5 cut(s) 141, 315, 438, 568, 766
DraI TTTAAA 1 cut(s) 208
Ecl136II GAGCTC 2 cut(s) 389, 1027
Eco130I CCWWGG 2 cut(s) 112, 1163
Eco24I GRGCYC 3 cut(s) 391, 1007, 1029
Eco31I GGTCTC 1 cut(s) 317
Eco47I GGWCC 4 cut(s) 92, 638, 1151, 1293
Eco47III AGCGCT 1 cut(s) 1240
Eco53kI GAGCTC 2 cut(s) 389, 1027
Eco57I CTGAAG 3 cut(s) 185, 270, 322
EcoICRI GAGCTC 2 cut(s) 389, 1027
EcoRII CCWGG 4 cut(s) 877, 989, 1048, 1296
EcoT14I CCWWGG 2 cut(s) 112, 1163
EcoT38I GRGCYC 3 cut(s) 391, 1007, 1029
ErhI CCWWGG 2 cut(s) 112, 1163
Esp3I CGTCTC 2 cut(s) 156, 422
FaeI CATG 3 cut(s) 24, 58, 872
FaqI GGGAC 1 cut(s) 1279
FatI CATG 3 cut(s) 20, 54, 868
FauNDI CATATG 1 cut(s) 1126
Fnu4HI GCNGC 4 cut(s) 26, 237, 873, 1098
FokI GGATG 4 cut(s) 200, 567, 1265, 1510
FriOI GRGCYC 3 cut(s) 391, 1007, 1029
Fsp4HI GCNGC 4 cut(s) 26, 237, 873, 1098
FspBI CTAG 4 cut(s) 806, 912, 999, 1148
GlaI GCGC 1 cut(s) 1240
GluI GCNGC 4 cut(s) 26, 237, 873, 1098
GsaI CCCAGC 1 cut(s) 295
HaeII RGCGCY 1 cut(s) 1242
HaeIII GGCC 3 cut(s) 506, 936, 1329
HapII CCGG 3 cut(s) 222, 416, 466
HhaI GCGC 1 cut(s) 1241
Hin1II CATG 3 cut(s) 24, 58, 872
Hin6I GCGC 1 cut(s) 1239
HinP1I GCGC 1 cut(s) 1239
HincII GTYRAC 1 cut(s) 109
HindII GTYRAC 1 cut(s) 109
HinfI GANTC 5 cut(s) 458, 474, 492, 1459, 1486
HpaI GTTAAC 1 cut(s) 109
HpaII CCGG 3 cut(s) 222, 416, 466
HphI GGTGA 2 cut(s) 535, 1358
Hpy166II GTNNAC 1 cut(s) 109
Hpy188I TCNGA 1 cut(s) 427
Hpy188III TCNNGA 4 cut(s) 597, 912, 926, 1490
Hpy8I GTNNAC 1 cut(s) 109
HpyAV CCTTC 3 cut(s) 128, 640, 832
HpyCH4III ACNGT 4 cut(s) 150, 905, 964, 1258
HpyCH4IV ACGT 3 cut(s) 431, 1068, 1470
HpyCH4V TGCA 8 cut(s) 269, 502, 539, 664, 761, 872, 1019, 1406
HpyF10VI GCNNNNNNNGC 4 cut(s) 536, 995, 1094, 1168
HpyF3I CTNAG 8 cut(s) 29, 34, 240, 390, 424, 924, 1359, 1527
HpySE526I ACGT 3 cut(s) 431, 1068, 1470
Hsp92II CATG 3 cut(s) 24, 58, 872
HspAI GCGC 1 cut(s) 1239
KspAI GTTAAC 1 cut(s) 109
Kzo9I GATC 5 cut(s) 141, 315, 438, 568, 766
LmnI GCTCC 7 cut(s) 386, 655, 667, 1002, 1052, 1159, 1168
Lsp1109I GCAGC 4 cut(s) 12, 223, 884, 1084
LweI GCATC 2 cut(s) 267, 1064
MaeI CTAG 4 cut(s) 806, 912, 999, 1148
MaeII ACGT 3 cut(s) 431, 1068, 1470
MaeIII GTNAC 7 cut(s) 127, 214, 523, 622, 1069, 1312, 1369
MalI GATC 5 cut(s) 143, 317, 440, 570, 768
MboI GATC 5 cut(s) 141, 315, 438, 568, 766
MboII GAAGA 4 cut(s) 337, 487, 704, 1400
MfeI CAATTG 1 cut(s) 1415
MhlI GDGCHC 4 cut(s) 391, 835, 1007, 1029
MluCI AATT 6 cut(s) 85, 602, 858, 1301, 1306, 1415
MlyI GAGTC 2 cut(s) 1453, 1495
MmeI TCCRAC 2 cut(s) 794, 1285
MroXI GAANNNNTTC 1 cut(s) 680
MseI TTAA 8 cut(s) 108, 207, 333, 725, 848, 983, 1193, 1464
MslI CAYNNNNRTG 1 cut(s) 1444
MspA1I CMGCKG 2 cut(s) 38, 530
MspCI CTTAAG 1 cut(s) 1463
MspI CCGG 3 cut(s) 222, 416, 466
MspR9I CCNGG 7 cut(s) 223, 417, 467, 879, 991, 1050, 1298
MunI CAATTG 1 cut(s) 1415
Mva1269I GAATGC 1 cut(s) 165
MvaI CCWGG 4 cut(s) 879, 991, 1050, 1298
MwoI GCNNNNNNNGC 4 cut(s) 536, 995, 1094, 1168
NciI CCSGG 3 cut(s) 223, 417, 467
NdeI CATATG 1 cut(s) 1126
NdeII GATC 5 cut(s) 141, 315, 438, 568, 766
NheI GCTAGC 1 cut(s) 805
NlaIII CATG 3 cut(s) 24, 58, 872
NlaIV GGNNCC 6 cut(s) 651, 799, 935, 1004, 1161, 1295
NmuCI GTSAC 4 cut(s) 127, 214, 523, 1069
NspV TTCGAA 2 cut(s) 407, 472
PctI GAATGC 1 cut(s) 165
PdmI GAANNNNTTC 1 cut(s) 680
PfeI GAWTC 3 cut(s) 458, 474, 492
PkrI GCNGC 4 cut(s) 27, 238, 874, 1099
PleI GAGTC 2 cut(s) 1453, 1494
PpsI GAGTC 2 cut(s) 1453, 1494
Psp124BI GAGCTC 2 cut(s) 391, 1029
Psp6I CCWGG 4 cut(s) 877, 989, 1048, 1296
PspFI CCCAGC 1 cut(s) 291
PspGI CCWGG 4 cut(s) 877, 989, 1048, 1296
PspN4I GGNNCC 6 cut(s) 651, 799, 935, 1004, 1161, 1295
PspPI GGNCC 6 cut(s) 92, 638, 934, 1151, 1293, 1328
PvuII CAGCTG 2 cut(s) 38, 530
RseI CAYNNNNRTG 1 cut(s) 1444
SacI GAGCTC 2 cut(s) 391, 1029
SaqAI TTAA 8 cut(s) 108, 207, 333, 725, 848, 983, 1193, 1464
SatI GCNGC 4 cut(s) 26, 237, 873, 1098
Sau3AI GATC 5 cut(s) 141, 315, 438, 568, 766
Sau96I GGNCC 6 cut(s) 92, 638, 934, 1151, 1293, 1328
SchI GAGTC 2 cut(s) 1453, 1495
ScrFI CCNGG 7 cut(s) 223, 417, 467, 879, 991, 1050, 1298
SduI GDGCHC 4 cut(s) 391, 835, 1007, 1029
SfaNI GCATC 2 cut(s) 267, 1064
SfcI CTRYAG 2 cut(s) 1061, 1222
SfuI TTCGAA 2 cut(s) 407, 472
SinI GGWCC 4 cut(s) 92, 638, 1151, 1293
SmiMI CAYNNNNRTG 1 cut(s) 1444
SmlI CTYRAG 2 cut(s) 1463, 1490
SmoI CTYRAG 2 cut(s) 1463, 1490
Sse9I AATT 6 cut(s) 85, 602, 858, 1301, 1306, 1415
SspMI CTAG 4 cut(s) 806, 912, 999, 1148
SstI GAGCTC 2 cut(s) 391, 1029
StyD4I CCNGG 7 cut(s) 221, 415, 465, 877, 989, 1048, 1296
StyI CCWWGG 2 cut(s) 112, 1163
TaaI ACNGT 4 cut(s) 150, 905, 964, 1258
TaiI ACGT 3 cut(s) 434, 1071, 1473
TaqI TCGA 4 cut(s) 159, 407, 461, 472
TaqII GACCGA 1 cut(s) 1281
TasI AATT 6 cut(s) 85, 602, 858, 1301, 1306, 1415
TfiI GAWTC 3 cut(s) 458, 474, 492
Tru1I TTAA 8 cut(s) 108, 207, 333, 725, 848, 983, 1193, 1464
Tru9I TTAA 8 cut(s) 108, 207, 333, 725, 848, 983, 1193, 1464
TscAI CASTG 1 cut(s) 910
TseFI GTSAC 4 cut(s) 127, 214, 523, 1069
TseI GCWGC 4 cut(s) 25, 236, 872, 1097
Tsp45I GTSAC 4 cut(s) 127, 214, 523, 1069
TspDTI ATGAA 4 cut(s) 673, 697, 960, 1267
TspRI CASTG 1 cut(s) 910
Vha464I CTTAAG 1 cut(s) 1463
VpaK11BI GGWCC 4 cut(s) 92, 638, 1151, 1293
XbaI TCTAGA 1 cut(s) 911
XcmI CCANNNNNNNNNTGG 2 cut(s) 750, 1126
XmnI GAANNNNTTC 1 cut(s) 680
XspI CTAG 4 cut(s) 806, 912, 999, 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.