Prupe.6G181100_v2.0.a1

Belongs to the glycosyl hydrolase 5 (cellulase A) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
18768601 .. 18771819
3219 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G181100.1

Sequence Viewer

Length: 1530 bp
ATGGCATATTTTTACTTTAAGATGTACCATCTTCTGGCTTTGTACCTGATCTCATGTGTTGTTCCTCTTTCCTTAGCACAAGACTTCAATTTGCCATTCAAAGCTGTGAATCTTGGGAATTGGCTTGTTACAGAGGGTTGGATGAAACCTTCTCTCTATGATGGCATTCCCAACAATGACCTTTTGGATGGAACACAAGTTCAATTCAAGTCCACAAAGCTGCAGAAGTATATTGCACCAGAAAATGGGGGTGGCAGTGGTTCTGTTGTTGTTGTCAACCGTGATTCGGCCTCTGGTTGGGAAACTTTCAGGTTGTGGAGAATTGATGAATCATCTTTCAATTTGAGAGTGTTCAACAAGCAGTTTGTGGGATTGCCCAACCAAGACCAGGGAACCGGCCTAATTGCAGTTTCAGATTCACCTGGAAGCACCGAAACATTTCGGATTGTAAGGAATGATGGTGATCAAAATAGAGTTCGCATTCAAGCATCCAATGGTTTATTTCTGCAGGCAACATCAGAGACACAATTGACTGCAGATTATGGAGGCTCAGGTTGGGAAGATGATAATCCATCTGTCTTCATAATGACAATATTAAGTGACAAGACCTTAAGAGGTGAATACCAAATCACAAATGGTTATGGTCCAGATAAGGCTCCTCAAGTCCTGCAGGATCACTGGAACAGTTACATCACCGAAGACGATTTCAGGTTCTTATCATCGAACGGCTTGAATGCGGTGAGGATCCCAGTTGGATGGTGGATTGCAAAAGATCCAACACCACCTAAGCCTTTTGTTGGAGGCTCCTTGCAAGCCCTGGACAATGCTTTCACATGGGCACAAAACAATGGGCTGAAGGTAATTGTAGATCTTCATGCAGTTGAAGGGTCCCAAAACGCCAATGACCACAGTGCAACAAGAGATGGCTACCAGGAATGGGGAGATTCCAACATACAAGACACTGTGGCAGTCATAGATTTCTTAGCATCAAGATATGCTAATCATCCAGCTCTTGCAGCAGTTGAGTTAATGAATGAGCCTATGGCACCTGGCGTCAATCTAGACAGCCTAAAAAATTATTACAAAGCTGGTTATGAAGCTGTACGGAAGCACACTTCAAGCGCTTATGTGATCTTATCAAACAGATTGGGACCTGCAGATGCAAAGGAGCTTCTCTCATTTGCCGGAGGCCTCGATCGCGTAGCGATAGACGTGCATTTCTATAGCCTGTACTCGGACATGTTCAACAGCTTCAGTGTGCAACAAAATGTGGATTTCATCTACAACCAACGAGCTTCTGATCTCGATGCTGTGACCACTTCCAATGGACCCCTCACTTTTGTTGGAGAATGGGTTGCAGAATGGGCGATAAATGGAGCGTCAATAGAAGACTACCAGAGATTTGCAAAAGCCCAAATAGATGTTTATGGGCGTGCCACTTTTGGATGGGCATATTGGGCTTACAAGTGTCAATACGATCACTGGGGTCTTAGGTGGATGATCGAGAATAACTACATAAAACTCAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

510

Amino Acids

56.98

Weight (kDa)

4.9

Isoelectric Point (pI)

28.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1162
AccB1I GGYRCC 1 cut(s) 1045
AccB7I CCANNNNNTGG 2 cut(s) 34, 245
AccII CGCG 1 cut(s) 1200
AciI CCGC 1 cut(s) 737
AclWI GGATC 4 cut(s) 681, 739, 752, 767
AcuI CTGAAG 2 cut(s) 875, 1237
AcyI GRCGYC 1 cut(s) 1053
AfaI GTAC 4 cut(s) 26, 44, 1104, 1232
AfeI AGCGCT 1 cut(s) 1123
AfiI CCNNNNNNNGG 8 cut(s) 34, 245, 286, 297, 388, 797, 937, 1234
AflII CTTAAG 1 cut(s) 610
AflIII ACRYGT 1 cut(s) 1239
AjiI CACGTC 1 cut(s) 1213
AjnI CCWGG 5 cut(s) 387, 421, 816, 930, 1048
AloI GAACNNNNNNTCC 2 cut(s) 183, 215
AluBI AGCT 8 cut(s) 104, 220, 1010, 1088, 1100, 1171, 1251, 1295
AluI AGCT 8 cut(s) 104, 220, 1010, 1088, 1100, 1171, 1251, 1295
Alw26I GTCTC 1 cut(s) 515
AlwI GGATC 4 cut(s) 681, 739, 752, 767
Aor51HI AGCGCT 1 cut(s) 1123
AoxI GGCC 3 cut(s) 288, 397, 1189
ApeKI GCWGC 2 cut(s) 220, 1016
Asp700I GAANNNNTTC 1 cut(s) 438
AspLEI GCGC 1 cut(s) 1124
AspS9I GGNCC 4 cut(s) 644, 888, 1151, 1328
AsuHPI GGTGA 5 cut(s) 411, 473, 629, 685, 751
AvaII GGWCC 4 cut(s) 644, 888, 1151, 1328
BaeGI GKGCMC 1 cut(s) 841
BamHI GGATCC 1 cut(s) 744
BanI GGYRCC 1 cut(s) 1045
BbsI GAAGAC 3 cut(s) 571, 705, 1395
BbvI GCAGC 2 cut(s) 207, 1028
BccI CCATC 8 cut(s) 36, 155, 182, 452, 580, 750, 917, 1440
BceAI ACGGC 1 cut(s) 742
BcgI CGANNNNNNTGC 2 cut(s) 1195, 1229
BciT130I CCWGG 5 cut(s) 389, 423, 818, 932, 1050
BclI TGATCA 1 cut(s) 463
BcoDI GTCTC 1 cut(s) 515
BfaI CTAG 1 cut(s) 1061
BfmI CTRYAG 6 cut(s) 221, 506, 534, 668, 1155, 1222
BfoI RGCGCY 1 cut(s) 1125
BfrI CTTAAG 1 cut(s) 610
BfuAI ACCTGC 1 cut(s) 1162
BglII AGATCT 1 cut(s) 868
BisI GCNGC 2 cut(s) 221, 1017
BlsI GCNGC 2 cut(s) 222, 1018
Bme1390I CCNGG 5 cut(s) 389, 423, 818, 932, 1050
Bme18I GGWCC 4 cut(s) 644, 888, 1151, 1328
BmgBI CACGTC 1 cut(s) 1213
BmgT120I GGNCC 4 cut(s) 644, 888, 1151, 1328
BmiI GGNNCC 9 cut(s) 394, 657, 746, 805, 889, 890, 1047, 1152, 1330
BmrFI CCNGG 5 cut(s) 389, 423, 818, 932, 1050
BmrI ACTGGG 2 cut(s) 743, 1492
BmsI GCATC 4 cut(s) 497, 995, 1150, 1297
BmuI ACTGGG 2 cut(s) 743, 1492
BpiI GAAGAC 3 cut(s) 571, 705, 1395
BplI GAGNNNNNCTC 2 cut(s) 1160, 1192
Bpu10I CCTNAGC 3 cut(s) 73, 550, 786
BpuEI CTTGAG 1 cut(s) 645
BsaBI GATNNNNATC 2 cut(s) 462, 567
BsaHI GRCGYC 1 cut(s) 1053
BsaJI CCNNGG 2 cut(s) 388, 816
BsaXI ACNNNNNCTCC 2 cut(s) 1338, 1368
Bsc4I CCNNNNNNNGG 8 cut(s) 34, 245, 286, 297, 388, 797, 937, 1234
Bse118I RCCGGY 1 cut(s) 395
Bse1I ACTGG 3 cut(s) 683, 749, 1487
Bse8I GATNNNNATC 2 cut(s) 462, 567
BseBI CCWGG 5 cut(s) 389, 423, 818, 932, 1050
BseDI CCNNGG 2 cut(s) 388, 816
BseGI GGATG 7 cut(s) 147, 193, 488, 761, 1003, 1451, 1503
BseJI GATNNNNATC 2 cut(s) 462, 567
BseLI CCNNNNNNNGG 8 cut(s) 34, 245, 286, 297, 388, 797, 937, 1234
BseMII CTCAG 1 cut(s) 564
BseNI ACTGG 3 cut(s) 683, 749, 1487
BseRI GAGGAG 1 cut(s) 648
BseSI GKGCMC 1 cut(s) 841
BseXI GCAGC 2 cut(s) 207, 1028
Bsh1236I CGCG 1 cut(s) 1200
Bsh1285I CGRYCG 1 cut(s) 1198
BshFI GGCC 3 cut(s) 290, 399, 1191
BshNI GGYRCC 1 cut(s) 1045
BsiEI CGRYCG 1 cut(s) 1198
BsiSI CCGG 2 cut(s) 396, 1185
BslFI GGGAC 2 cut(s) 874, 1164
BslI CCNNNNNNNGG 8 cut(s) 34, 245, 286, 297, 388, 797, 937, 1234
BsmAI GTCTC 1 cut(s) 515
BsmFI GGGAC 2 cut(s) 874, 1164
BsmI GAATGC 3 cut(s) 165, 480, 739
BsnI GGCC 3 cut(s) 290, 399, 1191
Bsp1286I GDGCHC 1 cut(s) 841
BspACI CCGC 1 cut(s) 737
BspANI GGCC 3 cut(s) 290, 399, 1191
BspCNI CTCAG 1 cut(s) 563
BspFNI CGCG 1 cut(s) 1200
BspLI GGNNCC 9 cut(s) 394, 657, 746, 805, 889, 890, 1047, 1152, 1330
BspMAI CTGCAG 5 cut(s) 225, 510, 538, 672, 1159
BspMI ACCTGC 1 cut(s) 1162
BspPI GGATC 4 cut(s) 681, 739, 752, 767
BspT107I GGYRCC 1 cut(s) 1045
BspTI CTTAAG 1 cut(s) 610
BsrFI RCCGGY 1 cut(s) 395
BsrI ACTGG 3 cut(s) 683, 749, 1487
BssAI RCCGGY 1 cut(s) 395
BssECI CCNNGG 2 cut(s) 388, 816
BssNI GRCGYC 1 cut(s) 1053
Bst2UI CCWGG 5 cut(s) 389, 423, 818, 932, 1050
Bst4CI ACNGT 4 cut(s) 281, 686, 911, 964
BstACI GRCGYC 1 cut(s) 1053
BstAFI CTTAAG 1 cut(s) 610
BstC8I GCNNGC 3 cut(s) 510, 813, 1434
BstDEI CTNAG 5 cut(s) 73, 550, 786, 982, 1490
BstF5I GGATG 7 cut(s) 147, 193, 488, 761, 1003, 1451, 1503
BstFNI CGCG 1 cut(s) 1200
BstH2I RGCGCY 1 cut(s) 1125
BstHHI GCGC 1 cut(s) 1124
BstMAI GTCTC 1 cut(s) 515
BstMCI CGRYCG 1 cut(s) 1198
BstMWI GCNNNNNNNGC 4 cut(s) 1016, 1197, 1364, 1457
BstNI CCWGG 5 cut(s) 389, 423, 818, 932, 1050
BstNSI RCATGY 1 cut(s) 1243
BstSCI CCNGG 5 cut(s) 387, 421, 816, 930, 1048
BstSFI CTRYAG 6 cut(s) 221, 506, 534, 668, 1155, 1222
BstSLI GKGCMC 1 cut(s) 841
BstUI CGCG 1 cut(s) 1200
BstV1I GCAGC 2 cut(s) 207, 1028
BstV2I GAAGAC 3 cut(s) 571, 705, 1395
BstX2I RGATCY 3 cut(s) 744, 772, 868
BstXI CCANNNNNNTGG 1 cut(s) 756
BstYI RGATCY 3 cut(s) 744, 772, 868
BsuRI GGCC 3 cut(s) 290, 399, 1191
BtrI CACGTC 1 cut(s) 1213
BtsCI GGATG 7 cut(s) 147, 193, 488, 761, 1003, 1451, 1503
BtsI GCAGTG 1 cut(s) 262
BtsIMutI CAGTG 6 cut(s) 262, 676, 916, 960, 1261, 1480
BveI ACCTGC 1 cut(s) 1162
Cac8I GCNNGC 3 cut(s) 510, 813, 1434
CfoI GCGC 1 cut(s) 1124
Cfr10I RCCGGY 1 cut(s) 395
Cfr13I GGNCC 4 cut(s) 644, 888, 1151, 1328
CseI GACGC 2 cut(s) 1042, 1368
Csp6I GTAC 4 cut(s) 25, 43, 1103, 1231
CviAII CATG 4 cut(s) 54, 834, 875, 1240
CviQI GTAC 4 cut(s) 25, 43, 1103, 1231
DdeI CTNAG 5 cut(s) 73, 550, 786, 982, 1490
Eco147I AGGCCT 1 cut(s) 1191
Eco47I GGWCC 4 cut(s) 644, 888, 1151, 1328
Eco47III AGCGCT 1 cut(s) 1123
Eco57I CTGAAG 2 cut(s) 875, 1237
EcoO109I RGGNCCY 2 cut(s) 888, 1151
EcoRII CCWGG 5 cut(s) 387, 421, 816, 930, 1048
FaeI CATG 4 cut(s) 57, 837, 878, 1243
FaqI GGGAC 2 cut(s) 874, 1164
FatI CATG 4 cut(s) 53, 833, 874, 1239
FbaI TGATCA 1 cut(s) 463
Fnu4HI GCNGC 2 cut(s) 221, 1017
FokI GGATG 7 cut(s) 154, 200, 475, 768, 990, 1458, 1510
Fsp4HI GCNGC 2 cut(s) 221, 1017
FspBI CTAG 1 cut(s) 1061
GlaI GCGC 1 cut(s) 1123
GluI GCNGC 2 cut(s) 221, 1017
HaeII RGCGCY 1 cut(s) 1125
HaeIII GGCC 3 cut(s) 290, 399, 1191
HapII CCGG 2 cut(s) 396, 1185
HgaI GACGC 2 cut(s) 1042, 1368
HhaI GCGC 1 cut(s) 1124
Hin1I GRCGYC 1 cut(s) 1053
Hin1II CATG 4 cut(s) 57, 837, 878, 1243
Hin6I GCGC 1 cut(s) 1122
HinP1I GCGC 1 cut(s) 1122
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HinfI GANTC 5 cut(s) 109, 284, 329, 416, 944
HpaII CCGG 2 cut(s) 396, 1185
HphI GGTGA 5 cut(s) 411, 473, 629, 685, 751
Hpy166II GTNNAC 2 cut(s) 213, 277
Hpy188I TCNGA 5 cut(s) 415, 444, 520, 1237, 1300
Hpy188III TCNNGA 5 cut(s) 647, 990, 1061, 1304, 1504
Hpy8I GTNNAC 2 cut(s) 213, 277
HpyAV CCTTC 3 cut(s) 159, 850, 878
HpyCH4III ACNGT 4 cut(s) 281, 686, 911, 964
HpyCH4IV ACGT 1 cut(s) 1212
HpyF10VI GCNNNNNNNGC 4 cut(s) 1016, 1197, 1364, 1457
HpyF3I CTNAG 5 cut(s) 73, 550, 786, 982, 1490
HpySE526I ACGT 1 cut(s) 1212
Hsp92I GRCGYC 1 cut(s) 1053
Hsp92II CATG 4 cut(s) 57, 837, 878, 1243
HspAI GCGC 1 cut(s) 1122
KflI GGGWCCC 1 cut(s) 888
Ksp22I TGATCA 1 cut(s) 463
LmnI GCTCC 4 cut(s) 661, 809, 1168, 1376
Lsp1109I GCAGC 2 cut(s) 207, 1028
LweI GCATC 4 cut(s) 497, 995, 1150, 1297
MaeI CTAG 1 cut(s) 1061
MaeII ACGT 1 cut(s) 1212
MaeIII GTNAC 4 cut(s) 127, 599, 686, 1312
MboII GAAGA 6 cut(s) 23, 571, 572, 710, 863, 1400
MfeI CAATTG 1 cut(s) 527
MflI RGATCY 3 cut(s) 744, 772, 868
MhlI GDGCHC 1 cut(s) 841
MmeI TCCRAC 6 cut(s) 119, 733, 778, 800, 972, 1324
MroXI GAANNNNTTC 1 cut(s) 438
MseI TTAA 4 cut(s) 18, 596, 611, 1028
MspCI CTTAAG 1 cut(s) 610
MspI CCGG 2 cut(s) 396, 1185
MspR9I CCNGG 5 cut(s) 389, 423, 818, 932, 1050
MunI CAATTG 1 cut(s) 527
Mva1269I GAATGC 3 cut(s) 165, 480, 739
MvaI CCWGG 5 cut(s) 389, 423, 818, 932, 1050
MvnI CGCG 1 cut(s) 1200
MwoI GCNNNNNNNGC 4 cut(s) 1016, 1197, 1364, 1457
NlaIII CATG 4 cut(s) 57, 837, 878, 1243
NlaIV GGNNCC 9 cut(s) 394, 657, 746, 805, 889, 890, 1047, 1152, 1330
NmuCI GTSAC 2 cut(s) 599, 1312
NspI RCATGY 1 cut(s) 1243
PceI AGGCCT 1 cut(s) 1191
PciI ACATGT 1 cut(s) 1239
PctI GAATGC 3 cut(s) 165, 480, 739
PdmI GAANNNNTTC 1 cut(s) 438
PfeI GAWTC 5 cut(s) 109, 284, 329, 416, 944
PflMI CCANNNNNTGG 2 cut(s) 34, 245
PkrI GCNGC 2 cut(s) 222, 1018
Ple19I CGATCG 1 cut(s) 1198
PpuMI RGGWCCY 2 cut(s) 888, 1151
PscI ACATGT 1 cut(s) 1239
Psp5II RGGWCCY 2 cut(s) 888, 1151
Psp6I CCWGG 5 cut(s) 387, 421, 816, 930, 1048
PspGI CCWGG 5 cut(s) 387, 421, 816, 930, 1048
PspN4I GGNNCC 9 cut(s) 394, 657, 746, 805, 889, 890, 1047, 1152, 1330
PspPI GGNCC 4 cut(s) 644, 888, 1151, 1328
PspPPI RGGWCCY 2 cut(s) 888, 1151
PstI CTGCAG 5 cut(s) 225, 510, 538, 672, 1159
PsuI RGATCY 3 cut(s) 744, 772, 868
PvuI CGATCG 1 cut(s) 1198
RsaI GTAC 4 cut(s) 26, 44, 1104, 1232
RsaNI GTAC 4 cut(s) 25, 43, 1103, 1231
SaqAI TTAA 4 cut(s) 18, 596, 611, 1028
SatI GCNGC 2 cut(s) 221, 1017
Sau96I GGNCC 4 cut(s) 644, 888, 1151, 1328
SbfI CCTGCAGG 1 cut(s) 672
ScrFI CCNGG 5 cut(s) 389, 423, 818, 932, 1050
SdaI CCTGCAGG 1 cut(s) 672
SduI GDGCHC 1 cut(s) 841
SfaNI GCATC 4 cut(s) 497, 995, 1150, 1297
SfcI CTRYAG 6 cut(s) 221, 506, 534, 668, 1155, 1222
SinI GGWCC 4 cut(s) 644, 888, 1151, 1328
SmlI CTYRAG 2 cut(s) 610, 660
SmoI CTYRAG 2 cut(s) 610, 660
Sse8387I CCTGCAGG 1 cut(s) 672
SseBI AGGCCT 1 cut(s) 1191
SsiI CCGC 1 cut(s) 737
SspI AATATT 1 cut(s) 594
SspMI CTAG 1 cut(s) 1061
StuI AGGCCT 1 cut(s) 1191
StyD4I CCNGG 5 cut(s) 387, 421, 816, 930, 1048
TaaI ACNGT 4 cut(s) 281, 686, 911, 964
TaiI ACGT 1 cut(s) 1215
TaqI TCGA 4 cut(s) 722, 1194, 1305, 1503
TatI WGTACW 1 cut(s) 1230
TfiI GAWTC 5 cut(s) 109, 284, 329, 416, 944
Tru1I TTAA 4 cut(s) 18, 596, 611, 1028
Tru9I TTAA 4 cut(s) 18, 596, 611, 1028
TscAI CASTG 6 cut(s) 262, 683, 916, 967, 1261, 1487
TseFI GTSAC 2 cut(s) 599, 1312
TseI GCWGC 2 cut(s) 220, 1016
Tsp45I GTSAC 2 cut(s) 599, 1312
TspDTI ATGAA 7 cut(s) 158, 342, 571, 863, 1046, 1110, 1267
TspGWI ACGGA 1 cut(s) 1120
TspRI CASTG 6 cut(s) 262, 683, 916, 967, 1261, 1487
Van91I CCANNNNNTGG 2 cut(s) 34, 245
Vha464I CTTAAG 1 cut(s) 610
VpaK11BI GGWCC 4 cut(s) 644, 888, 1151, 1328
XbaI TCTAGA 1 cut(s) 1060
XceI RCATGY 1 cut(s) 1243
XcmI CCANNNNNNNNNTGG 2 cut(s) 632, 756
XmnI GAANNNNTTC 1 cut(s) 438
XspI CTAG 1 cut(s) 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.