Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002687

Physical Location & Seq

Genomic Coordinates Reverse (-)

18159603 .. 18161588

Gene Structure 1986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0194700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGTCTCTAATAAGGGTGGCAACTTTTCTTCTTCACTACTTCTTGAATAATTGCAGTATTATGCCCTTGATCATCTCCATCAATTTCCTCCTTATTCCCTTTTGCCATCCACTTTCCTTCAGTATCAATTACTTCGATAAAACTGCAAGTAAGATACTCTACGACGGTGATGCAGCTTCCGACGGTTCGGGATTCATTGAACTCAATACAGAAGATGTTTTTCGAGTTGGCTGGGCTAGATATGCAGAGCCGTTGCACTTGTGGGAGGGGTCGTCATTTGCTGCAGACTTCACTACTAACTTCTCCTTCGTTGTGGAAATTCGTAACAGTAGCTCATGTGGTGATGGGTTTGCCTTCTTCCTCGCTCCGGTCCACTATCAAATTACACCCAACTCCGCCGGTCCTTTTATGGGCTTGTTCAACTGGACCGCTGGTTCTGCAGCCTCCCTAATCCAGATTGTGACGGTCGAGTTCGACACTCTGGCCGGCATCGTCGAGGCTCCATCAACGGGGCCGCACATCGGGATCAACGACAGGAGCATCACGTCAGCTGTTACTGCCAGCTGGAATCCTTTCCTCCATAGTGGGCAATTGTGTCGTGTACGGATAACATACAATGCTACCACCAACAACCTCACCGTGTTTTGGACATACGAAGAAAAGTTCGAGGCAAATTCTTCCCTTTCCTATGCAATTGACCTGAAAATATCTCTCCCGGAGTGGGTTACAGTTGGATTTGCATCTTCTACAAACCTTGGCTCTGAGCGGCATGCTATAAGATCATGGGAATTCAGAAGTTCAGAATTAAAGTCCGATGCGACCCGGAGGAGGATAGTCTTGACAATTGGGGTCGCTGCAGCAGCAGTTCTTTTCTTTATTTCGATGCTTTATGTCGCCTACCGGTGGGTCGTACGGAAGCGGATAAAGAGGACTCGTGGAGAAGGAAATGAGTCGAATGACACCTCCAGTGTTCCATTGTCCTCCATAAATTCAGATATTCAGATACTAGCCTTGCCAAGACAATTTACTTATCAAGAACTAGTTGCAGCCACCAATGGCTTTGCAAACGACAGAAGGCTAGGCCAAGGAGGATCGGGACAAGTTTATAAAGGGATCATACAAGATCTAGGCTGTGCAGTTGCTGTGAAGAGAATCTTTGCACAATCTGACAAGCACTATGAGAAAACCTTCATCAACGAAGTCAAGATAATAAGTCGCATAATACATAAAAACTTGGTGCAGTTTATTGGATGGTGTCATGAGCAAGGAGAATGCTTACTTGTTTATGCATACATGCCTAACTGTAGCCTTGACACGCATCTATTTGGCCCTAGAGCAACTTTGCAATGGGAATTTAGGTATAGGATAGCTCTAGGCTTGGCCTCGGCGCTTCATTATCTACACGAGGATGCAGAGCAGTGTGTCCTTCATAGGGATATCAAATCAGCTAACATTTTATTGGACAACGATTTTAGCACTAAACTTGGTGATTTTGGGATTGCTAAGCTTGTGGATCCGCGGTTAAGGTATCAGACTGAAGGGGTAGTCGGGACTTTTGGATACATGGCTCCAGAATATGTTATTGAAGGGAGGGCAAGCAAAGAATCAGACATGTTTAGCTTCGGAGTTGTGGCCTTGGAAATTGCTTGTGGAAGGAGGACCTACCACGATGGAGAATTCCACTCACCGCTTTATACGTGGGTTTGGCATTTATACCTTGCAGGAAATTTATTGGATGCAGCTGATGAGAGATTGGATATGGATTTTGATAAAAATGAAATGGAGTGCTTGTTAATTGTTGGATTATGGTGCACTCATCCAAACAACAAAGAAAGGCCAAAAGTAGGACAAGTGATTAGGAATCTCCAGCGTGAAGCACCATTGCCAAATCTTCCACATATCATGCCTGATTACCAAATGCCTCAACCTCTGCAACAAGCTCAATCTGGTTCCTCTCAGACCCAACTTCCAGCTTCAGCACTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulase

Protein Analysis

661

Amino Acids

74.12

Weight (kDa)

6.03

Isoelectric Point (pI)

45.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	38 - 274	4.5e-56	Legume lectin domain
Pkinase	PF00069	355 - 560	1.6e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	357 - 619	9.9e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002687)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g21360 FvH4_1g21360 FvH4_1g21420 FvH4_5g37950
malus_domestica	MD01G1025400.v1.1 MD08G1178600.v1.1
prunus_persica	Prupe.1G512300_v2.0.a1 Prupe.6G181100_v2.0.a1
pyrus_communis	pycom01g05350 pycom08g15290 pycom08g15300
rosa_chinensis	RchiOBHm_Chr2g0115211 RchiOBHm_Chr7g0239891
rosa_laevigata	RLG00000000720 RLG00000018166
rosa_multiflora	Rmu_co8458197.1_g000001 Rmu_sc0000540.1_g000053 Rmu_sc0002784.1_g000034 Rmu_sc0005738.1_g000014 Rmu_sc0032904.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130710 Rroxscaffold_2G00130730 Rroxscaffold_3G00220700
rosa_rugosa	Rorug02G0194700 Rorug02G0194800 Rorug02G0194800 Rorug02G0194900 Rorug07G0331000
rosa_samantha	Rh2AG252900 Rh2AG253000 Rh2BG262600 Rh2CG257600 Rh2DG261100 Rh2DG261200 Rh7AG484400 Rh7BG457600 Rh7CG501900 Rh7DG470100
rosa_wichuraiana	Rw2G019750 Rw7G040640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1107
AccBSI	CCGCTC	1 cut(s)	766
AccII	CGCG	1 cut(s)	1519
AciI	CCGC	8 cut(s)	396, 429, 515, 766, 919, 1517, 1519, 1688
AclWI	GGATC	5 cut(s)	533, 1099, 1121, 1508, 1521
AcoI	YGGCCR	1 cut(s)	483
AcsI	RAATTY	7 cut(s)	318, 673, 788, 988, 1352, 1676, 1726
AcuI	CTGAAG	3 cut(s)	103, 1557, 1959
AfaI	GTAC	2 cut(s)	603, 912
AflIII	ACRYGT	1 cut(s)	1611
AgeI	ACCGGT	1 cut(s)	900
AgsI	TTSAA	4 cut(s)	46, 200, 421, 1586
AhlI	ACTAGT	1 cut(s)	1039
AjiI	CACGTC	1 cut(s)	546
AloI	GAACNNNNNNTCC	2 cut(s)	418, 450
Alw21I	GWGCWC	1 cut(s)	1814
Alw26I	GTCTC	1 cut(s)	9
Alw44I	GTGCAC	1 cut(s)	1810
AlwI	GGATC	5 cut(s)	533, 1099, 1121, 1508, 1521
AlwNI	CAGNNNCTG	1 cut(s)	1142
AoxI	GGCC	7 cut(s)	483, 512, 1081, 1327, 1380, 1632, 1835
ApaLI	GTGCAC	1 cut(s)	1810
ApeKI	GCWGC	8 cut(s)	173, 281, 440, 854, 857, 860, 1046, 1739
ApoI	RAATTY	7 cut(s)	318, 673, 788, 988, 1352, 1676, 1726
AsiGI	ACCGGT	1 cut(s)	900
Asp700I	GAANNNNTTC	2 cut(s)	572, 1187
AspLEI	GCGC	1 cut(s)	1390
AspS9I	GGNCC	6 cut(s)	370, 401, 426, 512, 1328, 1659
AsuC2I	CCSGG	2 cut(s)	716, 823
AsuHPI	GGTGA	5 cut(s)	179, 353, 628, 1499, 1677
AvaII	GGWCC	4 cut(s)	370, 401, 426, 1659
BaeGI	GKGCMC	1 cut(s)	1814
BamHI	GGATCC	1 cut(s)	1513
BauI	CACGAG	2 cut(s)	933, 1403
Bbv12I	GWGCWC	1 cut(s)	1814
BbvI	GCAGC	8 cut(s)	185, 268, 452, 841, 869, 872, 1058, 1751
BccI	CCATC	6 cut(s)	86, 114, 338, 511, 1245, 1664
BceAI	ACGGC	1 cut(s)	235
BcgI	CGANNNNNNTGC	6 cut(s)	125, 152, 159, 186, 578, 612
BciVI	GTATCC	1 cut(s)	1553
BclI	TGATCA	1 cut(s)	69
BcnI	CCSGG	2 cut(s)	716, 823
BcoDI	GTCTC	1 cut(s)	9
BcuI	ACTAGT	1 cut(s)	1039
BfaI	CTAG	7 cut(s)	237, 1007, 1040, 1079, 1127, 1332, 1373
BfmI	CTRYAG	5 cut(s)	282, 438, 855, 1303, 1982
BfoI	RGCGCY	1 cut(s)	1391
BfuI	GTATCC	1 cut(s)	1553
BglII	AGATCT	1 cut(s)	1123
BlpI	GCTNAGC	1 cut(s)	1503
Bme1390I	CCNGG	2 cut(s)	716, 823
Bme18I	GGWCC	4 cut(s)	370, 401, 426, 1659
BmgBI	CACGTC	1 cut(s)	546
BmgT120I	GGNCC	6 cut(s)	370, 401, 426, 512, 1328, 1659
BmiI	GGNNCC	5 cut(s)	501, 513, 1515, 1569, 1951
BmrFI	CCNGG	2 cut(s)	716, 823
BmsI	GCATC	9 cut(s)	160, 498, 549, 749, 805, 873, 1327, 1399, 1726
BpmI	CTGGAG	3 cut(s)	949, 1554, 1850
Bpu1102I	GCTNAGC	1 cut(s)	1503
BpuMI	CCSGG	2 cut(s)	716, 823
BsaAI	YACGTR	1 cut(s)	1698
BsaBI	GATNNNNATC	1 cut(s)	739
BsaJI	CCNNGG	5 cut(s)	754, 1084, 1383, 1517, 1635
BsaWI	WCCGGW	2 cut(s)	367, 900
BsaXI	ACNNNNNCTCC	4 cut(s)	257, 287, 1775, 1805
Bse118I	RCCGGY	3 cut(s)	398, 485, 900
Bse1I	ACTGG	2 cut(s)	428, 966
Bse3DI	GCAATG	2 cut(s)	1352, 1880
Bse8I	GATNNNNATC	1 cut(s)	739
BseDI	CCNNGG	5 cut(s)	754, 1084, 1383, 1517, 1635
BseGI	GGATG	5 cut(s)	106, 1256, 1414, 1741, 1816
BseJI	GATNNNNATC	1 cut(s)	739
BseMI	GCAATG	2 cut(s)	1352, 1880
BseMII	CTCAG	2 cut(s)	753, 1970
BseNI	ACTGG	2 cut(s)	428, 966
BseRI	GAGGAG	1 cut(s)	841
BseSI	GKGCMC	1 cut(s)	1814
BseXI	GCAGC	8 cut(s)	185, 268, 452, 841, 869, 872, 1058, 1751
BseYI	CCCAGC	1 cut(s)	231
BsgI	GTGCAG	2 cut(s)	1155, 1259
Bsh1236I	CGCG	1 cut(s)	1519
Bsh1285I	CGRYCG	1 cut(s)	468
BshFI	GGCC	7 cut(s)	485, 514, 1083, 1329, 1382, 1634, 1837
BshTI	ACCGGT	1 cut(s)	900
BsiEI	CGRYCG	1 cut(s)	468
BsiHKAI	GWGCWC	1 cut(s)	1814
BsiSI	CCGG	6 cut(s)	368, 399, 486, 716, 823, 901
BsiWI	CGTACG	1 cut(s)	910
BslFI	GGGAC	2 cut(s)	1110, 1564
BsmAI	GTCTC	1 cut(s)	9
BsmFI	GGGAC	2 cut(s)	1110, 1564
BsmI	GAATGC	1 cut(s)	1277
BsnI	GGCC	7 cut(s)	485, 514, 1083, 1329, 1382, 1634, 1837
Bsp1286I	GDGCHC	1 cut(s)	1814
Bsp143I	GATC	7 cut(s)	69, 525, 779, 1091, 1113, 1123, 1513
Bsp1720I	GCTNAGC	1 cut(s)	1503
BspACI	CCGC	8 cut(s)	396, 429, 515, 766, 919, 1517, 1519, 1688
BspANI	GGCC	7 cut(s)	485, 514, 1083, 1329, 1382, 1634, 1837
BspCNI	CTCAG	2 cut(s)	754, 1969
BspFNI	CGCG	1 cut(s)	1519
BspHI	TCATGA	1 cut(s)	1258
BspLI	GGNNCC	5 cut(s)	501, 513, 1515, 1569, 1951
BspMAI	CTGCAG	3 cut(s)	286, 442, 859
BspPI	GGATC	5 cut(s)	533, 1099, 1121, 1508, 1521
BsrBI	CCGCTC	1 cut(s)	766
BsrDI	GCAATG	2 cut(s)	1352, 1880
BsrFI	RCCGGY	3 cut(s)	398, 485, 900
BsrI	ACTGG	2 cut(s)	428, 966
BssAI	RCCGGY	3 cut(s)	398, 485, 900
BssECI	CCNNGG	5 cut(s)	754, 1084, 1383, 1517, 1635
BssMI	GATC	7 cut(s)	69, 525, 779, 1091, 1113, 1123, 1513
BssSI	CACGAG	2 cut(s)	933, 1403
BssT1I	CCWWGG	3 cut(s)	754, 1084, 1635
Bst2BI	CACGAG	2 cut(s)	933, 1403
Bst4CI	ACNGT	8 cut(s)	167, 185, 329, 466, 640, 730, 1304, 1983
Bst6I	CTCTTC	1 cut(s)	1142
BstBAI	YACGTR	1 cut(s)	1698
BstC8I	GCNNGC	4 cut(s)	487, 562, 771, 1597
BstDEI	CTNAG	3 cut(s)	762, 1503, 1956
BstDSI	CCRYGG	1 cut(s)	1517
BstF5I	GGATG	5 cut(s)	106, 1256, 1414, 1741, 1816
BstFNI	CGCG	1 cut(s)	1519
BstH2I	RGCGCY	1 cut(s)	1391
BstHHI	GCGC	1 cut(s)	1390
BstKTI	GATC	7 cut(s)	72, 528, 782, 1094, 1116, 1126, 1516
BstMAI	GTCTC	1 cut(s)	9
BstMBI	GATC	7 cut(s)	69, 525, 779, 1091, 1113, 1123, 1513
BstMCI	CGRYCG	1 cut(s)	468
BstMWI	GCNNNNNNNGC	4 cut(s)	242, 437, 557, 860
BstNSI	RCATGY	3 cut(s)	773, 1297, 1615
BstSCI	CCNGG	2 cut(s)	714, 821
BstSFI	CTRYAG	5 cut(s)	282, 438, 855, 1303, 1982
BstSLI	GKGCMC	1 cut(s)	1814
BstUI	CGCG	1 cut(s)	1519
BstV1I	GCAGC	8 cut(s)	185, 268, 452, 841, 869, 872, 1058, 1751
BstX2I	RGATCY	2 cut(s)	1123, 1513
BstYI	RGATCY	2 cut(s)	1123, 1513
BsuI	GTATCC	1 cut(s)	1553
BsuRI	GGCC	7 cut(s)	485, 514, 1083, 1329, 1382, 1634, 1837
BtgI	CCRYGG	1 cut(s)	1517
BtrI	CACGTC	1 cut(s)	546
BtsCI	GGATG	5 cut(s)	106, 1256, 1414, 1741, 1816
BtsI	GCAGTG	1 cut(s)	1424
BtsIMutI	CAGTG	3 cut(s)	973, 1424, 1979
Cac8I	GCNNGC	4 cut(s)	487, 562, 771, 1597
CaiI	CAGNNNCTG	1 cut(s)	1142
CciI	TCATGA	1 cut(s)	1258
CfoI	GCGC	1 cut(s)	1390
Cfr10I	RCCGGY	3 cut(s)	398, 485, 900
Cfr13I	GGNCC	6 cut(s)	370, 401, 426, 512, 1328, 1659
Cfr42I	CCGCGG	1 cut(s)	1520
Csp6I	GTAC	2 cut(s)	602, 911
CspAI	ACCGGT	1 cut(s)	900
CviAII	CATG	8 cut(s)	336, 770, 783, 1259, 1294, 1564, 1612, 1903
CviQI	GTAC	2 cut(s)	602, 911
DdeI	CTNAG	3 cut(s)	762, 1503, 1956
DpnI	GATC	7 cut(s)	71, 527, 781, 1093, 1115, 1125, 1515
DpnII	GATC	7 cut(s)	69, 525, 779, 1091, 1113, 1123, 1513
EaeI	YGGCCR	1 cut(s)	483
Eam1104I	CTCTTC	1 cut(s)	1142
EarI	CTCTTC	1 cut(s)	1142
EciI	GGCGGA	1 cut(s)	385
Eco130I	CCWWGG	3 cut(s)	754, 1084, 1635
Eco32I	GATATC	1 cut(s)	1438
Eco47I	GGWCC	4 cut(s)	370, 401, 426, 1659
Eco57I	CTGAAG	3 cut(s)	103, 1557, 1959
EcoO109I	RGGNCCY	1 cut(s)	1659
EcoRI	GAATTC	2 cut(s)	788, 1676
EcoRV	GATATC	1 cut(s)	1438
EcoT14I	CCWWGG	3 cut(s)	754, 1084, 1635
EcoT22I	ATGCAT	1 cut(s)	1291
ErhI	CCWWGG	3 cut(s)	754, 1084, 1635
FaeI	CATG	8 cut(s)	339, 773, 786, 1262, 1297, 1567, 1615, 1906
FalI	AAGNNNNNCTT	2 cut(s)	1139, 1171
FaqI	GGGAC	2 cut(s)	1110, 1564
FatI	CATG	8 cut(s)	335, 769, 782, 1258, 1293, 1563, 1611, 1902
FbaI	TGATCA	1 cut(s)	69
FokI	GGATG	5 cut(s)	93, 1263, 1421, 1748, 1803
FspBI	CTAG	7 cut(s)	237, 1007, 1040, 1079, 1127, 1332, 1373
GlaI	GCGC	1 cut(s)	1389
GsaI	CCCAGC	1 cut(s)	235
GsuI	CTGGAG	3 cut(s)	949, 1554, 1850
HaeII	RGCGCY	1 cut(s)	1391
HaeIII	GGCC	7 cut(s)	485, 514, 1083, 1329, 1382, 1634, 1837
HapII	CCGG	6 cut(s)	368, 399, 486, 716, 823, 901
HhaI	GCGC	1 cut(s)	1390
Hin1II	CATG	8 cut(s)	339, 773, 786, 1262, 1297, 1567, 1615, 1906
Hin6I	GCGC	1 cut(s)	1388
HinP1I	GCGC	1 cut(s)	1388
HindIII	AAGCTT	1 cut(s)	1505
HinfI	GANTC	7 cut(s)	192, 568, 931, 950, 1152, 1604, 1861
HpaII	CCGG	6 cut(s)	368, 399, 486, 716, 823, 901
HphI	GGTGA	5 cut(s)	179, 353, 628, 1499, 1677
Hpy166II	GTNNAC	3 cut(s)	373, 602, 1812
Hpy8I	GTNNAC	3 cut(s)	373, 602, 1812
Hpy99I	CGWCG	3 cut(s)	167, 185, 497
HpyCH4III	ACNGT	8 cut(s)	167, 185, 329, 466, 640, 730, 1304, 1983
HpyCH4IV	ACGT	2 cut(s)	545, 1697
HpyF10VI	GCNNNNNNNGC	4 cut(s)	242, 437, 557, 860
HpyF3I	CTNAG	3 cut(s)	762, 1503, 1956
HpySE526I	ACGT	2 cut(s)	545, 1697
Hsp92II	CATG	8 cut(s)	339, 773, 786, 1262, 1297, 1567, 1615, 1906
HspAI	GCGC	1 cut(s)	1388
KroI	GCCGGC	1 cut(s)	485
KroNI	GCCGGC	1 cut(s)	487
Ksp22I	TGATCA	1 cut(s)	69
KspI	CCGCGG	1 cut(s)	1520
Kzo9I	GATC	7 cut(s)	69, 525, 779, 1091, 1113, 1123, 1513
LmnI	GCTCC	4 cut(s)	370, 505, 537, 1573
Lsp1109I	GCAGC	8 cut(s)	185, 268, 452, 841, 869, 872, 1058, 1751
LweI	GCATC	9 cut(s)	160, 498, 549, 749, 805, 873, 1327, 1399, 1726
MaeI	CTAG	7 cut(s)	237, 1007, 1040, 1079, 1127, 1332, 1373
MaeII	ACGT	2 cut(s)	545, 1697
MaeIII	GTNAC	4 cut(s)	323, 460, 553, 724
MalI	GATC	7 cut(s)	71, 527, 781, 1093, 1115, 1125, 1515
MbiI	CCGCTC	1 cut(s)	766
MboI	GATC	7 cut(s)	69, 525, 779, 1091, 1113, 1123, 1513
MboII	GAAGA	9 cut(s)	20, 23, 224, 349, 668, 669, 735, 1159, 1883
MfeI	CAATTG	3 cut(s)	590, 693, 843
MflI	RGATCY	2 cut(s)	1123, 1513
MhlI	GDGCHC	1 cut(s)	1814
MlyI	GAGTC	2 cut(s)	925, 959
MmeI	TCCRAC	3 cut(s)	204, 712, 1780
Mph1103I	ATGCAT	1 cut(s)	1291
MroNI	GCCGGC	1 cut(s)	485
MroXI	GAANNNNTTC	2 cut(s)	572, 1187
MseI	TTAA	3 cut(s)	806, 1523, 1793
MslI	CAYNNNNRTG	1 cut(s)	1407
MspA1I	CMGCKG	5 cut(s)	431, 551, 564, 1519, 1742
MspI	CCGG	6 cut(s)	368, 399, 486, 716, 823, 901
MspR9I	CCNGG	2 cut(s)	716, 823
MunI	CAATTG	3 cut(s)	590, 693, 843
Mva1269I	GAATGC	1 cut(s)	1277
MvnI	CGCG	1 cut(s)	1519
MwoI	GCNNNNNNNGC	4 cut(s)	242, 437, 557, 860
NaeI	GCCGGC	1 cut(s)	487
NciI	CCSGG	2 cut(s)	716, 823
NdeII	GATC	7 cut(s)	69, 525, 779, 1091, 1113, 1123, 1513
NgoMIV	GCCGGC	1 cut(s)	485
NlaIII	CATG	8 cut(s)	339, 773, 786, 1262, 1297, 1567, 1615, 1906
NlaIV	GGNNCC	5 cut(s)	501, 513, 1515, 1569, 1951
NmeAIII	GCCGAG	1 cut(s)	1364
NmuCI	GTSAC	1 cut(s)	460
NsiI	ATGCAT	1 cut(s)	1291
NspI	RCATGY	3 cut(s)	773, 1297, 1615
PaeI	GCATGC	1 cut(s)	773
PagI	TCATGA	1 cut(s)	1258
PciI	ACATGT	1 cut(s)	1611
PcsI	WCGNNNNNNNCGW	1 cut(s)	528
PctI	GAATGC	1 cut(s)	1277
PdiI	GCCGGC	1 cut(s)	487
PdmI	GAANNNNTTC	2 cut(s)	572, 1187
PfeI	GAWTC	5 cut(s)	192, 568, 1152, 1604, 1861
Pfl23II	CGTACG	1 cut(s)	910
PfoI	TCCNGGA	1 cut(s)	714
PinAI	ACCGGT	1 cut(s)	900
PleI	GAGTC	2 cut(s)	925, 958
PpsI	GAGTC	2 cut(s)	925, 958
Ppu21I	YACGTR	1 cut(s)	1698
PpuMI	RGGWCCY	1 cut(s)	1659
PscI	ACATGT	1 cut(s)	1611
PsiI	TTATAA	1 cut(s)	1107
Psp5II	RGGWCCY	1 cut(s)	1659
PspFI	CCCAGC	1 cut(s)	231
PspLI	CGTACG	1 cut(s)	910
PspN4I	GGNNCC	5 cut(s)	501, 513, 1515, 1569, 1951
PspPI	GGNCC	6 cut(s)	370, 401, 426, 512, 1328, 1659
PspPPI	RGGWCCY	1 cut(s)	1659
PstI	CTGCAG	3 cut(s)	286, 442, 859
PstNI	CAGNNNCTG	1 cut(s)	1142
PsuI	RGATCY	2 cut(s)	1123, 1513
PvuII	CAGCTG	3 cut(s)	551, 564, 1742
RsaI	GTAC	2 cut(s)	603, 912
RsaNI	GTAC	2 cut(s)	602, 911
RseI	CAYNNNNRTG	1 cut(s)	1407
SacII	CCGCGG	1 cut(s)	1520
SaqAI	TTAA	3 cut(s)	806, 1523, 1793
Sau3AI	GATC	7 cut(s)	69, 525, 779, 1091, 1113, 1123, 1513
Sau96I	GGNCC	6 cut(s)	370, 401, 426, 512, 1328, 1659
SchI	GAGTC	2 cut(s)	925, 959
ScrFI	CCNGG	2 cut(s)	716, 823
SduI	GDGCHC	1 cut(s)	1814
SfaNI	GCATC	9 cut(s)	160, 498, 549, 749, 805, 873, 1327, 1399, 1726
SfcI	CTRYAG	5 cut(s)	282, 438, 855, 1303, 1982
Sfr303I	CCGCGG	1 cut(s)	1520
SgrBI	CCGCGG	1 cut(s)	1520
SinI	GGWCC	4 cut(s)	370, 401, 426, 1659
SmiMI	CAYNNNNRTG	1 cut(s)	1407
SpeI	ACTAGT	1 cut(s)	1039
SphI	GCATGC	1 cut(s)	773
SsiI	CCGC	8 cut(s)	396, 429, 515, 766, 919, 1517, 1519, 1688
SspMI	CTAG	7 cut(s)	237, 1007, 1040, 1079, 1127, 1332, 1373
StyD4I	CCNGG	2 cut(s)	714, 821
StyI	CCWWGG	3 cut(s)	754, 1084, 1635
TaaI	ACNGT	8 cut(s)	167, 185, 329, 466, 640, 730, 1304, 1983
TaiI	ACGT	2 cut(s)	548, 1700
TaqI	TCGA	8 cut(s)	135, 223, 468, 474, 495, 666, 881, 953
TauI	GCSGC	2 cut(s)	517, 769
TfiI	GAWTC	5 cut(s)	192, 568, 1152, 1604, 1861
Tru1I	TTAA	3 cut(s)	806, 1523, 1793
Tru9I	TTAA	3 cut(s)	806, 1523, 1793
TscAI	CASTG	3 cut(s)	973, 1424, 1986
TseFI	GTSAC	1 cut(s)	460
TseI	GCWGC	8 cut(s)	173, 281, 440, 854, 857, 860, 1046, 1739
Tsp45I	GTSAC	1 cut(s)	460
TspDTI	ATGAA	5 cut(s)	184, 1180, 1382, 1418, 1791
TspGWI	ACGGA	2 cut(s)	619, 928
TspRI	CASTG	3 cut(s)	973, 1424, 1986
VneI	GTGCAC	1 cut(s)	1810
VpaK11BI	GGWCC	4 cut(s)	370, 401, 426, 1659
XapI	RAATTY	7 cut(s)	318, 673, 788, 988, 1352, 1676, 1726
XceI	RCATGY	3 cut(s)	773, 1297, 1615
XmnI	GAANNNNTTC	2 cut(s)	572, 1187
XspI	CTAG	7 cut(s)	237, 1007, 1040, 1079, 1127, 1332, 1373
Zsp2I	ATGCAT	1 cut(s)	1291

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.