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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13470 |
| fragaria_vesca | FvH4_7g01990 FvH4_7g02000 FvH4_7g02110 |
| malus_domestica | MD02G1298000.v1.1 MD07G1026200.v1.1 |
| prunus_persica | Prupe.2G026400_v2.0.a1 Prupe.2G026400_v2.0.a1 Prupe.2G026400_v2.0.a1 Prupe.2G026400_v2.0.a1 |
| pyrus_communis | pycom02g25090 |
| rosa_chinensis | RchiOBHm_Chr1g0318991 |
| rosa_laevigata | RLG00000030489 RLG00000030510 RLG00000030511 |
| rosa_multiflora | Rmu_sc0003503.1_g000002 Rmu_sc0005870.1_g000006 Rmu_sc0006626.1_g000002 Rmu_sc0006626.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00328700 |
| rosa_rugosa | Rorug01G0026300 Rorug01G0027300 |
| rosa_samantha | Rh1AG038100 Rh1AG038200 Rh1AG039600 Rh1AG263000 Rh1BG034400 Rh1BG034500 Rh1BG036400 Rh1CG037100 Rh1DG032900 Rh1DG033000 |
| rosa_wichuraiana | Rw1G002940 Rw1G002950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 3 cut(s) | 1116, 1167, 1419 |
| AciI | CCGC | 4 cut(s) | 340, 426, 1247, 1400 |
| AclI | AACGTT | 1 cut(s) | 658 |
| AclWI | GGATC | 1 cut(s) | 89 |
| AcsI | RAATTY | 7 cut(s) | 217, 320, 689, 797, 908, 1474, 1791 |
| AcuI | CTGAAG | 2 cut(s) | 9, 1547 |
| AcyI | GRCGYC | 3 cut(s) | 1113, 1164, 1416 |
| AfaI | GTAC | 5 cut(s) | 84, 160, 519, 552, 892 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 445, 843, 844 |
| AgsI | TTSAA | 6 cut(s) | 183, 207, 217, 452, 674, 829 |
| AjnI | CCWGG | 1 cut(s) | 87 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 432, 464 |
| AluBI | AGCT | 8 cut(s) | 176, 278, 287, 421, 489, 823, 1525, 1759 |
| AluI | AGCT | 8 cut(s) | 176, 278, 287, 421, 489, 823, 1525, 1759 |
| Alw21I | GWGCWC | 3 cut(s) | 726, 1099, 1761 |
| AlwI | GGATC | 1 cut(s) | 89 |
| AoxI | GGCC | 1 cut(s) | 481 |
| ApeKI | GCWGC | 3 cut(s) | 148, 275, 278 |
| ApoI | RAATTY | 7 cut(s) | 217, 320, 689, 797, 908, 1474, 1791 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 507 |
| AspS9I | GGNCC | 3 cut(s) | 481, 955, 1315 |
| AsuHPI | GGTGA | 2 cut(s) | 1102, 1443 |
| AsuII | TTCGAA | 1 cut(s) | 764 |
| AvaII | GGWCC | 2 cut(s) | 955, 1315 |
| BanII | GRGCYC | 1 cut(s) | 1761 |
| BauI | CACGAG | 1 cut(s) | 267 |
| BbsI | GAAGAC | 2 cut(s) | 1535, 1713 |
| Bbv12I | GWGCWC | 3 cut(s) | 726, 1099, 1761 |
| BbvCI | CCTCAGC | 1 cut(s) | 417 |
| BbvI | GCAGC | 3 cut(s) | 160, 265, 287 |
| BccI | CCATC | 5 cut(s) | 519, 880, 1156, 1669, 1726 |
| BceAI | ACGGC | 1 cut(s) | 1761 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 529, 563 |
| BciT130I | CCWGG | 1 cut(s) | 89 |
| BfaI | CTAG | 1 cut(s) | 495 |
| BisI | GCNGC | 3 cut(s) | 149, 276, 279 |
| BlpI | GCTNAGC | 1 cut(s) | 422 |
| BlsI | GCNGC | 3 cut(s) | 150, 277, 280 |
| BmcAI | AGTACT | 1 cut(s) | 160 |
| Bme1390I | CCNGG | 1 cut(s) | 89 |
| Bme18I | GGWCC | 2 cut(s) | 955, 1315 |
| BmgT120I | GGNCC | 3 cut(s) | 481, 955, 1315 |
| BmiI | GGNNCC | 3 cut(s) | 411, 482, 1316 |
| BmrFI | CCNGG | 1 cut(s) | 89 |
| BmsI | GCATC | 5 cut(s) | 29, 190, 305, 823, 1644 |
| BpiI | GAAGAC | 2 cut(s) | 1535, 1713 |
| Bpu10I | CCTNAGC | 3 cut(s) | 417, 485, 1658 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 422 |
| Bpu14I | TTCGAA | 1 cut(s) | 764 |
| BpuEI | CTTGAG | 2 cut(s) | 693, 1691 |
| Bsa29I | ATCGAT | 1 cut(s) | 1151 |
| BsaHI | GRCGYC | 3 cut(s) | 1113, 1164, 1416 |
| BsaI | GGTCTC | 7 cut(s) | 985, 1036, 1138, 1189, 1339, 1390, 1492 |
| BsaJI | CCNNGG | 1 cut(s) | 87 |
| BsaWI | WCCGGW | 2 cut(s) | 223, 445 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1487, 1517 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 445, 843, 844 |
| Bse1I | ACTGG | 3 cut(s) | 1250, 1349, 1403 |
| Bse3DI | GCAATG | 1 cut(s) | 811 |
| BseBI | CCWGG | 1 cut(s) | 89 |
| BseCI | ATCGAT | 1 cut(s) | 1151 |
| BseDI | CCNNGG | 1 cut(s) | 87 |
| BseGI | GGATG | 8 cut(s) | 97, 233, 530, 838, 856, 1062, 1267, 1365 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 445, 843, 844 |
| BseMI | GCAATG | 1 cut(s) | 811 |
| BseMII | CTCAG | 5 cut(s) | 431, 476, 1310, 1434, 1509 |
| BseNI | ACTGG | 3 cut(s) | 1250, 1349, 1403 |
| BseRI | GAGGAG | 3 cut(s) | 59, 653, 1730 |
| BseXI | GCAGC | 3 cut(s) | 160, 265, 287 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1702 |
| BshFI | GGCC | 1 cut(s) | 483 |
| BshVI | ATCGAT | 1 cut(s) | 1151 |
| BsiEI | CGRYCG | 1 cut(s) | 1702 |
| BsiHKAI | GWGCWC | 3 cut(s) | 726, 1099, 1761 |
| BsiSI | CCGG | 2 cut(s) | 224, 446 |
| BslFI | GGGAC | 3 cut(s) | 1100, 1151, 1250 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 445, 843, 844 |
| BsmBI | CGTCTC | 1 cut(s) | 1423 |
| BsmFI | GGGAC | 3 cut(s) | 1100, 1151, 1250 |
| BsmI | GAATGC | 1 cut(s) | 1752 |
| BsnI | GGCC | 1 cut(s) | 483 |
| Bso31I | GGTCTC | 7 cut(s) | 985, 1036, 1138, 1189, 1339, 1390, 1492 |
| Bsp119I | TTCGAA | 1 cut(s) | 764 |
| Bsp1286I | GDGCHC | 3 cut(s) | 726, 1099, 1761 |
| Bsp1407I | TGTACA | 1 cut(s) | 517 |
| Bsp143I | GATC | 4 cut(s) | 94, 631, 1537, 1576 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 422 |
| BspACI | CCGC | 4 cut(s) | 340, 426, 1247, 1400 |
| BspANI | GGCC | 1 cut(s) | 483 |
| BspCNI | CTCAG | 5 cut(s) | 430, 477, 1311, 1433, 1510 |
| BspDI | ATCGAT | 1 cut(s) | 1151 |
| BspHI | TCATGA | 1 cut(s) | 1753 |
| BspLI | GGNNCC | 3 cut(s) | 411, 482, 1316 |
| BspPI | GGATC | 1 cut(s) | 89 |
| BspT104I | TTCGAA | 1 cut(s) | 764 |
| BspTNI | GGTCTC | 7 cut(s) | 985, 1036, 1138, 1189, 1339, 1390, 1492 |
| BsrDI | GCAATG | 1 cut(s) | 811 |
| BsrGI | TGTACA | 1 cut(s) | 517 |
| BsrI | ACTGG | 3 cut(s) | 1250, 1349, 1403 |
| BssECI | CCNNGG | 1 cut(s) | 87 |
| BssMI | GATC | 4 cut(s) | 94, 631, 1537, 1576 |
| BssNI | GRCGYC | 3 cut(s) | 1113, 1164, 1416 |
| BssSI | CACGAG | 1 cut(s) | 267 |
| Bst2BI | CACGAG | 1 cut(s) | 267 |
| Bst2UI | CCWGG | 1 cut(s) | 89 |
| Bst4CI | ACNGT | 3 cut(s) | 1090, 1503, 1703 |
| Bst6I | CTCTTC | 1 cut(s) | 268 |
| BstACI | GRCGYC | 3 cut(s) | 1113, 1164, 1416 |
| BstAUI | TGTACA | 1 cut(s) | 517 |
| BstBI | TTCGAA | 1 cut(s) | 764 |
| BstC8I | GCNNGC | 2 cut(s) | 75, 531 |
| BstDEI | CTNAG | 7 cut(s) | 417, 422, 485, 1319, 1420, 1518, 1658 |
| BstF5I | GGATG | 8 cut(s) | 97, 233, 530, 838, 856, 1062, 1267, 1365 |
| BstKTI | GATC | 4 cut(s) | 97, 634, 1540, 1579 |
| BstMBI | GATC | 4 cut(s) | 94, 631, 1537, 1576 |
| BstMCI | CGRYCG | 1 cut(s) | 1702 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 284, 293, 1756 |
| BstNI | CCWGG | 1 cut(s) | 89 |
| BstSCI | CCNGG | 1 cut(s) | 87 |
| BstV1I | GCAGC | 3 cut(s) | 160, 265, 287 |
| BstV2I | GAAGAC | 2 cut(s) | 1535, 1713 |
| Bsu15I | ATCGAT | 1 cut(s) | 1151 |
| BsuRI | GGCC | 1 cut(s) | 483 |
| BsuTUI | ATCGAT | 1 cut(s) | 1151 |
| BtsCI | GGATG | 8 cut(s) | 97, 233, 530, 838, 856, 1062, 1267, 1365 |
| BtsIMutI | CAGTG | 2 cut(s) | 1199, 1356 |
| Cac8I | GCNNGC | 2 cut(s) | 75, 531 |
| CciI | TCATGA | 1 cut(s) | 1753 |
| Cfr13I | GGNCC | 3 cut(s) | 481, 955, 1315 |
| ClaI | ATCGAT | 1 cut(s) | 1151 |
| Csp6I | GTAC | 5 cut(s) | 83, 159, 518, 551, 891 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 828, 863 |
| CviAII | CATG | 7 cut(s) | 541, 736, 985, 1441, 1492, 1591, 1754 |
| CviQI | GTAC | 5 cut(s) | 83, 159, 518, 551, 891 |
| DdeI | CTNAG | 7 cut(s) | 417, 422, 485, 1319, 1420, 1518, 1658 |
| DpnI | GATC | 4 cut(s) | 96, 633, 1539, 1578 |
| DpnII | GATC | 4 cut(s) | 94, 631, 1537, 1576 |
| Eam1104I | CTCTTC | 1 cut(s) | 268 |
| EarI | CTCTTC | 1 cut(s) | 268 |
| Ecl136II | GAGCTC | 1 cut(s) | 1759 |
| Eco24I | GRGCYC | 1 cut(s) | 1761 |
| Eco31I | GGTCTC | 7 cut(s) | 985, 1036, 1138, 1189, 1339, 1390, 1492 |
| Eco47I | GGWCC | 2 cut(s) | 955, 1315 |
| Eco53kI | GAGCTC | 1 cut(s) | 1759 |
| Eco57I | CTGAAG | 2 cut(s) | 9, 1547 |
| EcoICRI | GAGCTC | 1 cut(s) | 1759 |
| EcoO109I | RGGNCCY | 2 cut(s) | 481, 1315 |
| EcoRI | GAATTC | 2 cut(s) | 217, 908 |
| EcoRII | CCWGG | 1 cut(s) | 87 |
| EcoT22I | ATGCAT | 1 cut(s) | 22 |
| EcoT38I | GRGCYC | 1 cut(s) | 1761 |
| Esp3I | CGTCTC | 1 cut(s) | 1423 |
| FaeI | CATG | 7 cut(s) | 544, 739, 988, 1444, 1495, 1594, 1757 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 513, 545, 1674, 1706 |
| FaqI | GGGAC | 3 cut(s) | 1100, 1151, 1250 |
| FatI | CATG | 7 cut(s) | 540, 735, 984, 1440, 1491, 1590, 1753 |
| FauI | CCCGC | 1 cut(s) | 347 |
| Fnu4HI | GCNGC | 3 cut(s) | 149, 276, 279 |
| FokI | GGATG | 8 cut(s) | 104, 220, 537, 845, 863, 1049, 1274, 1352 |
| FriOI | GRGCYC | 1 cut(s) | 1761 |
| Fsp4HI | GCNGC | 3 cut(s) | 149, 276, 279 |
| FspBI | CTAG | 1 cut(s) | 495 |
| GluI | GCNGC | 3 cut(s) | 149, 276, 279 |
| HaeIII | GGCC | 1 cut(s) | 483 |
| HapII | CCGG | 2 cut(s) | 224, 446 |
| Hin1I | GRCGYC | 3 cut(s) | 1113, 1164, 1416 |
| Hin1II | CATG | 7 cut(s) | 544, 739, 988, 1444, 1495, 1594, 1757 |
| HincII | GTYRAC | 2 cut(s) | 566, 666 |
| HindII | GTYRAC | 2 cut(s) | 566, 666 |
| HinfI | GANTC | 4 cut(s) | 109, 311, 974, 1695 |
| HpaII | CCGG | 2 cut(s) | 224, 446 |
| HphI | GGTGA | 2 cut(s) | 1102, 1443 |
| Hpy166II | GTNNAC | 4 cut(s) | 13, 553, 566, 666 |
| Hpy188I | TCNGA | 5 cut(s) | 28, 43, 108, 1423, 1480 |
| Hpy8I | GTNNAC | 4 cut(s) | 13, 553, 566, 666 |
| Hpy99I | CGWCG | 4 cut(s) | 35, 38, 1782, 1785 |
| HpyCH4III | ACNGT | 3 cut(s) | 1090, 1503, 1703 |
| HpyCH4IV | ACGT | 5 cut(s) | 36, 658, 1113, 1164, 1416 |
| HpyCH4V | TGCA | 9 cut(s) | 20, 275, 281, 296, 533, 626, 680, 859, 1559 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 284, 293, 1756 |
| HpyF3I | CTNAG | 7 cut(s) | 417, 422, 485, 1319, 1420, 1518, 1658 |
| HpySE526I | ACGT | 5 cut(s) | 36, 658, 1113, 1164, 1416 |
| Hsp92I | GRCGYC | 3 cut(s) | 1113, 1164, 1416 |
| Hsp92II | CATG | 7 cut(s) | 544, 739, 988, 1444, 1495, 1594, 1757 |
| Kzo9I | GATC | 4 cut(s) | 94, 631, 1537, 1576 |
| LmnI | GCTCC | 2 cut(s) | 181, 1764 |
| Lsp1109I | GCAGC | 3 cut(s) | 160, 265, 287 |
| LweI | GCATC | 5 cut(s) | 29, 190, 305, 823, 1644 |
| MaeI | CTAG | 1 cut(s) | 495 |
| MaeII | ACGT | 5 cut(s) | 36, 658, 1113, 1164, 1416 |
| MaeIII | GTNAC | 4 cut(s) | 359, 592, 703, 1012 |
| MalI | GATC | 4 cut(s) | 96, 633, 1539, 1578 |
| MboI | GATC | 4 cut(s) | 94, 631, 1537, 1576 |
| MboII | GAAGA | 6 cut(s) | 15, 255, 515, 1540, 1631, 1718 |
| MfeI | CAATTG | 2 cut(s) | 183, 393 |
| MhlI | GDGCHC | 3 cut(s) | 726, 1099, 1761 |
| MlyI | GAGTC | 3 cut(s) | 103, 320, 1689 |
| MmeI | TCCRAC | 2 cut(s) | 131, 1786 |
| Mph1103I | ATGCAT | 1 cut(s) | 22 |
| MroXI | GAANNNNTTC | 1 cut(s) | 507 |
| MseI | TTAA | 3 cut(s) | 1457, 1505, 1614 |
| MslI | CAYNNNNRTG | 1 cut(s) | 729 |
| MspA1I | CMGCKG | 1 cut(s) | 278 |
| MspI | CCGG | 2 cut(s) | 224, 446 |
| MspR9I | CCNGG | 1 cut(s) | 89 |
| MunI | CAATTG | 2 cut(s) | 183, 393 |
| Mva1269I | GAATGC | 1 cut(s) | 1752 |
| MvaI | CCWGG | 1 cut(s) | 89 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 284, 293, 1756 |
| NdeII | GATC | 4 cut(s) | 94, 631, 1537, 1576 |
| NlaIII | CATG | 7 cut(s) | 544, 739, 988, 1444, 1495, 1594, 1757 |
| NlaIV | GGNNCC | 3 cut(s) | 411, 482, 1316 |
| NmuCI | GTSAC | 2 cut(s) | 592, 1012 |
| NsiI | ATGCAT | 1 cut(s) | 22 |
| NspV | TTCGAA | 1 cut(s) | 764 |
| PagI | TCATGA | 1 cut(s) | 1753 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1699, 1780 |
| PctI | GAATGC | 1 cut(s) | 1752 |
| PdmI | GAANNNNTTC | 1 cut(s) | 507 |
| PfeI | GAWTC | 1 cut(s) | 974 |
| PflFI | GACNNNGTC | 1 cut(s) | 959 |
| PkrI | GCNGC | 3 cut(s) | 150, 277, 280 |
| PleI | GAGTC | 3 cut(s) | 103, 319, 1689 |
| PpsI | GAGTC | 3 cut(s) | 103, 319, 1689 |
| PpuMI | RGGWCCY | 1 cut(s) | 1315 |
| Psp124BI | GAGCTC | 1 cut(s) | 1761 |
| Psp1406I | AACGTT | 1 cut(s) | 658 |
| Psp5II | RGGWCCY | 1 cut(s) | 1315 |
| Psp6I | CCWGG | 1 cut(s) | 87 |
| PspGI | CCWGG | 1 cut(s) | 87 |
| PspN4I | GGNNCC | 3 cut(s) | 411, 482, 1316 |
| PspPI | GGNCC | 3 cut(s) | 481, 955, 1315 |
| PspPPI | RGGWCCY | 1 cut(s) | 1315 |
| PsyI | GACNNNGTC | 1 cut(s) | 959 |
| PvuII | CAGCTG | 1 cut(s) | 278 |
| RsaI | GTAC | 5 cut(s) | 84, 160, 519, 552, 892 |
| RsaNI | GTAC | 5 cut(s) | 83, 159, 518, 551, 891 |
| RseI | CAYNNNNRTG | 1 cut(s) | 729 |
| SacI | GAGCTC | 1 cut(s) | 1761 |
| SaqAI | TTAA | 3 cut(s) | 1457, 1505, 1614 |
| SatI | GCNGC | 3 cut(s) | 149, 276, 279 |
| Sau3AI | GATC | 4 cut(s) | 94, 631, 1537, 1576 |
| Sau96I | GGNCC | 3 cut(s) | 481, 955, 1315 |
| ScaI | AGTACT | 1 cut(s) | 160 |
| SchI | GAGTC | 3 cut(s) | 103, 320, 1689 |
| ScrFI | CCNGG | 1 cut(s) | 89 |
| SduI | GDGCHC | 3 cut(s) | 726, 1099, 1761 |
| SfaNI | GCATC | 5 cut(s) | 29, 190, 305, 823, 1644 |
| SfuI | TTCGAA | 1 cut(s) | 764 |
| SinI | GGWCC | 2 cut(s) | 955, 1315 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 729 |
| SmlI | CTYRAG | 2 cut(s) | 708, 1670 |
| SmoI | CTYRAG | 2 cut(s) | 708, 1670 |
| SsiI | CCGC | 4 cut(s) | 340, 426, 1247, 1400 |
| SspI | AATATT | 2 cut(s) | 602, 1769 |
| SspMI | CTAG | 1 cut(s) | 495 |
| SstI | GAGCTC | 1 cut(s) | 1761 |
| StyD4I | CCNGG | 1 cut(s) | 87 |
| TaaI | ACNGT | 3 cut(s) | 1090, 1503, 1703 |
| TaiI | ACGT | 5 cut(s) | 39, 661, 1116, 1167, 1419 |
| TaqI | TCGA | 7 cut(s) | 634, 764, 1151, 1301, 1693, 1698, 1783 |
| TatI | WGTACW | 2 cut(s) | 158, 517 |
| TfiI | GAWTC | 1 cut(s) | 974 |
| Tru1I | TTAA | 3 cut(s) | 1457, 1505, 1614 |
| Tru9I | TTAA | 3 cut(s) | 1457, 1505, 1614 |
| TscAI | CASTG | 2 cut(s) | 1206, 1356 |
| TseFI | GTSAC | 2 cut(s) | 592, 1012 |
| TseI | GCWGC | 3 cut(s) | 148, 275, 278 |
| Tsp45I | GTSAC | 2 cut(s) | 592, 1012 |
| TspDTI | ATGAA | 8 cut(s) | 126, 159, 333, 557, 752, 791, 1526, 1632 |
| TspGWI | ACGGA | 1 cut(s) | 118 |
| TspRI | CASTG | 2 cut(s) | 1206, 1356 |
| Tth111I | GACNNNGTC | 1 cut(s) | 959 |
| VpaK11BI | GGWCC | 2 cut(s) | 955, 1315 |
| XapI | RAATTY | 7 cut(s) | 217, 320, 689, 797, 908, 1474, 1791 |
| XbaI | TCTAGA | 1 cut(s) | 494 |
| XmnI | GAANNNNTTC | 1 cut(s) | 507 |
| XspI | CTAG | 1 cut(s) | 495 |
| ZraI | GACGTC | 3 cut(s) | 1114, 1165, 1417 |
| ZrmI | AGTACT | 1 cut(s) | 160 |
| Zsp2I | ATGCAT | 1 cut(s) | 22 |