No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13470 |
| fragaria_vesca | FvH4_7g01990 FvH4_7g02000 FvH4_7g02110 |
| malus_domestica | MD02G1298000.v1.1 MD07G1026200.v1.1 |
| prunus_persica | Prupe.2G026400_v2.0.a1 Prupe.2G026400_v2.0.a1 Prupe.2G026400_v2.0.a1 Prupe.2G026400_v2.0.a1 |
| pyrus_communis | pycom02g25090 |
| rosa_chinensis | RchiOBHm_Chr1g0318991 |
| rosa_laevigata | RLG00000030489 RLG00000030510 RLG00000030511 |
| rosa_multiflora | Rmu_sc0003503.1_g000002 Rmu_sc0005870.1_g000006 Rmu_sc0006626.1_g000002 Rmu_sc0006626.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00328700 |
| rosa_rugosa | Rorug01G0026300 Rorug01G0027300 |
| rosa_samantha | Rh1AG038100 Rh1AG038200 Rh1AG039600 Rh1AG263000 Rh1BG034400 Rh1BG034500 Rh1BG036400 Rh1CG037100 Rh1DG032900 Rh1DG033000 |
| rosa_wichuraiana | Rw1G002940 Rw1G002950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 315 |
| AcuI | CTGAAG | 1 cut(s) | 174 |
| AdeI | CACNNNGTG | 1 cut(s) | 397 |
| AfaI | GTAC | 1 cut(s) | 169 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 374 |
| AjnI | CCWGG | 1 cut(s) | 373 |
| AluBI | AGCT | 4 cut(s) | 185, 287, 420, 462 |
| AluI | AGCT | 4 cut(s) | 185, 287, 420, 462 |
| ApeKI | GCWGC | 1 cut(s) | 157 |
| ApoI | RAATTY | 1 cut(s) | 315 |
| AsuHPI | GGTGA | 1 cut(s) | 479 |
| BbsI | GAAGAC | 1 cut(s) | 264 |
| BbvCI | CCTCAGC | 1 cut(s) | 416 |
| BbvI | GCAGC | 1 cut(s) | 169 |
| BciT130I | CCWGG | 1 cut(s) | 375 |
| BfaI | CTAG | 1 cut(s) | 353 |
| BisI | GCNGC | 1 cut(s) | 158 |
| BlsI | GCNGC | 1 cut(s) | 159 |
| BmcAI | AGTACT | 1 cut(s) | 169 |
| Bme1390I | CCNGG | 1 cut(s) | 375 |
| BmiI | GGNNCC | 1 cut(s) | 410 |
| BmrFI | CCNGG | 1 cut(s) | 375 |
| BmsI | GCATC | 3 cut(s) | 29, 199, 305 |
| BpiI | GAAGAC | 1 cut(s) | 264 |
| Bpu10I | CCTNAGC | 1 cut(s) | 416 |
| BsaJI | CCNNGG | 1 cut(s) | 93 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 106, 136 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 374 |
| Bse1I | ACTGG | 2 cut(s) | 12, 268 |
| BseBI | CCWGG | 1 cut(s) | 375 |
| BseDI | CCNNGG | 1 cut(s) | 93 |
| BseGI | GGATG | 3 cut(s) | 103, 118, 242 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 374 |
| BseMII | CTCAG | 3 cut(s) | 225, 245, 430 |
| BseNI | ACTGG | 2 cut(s) | 12, 268 |
| BseRI | GAGGAG | 3 cut(s) | 59, 62, 114 |
| BseXI | GCAGC | 1 cut(s) | 169 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 374 |
| Bsp19I | CCATGG | 1 cut(s) | 93 |
| BspCNI | CTCAG | 3 cut(s) | 226, 246, 429 |
| BspLI | GGNNCC | 1 cut(s) | 410 |
| BsrI | ACTGG | 2 cut(s) | 12, 268 |
| BssECI | CCNNGG | 1 cut(s) | 93 |
| BssT1I | CCWWGG | 1 cut(s) | 93 |
| Bst2UI | CCWGG | 1 cut(s) | 375 |
| Bst4CI | ACNGT | 1 cut(s) | 494 |
| BstC8I | GCNNGC | 1 cut(s) | 460 |
| BstDEI | CTNAG | 4 cut(s) | 234, 254, 416, 421 |
| BstDSI | CCRYGG | 1 cut(s) | 93 |
| BstF5I | GGATG | 3 cut(s) | 103, 118, 242 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 89, 293 |
| BstNI | CCWGG | 1 cut(s) | 375 |
| BstSCI | CCNGG | 1 cut(s) | 373 |
| BstV1I | GCAGC | 1 cut(s) | 169 |
| BstV2I | GAAGAC | 1 cut(s) | 264 |
| BtgI | CCRYGG | 1 cut(s) | 93 |
| BtsCI | GGATG | 3 cut(s) | 103, 118, 242 |
| BtsIMutI | CAGTG | 1 cut(s) | 5 |
| Cac8I | GCNNGC | 1 cut(s) | 460 |
| Csp6I | GTAC | 1 cut(s) | 168 |
| CviAII | CATG | 1 cut(s) | 94 |
| CviJI | RGCY | 7 cut(s) | 83, 92, 160, 185, 287, 420, 462 |
| CviKI_1 | RGCY | 7 cut(s) | 83, 92, 160, 185, 287, 420, 462 |
| CviQI | GTAC | 1 cut(s) | 168 |
| DdeI | CTNAG | 4 cut(s) | 234, 254, 416, 421 |
| DraIII | CACNNNGTG | 1 cut(s) | 397 |
| Eco130I | CCWWGG | 1 cut(s) | 93 |
| Eco32I | GATATC | 1 cut(s) | 503 |
| Eco57I | CTGAAG | 1 cut(s) | 174 |
| EcoRII | CCWGG | 1 cut(s) | 373 |
| EcoRV | GATATC | 1 cut(s) | 503 |
| EcoT14I | CCWWGG | 1 cut(s) | 93 |
| ErhI | CCWWGG | 1 cut(s) | 93 |
| FaeI | CATG | 1 cut(s) | 97 |
| FaiI | YATR | 5 cut(s) | 95, 151, 251, 403, 514 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 157, 189 |
| FatI | CATG | 1 cut(s) | 93 |
| Fnu4HI | GCNGC | 1 cut(s) | 158 |
| FokI | GGATG | 3 cut(s) | 105, 110, 229 |
| Fsp4HI | GCNGC | 1 cut(s) | 158 |
| FspBI | CTAG | 1 cut(s) | 353 |
| GluI | GCNGC | 1 cut(s) | 158 |
| Hin1II | CATG | 1 cut(s) | 97 |
| HinfI | GANTC | 2 cut(s) | 115, 310 |
| HphI | GGTGA | 1 cut(s) | 479 |
| Hpy166II | GTNNAC | 2 cut(s) | 13, 487 |
| Hpy188I | TCNGA | 4 cut(s) | 28, 43, 114, 235 |
| Hpy188III | TCNNGA | 3 cut(s) | 196, 206, 385 |
| Hpy8I | GTNNAC | 2 cut(s) | 13, 487 |
| Hpy99I | CGWCG | 3 cut(s) | 32, 35, 38 |
| HpyAV | CCTTC | 2 cut(s) | 198, 422 |
| HpyCH4III | ACNGT | 1 cut(s) | 494 |
| HpyCH4IV | ACGT | 1 cut(s) | 36 |
| HpyCH4V | TGCA | 1 cut(s) | 296 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 89, 293 |
| HpyF3I | CTNAG | 4 cut(s) | 234, 254, 416, 421 |
| HpySE526I | ACGT | 1 cut(s) | 36 |
| Hsp92II | CATG | 1 cut(s) | 97 |
| LmnI | GCTCC | 3 cut(s) | 190, 284, 431 |
| LpnPI | CCDG | 8 cut(s) | 93, 174, 219, 281, 360, 387, 391, 398 |
| Lsp1109I | GCAGC | 1 cut(s) | 169 |
| LweI | GCATC | 3 cut(s) | 29, 199, 305 |
| MaeI | CTAG | 1 cut(s) | 353 |
| MaeII | ACGT | 1 cut(s) | 36 |
| MaeIII | GTNAC | 4 cut(s) | 3, 260, 358, 441 |
| MboII | GAAGA | 5 cut(s) | 15, 65, 222, 264, 460 |
| MluCI | AATT | 1 cut(s) | 315 |
| MlyI | GAGTC | 2 cut(s) | 109, 319 |
| MmeI | TCCRAC | 3 cut(s) | 51, 137, 262 |
| MspR9I | CCNGG | 1 cut(s) | 375 |
| MvaI | CCWGG | 1 cut(s) | 375 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 89, 293 |
| NcoI | CCATGG | 1 cut(s) | 93 |
| NlaIII | CATG | 1 cut(s) | 97 |
| NlaIV | GGNNCC | 1 cut(s) | 410 |
| NmuCI | GTSAC | 2 cut(s) | 3, 441 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 24 |
| PfoI | TCCNGGA | 1 cut(s) | 373 |
| PkrI | GCNGC | 1 cut(s) | 159 |
| PleI | GAGTC | 2 cut(s) | 109, 318 |
| PpsI | GAGTC | 2 cut(s) | 109, 318 |
| Psp6I | CCWGG | 1 cut(s) | 373 |
| PspGI | CCWGG | 1 cut(s) | 373 |
| PspN4I | GGNNCC | 1 cut(s) | 410 |
| RsaI | GTAC | 1 cut(s) | 169 |
| RsaNI | GTAC | 1 cut(s) | 168 |
| SatI | GCNGC | 1 cut(s) | 158 |
| ScaI | AGTACT | 1 cut(s) | 169 |
| SchI | GAGTC | 2 cut(s) | 109, 319 |
| ScrFI | CCNGG | 1 cut(s) | 375 |
| SetI | ASST | 8 cut(s) | 39, 187, 289, 360, 417, 422, 464, 483 |
| SfaNI | GCATC | 3 cut(s) | 29, 199, 305 |
| Sse9I | AATT | 1 cut(s) | 315 |
| SspI | AATATT | 1 cut(s) | 438 |
| SspMI | CTAG | 1 cut(s) | 353 |
| StyD4I | CCNGG | 1 cut(s) | 373 |
| StyI | CCWWGG | 1 cut(s) | 93 |
| TaaI | ACNGT | 1 cut(s) | 494 |
| TaiI | ACGT | 1 cut(s) | 39 |
| TaqI | TCGA | 1 cut(s) | 195 |
| TasI | AATT | 1 cut(s) | 315 |
| TatI | WGTACW | 1 cut(s) | 167 |
| TscAI | CASTG | 1 cut(s) | 12 |
| TseFI | GTSAC | 2 cut(s) | 3, 441 |
| TseI | GCWGC | 1 cut(s) | 157 |
| Tsp45I | GTSAC | 2 cut(s) | 3, 441 |
| TspDTI | ATGAA | 3 cut(s) | 114, 135, 168 |
| TspRI | CASTG | 1 cut(s) | 12 |
| XapI | RAATTY | 1 cut(s) | 315 |
| XspI | CTAG | 1 cut(s) | 353 |
| ZrmI | AGTACT | 1 cut(s) | 169 |