Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005919

Physical Location & Seq

Genomic Coordinates Forward (+)

24574730 .. 24577070

Gene Structure 2341 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G214600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1155 bp

ATGAAGTTCTCTTTTCCCTGCTCAAAATGTTTCTCTTCACCTGGAATCATCGATGATAACACACACGGTTTACAATTTCTTCAAAATGTCCACGCCTTCACGTACAAAGAATTGAAAGTCGCCACCAATGATTTCCATCCATCCAATAAAATTGGTGAAGGTGGATTTGGATCTGTTTATAAGGGAAGACTTAATGACGGAGTAGATGTGGCTGTGAAAGTGCTTTCAGCTGAATCAAAGCAAGGAGACAGGGAGTTCATGTCCGAGCTAGCATCACTCTCCAACATTTGCCATCAAAATCTGGTCAAGATGCGCGGTGGCTGCATCGAAGGCTGCCGTCGAATTCTTGTTTATGATTACATGGAGCACAACAGCCTCGCACACATATTGTTTCAAGATGAGGAGAAAATTAGGTCAAAATTGAATTGGAGGGTACGGCGAGAAATTTGTCTAGGAATTGCTATGGGGCTTGCTCACATTCACGAGGAGGTAAAACCACACCTTGTGCACAGAGATATCAAAGCCAGCAACATACTTTTGGAGAAGAACTTTCATCCAAGAATCTCAGATTTTGGATTGTCAAAACTATTCCCAGAAAACATTACTCACATCAGTACACGAGTGGCTGGAACATTAGGCTATCTTGCTCCGGAATATGCCATTTCTGGACACCTAACCCGAAAGTCAGACGTATACAGTTTTGGAGTGTTGATTTTACAAATAGTCAGTGGAAGATCTGCAGTTGACTTTGATCTAGAACTTGGAGAACATTATCTTGTCCAAAAGGCATGGGAAATGTACAAGAGCAAGAGGCTTGTGGATCTGGTGGACTCTAGGCTTGAAGTTGATGGAAACTTTTCAGAAAAAGAAGCCATCGAGTTCTTAAAGTTGGGTCTGCTTTGCGTACAAGAGAAATGCAGCCTCCGGCCCCGCATGTCGACAGCCATTAAGCTCATGACGATGATGAACATCAAGGATGAGGTGAACATCAAGGATGAGATGACAATGAATTTGTTTATGAACGTGGAAATTTGTGAGCCAGGAGTTATTACTGATAAGATGGACCTAAAAATAGCCCACAGGACTGATAGAAGCTCACCACCTAGCAATATCTCCACCATGCCAAGCCCCCAACCTTACCCTTTTAGAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

385

Amino Acids

43.56

Weight (kDa)

7.24

Isoelectric Point (pI)

52.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005919)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g15760 FvH4_7g19720 FvH4_7g19720
malus_domestica	MD01G1109700.v1.1 MD04G1098900.v1.1 MD12G1119500.v1.1
prunus_persica	Prupe.2G214600_v2.0.a1 Prupe.6G237400_v2.0.a1 Prupe.6G237400_v2.0.a1
pyrus_communis	pycom01g13680 pycom04g09390 pycom12g11850
rosa_chinensis	RchiOBHm_Chr1g0363561
rosa_laevigata	RLG00000027557
rosa_multiflora	Rmu_sc0000548.1_g000001 Rmu_sc0004871.1_g000014 Rmu_ssc0000433.1_g000008
rosa_roxburghii	Rroxscaffold_4G00293080 Rroxscaffold_6G00411830
rosa_rugosa	Rorug01G0308100 Rorug03G0102000 Rorug03G0102100
rosa_samantha	Rh1BG280300 Rh1CG296400 Rh1DG311500 Rh3DG200700
rosa_wichuraiana	Rw1G028100 Rw3G014260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	180
AccI	GTMKAC	2 cut(s)	693, 938
AccII	CGCG	1 cut(s)	315
AccIII	TCCGGA	1 cut(s)	649
AciI	CCGC	2 cut(s)	315, 931
AclWI	GGATC	2 cut(s)	178, 828
AcsI	RAATTY	4 cut(s)	342, 444, 1009, 1029
AdeI	CACNNNGTG	1 cut(s)	505
AfaI	GTAC	5 cut(s)	104, 435, 616, 800, 906
AgsI	TTSAA	5 cut(s)	83, 115, 395, 424, 842
AjnI	CCWGG	2 cut(s)	40, 1039
AjuI	GAANNNNNNNTTGG	2 cut(s)	150, 182
AluBI	AGCT	4 cut(s)	230, 268, 952, 1095
AluI	AGCT	4 cut(s)	230, 268, 952, 1095
Alw21I	GWGCWC	2 cut(s)	369, 510
Alw26I	GTCTC	1 cut(s)	240
Alw44I	GTGCAC	1 cut(s)	506
AlwI	GGATC	2 cut(s)	178, 828
Aor13HI	TCCGGA	1 cut(s)	649
AoxI	GGCC	1 cut(s)	926
ApaLI	GTGCAC	1 cut(s)	506
ApeKI	GCWGC	3 cut(s)	321, 333, 918
ApoI	RAATTY	4 cut(s)	342, 444, 1009, 1029
ArsI	GACNNNNNNTTYG	2 cut(s)	994, 1026
Asp700I	GAANNNNTTC	1 cut(s)	856
AspLEI	GCGC	1 cut(s)	315
AspS9I	GGNCC	2 cut(s)	927, 1063
AsuHPI	GGTGA	4 cut(s)	30, 167, 994, 1089
AsuNHI	GCTAGC	1 cut(s)	268
AvaII	GGWCC	1 cut(s)	1063
BaeGI	GKGCMC	1 cut(s)	510
BauI	CACGAG	2 cut(s)	482, 618
BbsI	GAAGAC	1 cut(s)	193
Bbv12I	GWGCWC	2 cut(s)	369, 510
BbvI	GCAGC	3 cut(s)	308, 320, 930
BccI	CCATC	6 cut(s)	144, 148, 300, 842, 881, 1054
BceAI	ACGGC	2 cut(s)	321, 452
BciT130I	CCWGG	2 cut(s)	42, 1041
BcoDI	GTCTC	1 cut(s)	240
BfaI	CTAG	5 cut(s)	269, 452, 755, 834, 1104
BfmI	CTRYAG	1 cut(s)	738
BglII	AGATCT	1 cut(s)	734
BisI	GCNGC	3 cut(s)	322, 334, 919
BlsI	GCNGC	3 cut(s)	323, 335, 920
Bme1390I	CCNGG	2 cut(s)	42, 1041
Bme18I	GGWCC	1 cut(s)	1063
BmgT120I	GGNCC	2 cut(s)	927, 1063
BmiI	GGNNCC	1 cut(s)	929
BmrFI	CCNGG	2 cut(s)	42, 1041
BmsI	GCATC	3 cut(s)	281, 300, 333
BmtI	GCTAGC	1 cut(s)	272
BpiI	GAAGAC	1 cut(s)	193
Bsa29I	ATCGAT	1 cut(s)	51
BsaAI	YACGTR	1 cut(s)	102
BsaBI	GATNNNNATC	3 cut(s)	135, 169, 968
BsaWI	WCCGGW	1 cut(s)	649
BsaXI	ACNNNNNCTCC	4 cut(s)	192, 222, 245, 275
Bse8I	GATNNNNATC	3 cut(s)	135, 169, 968
BseAI	TCCGGA	1 cut(s)	649
BseBI	CCWGG	2 cut(s)	42, 1041
BseCI	ATCGAT	1 cut(s)	51
BseGI	GGATG	5 cut(s)	136, 140, 553, 982, 1000
BseJI	GATNNNNATC	3 cut(s)	135, 169, 968
BseMII	CTCAG	1 cut(s)	579
BseRI	GAGGAG	2 cut(s)	416, 500
BseSI	GKGCMC	1 cut(s)	510
BseXI	GCAGC	3 cut(s)	308, 320, 930
Bsh1236I	CGCG	1 cut(s)	315
BshFI	GGCC	1 cut(s)	928
BshVI	ATCGAT	1 cut(s)	51
BsiHKAI	GWGCWC	2 cut(s)	369, 510
BsiSI	CCGG	2 cut(s)	650, 925
BsmAI	GTCTC	1 cut(s)	240
BsnI	GGCC	1 cut(s)	928
Bsp1286I	GDGCHC	2 cut(s)	369, 510
Bsp13I	TCCGGA	1 cut(s)	649
Bsp1407I	TGTACA	1 cut(s)	798
Bsp143I	GATC	4 cut(s)	170, 734, 751, 820
BspACI	CCGC	2 cut(s)	315, 931
BspANI	GGCC	1 cut(s)	928
BspCNI	CTCAG	1 cut(s)	578
BspDI	ATCGAT	1 cut(s)	51
BspEI	TCCGGA	1 cut(s)	649
BspFNI	CGCG	1 cut(s)	315
BspHI	TCATGA	1 cut(s)	954
BspLI	GGNNCC	1 cut(s)	929
BspMAI	CTGCAG	1 cut(s)	742
BspOI	GCTAGC	1 cut(s)	272
BspPI	GGATC	2 cut(s)	178, 828
BsrGI	TGTACA	1 cut(s)	798
BssMI	GATC	4 cut(s)	170, 734, 751, 820
BssNAI	GTATAC	1 cut(s)	694
BssSI	CACGAG	2 cut(s)	482, 618
Bst1107I	GTATAC	1 cut(s)	694
Bst2BI	CACGAG	2 cut(s)	482, 618
Bst2UI	CCWGG	2 cut(s)	42, 1041
Bst4CI	ACNGT	2 cut(s)	68, 698
Bst6I	CTCTTC	1 cut(s)	40
BstAUI	TGTACA	1 cut(s)	798
BstBAI	YACGTR	1 cut(s)	102
BstC8I	GCNNGC	3 cut(s)	270, 471, 526
BstDEI	CTNAG	1 cut(s)	565
BstF5I	GGATG	5 cut(s)	136, 140, 553, 982, 1000
BstFNI	CGCG	1 cut(s)	315
BstHHI	GCGC	1 cut(s)	315
BstKTI	GATC	4 cut(s)	173, 737, 754, 823
BstMAI	GTCTC	1 cut(s)	240
BstMBI	GATC	4 cut(s)	170, 734, 751, 820
BstMWI	GCNNNNNNNGC	2 cut(s)	321, 330
BstNI	CCWGG	2 cut(s)	42, 1041
BstNSI	RCATGY	1 cut(s)	937
BstSCI	CCNGG	2 cut(s)	40, 1039
BstSFI	CTRYAG	1 cut(s)	738
BstSLI	GKGCMC	1 cut(s)	510
BstUI	CGCG	1 cut(s)	315
BstV1I	GCAGC	3 cut(s)	308, 320, 930
BstV2I	GAAGAC	1 cut(s)	193
BstX2I	RGATCY	3 cut(s)	170, 734, 820
BstYI	RGATCY	3 cut(s)	170, 734, 820
BstZ17I	GTATAC	1 cut(s)	694
Bsu15I	ATCGAT	1 cut(s)	51
BsuRI	GGCC	1 cut(s)	928
BsuTUI	ATCGAT	1 cut(s)	51
BtsCI	GGATG	5 cut(s)	136, 140, 553, 982, 1000
BtsIMutI	CAGTG	1 cut(s)	733
Cac8I	GCNNGC	3 cut(s)	270, 471, 526
CciI	TCATGA	1 cut(s)	954
CfoI	GCGC	1 cut(s)	315
Cfr13I	GGNCC	2 cut(s)	927, 1063
ClaI	ATCGAT	1 cut(s)	51
Csp6I	GTAC	5 cut(s)	103, 434, 615, 799, 905
CviAII	CATG	6 cut(s)	259, 361, 789, 934, 955, 1120
CviQI	GTAC	5 cut(s)	103, 434, 615, 799, 905
DdeI	CTNAG	1 cut(s)	565
DpnI	GATC	4 cut(s)	172, 736, 753, 822
DpnII	GATC	4 cut(s)	170, 734, 751, 820
DraIII	CACNNNGTG	1 cut(s)	505
Eam1104I	CTCTTC	1 cut(s)	40
EarI	CTCTTC	1 cut(s)	40
Eco32I	GATATC	1 cut(s)	517
Eco47I	GGWCC	1 cut(s)	1063
EcoRI	GAATTC	1 cut(s)	342
EcoRII	CCWGG	2 cut(s)	40, 1039
EcoRV	GATATC	1 cut(s)	517
FaeI	CATG	6 cut(s)	262, 364, 792, 937, 958, 1123
FatI	CATG	6 cut(s)	258, 360, 788, 933, 954, 1119
FauI	CCCGC	1 cut(s)	938
FblI	GTMKAC	2 cut(s)	693, 938
Fnu4HI	GCNGC	3 cut(s)	322, 334, 919
FokI	GGATG	5 cut(s)	123, 127, 540, 989, 1007
Fsp4HI	GCNGC	3 cut(s)	322, 334, 919
FspBI	CTAG	5 cut(s)	269, 452, 755, 834, 1104
GlaI	GCGC	1 cut(s)	314
GluI	GCNGC	3 cut(s)	322, 334, 919
HaeIII	GGCC	1 cut(s)	928
HapII	CCGG	2 cut(s)	650, 925
HhaI	GCGC	1 cut(s)	315
Hin1II	CATG	6 cut(s)	262, 364, 792, 937, 958, 1123
Hin6I	GCGC	1 cut(s)	313
HinP1I	GCGC	1 cut(s)	313
HincII	GTYRAC	2 cut(s)	745, 939
HindII	GTYRAC	2 cut(s)	745, 939
HinfI	GANTC	5 cut(s)	45, 233, 561, 830, 1149
HpaII	CCGG	2 cut(s)	650, 925
HphI	GGTGA	4 cut(s)	30, 167, 994, 1089
Hpy166II	GTNNAC	9 cut(s)	71, 91, 508, 617, 694, 745, 829, 939, 985
Hpy188I	TCNGA	4 cut(s)	265, 568, 688, 862
Hpy188III	TCNNGA	7 cut(s)	307, 395, 482, 650, 666, 755, 955
Hpy8I	GTNNAC	9 cut(s)	71, 91, 508, 617, 694, 745, 829, 939, 985
Hpy99I	CGWCG	1 cut(s)	342
HpyAV	CCTTC	3 cut(s)	106, 152, 323
HpyCH4III	ACNGT	2 cut(s)	68, 698
HpyCH4IV	ACGT	3 cut(s)	101, 690, 1023
HpyCH4V	TGCA	4 cut(s)	324, 508, 740, 918
HpyF10VI	GCNNNNNNNGC	2 cut(s)	321, 330
HpyF3I	CTNAG	1 cut(s)	565
HpySE526I	ACGT	3 cut(s)	101, 690, 1023
Hsp92II	CATG	6 cut(s)	262, 364, 792, 937, 958, 1123
HspAI	GCGC	1 cut(s)	313
Kpn2I	TCCGGA	1 cut(s)	649
Kzo9I	GATC	4 cut(s)	170, 734, 751, 820
LmnI	GCTCC	2 cut(s)	364, 652
Lsp1109I	GCAGC	3 cut(s)	308, 320, 930
LweI	GCATC	3 cut(s)	281, 300, 333
MaeI	CTAG	5 cut(s)	269, 452, 755, 834, 1104
MaeII	ACGT	3 cut(s)	101, 690, 1023
MalI	GATC	4 cut(s)	172, 736, 753, 822
MboI	GATC	4 cut(s)	170, 734, 751, 820
MboII	GAAGA	5 cut(s)	27, 71, 198, 556, 744
MflI	RGATCY	3 cut(s)	170, 734, 820
MhlI	GDGCHC	2 cut(s)	369, 510
MlyI	GAGTC	1 cut(s)	824
MmeI	TCCRAC	1 cut(s)	306
MnlI	CCTC	8 cut(s)	386, 394, 423, 478, 481, 804, 932, 973
MroI	TCCGGA	1 cut(s)	649
MroXI	GAANNNNTTC	1 cut(s)	856
MseI	TTAA	3 cut(s)	192, 884, 948
MslI	CAYNNNNRTG	1 cut(s)	959
MspA1I	CMGCKG	1 cut(s)	230
MspI	CCGG	2 cut(s)	650, 925
MspR9I	CCNGG	2 cut(s)	42, 1041
MvaI	CCWGG	2 cut(s)	42, 1041
MvnI	CGCG	1 cut(s)	315
MwoI	GCNNNNNNNGC	2 cut(s)	321, 330
NdeII	GATC	4 cut(s)	170, 734, 751, 820
NheI	GCTAGC	1 cut(s)	268
NlaIII	CATG	6 cut(s)	262, 364, 792, 937, 958, 1123
NlaIV	GGNNCC	1 cut(s)	929
NspI	RCATGY	1 cut(s)	937
PagI	TCATGA	1 cut(s)	954
PdmI	GAANNNNTTC	1 cut(s)	856
PfeI	GAWTC	4 cut(s)	45, 233, 561, 1149
PkrI	GCNGC	3 cut(s)	323, 335, 920
PleI	GAGTC	1 cut(s)	824
PpsI	GAGTC	1 cut(s)	824
Ppu21I	YACGTR	1 cut(s)	102
PsiI	TTATAA	1 cut(s)	180
Psp6I	CCWGG	2 cut(s)	40, 1039
PspGI	CCWGG	2 cut(s)	40, 1039
PspN4I	GGNNCC	1 cut(s)	929
PspPI	GGNCC	2 cut(s)	927, 1063
PstI	CTGCAG	1 cut(s)	742
PsuI	RGATCY	3 cut(s)	170, 734, 820
PvuII	CAGCTG	1 cut(s)	230
RsaI	GTAC	5 cut(s)	104, 435, 616, 800, 906
RsaNI	GTAC	5 cut(s)	103, 434, 615, 799, 905
RseI	CAYNNNNRTG	1 cut(s)	959
SalI	GTCGAC	1 cut(s)	937
SaqAI	TTAA	3 cut(s)	192, 884, 948
SatI	GCNGC	3 cut(s)	322, 334, 919
Sau3AI	GATC	4 cut(s)	170, 734, 751, 820
Sau96I	GGNCC	2 cut(s)	927, 1063
SchI	GAGTC	1 cut(s)	824
ScrFI	CCNGG	2 cut(s)	42, 1041
SduI	GDGCHC	2 cut(s)	369, 510
SfaNI	GCATC	3 cut(s)	281, 300, 333
SfcI	CTRYAG	1 cut(s)	738
SinI	GGWCC	1 cut(s)	1063
SmiMI	CAYNNNNRTG	1 cut(s)	959
SsiI	CCGC	2 cut(s)	315, 931
SspMI	CTAG	5 cut(s)	269, 452, 755, 834, 1104
StyD4I	CCNGG	2 cut(s)	40, 1039
TaaI	ACNGT	2 cut(s)	68, 698
TaiI	ACGT	3 cut(s)	104, 693, 1026
TaqI	TCGA	5 cut(s)	51, 327, 340, 876, 938
TatI	WGTACW	2 cut(s)	614, 798
TfiI	GAWTC	4 cut(s)	45, 233, 561, 1149
Tru1I	TTAA	3 cut(s)	192, 884, 948
Tru9I	TTAA	3 cut(s)	192, 884, 948
TscAI	CASTG	1 cut(s)	733
TseI	GCWGC	3 cut(s)	321, 333, 918
TspDTI	ATGAA	6 cut(s)	17, 247, 542, 980, 1022, 1034
TspGWI	ACGGA	1 cut(s)	213
TspRI	CASTG	1 cut(s)	733
VneI	GTGCAC	1 cut(s)	506
VpaK11BI	GGWCC	1 cut(s)	1063
XapI	RAATTY	4 cut(s)	342, 444, 1009, 1029
XbaI	TCTAGA	1 cut(s)	754
XceI	RCATGY	1 cut(s)	937
XmiI	GTMKAC	2 cut(s)	693, 938
XmnI	GAANNNNTTC	1 cut(s)	856
XspI	CTAG	5 cut(s)	269, 452, 755, 834, 1104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.