Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001586

Physical Location & Seq

Genomic Coordinates Forward (+)

26393077 .. 26396097

Gene Structure 3021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G247900.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 855 bp

ATGGCTAGAGGACGACCCAGAAAGAGGGATTCCCGCATGGATGCAGCCATTGATGCTATGACCCGTGAAATGGGTTTTGACGAGAGACTAGTTCGTGCCACAGTAAAAGAGCTACTGAAGGTTTATGGAGTGCGAGGATCTCCAGACCAAGGATGGCCCTTTATCGAAGAGTTTTCTTATAAACTCCTAATTGAGCAGCTTCTTGAAAAACAACAAGATGGTGCTGAAAATAGGGATGCTGCTCGACAAGGCGATGCAGCTCCACCAGACGATGCAGCTCCACCAGACGACGCTGTTCCACCAGATGACGCTGCTCCACTAGATGATGCAGCTCCAGATGATGCTGCTCCGTATGATGATGCATCAGCAGCAGTAGGGCCCTCAAGCATTGTTATTCTACCTACCTTCTCAGGGGCTGTGGACAGCAAATTGCAGACTCAGGATGCTTGTGACTCTACATCACAGACTAATGGACTTATTCATGCATCACTGATTAAGATTACAGGTGCTAAGGAGTGTCTCCCAGTAGATACTCTTGCACTGCGGAGGTGTAAACCTTGCTGTGGCTGGGCTTTTAGCAATGATGGGGAAGGTCCTGTGGAACAAAAATTGGGTCCATTGGCCGAGTCAGGTGCTGAGGAGTGTCTCCCGGTAGATACCCTTGCACCGCGGAGGCATAAACCGTGCTATGGCTGGGCTTTTAGCAATGATGGGGAAGGTCCTGTGGAACTACAACCGGGTCCATTGGCAGAGTCAGGTAAATTACTTATCAGGCCAGCTGAGAAGAGGAAGCGCAAGTCAGGGTGGGGTGTGAGACCTGAAGATATGCAAAGCTCTTTCACTTTGATGTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WIYLD

Protein Analysis

285

Amino Acids

30.6

Weight (kDa)

4.75

Isoelectric Point (pI)

56.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001586)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45248 AT1G45248 AT1G45248 AT1G45248 AT1G45248 AT2G40020 AT2G40020 AT2G40020 AT2G40020
fragaria_vesca	FvH4_2g13151 FvH4_2g13151 FvH4_2g13151 FvH4_2g13151 FvH4_2g13151 FvH4_2g13151 FvH4_2g13151 FvH4_7g23100 FvH4_7g24210 FvH4_7g24210
malus_domestica	MD01G1149600.v1.1 MD17G1067400.v1.1
prunus_persica	Prupe.2G247900_v2.0.a1 Prupe.2G247900_v2.0.a1 Prupe.2G247900_v2.0.a1
pyrus_communis	pycom01g16760 pycom07g19830 pycom17g06770
rosa_chinensis	RchiOBHm_Chr1g0369781 RchiOBHm_Chr6g0274431
rosa_laevigata	RLG00000013543 RLG00000027106
rosa_multiflora	Rmu_sc0001154.1_g000041 Rmu_sc0001289.1_g000015 Rmu_sc0007743.1_g000004
rosa_roxburghii	Rroxscaffold_4G00287390 Rroxscaffold_7G00194230
rosa_rugosa	Rorug01G0352100 Rorug01G0352200 Rorug01G0352300 Rorug06G0081800
rosa_samantha	Rh1AG360800 Rh1BG324500 Rh1CG337700 Rh1DG354900 Rh6AG198200 Rh6BG201500 Rh6CG202200 Rh6DG192700
rosa_wichuraiana	Rw1G031760 Rw6G017230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	180
AccII	CGCG	1 cut(s)	670
AciI	CCGC	4 cut(s)	34, 544, 668, 670
AclWI	GGATC	1 cut(s)	145
AcoI	YGGCCR	1 cut(s)	621
AcuI	CTGAAG	2 cut(s)	137, 840
AfiI	CCNNNNNNNGG	6 cut(s)	24, 70, 149, 411, 563, 689
AgsI	TTSAA	1 cut(s)	206
AhlI	ACTAGT	1 cut(s)	88
AluBI	AGCT	7 cut(s)	112, 199, 260, 278, 332, 779, 834
AluI	AGCT	7 cut(s)	112, 199, 260, 278, 332, 779, 834
Alw26I	GTCTC	4 cut(s)	79, 524, 650, 808
AlwI	GGATC	1 cut(s)	145
AlwNI	CAGNNNCTG	2 cut(s)	416, 635
AoxI	GGCC	4 cut(s)	155, 377, 621, 773
ApaI	GGGCCC	1 cut(s)	381
ApeKI	GCWGC	9 cut(s)	44, 196, 239, 257, 275, 311, 329, 344, 368
ArsI	GACNNNNNNTTYG	2 cut(s)	598, 630
AspLEI	GCGC	1 cut(s)	795
AspS9I	GGNCC	7 cut(s)	156, 377, 378, 593, 614, 719, 740
AsuC2I	CCSGG	2 cut(s)	650, 738
AvaII	GGWCC	4 cut(s)	593, 614, 719, 740
BaeGI	GKGCMC	1 cut(s)	381
BanII	GRGCYC	1 cut(s)	381
BbvCI	CCTCAGC	1 cut(s)	636
BbvI	GCAGC	9 cut(s)	56, 208, 226, 269, 287, 298, 331, 341, 380
BccI	CCATC	4 cut(s)	147, 212, 578, 704
BcgI	CGANNNNNNTGC	2 cut(s)	614, 648
BcnI	CCSGG	2 cut(s)	650, 738
BcoDI	GTCTC	4 cut(s)	79, 524, 650, 808
BcuI	ACTAGT	1 cut(s)	88
BfaI	CTAG	3 cut(s)	6, 89, 320
BisI	GCNGC	9 cut(s)	45, 197, 240, 258, 276, 312, 330, 345, 369
BlsI	GCNGC	9 cut(s)	46, 198, 241, 259, 277, 313, 331, 346, 370
Bme1390I	CCNGG	2 cut(s)	650, 738
Bme18I	GGWCC	4 cut(s)	593, 614, 719, 740
BmgT120I	GGNCC	7 cut(s)	156, 377, 378, 593, 614, 719, 740
BmiI	GGNNCC	3 cut(s)	379, 615, 741
BmrFI	CCNGG	2 cut(s)	650, 738
BmrI	ACTGGG	1 cut(s)	518
BmuI	ACTGGG	1 cut(s)	518
BpmI	CTGGAG	2 cut(s)	126, 318
Bpu10I	CCTNAGC	2 cut(s)	510, 636
BpuEI	CTTGAG	1 cut(s)	367
BpuMI	CCSGG	2 cut(s)	650, 738
BsaI	GGTCTC	1 cut(s)	808
BsaJI	CCNNGG	2 cut(s)	148, 668
Bsc4I	CCNNNNNNNGG	6 cut(s)	24, 70, 149, 411, 563, 689
Bse1I	ACTGG	1 cut(s)	524
Bse3DI	GCAATG	2 cut(s)	586, 712
BseDI	CCNNGG	2 cut(s)	148, 668
BseGI	GGATG	4 cut(s)	46, 158, 241, 448
BseLI	CCNNNNNNNGG	6 cut(s)	24, 70, 149, 411, 563, 689
BseMI	GCAATG	2 cut(s)	586, 712
BseMII	CTCAG	4 cut(s)	423, 452, 627, 771
BseNI	ACTGG	1 cut(s)	524
BseRI	GAGGAG	1 cut(s)	653
BseSI	GKGCMC	1 cut(s)	381
BseXI	GCAGC	9 cut(s)	56, 208, 226, 269, 287, 298, 331, 341, 380
BseYI	CCCAGC	2 cut(s)	567, 693
Bsh1236I	CGCG	1 cut(s)	670
BshFI	GGCC	4 cut(s)	157, 379, 623, 775
BsiSI	CCGG	2 cut(s)	650, 737
BslI	CCNNNNNNNGG	6 cut(s)	24, 70, 149, 411, 563, 689
BsmAI	GTCTC	4 cut(s)	79, 524, 650, 808
BsnI	GGCC	4 cut(s)	157, 379, 623, 775
Bso31I	GGTCTC	1 cut(s)	808
Bsp120I	GGGCCC	1 cut(s)	377
Bsp1286I	GDGCHC	1 cut(s)	381
Bsp143I	GATC	1 cut(s)	137
BspACI	CCGC	4 cut(s)	34, 544, 668, 670
BspANI	GGCC	4 cut(s)	157, 379, 623, 775
BspCNI	CTCAG	4 cut(s)	422, 451, 628, 772
BspFNI	CGCG	1 cut(s)	670
BspLI	GGNNCC	3 cut(s)	379, 615, 741
BspPI	GGATC	1 cut(s)	145
BspTNI	GGTCTC	1 cut(s)	808
BsrDI	GCAATG	2 cut(s)	586, 712
BsrI	ACTGG	1 cut(s)	524
BssECI	CCNNGG	2 cut(s)	148, 668
BssMI	GATC	1 cut(s)	137
BssT1I	CCWWGG	1 cut(s)	148
Bst4CI	ACNGT	2 cut(s)	103, 684
Bst6I	CTCTTC	2 cut(s)	162, 779
BstC8I	GCNNGC	1 cut(s)	777
BstDEI	CTNAG	5 cut(s)	409, 438, 510, 636, 780
BstDSI	CCRYGG	1 cut(s)	668
BstF5I	GGATG	4 cut(s)	46, 158, 241, 448
BstFNI	CGCG	1 cut(s)	670
BstHHI	GCGC	1 cut(s)	795
BstKTI	GATC	1 cut(s)	140
BstMAI	GTCTC	4 cut(s)	79, 524, 650, 808
BstMBI	GATC	1 cut(s)	137
BstMWI	GCNNNNNNNGC	2 cut(s)	53, 368
BstSCI	CCNGG	2 cut(s)	648, 736
BstSLI	GKGCMC	1 cut(s)	381
BstUI	CGCG	1 cut(s)	670
BstV1I	GCAGC	9 cut(s)	56, 208, 226, 269, 287, 298, 331, 341, 380
BstX2I	RGATCY	1 cut(s)	137
BstYI	RGATCY	1 cut(s)	137
BsuRI	GGCC	4 cut(s)	157, 379, 623, 775
BtgI	CCRYGG	1 cut(s)	668
BtgZI	GCGATG	1 cut(s)	267
BtsCI	GGATG	4 cut(s)	46, 158, 241, 448
BtsI	GCAGTG	1 cut(s)	539
BtsIMutI	CAGTG	2 cut(s)	488, 539
Cac8I	GCNNGC	1 cut(s)	777
CaiI	CAGNNNCTG	2 cut(s)	416, 635
CfoI	GCGC	1 cut(s)	795
Cfr13I	GGNCC	7 cut(s)	156, 377, 378, 593, 614, 719, 740
Cfr42I	CCGCGG	1 cut(s)	671
CseI	GACGC	2 cut(s)	299, 317
CviAII	CATG	2 cut(s)	37, 482
DdeI	CTNAG	5 cut(s)	409, 438, 510, 636, 780
DpnI	GATC	1 cut(s)	139
DpnII	GATC	1 cut(s)	137
EaeI	YGGCCR	1 cut(s)	621
Eam1104I	CTCTTC	2 cut(s)	162, 779
EarI	CTCTTC	2 cut(s)	162, 779
Eco130I	CCWWGG	1 cut(s)	148
Eco24I	GRGCYC	1 cut(s)	381
Eco31I	GGTCTC	1 cut(s)	808
Eco47I	GGWCC	4 cut(s)	593, 614, 719, 740
Eco57I	CTGAAG	2 cut(s)	137, 840
EcoO109I	RGGNCCY	4 cut(s)	377, 378, 593, 719
EcoT14I	CCWWGG	1 cut(s)	148
EcoT22I	ATGCAT	2 cut(s)	364, 487
EcoT38I	GRGCYC	1 cut(s)	381
ErhI	CCWWGG	1 cut(s)	148
FaeI	CATG	2 cut(s)	40, 485
FaiI	YATR	9 cut(s)	38, 59, 126, 180, 354, 483, 678, 690, 827
FatI	CATG	2 cut(s)	36, 481
FauI	CCCGC	1 cut(s)	41
Fnu4HI	GCNGC	9 cut(s)	45, 197, 240, 258, 276, 312, 330, 345, 369
FokI	GGATG	4 cut(s)	53, 165, 248, 455
FriOI	GRGCYC	1 cut(s)	381
Fsp4HI	GCNGC	9 cut(s)	45, 197, 240, 258, 276, 312, 330, 345, 369
FspBI	CTAG	3 cut(s)	6, 89, 320
GlaI	GCGC	1 cut(s)	794
GluI	GCNGC	9 cut(s)	45, 197, 240, 258, 276, 312, 330, 345, 369
GsaI	CCCAGC	2 cut(s)	571, 697
GsuI	CTGGAG	2 cut(s)	126, 318
HaeIII	GGCC	4 cut(s)	157, 379, 623, 775
HapII	CCGG	2 cut(s)	650, 737
HgaI	GACGC	2 cut(s)	299, 317
HhaI	GCGC	1 cut(s)	795
Hin1II	CATG	2 cut(s)	40, 485
Hin6I	GCGC	1 cut(s)	793
HinP1I	GCGC	1 cut(s)	793
HinfI	GANTC	5 cut(s)	29, 436, 452, 626, 752
HpaII	CCGG	2 cut(s)	650, 737
Hpy166II	GTNNAC	2 cut(s)	421, 554
Hpy188III	TCNNGA	4 cut(s)	143, 203, 335, 440
Hpy8I	GTNNAC	2 cut(s)	421, 554
Hpy99I	CGWCG	1 cut(s)	293
HpyAV	CCTTC	4 cut(s)	112, 415, 584, 710
HpyCH4III	ACNGT	2 cut(s)	103, 684
HpyF10VI	GCNNNNNNNGC	2 cut(s)	53, 368
HpyF3I	CTNAG	5 cut(s)	409, 438, 510, 636, 780
Hsp92II	CATG	2 cut(s)	40, 485
HspAI	GCGC	1 cut(s)	793
KspI	CCGCGG	1 cut(s)	671
Kzo9I	GATC	1 cut(s)	137
LmnI	GCTCC	5 cut(s)	265, 283, 319, 337, 352
Lsp1109I	GCAGC	9 cut(s)	56, 208, 226, 269, 287, 298, 331, 341, 380
MaeI	CTAG	3 cut(s)	6, 89, 320
MaeIII	GTNAC	1 cut(s)	449
MalI	GATC	1 cut(s)	139
MboI	GATC	1 cut(s)	137
MboII	GAAGA	3 cut(s)	179, 796, 833
MflI	RGATCY	1 cut(s)	137
MhlI	GDGCHC	1 cut(s)	381
MluCI	AATT	4 cut(s)	189, 428, 608, 761
MlyI	GAGTC	4 cut(s)	430, 446, 635, 761
MnlI	CCTC	7 cut(s)	18, 128, 391, 540, 631, 666, 780
Mph1103I	ATGCAT	2 cut(s)	364, 487
MseI	TTAA	1 cut(s)	495
MslI	CAYNNNNRTG	1 cut(s)	845
MspA1I	CMGCKG	2 cut(s)	670, 779
MspI	CCGG	2 cut(s)	650, 737
MspR9I	CCNGG	2 cut(s)	650, 738
MvnI	CGCG	1 cut(s)	670
MwoI	GCNNNNNNNGC	2 cut(s)	53, 368
NciI	CCSGG	2 cut(s)	650, 738
NdeII	GATC	1 cut(s)	137
NlaIII	CATG	2 cut(s)	40, 485
NlaIV	GGNNCC	3 cut(s)	379, 615, 741
NmeAIII	GCCGAG	1 cut(s)	649
NmuCI	GTSAC	1 cut(s)	449
NsiI	ATGCAT	2 cut(s)	364, 487
PfeI	GAWTC	1 cut(s)	29
PkrI	GCNGC	9 cut(s)	46, 198, 241, 259, 277, 313, 331, 346, 370
PleI	GAGTC	4 cut(s)	430, 446, 634, 760
PpsI	GAGTC	4 cut(s)	430, 446, 634, 760
PpuMI	RGGWCCY	2 cut(s)	593, 719
PsiI	TTATAA	1 cut(s)	180
Psp5II	RGGWCCY	2 cut(s)	593, 719
PspFI	CCCAGC	2 cut(s)	567, 693
PspN4I	GGNNCC	3 cut(s)	379, 615, 741
PspOMI	GGGCCC	1 cut(s)	377
PspPI	GGNCC	7 cut(s)	156, 377, 378, 593, 614, 719, 740
PspPPI	RGGWCCY	2 cut(s)	593, 719
PstNI	CAGNNNCTG	2 cut(s)	416, 635
PsuI	RGATCY	1 cut(s)	137
PvuII	CAGCTG	1 cut(s)	779
RseI	CAYNNNNRTG	1 cut(s)	845
SacII	CCGCGG	1 cut(s)	671
SaqAI	TTAA	1 cut(s)	495
SatI	GCNGC	9 cut(s)	45, 197, 240, 258, 276, 312, 330, 345, 369
Sau3AI	GATC	1 cut(s)	137
Sau96I	GGNCC	7 cut(s)	156, 377, 378, 593, 614, 719, 740
SchI	GAGTC	4 cut(s)	430, 446, 635, 761
ScrFI	CCNGG	2 cut(s)	650, 738
SduI	GDGCHC	1 cut(s)	381
Sfr303I	CCGCGG	1 cut(s)	671
SgrBI	CCGCGG	1 cut(s)	671
SinI	GGWCC	4 cut(s)	593, 614, 719, 740
SmiMI	CAYNNNNRTG	1 cut(s)	845
SmlI	CTYRAG	1 cut(s)	382
SmoI	CTYRAG	1 cut(s)	382
SpeI	ACTAGT	1 cut(s)	88
Sse9I	AATT	4 cut(s)	189, 428, 608, 761
SsiI	CCGC	4 cut(s)	34, 544, 668, 670
SspMI	CTAG	3 cut(s)	6, 89, 320
StyD4I	CCNGG	2 cut(s)	648, 736
StyI	CCWWGG	1 cut(s)	148
TaaI	ACNGT	2 cut(s)	103, 684
TaqI	TCGA	2 cut(s)	165, 244
TasI	AATT	4 cut(s)	189, 428, 608, 761
TfiI	GAWTC	1 cut(s)	29
Tru1I	TTAA	1 cut(s)	495
Tru9I	TTAA	1 cut(s)	495
TscAI	CASTG	2 cut(s)	495, 546
TseFI	GTSAC	1 cut(s)	449
TseI	GCWGC	9 cut(s)	44, 196, 239, 257, 275, 311, 329, 344, 368
Tsp45I	GTSAC	1 cut(s)	449
TspDTI	ATGAA	1 cut(s)	470
TspGWI	ACGGA	1 cut(s)	339
TspRI	CASTG	2 cut(s)	495, 546
VpaK11BI	GGWCC	4 cut(s)	593, 614, 719, 740
XcmI	CCANNNNNNNNNTGG	1 cut(s)	150
XspI	CTAG	3 cut(s)	6, 89, 320
Zsp2I	ATGCAT	2 cut(s)	364, 487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.