Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001975

Physical Location & Seq

Genomic Coordinates Reverse (-)

26501547 .. 26503485

Gene Structure 1939 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G249900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 681 bp

ATGACCACCAGAAGAAGGTTGGTTTCGGCAGCAGCTGTTTTGTGGGTTTTACTGCTCTTCGGCACCTTATTTGTAGTTGTGACTCGATTTGGCGACGATGGGGCCCTGCACGAGCCAAAAATTGGCAAAAGCGAGATCCTTGAGGAAGAGGATTTGGAGCAAGTGACCCACAATGTTTACTTCGATATCGAAATCAACGGAAAACCCATTGGCCGCATAGTCATGGGTCTCTTTGGAAAAACAGTCCCTAAAACCATAGAGAATTTTCGAGCACTTTGCACGGGGGAAAAAGGAACTGGAATGAGTAGGAAGCCTCTTCACTACAAAGGAAGTGCATTTCATAGGATTATTCCCAGCTTTATGATACAGGGAGGCGATTTTACTCTTGGTGATGGACGAGGTGGAGAATCAATTTACGGCGATAGCTTTGCAGATGAAAACTTCAAACTACAGCACACTGGGCCAGGTATTTTGTCAATGGCAAATGCCGGGCCAGACACGAATGGATCGCAATTCTTCATTACAACTGTCAAAACTAGCTGGTTGGATGGGAGGCATGTCGTATTCGGCAAGGTGCTTTCTGGAATGGATGTTGTGTACAAAGTTGAAGAAGTAGGAGGACAGAATGGGGTGCCTAAGAGTAGGGTTGTCATTACAGACAGCGGCGAACTTCCATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005783 GO:0005794 GO:0005795 GO:0005802 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0016020 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0031410 GO:0031982 GO:0031984 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0071704 GO:0071944 GO:0097708 GO:0098791 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase

Protein Analysis

227

Amino Acids

24.62

Weight (kDa)

6.31

Isoelectric Point (pI)

32.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29960 AT2G29960 AT2G29960 AT5G58710
fragaria_vesca	FvH4_3g38580 FvH4_7g24460
malus_domestica	MD01G1152800.v1.1 MD03G1070100.v1.1 MD07G1221700.v1.1 MD11G1073900.v1.1
prunus_persica	Prupe.2G249900_v2.0.a1 Prupe.2G249900_v2.0.a1 Prupe.6G057200_v2.0.a1
pyrus_communis	pycom01g17040 pycom03g05580 pycom07g20020 pycom11g06130
rosa_chinensis	RchiOBHm_Chr1g0370191 RchiOBHm_Chr5g0069561
rosa_laevigata	RLG00000027069 RLG00000036059 RLG00000036069 RLG00000036077
rosa_multiflora	Rmu_sc0000848.1_g000017 Rmu_sc0005633.1_g000002 Rmu_sc0011509.1_g000005
rosa_roxburghii	Rroxscaffold_1G00011440 Rroxscaffold_4G00286750 Rroxscaffold_4G00287260
rosa_rugosa	Rorug01G0354600 Rorug05G0398300
rosa_samantha	Rh1AG363100 Rh1AG363300 Rh1BG326200 Rh1BG326500 Rh1CG339500 Rh1CG339800 Rh1DG356700 Rh1DG356900 Rh5AG455700 Rh5BG474600
rosa_wichuraiana	Rw0G023080 Rw1G031950 Rw1G031970 Rw5G042470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	62, 631
AccB7I	CCANNNNNTGG	1 cut(s)	122
AciI	CCGC	2 cut(s)	214, 663
AclWI	GGATC	2 cut(s)	130, 514
AcoI	YGGCCR	1 cut(s)	211
AcsI	RAATTY	1 cut(s)	262
AfaI	GTAC	1 cut(s)	599
AfiI	CCNNNNNNNGG	2 cut(s)	15, 122
AgsI	TTSAA	2 cut(s)	445, 608
AjnI	CCWGG	1 cut(s)	463
AluBI	AGCT	4 cut(s)	35, 357, 426, 540
AluI	AGCT	4 cut(s)	35, 357, 426, 540
Alw21I	GWGCWC	1 cut(s)	274
Alw26I	GTCTC	1 cut(s)	233
AlwI	GGATC	2 cut(s)	130, 514
AlwNI	CAGNNNCTG	1 cut(s)	35
AoxI	GGCC	4 cut(s)	102, 211, 461, 491
ApaI	GGGCCC	1 cut(s)	106
ApeKI	GCWGC	2 cut(s)	29, 32
ApoI	RAATTY	1 cut(s)	262
AspS9I	GGNCC	4 cut(s)	102, 103, 461, 491
AsuC2I	CCSGG	1 cut(s)	490
AsuHPI	GGTGA	1 cut(s)	401
BaeGI	GKGCMC	1 cut(s)	106
BanI	GGYRCC	2 cut(s)	62, 631
BanII	GRGCYC	1 cut(s)	106
BauI	CACGAG	1 cut(s)	110
Bbv12I	GWGCWC	1 cut(s)	274
BbvI	GCAGC	2 cut(s)	41, 44
BccI	CCATC	3 cut(s)	92, 386, 542
BceAI	ACGGC	1 cut(s)	433
BcgI	CGANNNNNNTGC	4 cut(s)	258, 292, 410, 444
BciT130I	CCWGG	1 cut(s)	465
BcnI	CCSGG	1 cut(s)	490
BcoDI	GTCTC	1 cut(s)	233
BfaI	CTAG	1 cut(s)	537
BfmI	CTRYAG	1 cut(s)	449
BisI	GCNGC	4 cut(s)	30, 33, 214, 664
BlsI	GCNGC	4 cut(s)	31, 34, 215, 665
Bme1390I	CCNGG	2 cut(s)	465, 490
BmgT120I	GGNCC	4 cut(s)	102, 103, 461, 491
BmiI	GGNNCC	4 cut(s)	64, 103, 104, 633
BmrFI	CCNGG	2 cut(s)	465, 490
BmrI	ACTGGG	1 cut(s)	468
BmuI	ACTGGG	1 cut(s)	468
BpuEI	CTTGAG	1 cut(s)	161
BpuMI	CCSGG	1 cut(s)	490
BsaI	GGTCTC	1 cut(s)	233
Bsc4I	CCNNNNNNNGG	2 cut(s)	15, 122
Bse1I	ACTGG	2 cut(s)	301, 463
BseBI	CCWGG	1 cut(s)	465
BseGI	GGATG	2 cut(s)	553, 595
BseLI	CCNNNNNNNGG	2 cut(s)	15, 122
BseNI	ACTGG	2 cut(s)	301, 463
BseSI	GKGCMC	1 cut(s)	106
BseXI	GCAGC	2 cut(s)	41, 44
BseYI	CCCAGC	1 cut(s)	353
BsgI	GTGCAG	1 cut(s)	92
BshFI	GGCC	4 cut(s)	104, 213, 463, 493
BshNI	GGYRCC	2 cut(s)	62, 631
BsiHKAI	GWGCWC	1 cut(s)	274
BsiSI	CCGG	1 cut(s)	489
BslFI	GGGAC	1 cut(s)	230
BslI	CCNNNNNNNGG	2 cut(s)	15, 122
BsmAI	GTCTC	1 cut(s)	233
BsmFI	GGGAC	1 cut(s)	230
BsnI	GGCC	4 cut(s)	104, 213, 463, 493
Bso31I	GGTCTC	1 cut(s)	233
Bsp120I	GGGCCC	1 cut(s)	102
Bsp1286I	GDGCHC	2 cut(s)	106, 274
Bsp1407I	TGTACA	1 cut(s)	597
Bsp143I	GATC	2 cut(s)	135, 506
BspACI	CCGC	2 cut(s)	214, 663
BspANI	GGCC	4 cut(s)	104, 213, 463, 493
BspLI	GGNNCC	4 cut(s)	64, 103, 104, 633
BspPI	GGATC	2 cut(s)	130, 514
BspQI	GCTCTTC	1 cut(s)	62
BspT107I	GGYRCC	2 cut(s)	62, 631
BspTNI	GGTCTC	1 cut(s)	233
BsrGI	TGTACA	1 cut(s)	597
BsrI	ACTGG	2 cut(s)	301, 463
BssMI	GATC	2 cut(s)	135, 506
BssSI	CACGAG	1 cut(s)	110
Bst2BI	CACGAG	1 cut(s)	110
Bst2UI	CCWGG	1 cut(s)	465
Bst4CI	ACNGT	2 cut(s)	244, 529
Bst6I	CTCTTC	3 cut(s)	62, 141, 321
BstAUI	TGTACA	1 cut(s)	597
BstDEI	CTNAG	1 cut(s)	636
BstF5I	GGATG	2 cut(s)	553, 595
BstKTI	GATC	2 cut(s)	138, 509
BstMAI	GTCTC	1 cut(s)	233
BstMBI	GATC	2 cut(s)	135, 506
BstMWI	GCNNNNNNNGC	1 cut(s)	460
BstNI	CCWGG	1 cut(s)	465
BstNSI	RCATGY	1 cut(s)	560
BstSCI	CCNGG	2 cut(s)	463, 488
BstSFI	CTRYAG	1 cut(s)	449
BstSLI	GKGCMC	1 cut(s)	106
BstV1I	GCAGC	2 cut(s)	41, 44
BstX2I	RGATCY	1 cut(s)	135
BstYI	RGATCY	1 cut(s)	135
BsuRI	GGCC	4 cut(s)	104, 213, 463, 493
BtsCI	GGATG	2 cut(s)	553, 595
BtsIMutI	CAGTG	1 cut(s)	456
CaiI	CAGNNNCTG	1 cut(s)	35
Cfr13I	GGNCC	4 cut(s)	102, 103, 461, 491
Csp6I	GTAC	1 cut(s)	598
CviAII	CATG	2 cut(s)	223, 557
CviQI	GTAC	1 cut(s)	598
DdeI	CTNAG	1 cut(s)	636
DpnI	GATC	2 cut(s)	137, 508
DpnII	GATC	2 cut(s)	135, 506
EaeI	YGGCCR	1 cut(s)	211
Eam1104I	CTCTTC	3 cut(s)	62, 141, 321
EarI	CTCTTC	3 cut(s)	62, 141, 321
Eco24I	GRGCYC	1 cut(s)	106
Eco31I	GGTCTC	1 cut(s)	233
Eco32I	GATATC	1 cut(s)	187
EcoO109I	RGGNCCY	2 cut(s)	102, 103
EcoRII	CCWGG	1 cut(s)	463
EcoRV	GATATC	1 cut(s)	187
EcoT38I	GRGCYC	1 cut(s)	106
FaeI	CATG	2 cut(s)	226, 560
FaiI	YATR	6 cut(s)	218, 224, 257, 342, 362, 558
FaqI	GGGAC	1 cut(s)	230
FatI	CATG	2 cut(s)	222, 556
Fnu4HI	GCNGC	4 cut(s)	30, 33, 214, 664
FokI	GGATG	2 cut(s)	560, 602
FriOI	GRGCYC	1 cut(s)	106
Fsp4HI	GCNGC	4 cut(s)	30, 33, 214, 664
FspBI	CTAG	1 cut(s)	537
GluI	GCNGC	4 cut(s)	30, 33, 214, 664
GsaI	CCCAGC	1 cut(s)	357
HaeIII	GGCC	4 cut(s)	104, 213, 463, 493
HapII	CCGG	1 cut(s)	489
Hin1II	CATG	2 cut(s)	226, 560
HinfI	GANTC	2 cut(s)	82, 407
HpaII	CCGG	1 cut(s)	489
HphI	GGTGA	1 cut(s)	401
Hpy166II	GTNNAC	2 cut(s)	178, 598
Hpy188III	TCNNGA	1 cut(s)	582
Hpy8I	GTNNAC	2 cut(s)	178, 598
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	1 cut(s)	9
HpyCH4III	ACNGT	2 cut(s)	244, 529
HpyCH4V	TGCA	4 cut(s)	109, 279, 335, 431
HpyF10VI	GCNNNNNNNGC	1 cut(s)	460
HpyF3I	CTNAG	1 cut(s)	636
Hsp92II	CATG	2 cut(s)	226, 560
Kzo9I	GATC	2 cut(s)	135, 506
LguI	GCTCTTC	1 cut(s)	62
LmnI	GCTCC	1 cut(s)	157
Lsp1109I	GCAGC	2 cut(s)	41, 44
MaeI	CTAG	1 cut(s)	537
MaeIII	GTNAC	2 cut(s)	79, 163
MalI	GATC	2 cut(s)	137, 508
MboI	GATC	2 cut(s)	135, 506
MboII	GAAGA	6 cut(s)	24, 49, 158, 308, 508, 620
MflI	RGATCY	1 cut(s)	135
MhlI	GDGCHC	2 cut(s)	106, 274
MluCI	AATT	4 cut(s)	120, 262, 411, 512
MlyI	GAGTC	1 cut(s)	76
MmeI	TCCRAC	1 cut(s)	525
MnlI	CCTC	7 cut(s)	136, 142, 324, 365, 392, 546, 611
MslI	CAYNNNNRTG	1 cut(s)	221
MspA1I	CMGCKG	2 cut(s)	35, 663
MspI	CCGG	1 cut(s)	489
MspR9I	CCNGG	2 cut(s)	465, 490
MvaI	CCWGG	1 cut(s)	465
MwoI	GCNNNNNNNGC	1 cut(s)	460
NciI	CCSGG	1 cut(s)	490
NdeII	GATC	2 cut(s)	135, 506
NlaIII	CATG	2 cut(s)	226, 560
NlaIV	GGNNCC	4 cut(s)	64, 103, 104, 633
NmuCI	GTSAC	2 cut(s)	79, 163
NspI	RCATGY	1 cut(s)	560
PciSI	GCTCTTC	1 cut(s)	62
PfeI	GAWTC	1 cut(s)	407
PflMI	CCANNNNNTGG	1 cut(s)	122
PkrI	GCNGC	4 cut(s)	31, 34, 215, 665
PleI	GAGTC	1 cut(s)	76
PpsI	GAGTC	1 cut(s)	76
Psp6I	CCWGG	1 cut(s)	463
PspFI	CCCAGC	1 cut(s)	353
PspGI	CCWGG	1 cut(s)	463
PspN4I	GGNNCC	4 cut(s)	64, 103, 104, 633
PspOMI	GGGCCC	1 cut(s)	102
PspPI	GGNCC	4 cut(s)	102, 103, 461, 491
PstNI	CAGNNNCTG	1 cut(s)	35
PsuI	RGATCY	1 cut(s)	135
PvuII	CAGCTG	1 cut(s)	35
RsaI	GTAC	1 cut(s)	599
RsaNI	GTAC	1 cut(s)	598
RseI	CAYNNNNRTG	1 cut(s)	221
SapI	GCTCTTC	1 cut(s)	62
SatI	GCNGC	4 cut(s)	30, 33, 214, 664
Sau3AI	GATC	2 cut(s)	135, 506
Sau96I	GGNCC	4 cut(s)	102, 103, 461, 491
SchI	GAGTC	1 cut(s)	76
ScrFI	CCNGG	2 cut(s)	465, 490
SduI	GDGCHC	2 cut(s)	106, 274
SetI	ASST	9 cut(s)	20, 37, 68, 359, 403, 428, 469, 542, 576
SfcI	CTRYAG	1 cut(s)	449
SmiMI	CAYNNNNRTG	1 cut(s)	221
SmlI	CTYRAG	1 cut(s)	140
SmoI	CTYRAG	1 cut(s)	140
Sse9I	AATT	4 cut(s)	120, 262, 411, 512
SsiI	CCGC	2 cut(s)	214, 663
SspMI	CTAG	1 cut(s)	537
StyD4I	CCNGG	2 cut(s)	463, 488
TaaI	ACNGT	2 cut(s)	244, 529
TaqI	TCGA	4 cut(s)	85, 183, 189, 268
TasI	AATT	4 cut(s)	120, 262, 411, 512
TatI	WGTACW	1 cut(s)	597
TauI	GCSGC	2 cut(s)	216, 666
TfiI	GAWTC	1 cut(s)	407
TscAI	CASTG	1 cut(s)	463
TseFI	GTSAC	2 cut(s)	79, 163
TseI	GCWGC	2 cut(s)	29, 32
Tsp45I	GTSAC	2 cut(s)	79, 163
TspDTI	ATGAA	3 cut(s)	329, 450, 508
TspGWI	ACGGA	1 cut(s)	213
TspRI	CASTG	1 cut(s)	463
Van91I	CCANNNNNTGG	1 cut(s)	122
XapI	RAATTY	1 cut(s)	262
XceI	RCATGY	1 cut(s)	560
XcmI	CCANNNNNNNNNTGG	1 cut(s)	16
XspI	CTAG	1 cut(s)	537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.