RchiOBHm_Chr1g0370191

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
59720888 .. 59722050
1163 bp
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UTR
Exon/CDS
Intron
PRQ59435

Sequence Viewer

Length: 321 bp
ATGCCCAGAAGGTTGGTTTCTGCCGCAGCTCTTTTGTGGGGTTTGCTTCTCTTGGCGACATTAGTTGTCATTCTGAATCGATTTAGCAATGATAAAGTCCTATCAGAACCAAACACCCTCAAAAGCAAAAGTGAGATTGTTGAGGAAAGTGATGATCTGGAACAAGTCACCCACCAAGTTTTCTTCGATATCGAAATCGATGGAAAACCCATTGGTCGCATAGTCATGGGTCTCTTTGGAAAAACAGTTCCAAAAACCATAGAGAACTTTCGAGCACTATGCACTGGTAGCCAAGGGAGAAGGGAATTGGAAAGAGTATGA

Protein Analysis

106

Amino Acids

11.88

Weight (kDa)

6.58

Isoelectric Point (pI)

47.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 24
AloI GAACNNNNNNTCC 2 cut(s) 231, 263
AluBI AGCT 1 cut(s) 29
AluI AGCT 1 cut(s) 29
Alw21I GWGCWC 1 cut(s) 277
Alw26I GTCTC 1 cut(s) 236
ApeKI GCWGC 1 cut(s) 26
AsuHPI GGTGA 1 cut(s) 160
Bbv12I GWGCWC 1 cut(s) 277
BbvI GCAGC 1 cut(s) 38
BccI CCATC 1 cut(s) 194
BcgI CGANNNNNNTGC 2 cut(s) 261, 295
BcoDI GTCTC 1 cut(s) 236
BisI GCNGC 2 cut(s) 24, 27
BlsI GCNGC 2 cut(s) 25, 28
Bsa29I ATCGAT 2 cut(s) 79, 198
BsaI GGTCTC 1 cut(s) 236
BsaJI CCNNGG 1 cut(s) 292
Bse1I ACTGG 1 cut(s) 289
Bse3DI GCAATG 1 cut(s) 94
BseCI ATCGAT 2 cut(s) 79, 198
BseDI CCNNGG 1 cut(s) 292
BseMI GCAATG 1 cut(s) 94
BseNI ACTGG 1 cut(s) 289
BseXI GCAGC 1 cut(s) 38
BshVI ATCGAT 2 cut(s) 79, 198
BsiHKAI GWGCWC 1 cut(s) 277
BsmAI GTCTC 1 cut(s) 236
Bso31I GGTCTC 1 cut(s) 236
Bsp1286I GDGCHC 1 cut(s) 277
Bsp143I GATC 1 cut(s) 154
BspACI CCGC 1 cut(s) 24
BspDI ATCGAT 2 cut(s) 79, 198
BspTNI GGTCTC 1 cut(s) 236
BsrDI GCAATG 1 cut(s) 94
BsrI ACTGG 1 cut(s) 289
BssECI CCNNGG 1 cut(s) 292
BssMI GATC 1 cut(s) 154
BssT1I CCWWGG 1 cut(s) 292
Bst4CI ACNGT 1 cut(s) 247
BstKTI GATC 1 cut(s) 157
BstMAI GTCTC 1 cut(s) 236
BstMBI GATC 1 cut(s) 154
BstMWI GCNNNNNNNGC 1 cut(s) 288
BstV1I GCAGC 1 cut(s) 38
BstXI CCANNNNNNTGG 1 cut(s) 13
Bsu15I ATCGAT 2 cut(s) 79, 198
BsuTUI ATCGAT 2 cut(s) 79, 198
BtsIMutI CAGTG 1 cut(s) 282
ClaI ATCGAT 2 cut(s) 79, 198
CviAII CATG 1 cut(s) 226
CviJI RGCY 2 cut(s) 29, 291
CviKI_1 RGCY 2 cut(s) 29, 291
DpnI GATC 1 cut(s) 156
DpnII GATC 1 cut(s) 154
Eco130I CCWWGG 1 cut(s) 292
Eco31I GGTCTC 1 cut(s) 236
Eco32I GATATC 1 cut(s) 190
EcoRV GATATC 1 cut(s) 190
EcoT14I CCWWGG 1 cut(s) 292
ErhI CCWWGG 1 cut(s) 292
FaeI CATG 1 cut(s) 229
FaiI YATR 5 cut(s) 221, 227, 260, 280, 319
FatI CATG 1 cut(s) 225
Fnu4HI GCNGC 2 cut(s) 24, 27
Fsp4HI GCNGC 2 cut(s) 24, 27
GluI GCNGC 2 cut(s) 24, 27
Hin1II CATG 1 cut(s) 229
HinfI GANTC 1 cut(s) 76
HphI GGTGA 1 cut(s) 160
Hpy188I TCNGA 2 cut(s) 75, 106
Hpy188III TCNNGA 1 cut(s) 158
HpyAV CCTTC 2 cut(s) 3, 294
HpyCH4III ACNGT 1 cut(s) 247
HpyCH4V TGCA 1 cut(s) 282
HpyF10VI GCNNNNNNNGC 1 cut(s) 288
Hsp92II CATG 1 cut(s) 229
Kzo9I GATC 1 cut(s) 154
LpnPI CCDG 3 cut(s) 19, 143, 270
Lsp1109I GCAGC 1 cut(s) 38
MaeIII GTNAC 1 cut(s) 166
MalI GATC 1 cut(s) 156
MboI GATC 1 cut(s) 154
MboII GAAGA 1 cut(s) 175
MhlI GDGCHC 1 cut(s) 277
MluCI AATT 1 cut(s) 305
MnlI CCTC 2 cut(s) 128, 136
MslI CAYNNNNRTG 1 cut(s) 224
MwoI GCNNNNNNNGC 1 cut(s) 288
NdeII GATC 1 cut(s) 154
NlaIII CATG 1 cut(s) 229
NmuCI GTSAC 1 cut(s) 166
PfeI GAWTC 1 cut(s) 76
PkrI GCNGC 2 cut(s) 25, 28
RseI CAYNNNNRTG 1 cut(s) 224
SatI GCNGC 2 cut(s) 24, 27
Sau3AI GATC 1 cut(s) 154
SduI GDGCHC 1 cut(s) 277
SetI ASST 2 cut(s) 14, 31
SgeI CNNG 9 cut(s) 18, 64, 170, 176, 188, 238, 284, 297, 305
SmiMI CAYNNNNRTG 1 cut(s) 224
Sse9I AATT 1 cut(s) 305
SsiI CCGC 1 cut(s) 24
StyI CCWWGG 1 cut(s) 292
TaaI ACNGT 1 cut(s) 247
TaqI TCGA 5 cut(s) 79, 186, 192, 198, 271
TasI AATT 1 cut(s) 305
TauI GCSGC 1 cut(s) 26
TfiI GAWTC 1 cut(s) 76
TscAI CASTG 1 cut(s) 289
TseFI GTSAC 1 cut(s) 166
TseI GCWGC 1 cut(s) 26
Tsp45I GTSAC 1 cut(s) 166
TspRI CASTG 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.