Prupe.2G251400_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
26586173 .. 26587976
1804 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G251400.2

Sequence Viewer

Length: 1152 bp
ATGTCCTCCTCAGCATACAAGCAACAGCTACCAAACATGCACGGCGGCGCCACCTCAGCACCACCGCCAACTCCTTCGACGCAGCCCAACAACCTCCTATCCACGTCATCAGGTGCCACGGCGGACACCCTCTCGAGGCTCCTCCACCGCCTTCCCCCCACTCTCTCCCTTCCCAAGCGCCGCTCACCGCCAGCCACGTGTCCACCTTCCGTCTCCTTATCCGACGTCCAAGCCAACTTGAGTACCCTCTTCTCCTCCTCGTCCCAGCTCGGCTTCTTCCAACTCACCAACCACTCCGTCCCGTTCCAACTCGCCAACTCGGCCGAGTCGGAAGCGCTCTCTCTTTTCGACCTTCCTAGGCACCAAAAGGAGTCATTTTTCCCCAAGTGCTGGCCTCTGGGGTTTGAAGGGGACGACGATGACGAGGACGATGACGGAGACGCACTCGGCGAGTCATTCTGTCTGGACTCGTCGTGTTCTACCGAGTCCACTGAGTTGTGTTTAACTTCTCTGCGTGAGTTCACTCGTGCTTTAGAGAAAGTGGGGCTGGAGATCGTTGAGCTGTTGTGTAGGTCAGCAGGGTTTGAGAATCCTCTGGGGAAGGACGACCCGACCCGGTTTTCGTCCATGATGTGGATCTCGGAGGGTAAAAAGTCACCGATGGTGGGTCGGTTTTACCCGCATGTAGTCGGGTTACAGTACCAAATCCGAAGTGGTCAGAAGTACTCTCTGCTGGCGGATTCGGGTTGGGTCTCTGTGTTGCCGCCGGTTGAGTCAATTTTGGTTACCATTGGTGACATTGCTCAAGTGTGGAGCAATGGGAAATTTAAAAAGGTGAGAGGAAGGGCAGTGGCATGTTTGGGAGAGGGTGAGTGTCGGTGCATATCAATGTCGCTGTTGGTGACTCTTCCTATAGACAGTACCAGTAGAGTGGGTCCTCTTGTTCCAATATCAGCCGTTGATGGTGGTCATGATGGGGATAGAAATGACAGAGATGATGATGATGGTGGAGATCAAAACTTGAATGGGAAGAGTGATGGTGAGAAGGAAGGAAGGTTGTTTAAGTCATTTTCTTTGGAAGACTATGCTTGGAGAGTGTACCATGAGCGGCTCTTTCTCAAAGACCCCTTGGATAGATACCGTTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

384

Amino Acids

41.97

Weight (kDa)

5.07

Isoelectric Point (pI)

48.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 228
AccB1I GGYRCC 3 cut(s) 47, 113, 360
AccB7I CCANNNNNTGG 2 cut(s) 390, 633
AccBSI CCGCTC 2 cut(s) 183, 1108
AclWI GGATC 1 cut(s) 644
AcoI YGGCCR 1 cut(s) 321
AcsI RAATTY 1 cut(s) 824
AcvI CACGTG 1 cut(s) 198
AcyI GRCGYC 2 cut(s) 48, 225
AfaI GTAC 5 cut(s) 244, 701, 725, 922, 1100
AfeI AGCGCT 1 cut(s) 336
AfiI CCNNNNNNNGG 4 cut(s) 135, 390, 633, 665
AflIII ACRYGT 1 cut(s) 197
AgsI TTSAA 2 cut(s) 407, 1024
AjiI CACGTC 1 cut(s) 105
AluBI AGCT 3 cut(s) 28, 268, 562
AluI AGCT 3 cut(s) 28, 268, 562
Alw26I GTCTC 3 cut(s) 217, 432, 757
AlwI GGATC 1 cut(s) 644
Ama87I CYCGRG 1 cut(s) 133
Aor51HI AGCGCT 1 cut(s) 336
AoxI GGCC 2 cut(s) 321, 392
ApeKI GCWGC 1 cut(s) 82
ApoI RAATTY 1 cut(s) 824
ArsI GACNNNNNNTTYG 2 cut(s) 604, 636
AspA2I CCTAGG 1 cut(s) 356
AspLEI GCGC 3 cut(s) 50, 180, 337
AspS9I GGNCC 1 cut(s) 935
AsuC2I CCSGG 1 cut(s) 616
AsuHPI GGTGA 8 cut(s) 177, 277, 648, 806, 847, 881, 913, 1052
AvaI CYCGRG 1 cut(s) 133
AvaII GGWCC 1 cut(s) 935
AvrII CCTAGG 1 cut(s) 356
BaeI ACNNNNGTAYC 2 cut(s) 226, 259
BanI GGYRCC 3 cut(s) 47, 113, 360
BauI CACGAG 1 cut(s) 525
BbrPI CACGTG 1 cut(s) 198
BbsI GAAGAC 1 cut(s) 1086
BbvCI CCTCAGC 2 cut(s) 10, 55
BbvI GCAGC 1 cut(s) 94
BccI CCATC 5 cut(s) 655, 956, 968, 998, 1031
BceAI ACGGC 3 cut(s) 58, 135, 941
BcnI CCSGG 1 cut(s) 616
BcoDI GTCTC 3 cut(s) 217, 432, 757
BfaI CTAG 1 cut(s) 357
BfmI CTRYAG 1 cut(s) 912
BfoI RGCGCY 3 cut(s) 51, 181, 338
BglI GCCNNNNNGGC 1 cut(s) 320
BisI GCNGC 5 cut(s) 46, 83, 181, 764, 1109
BlnI CCTAGG 1 cut(s) 356
BlsI GCNGC 5 cut(s) 47, 84, 182, 765, 1110
BmcAI AGTACT 1 cut(s) 725
Bme1390I CCNGG 1 cut(s) 616
Bme18I GGWCC 1 cut(s) 935
BmeT110I CYCGRG 1 cut(s) 133
BmgBI CACGTC 1 cut(s) 105
BmgT120I GGNCC 1 cut(s) 935
BmiI GGNNCC 5 cut(s) 49, 115, 140, 362, 936
BmrFI CCNGG 1 cut(s) 616
BpiI GAAGAC 1 cut(s) 1086
BplI GAGNNNNNCTC 2 cut(s) 429, 461
BpmI CTGGAG 1 cut(s) 569
Bpu10I CCTNAGC 2 cut(s) 10, 55
BpuEI CTTGAG 2 cut(s) 259, 789
BpuMI CCSGG 1 cut(s) 616
BsaAI YACGTR 1 cut(s) 198
BsaBI GATNNNNATC 1 cut(s) 635
BsaHI GRCGYC 2 cut(s) 48, 225
BsaI GGTCTC 1 cut(s) 757
BsaJI CCNNGG 3 cut(s) 117, 356, 1128
Bsc4I CCNNNNNNNGG 4 cut(s) 135, 390, 633, 665
Bse118I RCCGGY 1 cut(s) 766
Bse1I ACTGG 1 cut(s) 924
Bse3DI GCAATG 2 cut(s) 798, 823
Bse8I GATNNNNATC 1 cut(s) 635
BseDI CCNNGG 3 cut(s) 117, 356, 1128
BseJI GATNNNNATC 1 cut(s) 635
BseLI CCNNNNNNNGG 4 cut(s) 135, 390, 633, 665
BseMI GCAATG 2 cut(s) 798, 823
BseMII CTCAG 3 cut(s) 24, 69, 483
BseNI ACTGG 1 cut(s) 924
BseRI GAGGAG 3 cut(s) 131, 244, 247
BseX3I CGGCCG 1 cut(s) 321
BseXI GCAGC 1 cut(s) 94
BseYI CCCAGC 1 cut(s) 264
Bsh1285I CGRYCG 1 cut(s) 324
BshFI GGCC 2 cut(s) 323, 394
BshNI GGYRCC 3 cut(s) 47, 113, 360
BsiEI CGRYCG 1 cut(s) 324
BsiHKCI CYCGRG 1 cut(s) 133
BsiSI CCGG 2 cut(s) 616, 767
BslFI GGGAC 3 cut(s) 247, 284, 425
BslI CCNNNNNNNGG 4 cut(s) 135, 390, 633, 665
BsmAI GTCTC 3 cut(s) 217, 432, 757
BsmBI CGTCTC 2 cut(s) 217, 432
BsmFI GGGAC 3 cut(s) 247, 284, 425
BsnI GGCC 2 cut(s) 323, 394
Bso31I GGTCTC 1 cut(s) 757
BsoBI CYCGRG 1 cut(s) 133
Bsp143I GATC 3 cut(s) 552, 636, 1012
BspANI GGCC 2 cut(s) 323, 394
BspCNI CTCAG 3 cut(s) 23, 68, 484
BspHI TCATGA 1 cut(s) 970
BspLI GGNNCC 5 cut(s) 49, 115, 140, 362, 936
BspPI GGATC 1 cut(s) 644
BspT107I GGYRCC 3 cut(s) 47, 113, 360
BspTNI GGTCTC 1 cut(s) 757
BsrBI CCGCTC 2 cut(s) 183, 1108
BsrDI GCAATG 2 cut(s) 798, 823
BsrFI RCCGGY 1 cut(s) 766
BsrI ACTGG 1 cut(s) 924
BssAI RCCGGY 1 cut(s) 766
BssECI CCNNGG 3 cut(s) 117, 356, 1128
BssMI GATC 3 cut(s) 552, 636, 1012
BssNI GRCGYC 2 cut(s) 48, 225
BssSI CACGAG 1 cut(s) 525
BssT1I CCWWGG 2 cut(s) 356, 1128
Bst2BI CACGAG 1 cut(s) 525
Bst4CI ACNGT 3 cut(s) 699, 920, 1142
Bst6I CTCTTC 3 cut(s) 254, 912, 1025
BstACI GRCGYC 2 cut(s) 48, 225
BstBAI YACGTR 1 cut(s) 198
BstC8I GCNNGC 3 cut(s) 192, 392, 735
BstDEI CTNAG 3 cut(s) 10, 55, 492
BstDSI CCRYGG 1 cut(s) 117
BstEII GGTNACC 1 cut(s) 784
BstH2I RGCGCY 3 cut(s) 51, 181, 338
BstHHI GCGC 3 cut(s) 50, 180, 337
BstKTI GATC 3 cut(s) 555, 639, 1015
BstMAI GTCTC 3 cut(s) 217, 432, 757
BstMBI GATC 3 cut(s) 552, 636, 1012
BstMCI CGRYCG 1 cut(s) 324
BstMWI GCNNNNNNNGC 2 cut(s) 56, 320
BstNSI RCATGY 3 cut(s) 40, 686, 858
BstPI GGTNACC 1 cut(s) 784
BstSCI CCNGG 1 cut(s) 614
BstSFI CTRYAG 1 cut(s) 912
BstV1I GCAGC 1 cut(s) 94
BstV2I GAAGAC 1 cut(s) 1086
BstX2I RGATCY 1 cut(s) 636
BstXI CCANNNNNNTGG 1 cut(s) 931
BstYI RGATCY 1 cut(s) 636
BstZI CGGCCG 1 cut(s) 321
BsuRI GGCC 2 cut(s) 323, 394
BtgI CCRYGG 1 cut(s) 117
BtrI CACGTC 1 cut(s) 105
BtsI GCAGTG 1 cut(s) 855
BtsIMutI CAGTG 2 cut(s) 489, 855
Cac8I GCNNGC 3 cut(s) 192, 392, 735
CciI TCATGA 1 cut(s) 970
CfoI GCGC 3 cut(s) 50, 180, 337
Cfr10I RCCGGY 1 cut(s) 766
Cfr13I GGNCC 1 cut(s) 935
CseI GACGC 2 cut(s) 88, 449
Csp6I GTAC 5 cut(s) 243, 700, 724, 921, 1099
CviAII CATG 6 cut(s) 37, 628, 683, 855, 971, 1103
CviQI GTAC 5 cut(s) 243, 700, 724, 921, 1099
DdeI CTNAG 3 cut(s) 10, 55, 492
DinI GGCGCC 1 cut(s) 49
DpnI GATC 3 cut(s) 554, 638, 1014
DpnII GATC 3 cut(s) 552, 636, 1012
DraI TTTAAA 1 cut(s) 829
EaeI YGGCCR 1 cut(s) 321
EagI CGGCCG 1 cut(s) 321
Eam1104I CTCTTC 3 cut(s) 254, 912, 1025
EarI CTCTTC 3 cut(s) 254, 912, 1025
EciI GGCGGA 2 cut(s) 137, 752
EclXI CGGCCG 1 cut(s) 321
Eco130I CCWWGG 2 cut(s) 356, 1128
Eco31I GGTCTC 1 cut(s) 757
Eco47I GGWCC 1 cut(s) 935
Eco47III AGCGCT 1 cut(s) 336
Eco52I CGGCCG 1 cut(s) 321
Eco72I CACGTG 1 cut(s) 198
Eco88I CYCGRG 1 cut(s) 133
Eco91I GGTNACC 1 cut(s) 784
EcoO109I RGGNCCY 1 cut(s) 935
EcoO65I GGTNACC 1 cut(s) 784
EcoT14I CCWWGG 2 cut(s) 356, 1128
EgeI GGCGCC 1 cut(s) 49
EheI GGCGCC 1 cut(s) 49
ErhI CCWWGG 2 cut(s) 356, 1128
Esp3I CGTCTC 2 cut(s) 217, 432
FaeI CATG 6 cut(s) 40, 631, 686, 858, 974, 1106
FaqI GGGAC 3 cut(s) 247, 284, 425
FatI CATG 6 cut(s) 36, 627, 682, 854, 970, 1102
FauI CCCGC 1 cut(s) 687
Fnu4HI GCNGC 5 cut(s) 46, 83, 181, 764, 1109
Fsp4HI GCNGC 5 cut(s) 46, 83, 181, 764, 1109
FspBI CTAG 1 cut(s) 357
GlaI GCGC 3 cut(s) 49, 179, 336
GluI GCNGC 5 cut(s) 46, 83, 181, 764, 1109
GsaI CCCAGC 1 cut(s) 268
GsuI CTGGAG 1 cut(s) 569
HaeII RGCGCY 3 cut(s) 51, 181, 338
HaeIII GGCC 2 cut(s) 323, 394
HapII CCGG 2 cut(s) 616, 767
HgaI GACGC 2 cut(s) 88, 449
HhaI GCGC 3 cut(s) 50, 180, 337
Hin1I GRCGYC 2 cut(s) 48, 225
Hin1II CATG 6 cut(s) 40, 631, 686, 858, 974, 1106
Hin6I GCGC 3 cut(s) 48, 178, 335
HinP1I GCGC 3 cut(s) 48, 178, 335
HinfI GANTC 9 cut(s) 326, 371, 452, 467, 485, 589, 740, 773, 904
HpaII CCGG 2 cut(s) 616, 767
HphI GGTGA 8 cut(s) 177, 277, 648, 806, 847, 881, 913, 1052
Hpy166II GTNNAC 4 cut(s) 203, 489, 522, 1099
Hpy188I TCNGA 5 cut(s) 223, 331, 643, 710, 720
Hpy188III TCNNGA 3 cut(s) 133, 464, 971
Hpy8I GTNNAC 4 cut(s) 203, 489, 522, 1099
Hpy99I CGWCG 4 cut(s) 82, 227, 419, 475
HpyCH4III ACNGT 3 cut(s) 699, 920, 1142
HpyCH4IV ACGT 3 cut(s) 104, 197, 225
HpyCH4V TGCA 2 cut(s) 40, 882
HpyF10VI GCNNNNNNNGC 2 cut(s) 56, 320
HpyF3I CTNAG 3 cut(s) 10, 55, 492
HpySE526I ACGT 3 cut(s) 104, 197, 225
Hsp92I GRCGYC 2 cut(s) 48, 225
Hsp92II CATG 6 cut(s) 40, 631, 686, 858, 974, 1106
HspAI GCGC 3 cut(s) 48, 178, 335
KasI GGCGCC 1 cut(s) 47
Kzo9I GATC 3 cut(s) 552, 636, 1012
LmnI GCTCC 2 cut(s) 144, 813
Lsp1109I GCAGC 1 cut(s) 94
MaeI CTAG 1 cut(s) 357
MaeII ACGT 3 cut(s) 104, 197, 225
MaeIII GTNAC 5 cut(s) 654, 693, 784, 794, 901
MalI GATC 3 cut(s) 554, 638, 1014
MbiI CCGCTC 2 cut(s) 183, 1108
MboI GATC 3 cut(s) 552, 636, 1012
MboII GAAGA 5 cut(s) 241, 268, 899, 1042, 1091
MflI RGATCY 1 cut(s) 636
MluCI AATT 3 cut(s) 777, 824, 1147
Mly113I GGCGCC 1 cut(s) 48
MlyI GAGTC 7 cut(s) 335, 380, 461, 461, 494, 782, 898
MmeI TCCRAC 4 cut(s) 246, 304, 309, 331
MseI TTAA 5 cut(s) 503, 828, 1062, 1146, 1150
MslI CAYNNNNRTG 1 cut(s) 887
MspI CCGG 2 cut(s) 616, 767
MspR9I CCNGG 1 cut(s) 616
MwoI GCNNNNNNNGC 2 cut(s) 56, 320
NarI GGCGCC 1 cut(s) 48
NciI CCSGG 1 cut(s) 616
NdeII GATC 3 cut(s) 552, 636, 1012
NlaIII CATG 6 cut(s) 40, 631, 686, 858, 974, 1106
NlaIV GGNNCC 5 cut(s) 49, 115, 140, 362, 936
NmeAIII GCCGAG 4 cut(s) 249, 299, 349, 426
NmuCI GTSAC 3 cut(s) 654, 794, 901
NspI RCATGY 3 cut(s) 40, 686, 858
PacI TTAATTAA 1 cut(s) 1150
PaeR7I CTCGAG 1 cut(s) 133
PagI TCATGA 1 cut(s) 970
PcsI WCGNNNNNNNCGW 2 cut(s) 420, 447
PfeI GAWTC 2 cut(s) 589, 740
PflMI CCANNNNNTGG 2 cut(s) 390, 633
PkrI GCNGC 5 cut(s) 47, 84, 182, 765, 1110
PleI GAGTC 7 cut(s) 334, 379, 460, 461, 493, 781, 898
PluTI GGCGCC 1 cut(s) 51
PmaCI CACGTG 1 cut(s) 198
PmlI CACGTG 1 cut(s) 198
PpsI GAGTC 7 cut(s) 334, 379, 460, 461, 493, 781, 898
Ppu21I YACGTR 1 cut(s) 198
PpuMI RGGWCCY 1 cut(s) 935
Psp5II RGGWCCY 1 cut(s) 935
PspCI CACGTG 1 cut(s) 198
PspEI GGTNACC 1 cut(s) 784
PspFI CCCAGC 1 cut(s) 264
PspN4I GGNNCC 5 cut(s) 49, 115, 140, 362, 936
PspPI GGNCC 1 cut(s) 935
PspPPI RGGWCCY 1 cut(s) 935
PsuI RGATCY 1 cut(s) 636
RsaI GTAC 5 cut(s) 244, 701, 725, 922, 1100
RsaNI GTAC 5 cut(s) 243, 700, 724, 921, 1099
RseI CAYNNNNRTG 1 cut(s) 887
SaqAI TTAA 5 cut(s) 503, 828, 1062, 1146, 1150
SatI GCNGC 5 cut(s) 46, 83, 181, 764, 1109
Sau3AI GATC 3 cut(s) 552, 636, 1012
Sau96I GGNCC 1 cut(s) 935
ScaI AGTACT 1 cut(s) 725
SchI GAGTC 7 cut(s) 335, 380, 461, 461, 494, 782, 898
ScrFI CCNGG 1 cut(s) 616
SfcI CTRYAG 1 cut(s) 912
SfoI GGCGCC 1 cut(s) 49
Sfr274I CTCGAG 1 cut(s) 133
SinI GGWCC 1 cut(s) 935
SlaI CTCGAG 1 cut(s) 133
SmiMI CAYNNNNRTG 1 cut(s) 887
SmlI CTYRAG 3 cut(s) 133, 238, 804
SmoI CTYRAG 3 cut(s) 133, 238, 804
Sse9I AATT 3 cut(s) 777, 824, 1147
SspDI GGCGCC 1 cut(s) 47
SspMI CTAG 1 cut(s) 357
StyD4I CCNGG 1 cut(s) 614
StyI CCWWGG 2 cut(s) 356, 1128
TaaI ACNGT 3 cut(s) 699, 920, 1142
TaiI ACGT 3 cut(s) 107, 200, 228
TaqI TCGA 3 cut(s) 77, 134, 348
TasI AATT 3 cut(s) 777, 824, 1147
TatI WGTACW 1 cut(s) 723
TauI GCSGC 4 cut(s) 48, 183, 766, 1111
TfiI GAWTC 2 cut(s) 589, 740
Tru1I TTAA 5 cut(s) 503, 828, 1062, 1146, 1150
Tru9I TTAA 5 cut(s) 503, 828, 1062, 1146, 1150
TscAI CASTG 2 cut(s) 496, 855
TseFI GTSAC 3 cut(s) 654, 794, 901
TseI GCWGC 1 cut(s) 82
Tsp45I GTSAC 3 cut(s) 654, 794, 901
TspGWI ACGGA 3 cut(s) 199, 286, 450
TspRI CASTG 2 cut(s) 496, 855
Van91I CCANNNNNTGG 2 cut(s) 390, 633
VpaK11BI GGWCC 1 cut(s) 935
XapI RAATTY 1 cut(s) 824
XceI RCATGY 3 cut(s) 40, 686, 858
XcmI CCANNNNNNNNNTGG 1 cut(s) 710
XhoI CTCGAG 1 cut(s) 133
XmaJI CCTAGG 1 cut(s) 356
XspI CTAG 1 cut(s) 357
ZraI GACGTC 1 cut(s) 226
ZrmI AGTACT 1 cut(s) 725
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.