Prupe.4G179100_v2.0.a1

Werner Syndrome-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
10620214 .. 10621628
1415 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G179100.1

Sequence Viewer

Length: 642 bp
ATGGCTATCAGCATCACAGACTACGAATCCAATTGCGACACCCACGACCTCTACAGAGTAGATTTCTTCGATGACAATATCGAAACCCTAGTCACGCACACTCCGTCCAAGGTGAGGTCTTGGATCCAGAAAATCAAATACGTACACCGTTTCAGGCTCCAAGAACTCATCGTCGGCCTCGACGTTGAGTGGCGACCATCCTTCACCCAAGGCGTCACCAACCCTGTAGCAACCCTGCAACTATGCGTCGGCCACAATTGCCTCATTTTTCAGCTCTGCTACTGCGATCGGATCCCCAAGTGCCTTTTCGACTTTCTTGCGAACCCGAGCTTTACCTTTGTGGGCGTCGGGGTAGGGGAAGATGTTCGAAAGCTGGCGGATGATTATGGCCTGGAGGTAGCGAATTCTGTGGATCTTAGGGTTTTGGAGGCGAGGCACTACGGGCGGGACCGGCCCCGGAGCGTGAGCCTGAAGGACCTGGCATCGGAGGTTCTAGGGCAGGAGTTTCAGAAGCCGAAGAGTATTACTTTGAGTCACTGGGACAAGCCATACCTCTCCCCCGCGCAAGTCAAGTACGCTTGTGTTGATGCCTTTGTTTCTTTCGAAATTGGCAAGGTCTTGATCGCAGCAGAGGAGGACTAA

Protein Analysis

214

Amino Acids

24.27

Weight (kDa)

5.37

Isoelectric Point (pI)

33.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 563
AciI CCGC 3 cut(s) 377, 445, 561
AclWI GGATC 5 cut(s) 118, 131, 286, 299, 420
AcoI YGGCCR 1 cut(s) 250
AcsI RAATTY 1 cut(s) 403
AcuI CTGAAG 1 cut(s) 491
AcyI GRCGYC 2 cut(s) 213, 345
AfaI GTAC 2 cut(s) 144, 575
AfiI CCNNNNNNNGG 2 cut(s) 114, 484
AjnI CCWGG 2 cut(s) 390, 477
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
AluBI AGCT 3 cut(s) 274, 330, 373
AluI AGCT 3 cut(s) 274, 330, 373
AlwI GGATC 5 cut(s) 118, 131, 286, 299, 420
Ama87I CYCGRG 1 cut(s) 325
AoxI GGCC 4 cut(s) 175, 250, 388, 452
ApeKI GCWGC 1 cut(s) 626
ApoI RAATTY 1 cut(s) 403
ArsI GACNNNNNNTTYG 2 cut(s) 75, 107
Asp700I GAANNNNTTC 1 cut(s) 363
AspLEI GCGC 1 cut(s) 565
AspS9I GGNCC 3 cut(s) 448, 453, 475
AsuC2I CCSGG 1 cut(s) 457
AsuHPI GGTGA 3 cut(s) 124, 196, 208
AsuII TTCGAA 2 cut(s) 367, 603
AvaI CYCGRG 1 cut(s) 325
AvaII GGWCC 2 cut(s) 448, 475
BamHI GGATCC 2 cut(s) 123, 291
BbvI GCAGC 1 cut(s) 638
BccI CCATC 1 cut(s) 205
BcgI CGANNNNNNTGC 2 cut(s) 299, 333
BciT130I CCWGG 2 cut(s) 392, 479
BcnI CCSGG 1 cut(s) 457
BfaI CTAG 2 cut(s) 89, 494
BfmI CTRYAG 2 cut(s) 52, 225
BisI GCNGC 1 cut(s) 627
BlsI GCNGC 1 cut(s) 628
Bme1390I CCNGG 3 cut(s) 392, 457, 479
Bme18I GGWCC 2 cut(s) 448, 475
BmeT110I CYCGRG 1 cut(s) 325
BmgT120I GGNCC 3 cut(s) 448, 453, 475
BmiI GGNNCC 5 cut(s) 125, 158, 293, 449, 455
BmrFI CCNGG 3 cut(s) 392, 457, 479
BmrI ACTGGG 1 cut(s) 547
BmsI GCATC 3 cut(s) 21, 491, 577
BmuI ACTGGG 1 cut(s) 547
BpmI CTGGAG 1 cut(s) 413
Bpu14I TTCGAA 2 cut(s) 367, 603
BpuMI CCSGG 1 cut(s) 457
BsaAI YACGTR 1 cut(s) 142
BsaHI GRCGYC 2 cut(s) 213, 345
BsaJI CCNNGG 3 cut(s) 108, 208, 455
BsaXI ACNNNNNCTCC 2 cut(s) 85, 115
Bsc4I CCNNNNNNNGG 2 cut(s) 114, 484
Bse118I RCCGGY 1 cut(s) 450
Bse1I ACTGG 1 cut(s) 542
BseBI CCWGG 2 cut(s) 392, 479
BseDI CCNNGG 3 cut(s) 108, 208, 455
BseGI GGATG 2 cut(s) 197, 385
BseLI CCNNNNNNNGG 2 cut(s) 114, 484
BseNI ACTGG 1 cut(s) 542
BseXI GCAGC 1 cut(s) 638
Bsh1236I CGCG 1 cut(s) 563
Bsh1285I CGRYCG 1 cut(s) 289
BshFI GGCC 4 cut(s) 177, 252, 390, 454
BsiEI CGRYCG 1 cut(s) 289
BsiHKCI CYCGRG 1 cut(s) 325
BsiSI CCGG 2 cut(s) 451, 457
BslFI GGGAC 2 cut(s) 461, 554
BslI CCNNNNNNNGG 2 cut(s) 114, 484
BsmFI GGGAC 2 cut(s) 461, 554
BsnI GGCC 4 cut(s) 177, 252, 390, 454
BsoBI CYCGRG 1 cut(s) 325
Bsp119I TTCGAA 2 cut(s) 367, 603
Bsp143I GATC 5 cut(s) 123, 286, 291, 412, 621
BspACI CCGC 3 cut(s) 377, 445, 561
BspANI GGCC 4 cut(s) 177, 252, 390, 454
BspFNI CGCG 1 cut(s) 563
BspLI GGNNCC 5 cut(s) 125, 158, 293, 449, 455
BspPI GGATC 5 cut(s) 118, 131, 286, 299, 420
BspT104I TTCGAA 2 cut(s) 367, 603
BsrFI RCCGGY 1 cut(s) 450
BsrI ACTGG 1 cut(s) 542
BssAI RCCGGY 1 cut(s) 450
BssECI CCNNGG 3 cut(s) 108, 208, 455
BssMI GATC 5 cut(s) 123, 286, 291, 412, 621
BssNI GRCGYC 2 cut(s) 213, 345
BssT1I CCWWGG 2 cut(s) 108, 208
Bst2UI CCWGG 2 cut(s) 392, 479
Bst4CI ACNGT 1 cut(s) 149
Bst6I CTCTTC 1 cut(s) 512
BstACI GRCGYC 2 cut(s) 213, 345
BstBAI YACGTR 1 cut(s) 142
BstBI TTCGAA 2 cut(s) 367, 603
BstC8I GCNNGC 1 cut(s) 375
BstDEI CTNAG 1 cut(s) 416
BstF5I GGATG 2 cut(s) 197, 385
BstFNI CGCG 1 cut(s) 563
BstHHI GCGC 1 cut(s) 565
BstKTI GATC 5 cut(s) 126, 289, 294, 415, 624
BstMBI GATC 5 cut(s) 123, 286, 291, 412, 621
BstMCI CGRYCG 1 cut(s) 289
BstMWI GCNNNNNNNGC 3 cut(s) 258, 442, 451
BstNI CCWGG 2 cut(s) 392, 479
BstSCI CCNGG 3 cut(s) 390, 455, 477
BstSFI CTRYAG 2 cut(s) 52, 225
BstSNI TACGTA 1 cut(s) 142
BstUI CGCG 1 cut(s) 563
BstV1I GCAGC 1 cut(s) 638
BstX2I RGATCY 3 cut(s) 123, 291, 412
BstYI RGATCY 3 cut(s) 123, 291, 412
BsuRI GGCC 4 cut(s) 177, 252, 390, 454
BtsCI GGATG 2 cut(s) 197, 385
BtsIMutI CAGTG 1 cut(s) 535
Cac8I GCNNGC 1 cut(s) 375
CfoI GCGC 1 cut(s) 565
Cfr10I RCCGGY 1 cut(s) 450
Cfr13I GGNCC 3 cut(s) 448, 453, 475
CseI GACGC 3 cut(s) 202, 235, 334
Csp6I GTAC 2 cut(s) 143, 574
CviQI GTAC 2 cut(s) 143, 574
DdeI CTNAG 1 cut(s) 416
DpnI GATC 5 cut(s) 125, 288, 293, 414, 623
DpnII GATC 5 cut(s) 123, 286, 291, 412, 621
EaeI YGGCCR 1 cut(s) 250
Eam1104I CTCTTC 1 cut(s) 512
EarI CTCTTC 1 cut(s) 512
EciI GGCGGA 1 cut(s) 392
Eco105I TACGTA 1 cut(s) 142
Eco130I CCWWGG 2 cut(s) 108, 208
Eco47I GGWCC 2 cut(s) 448, 475
Eco57I CTGAAG 1 cut(s) 491
Eco88I CYCGRG 1 cut(s) 325
EcoO109I RGGNCCY 1 cut(s) 475
EcoRI GAATTC 1 cut(s) 403
EcoRII CCWGG 2 cut(s) 390, 477
EcoT14I CCWWGG 2 cut(s) 108, 208
ErhI CCWWGG 2 cut(s) 108, 208
FaiI YATR 3 cut(s) 244, 387, 550
FaqI GGGAC 2 cut(s) 461, 554
FauI CCCGC 2 cut(s) 438, 568
Fnu4HI GCNGC 1 cut(s) 627
FokI GGATG 2 cut(s) 184, 392
Fsp4HI GCNGC 1 cut(s) 627
FspBI CTAG 2 cut(s) 89, 494
GlaI GCGC 1 cut(s) 564
GluI GCNGC 1 cut(s) 627
GsuI CTGGAG 1 cut(s) 413
HaeIII GGCC 4 cut(s) 177, 252, 390, 454
HapII CCGG 2 cut(s) 451, 457
HgaI GACGC 3 cut(s) 202, 235, 334
HhaI GCGC 1 cut(s) 565
Hin1I GRCGYC 2 cut(s) 213, 345
Hin6I GCGC 1 cut(s) 563
HinP1I GCGC 1 cut(s) 563
HinfI GANTC 2 cut(s) 26, 532
HpaII CCGG 2 cut(s) 451, 457
HphI GGTGA 3 cut(s) 124, 196, 208
Hpy166II GTNNAC 1 cut(s) 145
Hpy188I TCNGA 3 cut(s) 291, 487, 510
Hpy188III TCNNGA 2 cut(s) 127, 619
Hpy8I GTNNAC 1 cut(s) 145
Hpy99I CGWCG 4 cut(s) 176, 185, 251, 350
HpyAV CCTTC 2 cut(s) 211, 466
HpyCH4III ACNGT 1 cut(s) 149
HpyCH4IV ACGT 2 cut(s) 141, 183
HpyCH4V TGCA 1 cut(s) 238
HpyF10VI GCNNNNNNNGC 3 cut(s) 258, 442, 451
HpyF3I CTNAG 1 cut(s) 416
HpySE526I ACGT 2 cut(s) 141, 183
Hsp92I GRCGYC 2 cut(s) 213, 345
HspAI GCGC 1 cut(s) 563
Kzo9I GATC 5 cut(s) 123, 286, 291, 412, 621
LmnI GCTCC 2 cut(s) 162, 459
Lsp1109I GCAGC 1 cut(s) 638
LweI GCATC 3 cut(s) 21, 491, 577
MaeI CTAG 2 cut(s) 89, 494
MaeII ACGT 2 cut(s) 141, 183
MaeIII GTNAC 3 cut(s) 91, 214, 533
MalI GATC 5 cut(s) 125, 288, 293, 414, 623
MboI GATC 5 cut(s) 123, 286, 291, 412, 621
MboII GAAGA 3 cut(s) 58, 371, 529
MfeI CAATTG 2 cut(s) 31, 256
MflI RGATCY 3 cut(s) 123, 291, 412
MluCI AATT 4 cut(s) 31, 256, 403, 606
MlyI GAGTC 1 cut(s) 541
MroXI GAANNNNTTC 1 cut(s) 363
MspI CCGG 2 cut(s) 451, 457
MspR9I CCNGG 3 cut(s) 392, 457, 479
MunI CAATTG 2 cut(s) 31, 256
MvaI CCWGG 2 cut(s) 392, 479
MvnI CGCG 1 cut(s) 563
MwoI GCNNNNNNNGC 3 cut(s) 258, 442, 451
NciI CCSGG 1 cut(s) 457
NdeII GATC 5 cut(s) 123, 286, 291, 412, 621
NlaIV GGNNCC 5 cut(s) 125, 158, 293, 449, 455
NmuCI GTSAC 3 cut(s) 91, 214, 533
NspV TTCGAA 2 cut(s) 367, 603
PcsI WCGNNNNNNNCGW 3 cut(s) 101, 177, 180
PdmI GAANNNNTTC 1 cut(s) 363
PfeI GAWTC 1 cut(s) 26
PkrI GCNGC 1 cut(s) 628
Ple19I CGATCG 1 cut(s) 289
PleI GAGTC 1 cut(s) 540
PpsI GAGTC 1 cut(s) 540
Ppu21I YACGTR 1 cut(s) 142
PpuMI RGGWCCY 1 cut(s) 475
Psp5II RGGWCCY 1 cut(s) 475
Psp6I CCWGG 2 cut(s) 390, 477
PspGI CCWGG 2 cut(s) 390, 477
PspN4I GGNNCC 5 cut(s) 125, 158, 293, 449, 455
PspPI GGNCC 3 cut(s) 448, 453, 475
PspPPI RGGWCCY 1 cut(s) 475
PsuI RGATCY 3 cut(s) 123, 291, 412
PvuI CGATCG 1 cut(s) 289
RsaI GTAC 2 cut(s) 144, 575
RsaNI GTAC 2 cut(s) 143, 574
SatI GCNGC 1 cut(s) 627
Sau3AI GATC 5 cut(s) 123, 286, 291, 412, 621
Sau96I GGNCC 3 cut(s) 448, 453, 475
SchI GAGTC 1 cut(s) 541
ScrFI CCNGG 3 cut(s) 392, 457, 479
SfaNI GCATC 3 cut(s) 21, 491, 577
SfcI CTRYAG 2 cut(s) 52, 225
SfuI TTCGAA 2 cut(s) 367, 603
SinI GGWCC 2 cut(s) 448, 475
SnaBI TACGTA 1 cut(s) 142
Sse9I AATT 4 cut(s) 31, 256, 403, 606
SsiI CCGC 3 cut(s) 377, 445, 561
SspMI CTAG 2 cut(s) 89, 494
StyD4I CCNGG 3 cut(s) 390, 455, 477
StyI CCWWGG 2 cut(s) 108, 208
TaaI ACNGT 1 cut(s) 149
TaiI ACGT 2 cut(s) 144, 186
TaqI TCGA 6 cut(s) 69, 81, 180, 309, 367, 603
TasI AATT 4 cut(s) 31, 256, 403, 606
TfiI GAWTC 1 cut(s) 26
TscAI CASTG 1 cut(s) 542
TseFI GTSAC 3 cut(s) 91, 214, 533
TseI GCWGC 1 cut(s) 626
Tsp45I GTSAC 3 cut(s) 91, 214, 533
TspGWI ACGGA 1 cut(s) 93
TspRI CASTG 1 cut(s) 542
VpaK11BI GGWCC 2 cut(s) 448, 475
XapI RAATTY 1 cut(s) 403
XmnI GAANNNNTTC 1 cut(s) 363
XspI CTAG 2 cut(s) 89, 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.