Rh2AG080000

Werner Syndrome-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
6658007 .. 6658444
438 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG080000.1

Sequence Viewer

Length: 438 bp
ATGGAGAAGGATAAGAAAATTACAATGAGTCTTTGGGGTAATGAACGACTCAATCGCCTTCAAGTGGAGTATGCTTGCATAGATGCTTTTGTTTCGTTTCAACTAGGAGTGCAATTACAAATGCCCTACTCAAGTGAAGAGAGAATGAAATGCATCGCCGAGACAAAGAACTTTTGCATTAATGCATATTCATCAAGAAATTCCAACCGGAAGAAGTATCACATTATCAAAGAGGAAATAGCTGATATTGGCGATCATAGTAAGATTGTACCAACGGGTTGGTTCATCGAAGAAGAAGCGATTGATGTTGGGGATTACACCAAGATTGTACCAACAGGTTGGTTCATAGAAGAGGAAGCAATTGATATGGGCGACTACAACATTGTACCAACGTGCTGGGTTGAAGAGGAAGCGATTGATGTTGGGGATTACAGCTAA

Protein Analysis

145

Amino Acids

16.78

Weight (kDa)

4.55

Isoelectric Point (pI)

60.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 199
AfaI GTAC 3 cut(s) 270, 330, 387
AfiI CCNNNNNNNGG 1 cut(s) 64
AgsI TTSAA 3 cut(s) 62, 101, 404
AluBI AGCT 2 cut(s) 242, 435
AluI AGCT 2 cut(s) 242, 435
Alw26I GTCTC 1 cut(s) 155
ApoI RAATTY 1 cut(s) 199
AseI ATTAAT 1 cut(s) 180
BcoDI GTCTC 1 cut(s) 155
BfaI CTAG 1 cut(s) 104
BmsI GCATC 2 cut(s) 73, 162
BpuEI CTTGAG 1 cut(s) 115
BsaWI WCCGGW 1 cut(s) 207
Bsc4I CCNNNNNNNGG 1 cut(s) 64
BseLI CCNNNNNNNGG 1 cut(s) 64
BseYI CCCAGC 1 cut(s) 396
BsiSI CCGG 1 cut(s) 208
BslI CCNNNNNNNGG 1 cut(s) 64
BsmAI GTCTC 1 cut(s) 155
Bsp143I GATC 1 cut(s) 253
BssMI GATC 1 cut(s) 253
Bst6I CTCTTC 3 cut(s) 132, 345, 399
BstC8I GCNNGC 1 cut(s) 76
BstKTI GATC 1 cut(s) 256
BstMAI GTCTC 1 cut(s) 155
BstMBI GATC 1 cut(s) 253
BstXI CCANNNNNNTGG 3 cut(s) 279, 339, 396
BtgZI GCGATG 1 cut(s) 139
Cac8I GCNNGC 1 cut(s) 76
Csp6I GTAC 3 cut(s) 269, 329, 386
CviJI RGCY 2 cut(s) 242, 435
CviKI_1 RGCY 2 cut(s) 242, 435
CviQI GTAC 3 cut(s) 269, 329, 386
DpnI GATC 1 cut(s) 255
DpnII GATC 1 cut(s) 253
Eam1104I CTCTTC 3 cut(s) 132, 345, 399
EarI CTCTTC 3 cut(s) 132, 345, 399
EcoT22I ATGCAT 2 cut(s) 155, 187
FaiI YATR 6 cut(s) 72, 80, 187, 258, 347, 368
FspBI CTAG 1 cut(s) 104
GsaI CCCAGC 1 cut(s) 400
HapII CCGG 1 cut(s) 208
HinfI GANTC 2 cut(s) 28, 48
HpaII CCGG 1 cut(s) 208
Hpy188III TCNNGA 1 cut(s) 195
HpyAV CCTTC 1 cut(s) 68
HpyCH4IV ACGT 1 cut(s) 392
HpyCH4V TGCA 5 cut(s) 78, 112, 153, 177, 185
HpySE526I ACGT 1 cut(s) 392
Kzo9I GATC 1 cut(s) 253
LpnPI CCDG 3 cut(s) 221, 321, 382
LweI GCATC 2 cut(s) 73, 162
MaeI CTAG 1 cut(s) 104
MaeII ACGT 1 cut(s) 392
MalI GATC 1 cut(s) 255
MboI GATC 1 cut(s) 253
MboII GAAGA 6 cut(s) 149, 223, 302, 305, 362, 416
MfeI CAATTG 1 cut(s) 360
MluCI AATT 4 cut(s) 18, 113, 199, 360
MlyI GAGTC 2 cut(s) 37, 42
MmeI TCCRAC 1 cut(s) 228
MnlI CCTC 3 cut(s) 226, 346, 400
Mph1103I ATGCAT 2 cut(s) 155, 187
MseI TTAA 1 cut(s) 180
MspI CCGG 1 cut(s) 208
MunI CAATTG 1 cut(s) 360
NdeII GATC 1 cut(s) 253
NmeAIII GCCGAG 1 cut(s) 184
NsiI ATGCAT 2 cut(s) 155, 187
PleI GAGTC 2 cut(s) 36, 42
PpsI GAGTC 2 cut(s) 36, 42
PshBI ATTAAT 1 cut(s) 180
PspFI CCCAGC 1 cut(s) 396
RsaI GTAC 3 cut(s) 270, 330, 387
RsaNI GTAC 3 cut(s) 269, 329, 386
SaqAI TTAA 1 cut(s) 180
Sau3AI GATC 1 cut(s) 253
SchI GAGTC 2 cut(s) 37, 42
SetI ASST 4 cut(s) 244, 340, 395, 437
SfaNI GCATC 2 cut(s) 73, 162
SmlI CTYRAG 1 cut(s) 130
SmoI CTYRAG 1 cut(s) 130
Sse9I AATT 4 cut(s) 18, 113, 199, 360
SspMI CTAG 1 cut(s) 104
TaiI ACGT 1 cut(s) 395
TaqI TCGA 1 cut(s) 288
TasI AATT 4 cut(s) 18, 113, 199, 360
Tru1I TTAA 1 cut(s) 180
Tru9I TTAA 1 cut(s) 180
TspDTI ATGAA 5 cut(s) 57, 161, 180, 274, 334
VspI ATTAAT 1 cut(s) 180
XapI RAATTY 1 cut(s) 199
XspI CTAG 1 cut(s) 104
Zsp2I ATGCAT 2 cut(s) 155, 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.