Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0004191

Physical Location & Seq

Genomic Coordinates Reverse (-)

10273121 .. 10280803

Gene Structure 7683 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G092400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGAGAACCCAAACGCCAAAATTAGGGCACAAGACCCTCCTCTTCCTTCTGTGCTTCATCGGGTTTCTCACTCCACACGACGTCGTCGCAGTTCAGATTCTTTCCAAATCGAAGCTCGAGAAGTGCGAGAAGACTTCCGATTCCGGAAACTTGAATTGCACCAAGAAGATCGTCCTCAACATGGCCATTCCTAGTGGCACGAGCGGCGGAGAGGCATCAATTGTTGCCGAAATCGTAGAGGTGGAAGAGAATTCAAGCCAAAAGATGCAAAATTTTCGAATTCCCCCTGTTCTGACCGTCAACAAGTCCGCGGCTTATGCATTGTATGAGCTTACGTACATACGAGATGTTGCCTTTAAACCGGAAGAGTACTATGTTAAGACCCGCAAATGTGAGCGAGATGCAGATGCAAAAGTTGTGAAGATATGTGAGAGGTTACGGGATGAAAACGATCACATTATTGAGCACACTGAGCCAATCTGCTGTCCTTGTGGGCCTCAGCGGCGGGTACCTTCATCATGTGGAAATGTGTTTGATAAGTTGATGAAGGGAAAAGCGAATACTGCCCATTGTGTCCGTTTTCCGGGTGATTGGTTCCATGTTTTTGGTATTGGACAGCGGTCAGTGGGATTCAGTGTTCTAGTTCAGGTGAAGACAGGATCTAAAGTTTCGGAAGTGCTTGTTGGTCCTGAGAATAGAACAGCGATATCCAATGATAATTTTGTACGAGTTAATCTTATTGGAGATTTTGTTGGATACACAAATATACCATCATTCGAGGATTTCTACCTTGTAATTCCGAGGCAGGGGGGTCCTGGTCAACCCCAGAACTTGGGGAGGAACCTTTCTATGTGGATGCTGCTAGAGAGAGTAAGGTTTTCTTTAGATGGTGTTGAATGTAATAAAATTGGTGTCAGTTATGAGGCTTTCAATGGGCAGCCAAACTTTTGCTCTTCACCATTCTGGAGTTGCTTGCATAATCAATTATGGAATTTCTGGGAGGCTGACCAGAACCGAATTGAAAGGAATCAGTTGCCACTTTATGGTGTGGAAGGAAGGTTTGAAAGGATAAACCAGCATCCAAATGCAGGAACTCATTCGTTTTCCATAGGAGTCACTGAAGTTATTAATACTAATCTCTTGATAGAACTAAGTGCTGATGACGTAGAATATGTCTACCAAAGGAGTCCTGGGAAAATCTTAAGTATCAATGTCCCAATGTTTGAGGCCCTTACTCAATTTGGAACTGCGACAATCACAACAACGAATACTGGTGAAGTGGAAGCATCATATAGTTTAACGTTTGATTGCTCTAGTGATGTCACCCTCATGGAGGAACAATTCCTTATTATGAAGCCAAAAGAAACAACAACGCGAGCCTTCAAACTTTACCCAGCAACTGATCAAGCTGCAAAATATGTTTGTGCAGCTATACTAAAGGACTCTGATTATAAAGAAGTAGATAGAGCCGAGTGCCAATTTTCTACAACATCTACTGTCCTTGATAATGGATCACAGGGTAATCCTTTTAATCCACCAAAGACAGGCACAACCGGTTTCTTTGACTCTGTTGAAAGCATTTGGAACAATCTGTGGAATATTTTGGTAGATTTCGTCACTGGAAAAACTTGCAGAAGGAAATGCCCCAGGTTCTTTGACTTCCGGTGCCACATACAGTATATATGTATGAGTTGGATTGTGATGTTTGGTCTACTTTTGGCAATTTTTCCAACAGTGGTTGTGCTACTGTGGCTTCTACATCAAAAGGGACTTTTTGATCCTTTATATGATTGGTGGGAAGATCATTTTTGGGATAATAATCAGCACACCAAGGATATTCGGAAGCACAGAAGTGACGTAGAACACTTGCACACTCATGTTCATAAACATCATGGGCATGAAGCAAGGAACCACAAGCATGGTTCTCATCATAAGCGAAGAAACATTCACAATGATCACAGGCGTAACCAGTTTGAAAGAGGCAGCGATTATTACTACCATCTCCACCACGTCCACAAAGACAAGCCCAAGCATGGGAGAAGAAAGCATTCAAGTATTATGCAGAAAGTTGATGAAAATACCGGATACCACAGCCATAAAAATGAAAGGAGACTAACCAAAGATTATTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005887 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009566 GO:0009567 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0045026 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051704 GO:0055046 GO:0061024 GO:0061025 GO:0061936 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAP2-GCS1

Protein Analysis

711

Amino Acids

81.46

Weight (kDa)

8.14

Isoelectric Point (pI)

37.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11720
fragaria_vesca	FvH4_5g01650 FvH4_5g28890
malus_domestica	MD04G1066100.v1.1
prunus_persica	Prupe.5G092400_v2.0.a1 Prupe.5G092400_v2.0.a1 Prupe.8G039400_v2.0.a1 Prupe.8G039500_v2.0.a1 Prupe.8G039500_v2.0.a1
pyrus_communis	pycom04g05950
rosa_chinensis	RchiOBHm_Chr4g0410761 RchiOBHm_Chr7g0199071
rosa_laevigata	RLG00000003818 RLG00000008399
rosa_multiflora	Rmu_sc0009499.1_g000004 Rmu_sc0021158.1_g000001
rosa_roxburghii	Rroxscaffold_3G00257150 Rroxscaffold_5G00355510
rosa_rugosa	Rorug04G0111100 Rorug04G0111200 Rorug07G0052400 Rorug07G0052500
rosa_samantha	Rh4AG162900 Rh4BG161700 Rh4BG162100 Rh4CG175700 Rh4DG158600 Rh7AG175800 Rh7BG179000 Rh7CG184900 Rh7DG178600
rosa_wichuraiana	Rw4G013580 Rw7G015420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1452
AatII	GACGTC	1 cut(s)	84
Acc65I	GGTACC	1 cut(s)	508
AccB1I	GGYRCC	2 cut(s)	508, 1665
AccB7I	CCANNNNNTGG	2 cut(s)	832, 1043
AccBSI	CCGCTC	1 cut(s)	204
AccI	GTMKAC	2 cut(s)	1176, 1711
AccII	CGCG	2 cut(s)	311, 1375
AccIII	TCCGGA	1 cut(s)	143
AciI	CCGC	8 cut(s)	204, 207, 309, 311, 385, 502, 505, 619
AclI	AACGTT	1 cut(s)	1301
AclWI	GGATC	3 cut(s)	667, 1519, 1772
AcoI	YGGCCR	1 cut(s)	183
AcsI	RAATTY	4 cut(s)	250, 271, 279, 991
AcuI	CTGAAG	1 cut(s)	1140
AcyI	GRCGYC	1 cut(s)	81
AfaI	GTAC	4 cut(s)	338, 371, 510, 726
AflII	CTTAAG	1 cut(s)	1201
AgeI	ACCGGT	1 cut(s)	1553
AjiI	CACGTC	1 cut(s)	2011
AjnI	CCWGG	3 cut(s)	814, 1189, 1646
AjuI	GAANNNNNNNTTGG	2 cut(s)	666, 698
AleI	CACNNNNGTG	1 cut(s)	1851
AloI	GAACNNNNNNTCC	2 cut(s)	621, 653
AluBI	AGCT	4 cut(s)	115, 331, 1409, 1430
AluI	AGCT	4 cut(s)	115, 331, 1409, 1430
Alw21I	GWGCWC	1 cut(s)	468
Alw26I	GTCTC	1 cut(s)	2104
AlwI	GGATC	3 cut(s)	667, 1519, 1772
AlwNI	CAGNNNCTG	1 cut(s)	1400
Ama87I	CYCGRG	1 cut(s)	116
Aor13HI	TCCGGA	1 cut(s)	143
AoxI	GGCC	3 cut(s)	183, 494, 1227
ApeKI	GCWGC	5 cut(s)	859, 937, 1409, 1427, 1983
ApoI	RAATTY	4 cut(s)	250, 271, 279, 991
AseI	ATTAAT	1 cut(s)	1128
AsiGI	ACCGGT	1 cut(s)	1553
Asp700I	GAANNNNTTC	2 cut(s)	1096, 2047
Asp718I	GGTACC	1 cut(s)	508
AspS9I	GGNCC	4 cut(s)	494, 686, 812, 1228
AsuC2I	CCSGG	1 cut(s)	585
AsuHPI	GGTGA	5 cut(s)	599, 661, 948, 1286, 1315
AsuII	TTCGAA	1 cut(s)	277
AvaI	CYCGRG	1 cut(s)	116
AvaII	GGWCC	2 cut(s)	686, 812
BaeGI	GKGCMC	1 cut(s)	30
BalI	TGGCCA	1 cut(s)	185
BanI	GGYRCC	2 cut(s)	508, 1665
BauI	CACGAG	1 cut(s)	199
BbsI	GAAGAC	2 cut(s)	137, 659
Bbv12I	GWGCWC	1 cut(s)	468
BbvCI	CCTCAGC	1 cut(s)	498
BbvI	GCAGC	5 cut(s)	846, 949, 1396, 1439, 1995
BccI	CCATC	3 cut(s)	778, 881, 2007
BcgI	CGANNNNNNTGC	2 cut(s)	257, 291
BciT130I	CCWGG	3 cut(s)	816, 1191, 1648
BciVI	GTATCC	2 cut(s)	749, 2078
BclI	TGATCA	2 cut(s)	1402, 1954
BcnI	CCSGG	1 cut(s)	585
BcoDI	GTCTC	1 cut(s)	2104
BfaI	CTAG	4 cut(s)	192, 641, 863, 1314
BfrI	CTTAAG	1 cut(s)	1201
BfuI	GTATCC	2 cut(s)	749, 2078
BglI	GCCNNNNNGGC	1 cut(s)	502
BisI	GCNGC	8 cut(s)	205, 312, 503, 860, 938, 1410, 1428, 1984
BlsI	GCNGC	8 cut(s)	206, 313, 504, 861, 939, 1411, 1429, 1985
BmcAI	AGTACT	1 cut(s)	371
Bme1390I	CCNGG	4 cut(s)	585, 816, 1191, 1648
Bme18I	GGWCC	2 cut(s)	686, 812
BmeT110I	CYCGRG	1 cut(s)	116
BmgBI	CACGTC	1 cut(s)	2011
BmgT120I	GGNCC	4 cut(s)	494, 686, 812, 1228
BmiI	GGNNCC	6 cut(s)	510, 596, 813, 842, 1667, 1910
BmrFI	CCNGG	4 cut(s)	585, 816, 1191, 1648
BmsI	GCATC	7 cut(s)	224, 255, 391, 397, 846, 1087, 1295
BoxI	GACNNNNGTC	1 cut(s)	619
BpiI	GAAGAC	2 cut(s)	137, 659
BpmI	CTGGAG	1 cut(s)	985
Bpu10I	CCTNAGC	1 cut(s)	498
Bpu14I	TTCGAA	1 cut(s)	277
BpuMI	CCSGG	1 cut(s)	585
BsaAI	YACGTR	1 cut(s)	336
BsaBI	GATNNNNATC	1 cut(s)	1818
BsaHI	GRCGYC	1 cut(s)	81
BsaJI	CCNNGG	5 cut(s)	309, 800, 1190, 1646, 1830
BsaWI	WCCGGW	5 cut(s)	143, 361, 1553, 1662, 2081
BsaXI	ACNNNNNCTCC	2 cut(s)	735, 765
Bse118I	RCCGGY	1 cut(s)	1553
Bse1I	ACTGG	3 cut(s)	1276, 1624, 1969
Bse8I	GATNNNNATC	1 cut(s)	1818
BseAI	TCCGGA	1 cut(s)	143
BseBI	CCWGG	3 cut(s)	816, 1191, 1648
BseDI	CCNNGG	5 cut(s)	309, 800, 1190, 1646, 1830
BseGI	GGATG	3 cut(s)	448, 861, 1078
BseJI	GATNNNNATC	1 cut(s)	1818
BseMII	CTCAG	3 cut(s)	462, 512, 681
BseNI	ACTGG	3 cut(s)	1276, 1624, 1969
BseRI	GAGGAG	1 cut(s)	29
BseSI	GKGCMC	1 cut(s)	30
BseXI	GCAGC	5 cut(s)	846, 949, 1396, 1439, 1995
BseYI	CCCAGC	1 cut(s)	1393
BsgI	GTGCAG	1 cut(s)	1446
Bsh1236I	CGCG	2 cut(s)	311, 1375
BshFI	GGCC	3 cut(s)	185, 496, 1229
BshNI	GGYRCC	2 cut(s)	508, 1665
BshTI	ACCGGT	1 cut(s)	1553
BsiHKAI	GWGCWC	1 cut(s)	468
BsiHKCI	CYCGRG	1 cut(s)	116
BsiSI	CCGG	6 cut(s)	144, 362, 584, 1554, 1663, 2082
BslFI	GGGAC	2 cut(s)	1199, 1782
BsmAI	GTCTC	1 cut(s)	2104
BsmFI	GGGAC	2 cut(s)	1199, 1782
BsmI	GAATGC	1 cut(s)	2047
BsnI	GGCC	3 cut(s)	185, 496, 1229
BsoBI	CYCGRG	1 cut(s)	116
Bsp119I	TTCGAA	1 cut(s)	277
Bsp1286I	GDGCHC	2 cut(s)	30, 468
Bsp13I	TCCGGA	1 cut(s)	143
Bsp143I	GATC	8 cut(s)	168, 451, 659, 1402, 1511, 1777, 1801, 1954
BspACI	CCGC	8 cut(s)	204, 207, 309, 311, 385, 502, 505, 619
BspANI	GGCC	3 cut(s)	185, 496, 1229
BspCNI	CTCAG	3 cut(s)	463, 511, 682
BspEI	TCCGGA	1 cut(s)	143
BspFNI	CGCG	2 cut(s)	311, 1375
BspLI	GGNNCC	6 cut(s)	510, 596, 813, 842, 1667, 1910
BspPI	GGATC	3 cut(s)	667, 1519, 1772
BspQI	GCTCTTC	1 cut(s)	958
BspT104I	TTCGAA	1 cut(s)	277
BspT107I	GGYRCC	2 cut(s)	508, 1665
BspTI	CTTAAG	1 cut(s)	1201
BsrBI	CCGCTC	1 cut(s)	204
BsrFI	RCCGGY	1 cut(s)	1553
BsrI	ACTGG	3 cut(s)	1276, 1624, 1969
BssAI	RCCGGY	1 cut(s)	1553
BssECI	CCNNGG	5 cut(s)	309, 800, 1190, 1646, 1830
BssMI	GATC	8 cut(s)	168, 451, 659, 1402, 1511, 1777, 1801, 1954
BssNI	GRCGYC	1 cut(s)	81
BssSI	CACGAG	1 cut(s)	199
BssT1I	CCWWGG	1 cut(s)	1830
Bst2BI	CACGAG	1 cut(s)	199
Bst2UI	CCWGG	3 cut(s)	816, 1191, 1648
Bst4CI	ACNGT	5 cut(s)	298, 1498, 1677, 1735, 1749
Bst6I	CTCTTC	4 cut(s)	47, 240, 360, 958
BstACI	GRCGYC	1 cut(s)	81
BstAFI	CTTAAG	1 cut(s)	1201
BstBAI	YACGTR	1 cut(s)	336
BstBI	TTCGAA	1 cut(s)	277
BstC8I	GCNNGC	2 cut(s)	974, 1377
BstDEI	CTNAG	4 cut(s)	471, 498, 690, 1151
BstDSI	CCRYGG	1 cut(s)	309
BstENI	CCTNNNNNAGG	1 cut(s)	1331
BstF5I	GGATG	3 cut(s)	448, 861, 1078
BstFNI	CGCG	2 cut(s)	311, 1375
BstKTI	GATC	8 cut(s)	171, 454, 662, 1405, 1514, 1780, 1804, 1957
BstMAI	GTCTC	1 cut(s)	2104
BstMBI	GATC	8 cut(s)	168, 451, 659, 1402, 1511, 1777, 1801, 1954
BstMWI	GCNNNNNNNGC	6 cut(s)	204, 317, 472, 502, 563, 1750
BstNI	CCWGG	3 cut(s)	816, 1191, 1648
BstPAI	GACNNNNGTC	1 cut(s)	619
BstSCI	CCNGG	4 cut(s)	583, 814, 1189, 1646
BstSLI	GKGCMC	1 cut(s)	30
BstSNI	TACGTA	1 cut(s)	336
BstUI	CGCG	2 cut(s)	311, 1375
BstV1I	GCAGC	5 cut(s)	846, 949, 1396, 1439, 1995
BstV2I	GAAGAC	2 cut(s)	137, 659
BstX2I	RGATCY	1 cut(s)	659
BstXI	CCANNNNNNTGG	2 cut(s)	605, 1919
BstYI	RGATCY	1 cut(s)	659
BsuI	GTATCC	2 cut(s)	749, 2078
BsuRI	GGCC	3 cut(s)	185, 496, 1229
BtgI	CCRYGG	1 cut(s)	309
BtrI	CACGTC	1 cut(s)	2011
BtsCI	GGATG	3 cut(s)	448, 861, 1078
BtsIMutI	CAGTG	6 cut(s)	468, 630, 640, 1116, 1617, 1740
Cac8I	GCNNGC	2 cut(s)	974, 1377
CaiI	CAGNNNCTG	1 cut(s)	1400
Cfr10I	RCCGGY	1 cut(s)	1553
Cfr13I	GGNCC	4 cut(s)	494, 686, 812, 1228
Cfr42I	CCGCGG	1 cut(s)	312
Csp6I	GTAC	4 cut(s)	337, 370, 509, 725
CspAI	ACCGGT	1 cut(s)	1553
CviAII	CATG	9 cut(s)	181, 519, 599, 1330, 1877, 1892, 1898, 1919, 2033
CviQI	GTAC	4 cut(s)	337, 370, 509, 725
DdeI	CTNAG	4 cut(s)	471, 498, 690, 1151
DpnI	GATC	8 cut(s)	170, 453, 661, 1404, 1513, 1779, 1803, 1956
DpnII	GATC	8 cut(s)	168, 451, 659, 1402, 1511, 1777, 1801, 1954
DraI	TTTAAA	1 cut(s)	358
EaeI	YGGCCR	1 cut(s)	183
Eam1104I	CTCTTC	4 cut(s)	47, 240, 360, 958
EarI	CTCTTC	4 cut(s)	47, 240, 360, 958
EciI	GGCGGA	1 cut(s)	222
Eco105I	TACGTA	1 cut(s)	336
Eco130I	CCWWGG	1 cut(s)	1830
Eco32I	GATATC	1 cut(s)	708
Eco47I	GGWCC	2 cut(s)	686, 812
Eco57I	CTGAAG	1 cut(s)	1140
Eco88I	CYCGRG	1 cut(s)	116
EcoNI	CCTNNNNNAGG	1 cut(s)	1331
EcoO109I	RGGNCCY	2 cut(s)	812, 1228
EcoRI	GAATTC	2 cut(s)	250, 279
EcoRII	CCWGG	3 cut(s)	814, 1189, 1646
EcoRV	GATATC	1 cut(s)	708
EcoT14I	CCWWGG	1 cut(s)	1830
EcoT22I	ATGCAT	1 cut(s)	322
ErhI	CCWWGG	1 cut(s)	1830
FaeI	CATG	9 cut(s)	184, 522, 602, 1333, 1880, 1895, 1901, 1922, 2036
FalI	AAGNNNNNCTT	2 cut(s)	865, 897
FaqI	GGGAC	2 cut(s)	1199, 1782
FatI	CATG	9 cut(s)	180, 518, 598, 1329, 1876, 1891, 1897, 1918, 2032
FauI	CCCGC	2 cut(s)	392, 498
FbaI	TGATCA	2 cut(s)	1402, 1954
FblI	GTMKAC	2 cut(s)	1176, 1711
Fnu4HI	GCNGC	8 cut(s)	205, 312, 503, 860, 938, 1410, 1428, 1984
FokI	GGATG	3 cut(s)	455, 868, 1065
Fsp4HI	GCNGC	8 cut(s)	205, 312, 503, 860, 938, 1410, 1428, 1984
FspBI	CTAG	4 cut(s)	192, 641, 863, 1314
GluI	GCNGC	8 cut(s)	205, 312, 503, 860, 938, 1410, 1428, 1984
GsaI	CCCAGC	1 cut(s)	1397
GsuI	CTGGAG	1 cut(s)	985
HaeIII	GGCC	3 cut(s)	185, 496, 1229
HapII	CCGG	6 cut(s)	144, 362, 584, 1554, 1663, 2082
Hin1I	GRCGYC	1 cut(s)	81
Hin1II	CATG	9 cut(s)	184, 522, 602, 1333, 1880, 1895, 1901, 1922, 2036
HincII	GTYRAC	2 cut(s)	301, 821
HindII	GTYRAC	2 cut(s)	301, 821
HinfI	GANTC	8 cut(s)	97, 140, 630, 1027, 1113, 1186, 1442, 1565
HpaII	CCGG	6 cut(s)	144, 362, 584, 1554, 1663, 2082
HphI	GGTGA	5 cut(s)	599, 661, 948, 1286, 1315
Hpy166II	GTNNAC	5 cut(s)	301, 821, 1177, 1712, 2014
Hpy188I	TCNGA	7 cut(s)	96, 139, 294, 673, 801, 1447, 1842
Hpy188III	TCNNGA	5 cut(s)	118, 144, 689, 964, 1141
Hpy8I	GTNNAC	5 cut(s)	301, 821, 1177, 1712, 2014
Hpy99I	CGWCG	3 cut(s)	83, 86, 89
HpyAV	CCTTC	7 cut(s)	56, 522, 541, 1046, 1050, 1390, 1629
HpyCH4III	ACNGT	5 cut(s)	298, 1498, 1677, 1735, 1749
HpyCH4IV	ACGT	6 cut(s)	81, 335, 1164, 1301, 1857, 2010
HpyF10VI	GCNNNNNNNGC	6 cut(s)	204, 317, 472, 502, 563, 1750
HpyF3I	CTNAG	4 cut(s)	471, 498, 690, 1151
HpySE526I	ACGT	6 cut(s)	81, 335, 1164, 1301, 1857, 2010
Hsp92I	GRCGYC	1 cut(s)	81
Hsp92II	CATG	9 cut(s)	184, 522, 602, 1333, 1880, 1895, 1901, 1922, 2036
Kpn2I	TCCGGA	1 cut(s)	143
KpnI	GGTACC	1 cut(s)	512
Ksp22I	TGATCA	2 cut(s)	1402, 1954
KspI	CCGCGG	1 cut(s)	312
Kzo9I	GATC	8 cut(s)	168, 451, 659, 1402, 1511, 1777, 1801, 1954
LguI	GCTCTTC	1 cut(s)	958
Lsp1109I	GCAGC	5 cut(s)	846, 949, 1396, 1439, 1995
LweI	GCATC	7 cut(s)	224, 255, 391, 397, 846, 1087, 1295
MaeI	CTAG	4 cut(s)	192, 641, 863, 1314
MaeII	ACGT	6 cut(s)	81, 335, 1164, 1301, 1857, 2010
MaeIII	GTNAC	6 cut(s)	435, 1114, 1321, 1615, 1853, 1964
MalI	GATC	8 cut(s)	170, 453, 661, 1404, 1513, 1779, 1803, 1956
MbiI	CCGCTC	1 cut(s)	204
MboI	GATC	8 cut(s)	168, 451, 659, 1402, 1511, 1777, 1801, 1954
MfeI	CAATTG	1 cut(s)	219
MflI	RGATCY	1 cut(s)	659
MhlI	GDGCHC	2 cut(s)	30, 468
MlsI	TGGCCA	1 cut(s)	185
MluNI	TGGCCA	1 cut(s)	185
MlyI	GAGTC	4 cut(s)	1122, 1195, 1436, 1559
MmeI	TCCRAC	3 cut(s)	733, 1673, 1754
Mox20I	TGGCCA	1 cut(s)	185
Mph1103I	ATGCAT	1 cut(s)	322
MroI	TCCGGA	1 cut(s)	143
MroXI	GAANNNNTTC	2 cut(s)	1096, 2047
MscI	TGGCCA	1 cut(s)	185
MseI	TTAA	7 cut(s)	357, 378, 732, 1128, 1202, 1298, 1530
MslI	CAYNNNNRTG	7 cut(s)	1083, 1328, 1851, 1875, 1896, 1917, 2100
Msp20I	TGGCCA	1 cut(s)	185
MspA1I	CMGCKG	3 cut(s)	311, 502, 619
MspCI	CTTAAG	1 cut(s)	1201
MspI	CCGG	6 cut(s)	144, 362, 584, 1554, 1663, 2082
MspR9I	CCNGG	4 cut(s)	585, 816, 1191, 1648
MunI	CAATTG	1 cut(s)	219
Mva1269I	GAATGC	1 cut(s)	2047
MvaI	CCWGG	3 cut(s)	816, 1191, 1648
MvnI	CGCG	2 cut(s)	311, 1375
MwoI	GCNNNNNNNGC	6 cut(s)	204, 317, 472, 502, 563, 1750
NciI	CCSGG	1 cut(s)	585
NdeII	GATC	8 cut(s)	168, 451, 659, 1402, 1511, 1777, 1801, 1954
NlaIII	CATG	9 cut(s)	184, 522, 602, 1333, 1880, 1895, 1901, 1922, 2036
NlaIV	GGNNCC	6 cut(s)	510, 596, 813, 842, 1667, 1910
NmeAIII	GCCGAG	1 cut(s)	1495
NmuCI	GTSAC	4 cut(s)	1114, 1321, 1615, 1853
NsiI	ATGCAT	1 cut(s)	322
NspV	TTCGAA	1 cut(s)	277
OliI	CACNNNNGTG	1 cut(s)	1851
PaeR7I	CTCGAG	1 cut(s)	116
PciSI	GCTCTTC	1 cut(s)	958
PcsI	WCGNNNNNNNCGW	1 cut(s)	123
PctI	GAATGC	1 cut(s)	2047
PdmI	GAANNNNTTC	2 cut(s)	1096, 2047
PfeI	GAWTC	4 cut(s)	97, 140, 630, 1027
PflFI	GACNNNGTC	1 cut(s)	83
PflMI	CCANNNNNTGG	2 cut(s)	832, 1043
PinAI	ACCGGT	1 cut(s)	1553
PkrI	GCNGC	8 cut(s)	206, 313, 504, 861, 939, 1411, 1429, 1985
PleI	GAGTC	4 cut(s)	1121, 1194, 1436, 1559
PpsI	GAGTC	4 cut(s)	1121, 1194, 1436, 1559
Ppu21I	YACGTR	1 cut(s)	336
PpuMI	RGGWCCY	1 cut(s)	812
PshAI	GACNNNNGTC	1 cut(s)	619
PshBI	ATTAAT	1 cut(s)	1128
PsiI	TTATAA	1 cut(s)	1452
Psp1406I	AACGTT	1 cut(s)	1301
Psp5II	RGGWCCY	1 cut(s)	812
Psp6I	CCWGG	3 cut(s)	814, 1189, 1646
PspFI	CCCAGC	1 cut(s)	1393
PspGI	CCWGG	3 cut(s)	814, 1189, 1646
PspN4I	GGNNCC	6 cut(s)	510, 596, 813, 842, 1667, 1910
PspPI	GGNCC	4 cut(s)	494, 686, 812, 1228
PspPPI	RGGWCCY	1 cut(s)	812
PstNI	CAGNNNCTG	1 cut(s)	1400
PsuI	RGATCY	1 cut(s)	659
PsyI	GACNNNGTC	1 cut(s)	83
RsaI	GTAC	4 cut(s)	338, 371, 510, 726
RsaNI	GTAC	4 cut(s)	337, 370, 509, 725
RseI	CAYNNNNRTG	7 cut(s)	1083, 1328, 1851, 1875, 1896, 1917, 2100
SacII	CCGCGG	1 cut(s)	312
SapI	GCTCTTC	1 cut(s)	958
SaqAI	TTAA	7 cut(s)	357, 378, 732, 1128, 1202, 1298, 1530
SatI	GCNGC	8 cut(s)	205, 312, 503, 860, 938, 1410, 1428, 1984
Sau3AI	GATC	8 cut(s)	168, 451, 659, 1402, 1511, 1777, 1801, 1954
Sau96I	GGNCC	4 cut(s)	494, 686, 812, 1228
ScaI	AGTACT	1 cut(s)	371
SchI	GAGTC	4 cut(s)	1122, 1195, 1436, 1559
ScrFI	CCNGG	4 cut(s)	585, 816, 1191, 1648
SduI	GDGCHC	2 cut(s)	30, 468
SfaNI	GCATC	7 cut(s)	224, 255, 391, 397, 846, 1087, 1295
Sfr274I	CTCGAG	1 cut(s)	116
Sfr303I	CCGCGG	1 cut(s)	312
SfuI	TTCGAA	1 cut(s)	277
SgrBI	CCGCGG	1 cut(s)	312
SinI	GGWCC	2 cut(s)	686, 812
SlaI	CTCGAG	1 cut(s)	116
SmiMI	CAYNNNNRTG	7 cut(s)	1083, 1328, 1851, 1875, 1896, 1917, 2100
SmlI	CTYRAG	2 cut(s)	116, 1201
SmoI	CTYRAG	2 cut(s)	116, 1201
SnaBI	TACGTA	1 cut(s)	336
SsiI	CCGC	8 cut(s)	204, 207, 309, 311, 385, 502, 505, 619
SspI	AATATT	1 cut(s)	1600
SspMI	CTAG	4 cut(s)	192, 641, 863, 1314
StyD4I	CCNGG	4 cut(s)	583, 814, 1189, 1646
StyI	CCWWGG	1 cut(s)	1830
TaaI	ACNGT	5 cut(s)	298, 1498, 1677, 1735, 1749
TaiI	ACGT	6 cut(s)	84, 338, 1167, 1304, 1860, 2013
TaqI	TCGA	4 cut(s)	110, 117, 277, 777
TatI	WGTACW	1 cut(s)	369
TauI	GCSGC	3 cut(s)	207, 314, 505
TfiI	GAWTC	4 cut(s)	97, 140, 630, 1027
Tru1I	TTAA	7 cut(s)	357, 378, 732, 1128, 1202, 1298, 1530
Tru9I	TTAA	7 cut(s)	357, 378, 732, 1128, 1202, 1298, 1530
TscAI	CASTG	6 cut(s)	475, 630, 640, 1123, 1624, 1740
TseFI	GTSAC	4 cut(s)	1114, 1321, 1615, 1853
TseI	GCWGC	5 cut(s)	859, 937, 1409, 1427, 1983
Tsp45I	GTSAC	4 cut(s)	1114, 1321, 1615, 1853
TspGWI	ACGGA	1 cut(s)	566
TspRI	CASTG	6 cut(s)	475, 630, 640, 1123, 1624, 1740
Tth111I	GACNNNGTC	1 cut(s)	83
Van91I	CCANNNNNTGG	2 cut(s)	832, 1043
Vha464I	CTTAAG	1 cut(s)	1201
VpaK11BI	GGWCC	2 cut(s)	686, 812
VspI	ATTAAT	1 cut(s)	1128
XagI	CCTNNNNNAGG	1 cut(s)	1331
XapI	RAATTY	4 cut(s)	250, 271, 279, 991
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1187
XhoI	CTCGAG	1 cut(s)	116
XmiI	GTMKAC	2 cut(s)	1176, 1711
XmnI	GAANNNNTTC	2 cut(s)	1096, 2047
XspI	CTAG	4 cut(s)	192, 641, 863, 1314
ZraI	GACGTC	1 cut(s)	82
ZrmI	AGTACT	1 cut(s)	371
Zsp2I	ATGCAT	1 cut(s)	322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.