Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004191

Physical Location & Seq

Genomic Coordinates Forward (+)

17482250 .. 17489454

Gene Structure 7205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0111200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGGCAAGCTCCGGGTCACGGTGTCCACCGTTCGACTTTTCCGGCAAGTACTACGACGTTGTGTCTGGAGATGGCTGTAGGAGGCAAAGCAGCTTCTTTGAAGGGAAAGAAGTGCTCAGTCAGAGCGTTGGATATTCTGTTATTCTTGGCTTTGGAGCCTTCTTTGCTATCTTCACTTCTTTCCTGGTATGGCTGGAGAAGCGGTATGTTGGTTCGAAGTACACATCCGAATGGTTCAGCACAGCCGGAAGAAATGTTAAAACGGGGCTTATAGCTAGTGTGATTGTATCTCAGTGGACATGGGCAGCTACAATTTTGCAAAGTTCAACTGTTGCTTGGCAGTATGGAGTAAGTGGACCTTTCTGCTGGGGCACGGCCACACTCATAGTCTTCCTCAGTTTCTGCTTTTTGACAAATATTATTGTAACGGCAATGCTGCTGCTCGGTGGTTCTGCCGTTGTAAATGCACTTACCGGAGTAAATATCTATGCTGCTTGCTTCCTGATACCTCTTGGAGTAGTTATCTACACTTTAGCTGGAGGTCTAAAAGCCATATTCTTGGCAAGCTATGTACATTCTGTTATAGTTCACGTGGTCCTAGTCATATTTGTTTACCTTGTATATATGGCAAGCAATGAGCTCGGTAGCCCCAGAGTCATGTACGACCGTCTGGTAGAGGTAGCAAGTAAATCAAGAATCTGTCAGGAGCCAATTTCTCATCATGGGCAGTCTTGTGGTCCTGTTGGTGGGAATTACAAAGGGTCGTACCTAACAATGCTGAGTTCCAGAGGGCTAATGTTCGGGATTATCAACATTGTTGGAAACTTTGGCACTGTTTTTGTTGACAATGGATATTGGGTAAGCGCCATAGCTGCACGGGCGTCATCAACTCACAAGGGTTACTTGTTAGGTGGTCTTGTCTGGTTTGCAGTCCCATTCTCTCTGGCAACATCACTAGGTCTGGGAGCACTGGCCCTTGACTTACCAATAACAGCAAGTGAAGCAAGTCGTGGTCTTGTTCCTCCTGCAACAGCTATAGCTTTGATGGGAAAAGGAGGATCAGTTCTTCTTCTTACTATGCTCTTCATGGCAGTGACATCGATCTGCTGGTTCTTCAGAGCTTATAGCACGATACTAAACAAGGCAGGAGTTTCATTGGAATGGATATATCTGGCAATGGGAGTGCTCATTGGCTCTGCAGTGCTTCCCATTGCTTTTATGCTTCTATGGAGAAAGGCAAATGCAATTGGAGCAATTCTAGGAGCAACCATTGGTTGTCTTCTTGGGATCGTCACTTGGCTATCGGTTGCAAAAATTGAATATGGCCAAGTGAATCTTGACACAACAGGTAGGAATGCACCAATGCTTGCTGGAAACCTTGTCTCTATACTTACTGGTGGTGCTATACATACTATCTGTAGCTTTGTGTCACCACAAAACTACGACTGGGGCACAACTAAGCAGATCACATTGGTTGAGAAGGAAAAGAGTGAGCTGCCAGCCGAAGAGTACAAGGAGGAGAAATTATTGAGAGCAAAAGCATGGATAGTGAAATGGGGTGTTGGATTTACTTTTGTGATTGTTTTGTTGTGGCCTCTTCTAAGTCTTCCAGCAGGGGATTTTAGCATAGGGTACTTCACATTCTGGGCAGTGATTGCAATAGCATGGGGTACAATTGGTTCCATTGTCATCATTGCTTTACCGGTATTCGAGAGCTGGGAAACGATCCAGAGTGTCCTTCGGTGCATGTTTACAAATGACAAGCTCATGGAAAACGTTGAAGAAATGAACTTGAGGATGCGCGCAATCATGTTGGCTATACCAGAAGCAGAGAGAATTTACTTGCTTGAGAAGGAGAAGGCTAAGAAGAAAGAACCAATAGAGCTTACCATAAGACTTGGTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005887 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009566 GO:0009567 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0045026 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051704 GO:0055046 GO:0061024 GO:0061025 GO:0061936 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAP2-GCS1

Protein Analysis

635

Amino Acids

69.03

Weight (kDa)

8.79

Isoelectric Point (pI)

33.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11720
fragaria_vesca	FvH4_5g01650 FvH4_5g28890
malus_domestica	MD04G1066100.v1.1
prunus_persica	Prupe.5G092400_v2.0.a1 Prupe.5G092400_v2.0.a1 Prupe.8G039400_v2.0.a1 Prupe.8G039500_v2.0.a1 Prupe.8G039500_v2.0.a1
pyrus_communis	pycom04g05950
rosa_chinensis	RchiOBHm_Chr4g0410761 RchiOBHm_Chr7g0199071
rosa_laevigata	RLG00000003818 RLG00000008399
rosa_multiflora	Rmu_sc0009499.1_g000004 Rmu_sc0021158.1_g000001
rosa_roxburghii	Rroxscaffold_3G00257150 Rroxscaffold_5G00355510
rosa_rugosa	Rorug04G0111100 Rorug04G0111200 Rorug07G0052400 Rorug07G0052500
rosa_samantha	Rh4AG162900 Rh4BG161700 Rh4BG162100 Rh4CG175700 Rh4DG158600 Rh7AG175800 Rh7BG179000 Rh7CG184900 Rh7DG178600
rosa_wichuraiana	Rw4G013580 Rw7G015420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	1803
AciI	CCGC	1 cut(s)	202
AclI	AACGTT	1 cut(s)	1776
AclWI	GGATC	3 cut(s)	1066, 1295, 1720
AcoI	YGGCCR	2 cut(s)	375, 1324
AcsI	RAATTY	1 cut(s)	1836
AcuI	CTGAAG	1 cut(s)	1099
AcvI	CACGTG	1 cut(s)	592
AcyI	GRCGYC	1 cut(s)	881
AfaI	GTAC	8 cut(s)	50, 221, 573, 662, 767, 1511, 1634, 1672
AfiI	CCNNNNNNNGG	2 cut(s)	18, 746
AgeI	ACCGGT	1 cut(s)	1702
AgsI	TTSAA	4 cut(s)	101, 327, 1319, 1781
AhdI	GACNNNNNGTC	1 cut(s)	61
AjnI	CCWGG	1 cut(s)	183
AloI	GAACNNNNNNTCC	2 cut(s)	1047, 1079
Alw21I	GWGCWC	4 cut(s)	117, 642, 970, 1188
Alw26I	GTCTC	1 cut(s)	1387
AlwI	GGATC	3 cut(s)	1066, 1295, 1720
AlwNI	CAGNNNCTG	1 cut(s)	402
AoxI	GGCC	4 cut(s)	375, 972, 1324, 1592
ApeKI	GCWGC	7 cut(s)	90, 305, 436, 439, 491, 872, 1495
ApoI	RAATTY	1 cut(s)	1836
AsiGI	ACCGGT	1 cut(s)	1702
AspLEI	GCGC	3 cut(s)	866, 1803, 1805
AspS9I	GGNCC	4 cut(s)	356, 595, 737, 973
AsuC2I	CCSGG	1 cut(s)	13
AsuHPI	GGTGA	1 cut(s)	1422
AsuII	TTCGAA	1 cut(s)	215
AvaII	GGWCC	3 cut(s)	356, 595, 737
BaeGI	GKGCMC	2 cut(s)	374, 1454
BalI	TGGCCA	1 cut(s)	1326
BanII	GRGCYC	1 cut(s)	642
BbrPI	CACGTG	1 cut(s)	592
BbsI	GAAGAC	3 cut(s)	382, 1271, 1598
Bbv12I	GWGCWC	4 cut(s)	117, 642, 970, 1188
BbvI	GCAGC	7 cut(s)	102, 317, 423, 426, 478, 859, 1482
BccI	CCATC	2 cut(s)	65, 1039
BceAI	ACGGC	3 cut(s)	390, 440, 444
BcgI	CGANNNNNNTGC	4 cut(s)	622, 656, 1080, 1114
BciT130I	CCWGG	1 cut(s)	185
BcnI	CCSGG	1 cut(s)	13
BcoDI	GTCTC	1 cut(s)	1387
BfaI	CTAG	4 cut(s)	276, 599, 956, 1259
BfmI	CTRYAG	4 cut(s)	76, 1035, 1197, 1417
BfoI	RGCGCY	1 cut(s)	867
BisI	GCNGC	7 cut(s)	91, 306, 437, 440, 492, 873, 1496
BlsI	GCNGC	7 cut(s)	92, 307, 438, 441, 493, 874, 1497
BmcAI	AGTACT	1 cut(s)	50
Bme1390I	CCNGG	2 cut(s)	13, 185
Bme18I	GGWCC	3 cut(s)	356, 595, 737
BmeRI	GACNNNNNGTC	1 cut(s)	61
BmgT120I	GGNCC	4 cut(s)	356, 595, 737, 973
BmiI	GGNNCC	3 cut(s)	157, 708, 1681
BmrFI	CCNGG	2 cut(s)	13, 185
BmrI	ACTGGG	1 cut(s)	1456
BmsI	GCATC	1 cut(s)	1788
BmuI	ACTGGG	1 cut(s)	1456
BpiI	GAAGAC	3 cut(s)	382, 1271, 1598
BpmI	CTGGAG	3 cut(s)	87, 215, 558
Bpu14I	TTCGAA	1 cut(s)	215
BpuEI	CTTGAG	2 cut(s)	1813, 1868
BpuMI	CCSGG	1 cut(s)	13
Bsa29I	ATCGAT	1 cut(s)	1100
BsaAI	YACGTR	1 cut(s)	592
BsaHI	GRCGYC	1 cut(s)	881
BsaWI	WCCGGW	2 cut(s)	473, 1702
BsaXI	ACNNNNNCTCC	4 cut(s)	188, 218, 1047, 1077
Bsc4I	CCNNNNNNNGG	2 cut(s)	18, 746
Bse118I	RCCGGY	1 cut(s)	1702
Bse1I	ACTGG	3 cut(s)	975, 1399, 1451
Bse3DI	GCAATG	5 cut(s)	438, 640, 1182, 1209, 1692
BseBI	CCWGG	1 cut(s)	185
BseCI	ATCGAT	1 cut(s)	1100
BseGI	GGATG	2 cut(s)	224, 1803
BseLI	CCNNNNNNNGG	2 cut(s)	18, 746
BseMI	GCAATG	5 cut(s)	438, 640, 1182, 1209, 1692
BseMII	CTCAG	4 cut(s)	130, 305, 409, 770
BseNI	ACTGG	3 cut(s)	975, 1399, 1451
BsePI	GCGCGC	1 cut(s)	1801
BseRI	GAGGAG	1 cut(s)	1532
BseSI	GKGCMC	2 cut(s)	374, 1454
BseXI	GCAGC	7 cut(s)	102, 317, 423, 426, 478, 859, 1482
BseYI	CCCAGC	2 cut(s)	366, 1716
BsgI	GTGCAG	1 cut(s)	858
Bsh1236I	CGCG	1 cut(s)	1803
Bsh1285I	CGRYCG	1 cut(s)	667
BshFI	GGCC	4 cut(s)	377, 974, 1326, 1594
BshTI	ACCGGT	1 cut(s)	1702
BshVI	ATCGAT	1 cut(s)	1100
BsiEI	CGRYCG	1 cut(s)	667
BsiHKAI	GWGCWC	4 cut(s)	117, 642, 970, 1188
BsiSI	CCGG	5 cut(s)	12, 42, 246, 474, 1703
BslFI	GGGAC	1 cut(s)	917
BslI	CCNNNNNNNGG	2 cut(s)	18, 746
BsmAI	GTCTC	1 cut(s)	1387
BsmFI	GGGAC	1 cut(s)	917
BsmI	GAATGC	1 cut(s)	1360
BsnI	GGCC	4 cut(s)	377, 974, 1326, 1594
Bsp119I	TTCGAA	1 cut(s)	215
Bsp1286I	GDGCHC	6 cut(s)	117, 374, 642, 970, 1188, 1454
Bsp1407I	TGTACA	1 cut(s)	571
Bsp143I	GATC	5 cut(s)	1058, 1101, 1287, 1464, 1725
BspACI	CCGC	1 cut(s)	202
BspANI	GGCC	4 cut(s)	377, 974, 1326, 1594
BspCNI	CTCAG	4 cut(s)	129, 304, 408, 771
BspDI	ATCGAT	1 cut(s)	1100
BspFNI	CGCG	1 cut(s)	1803
BspLI	GGNNCC	3 cut(s)	157, 708, 1681
BspMAI	CTGCAG	1 cut(s)	1201
BspPI	GGATC	3 cut(s)	1066, 1295, 1720
BspQI	GCTCTTC	1 cut(s)	1088
BspT104I	TTCGAA	1 cut(s)	215
BsrDI	GCAATG	5 cut(s)	438, 640, 1182, 1209, 1692
BsrFI	RCCGGY	1 cut(s)	1702
BsrGI	TGTACA	1 cut(s)	571
BsrI	ACTGG	3 cut(s)	975, 1399, 1451
BssAI	RCCGGY	1 cut(s)	1702
BssHII	GCGCGC	1 cut(s)	1801
BssMI	GATC	5 cut(s)	1058, 1101, 1287, 1464, 1725
BssNI	GRCGYC	1 cut(s)	881
Bst2UI	CCWGG	1 cut(s)	185
Bst4CI	ACNGT	5 cut(s)	21, 30, 331, 668, 835
Bst6I	CTCTTC	3 cut(s)	1088, 1500, 1602
BstACI	GRCGYC	1 cut(s)	881
BstAPI	GCANNNNNTGC	1 cut(s)	1655
BstAUI	TGTACA	1 cut(s)	571
BstBAI	YACGTR	1 cut(s)	592
BstBI	TTCGAA	1 cut(s)	215
BstC8I	GCNNGC	7 cut(s)	7, 496, 565, 631, 1368, 1500, 1803
BstDEI	CTNAG	7 cut(s)	116, 291, 395, 779, 1458, 1601, 1863
BstF5I	GGATG	2 cut(s)	224, 1803
BstFNI	CGCG	1 cut(s)	1803
BstH2I	RGCGCY	1 cut(s)	867
BstHHI	GCGC	3 cut(s)	866, 1803, 1805
BstKTI	GATC	5 cut(s)	1061, 1104, 1290, 1467, 1728
BstMAI	GTCTC	1 cut(s)	1387
BstMBI	GATC	5 cut(s)	1058, 1101, 1287, 1464, 1725
BstMCI	CGRYCG	1 cut(s)	667
BstMWI	GCNNNNNNNGC	7 cut(s)	164, 199, 872, 878, 1001, 1250, 1655
BstNI	CCWGG	1 cut(s)	185
BstNSI	RCATGY	1 cut(s)	1750
BstSCI	CCNGG	2 cut(s)	11, 183
BstSFI	CTRYAG	4 cut(s)	76, 1035, 1197, 1417
BstSLI	GKGCMC	2 cut(s)	374, 1454
BstUI	CGCG	1 cut(s)	1803
BstV1I	GCAGC	7 cut(s)	102, 317, 423, 426, 478, 859, 1482
BstV2I	GAAGAC	3 cut(s)	382, 1271, 1598
BstXI	CCANNNNNNTGG	1 cut(s)	559
Bsu15I	ATCGAT	1 cut(s)	1100
BsuRI	GGCC	4 cut(s)	377, 974, 1326, 1594
BsuTUI	ATCGAT	1 cut(s)	1100
BtsCI	GGATG	2 cut(s)	224, 1803
BtsI	GCAGTG	3 cut(s)	1098, 1206, 1656
BtsIMutI	CAGTG	6 cut(s)	299, 831, 968, 1098, 1206, 1656
Cac8I	GCNNGC	7 cut(s)	7, 496, 565, 631, 1368, 1500, 1803
CaiI	CAGNNNCTG	1 cut(s)	402
CfoI	GCGC	3 cut(s)	866, 1803, 1805
Cfr10I	RCCGGY	1 cut(s)	1702
Cfr13I	GGNCC	4 cut(s)	356, 595, 737, 973
ClaI	ATCGAT	1 cut(s)	1100
CseI	GACGC	1 cut(s)	870
Csp6I	GTAC	8 cut(s)	49, 220, 572, 661, 766, 1510, 1633, 1671
CspAI	ACCGGT	1 cut(s)	1702
CviAII	CATG	9 cut(s)	300, 658, 722, 1087, 1542, 1665, 1747, 1768, 1810
CviQI	GTAC	8 cut(s)	49, 220, 572, 661, 766, 1510, 1633, 1671
DdeI	CTNAG	7 cut(s)	116, 291, 395, 779, 1458, 1601, 1863
DpnI	GATC	5 cut(s)	1060, 1103, 1289, 1466, 1727
DpnII	GATC	5 cut(s)	1058, 1101, 1287, 1464, 1725
DriI	GACNNNNNGTC	1 cut(s)	61
EaeI	YGGCCR	2 cut(s)	375, 1324
Eam1104I	CTCTTC	3 cut(s)	1088, 1500, 1602
Eam1105I	GACNNNNNGTC	1 cut(s)	61
EarI	CTCTTC	3 cut(s)	1088, 1500, 1602
Ecl136II	GAGCTC	1 cut(s)	640
Eco24I	GRGCYC	1 cut(s)	642
Eco47I	GGWCC	3 cut(s)	356, 595, 737
Eco53kI	GAGCTC	1 cut(s)	640
Eco57I	CTGAAG	1 cut(s)	1099
Eco72I	CACGTG	1 cut(s)	592
EcoICRI	GAGCTC	1 cut(s)	640
EcoRII	CCWGG	1 cut(s)	183
EcoT38I	GRGCYC	1 cut(s)	642
FaeI	CATG	9 cut(s)	303, 661, 725, 1090, 1545, 1668, 1750, 1771, 1813
FalI	AAGNNNNNCTT	6 cut(s)	343, 375, 887, 919, 1320, 1352
FaqI	GGGAC	1 cut(s)	917
FatI	CATG	9 cut(s)	299, 657, 721, 1086, 1541, 1664, 1746, 1767, 1809
Fnu4HI	GCNGC	7 cut(s)	91, 306, 437, 440, 492, 873, 1496
FokI	GGATG	2 cut(s)	211, 1810
FriOI	GRGCYC	1 cut(s)	642
Fsp4HI	GCNGC	7 cut(s)	91, 306, 437, 440, 492, 873, 1496
FspBI	CTAG	4 cut(s)	276, 599, 956, 1259
GlaI	GCGC	3 cut(s)	865, 1802, 1804
GluI	GCNGC	7 cut(s)	91, 306, 437, 440, 492, 873, 1496
GsaI	CCCAGC	2 cut(s)	370, 1720
GsuI	CTGGAG	3 cut(s)	87, 215, 558
HaeII	RGCGCY	1 cut(s)	867
HaeIII	GGCC	4 cut(s)	377, 974, 1326, 1594
HapII	CCGG	5 cut(s)	12, 42, 246, 474, 1703
HgaI	GACGC	1 cut(s)	870
HhaI	GCGC	3 cut(s)	866, 1803, 1805
Hin1I	GRCGYC	1 cut(s)	881
Hin1II	CATG	9 cut(s)	303, 661, 725, 1090, 1545, 1668, 1750, 1771, 1813
Hin6I	GCGC	3 cut(s)	864, 1801, 1803
HinP1I	GCGC	3 cut(s)	864, 1801, 1803
HincII	GTYRAC	1 cut(s)	844
HindII	GTYRAC	1 cut(s)	844
HinfI	GANTC	3 cut(s)	654, 696, 1333
HpaII	CCGG	5 cut(s)	12, 42, 246, 474, 1703
HphI	GGTGA	1 cut(s)	1422
Hpy166II	GTNNAC	8 cut(s)	26, 222, 297, 356, 589, 613, 844, 1752
Hpy188I	TCNGA	3 cut(s)	123, 229, 1118
Hpy188III	TCNNGA	9 cut(s)	66, 502, 693, 704, 786, 802, 1337, 1711, 1729
Hpy8I	GTNNAC	8 cut(s)	26, 222, 297, 356, 589, 613, 844, 1752
Hpy99I	CGWCG	1 cut(s)	59
HpyAV	CCTTC	6 cut(s)	95, 169, 1474, 1748, 1846, 1852
HpyCH4III	ACNGT	5 cut(s)	21, 30, 331, 668, 835
HpyCH4IV	ACGT	3 cut(s)	57, 591, 1776
HpyF10VI	GCNNNNNNNGC	7 cut(s)	164, 199, 872, 878, 1001, 1250, 1655
HpyF3I	CTNAG	7 cut(s)	116, 291, 395, 779, 1458, 1601, 1863
HpySE526I	ACGT	3 cut(s)	57, 591, 1776
Hsp92I	GRCGYC	1 cut(s)	881
Hsp92II	CATG	9 cut(s)	303, 661, 725, 1090, 1545, 1668, 1750, 1771, 1813
HspAI	GCGC	3 cut(s)	864, 1801, 1803
Kzo9I	GATC	5 cut(s)	1058, 1101, 1287, 1464, 1725
LguI	GCTCTTC	1 cut(s)	1088
LmnI	GCTCC	6 cut(s)	14, 155, 706, 965, 1250, 1262
Lsp1109I	GCAGC	7 cut(s)	102, 317, 423, 426, 478, 859, 1482
LweI	GCATC	1 cut(s)	1788
MaeI	CTAG	4 cut(s)	276, 599, 956, 1259
MaeII	ACGT	3 cut(s)	57, 591, 1776
MaeIII	GTNAC	6 cut(s)	15, 424, 899, 1093, 1291, 1428
MalI	GATC	5 cut(s)	1060, 1103, 1289, 1466, 1727
MboI	GATC	5 cut(s)	1058, 1101, 1287, 1464, 1725
MfeI	CAATTG	2 cut(s)	1245, 1674
MhlI	GDGCHC	6 cut(s)	117, 374, 642, 970, 1188, 1454
MlsI	TGGCCA	1 cut(s)	1326
MluCI	AATT	9 cut(s)	312, 711, 751, 1245, 1254, 1314, 1523, 1674, 1836
MluNI	TGGCCA	1 cut(s)	1326
MlyI	GAGTC	1 cut(s)	663
MmeI	TCCRAC	3 cut(s)	109, 799, 1543
Mox20I	TGGCCA	1 cut(s)	1326
MscI	TGGCCA	1 cut(s)	1326
MseI	TTAA	1 cut(s)	258
MslI	CAYNNNNRTG	3 cut(s)	229, 1091, 1159
Msp20I	TGGCCA	1 cut(s)	1326
MspI	CCGG	5 cut(s)	12, 42, 246, 474, 1703
MspR9I	CCNGG	2 cut(s)	13, 185
MunI	CAATTG	2 cut(s)	1245, 1674
Mva1269I	GAATGC	1 cut(s)	1360
MvaI	CCWGG	1 cut(s)	185
MvnI	CGCG	1 cut(s)	1803
MwoI	GCNNNNNNNGC	7 cut(s)	164, 199, 872, 878, 1001, 1250, 1655
NciI	CCSGG	1 cut(s)	13
NdeII	GATC	5 cut(s)	1058, 1101, 1287, 1464, 1725
NlaIII	CATG	9 cut(s)	303, 661, 725, 1090, 1545, 1668, 1750, 1771, 1813
NlaIV	GGNNCC	3 cut(s)	157, 708, 1681
NmuCI	GTSAC	4 cut(s)	15, 1093, 1291, 1428
NspI	RCATGY	1 cut(s)	1750
NspV	TTCGAA	1 cut(s)	215
PauI	GCGCGC	1 cut(s)	1801
PciSI	GCTCTTC	1 cut(s)	1088
PctI	GAATGC	1 cut(s)	1360
PfeI	GAWTC	2 cut(s)	696, 1333
PflFI	GACNNNGTC	1 cut(s)	1899
PinAI	ACCGGT	1 cut(s)	1702
PkrI	GCNGC	7 cut(s)	92, 307, 438, 441, 493, 874, 1497
PleI	GAGTC	1 cut(s)	662
PmaCI	CACGTG	1 cut(s)	592
PmlI	CACGTG	1 cut(s)	592
PpsI	GAGTC	1 cut(s)	662
Ppu21I	YACGTR	1 cut(s)	592
Psp124BI	GAGCTC	1 cut(s)	642
Psp1406I	AACGTT	1 cut(s)	1776
Psp6I	CCWGG	1 cut(s)	183
PspCI	CACGTG	1 cut(s)	592
PspFI	CCCAGC	2 cut(s)	366, 1716
PspGI	CCWGG	1 cut(s)	183
PspN4I	GGNNCC	3 cut(s)	157, 708, 1681
PspPI	GGNCC	4 cut(s)	356, 595, 737, 973
PsrI	GAACNNNNNNTAC	2 cut(s)	1663, 1695
PstI	CTGCAG	1 cut(s)	1201
PstNI	CAGNNNCTG	1 cut(s)	402
PsyI	GACNNNGTC	1 cut(s)	1899
PteI	GCGCGC	1 cut(s)	1801
RsaI	GTAC	8 cut(s)	50, 221, 573, 662, 767, 1511, 1634, 1672
RsaNI	GTAC	8 cut(s)	49, 220, 572, 661, 766, 1510, 1633, 1671
RseI	CAYNNNNRTG	3 cut(s)	229, 1091, 1159
SacI	GAGCTC	1 cut(s)	642
SapI	GCTCTTC	1 cut(s)	1088
SaqAI	TTAA	1 cut(s)	258
SatI	GCNGC	7 cut(s)	91, 306, 437, 440, 492, 873, 1496
Sau3AI	GATC	5 cut(s)	1058, 1101, 1287, 1464, 1725
Sau96I	GGNCC	4 cut(s)	356, 595, 737, 973
ScaI	AGTACT	1 cut(s)	50
SchI	GAGTC	1 cut(s)	663
ScrFI	CCNGG	2 cut(s)	13, 185
SduI	GDGCHC	6 cut(s)	117, 374, 642, 970, 1188, 1454
SfaNI	GCATC	1 cut(s)	1788
SfcI	CTRYAG	4 cut(s)	76, 1035, 1197, 1417
SfuI	TTCGAA	1 cut(s)	215
SinI	GGWCC	3 cut(s)	356, 595, 737
SmiMI	CAYNNNNRTG	3 cut(s)	229, 1091, 1159
SmlI	CTYRAG	2 cut(s)	1792, 1847
SmoI	CTYRAG	2 cut(s)	1792, 1847
Sse9I	AATT	9 cut(s)	312, 711, 751, 1245, 1254, 1314, 1523, 1674, 1836
SsiI	CCGC	1 cut(s)	202
SspI	AATATT	1 cut(s)	418
SspMI	CTAG	4 cut(s)	276, 599, 956, 1259
SstI	GAGCTC	1 cut(s)	642
StyD4I	CCNGG	2 cut(s)	11, 183
TaaI	ACNGT	5 cut(s)	21, 30, 331, 668, 835
TaiI	ACGT	3 cut(s)	60, 594, 1779
TaqI	TCGA	4 cut(s)	33, 215, 1100, 1710
TasI	AATT	9 cut(s)	312, 711, 751, 1245, 1254, 1314, 1523, 1674, 1836
TatI	WGTACW	4 cut(s)	48, 219, 571, 1509
TfiI	GAWTC	2 cut(s)	696, 1333
Tru1I	TTAA	1 cut(s)	258
Tru9I	TTAA	1 cut(s)	258
TscAI	CASTG	6 cut(s)	299, 838, 975, 1098, 1206, 1656
TseFI	GTSAC	4 cut(s)	15, 1093, 1291, 1428
TseI	GCWGC	7 cut(s)	90, 305, 436, 439, 491, 872, 1495
Tsp45I	GTSAC	4 cut(s)	15, 1093, 1291, 1428
TspDTI	ATGAA	3 cut(s)	1075, 1143, 1802
TspRI	CASTG	6 cut(s)	299, 838, 975, 1098, 1206, 1656
Tth111I	GACNNNGTC	1 cut(s)	1899
VpaK11BI	GGWCC	3 cut(s)	356, 595, 737
XapI	RAATTY	1 cut(s)	1836
XceI	RCATGY	1 cut(s)	1750
XspI	CTAG	4 cut(s)	276, 599, 956, 1259
ZrmI	AGTACT	1 cut(s)	50

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.