Rmu_sc0009499.1_g000004

Male gamete fusion factor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009499.1
Physical Location & Seq
Forward (+)
30661 .. 37275
6615 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009499.1_g000004.1.cds

Sequence Viewer

Length: 1530 bp
atgaggttcttcaagcttgttcagcagcacttggcgtcaggctctgatggtgaagataatggaagttcaaacatttcagaggaggatttggagaccccatctgttgacttcttacagacacggctgcctcccaagataaaatcgtacagatcatatcgcctttctctatctgttacttttcattattctgttttctcccagacattcccaaaaatgggaaaccctccaccaaaattatggcttatcaccctcctcttcctcccttgcttcttcataagcgacgtcgttggagtccagatcctctccaaatcgaaactcgacaagtgcgagaagacttccgaatccggtgaacttaactgcactaagaagatcgtcctcaacatggccgtccctagtggcgcgagtggaggtgaggcttcgattgttgcggaaattgtcgaggtagaggagaattcaagcaagaagatgcaaacttttcgaataccacctgtcctgactgtcaataaatccgcagcttatgccttgtacgagcttacgtacattcgagatgttgcatataagcctgaagagtactatgttaagacccgaaagtgtgagccagatgcagatgcaaaagttgtcaagatatgtcctgaaaacagaacagcaatatccaatgataagtttttgcaagctaatcttattggagactttgttggatacacaaatattccttcattcgaggatttttaccttgtaattccgaggcaggctgaccaaaaccgtatcgaaaggaaacaggtgccactttttggtgtggaaggaaggttcgaaaggataaaccagcatccaaatgcagggactcattcgttttccataggagtcacagaagtcattaatacaaatctcttgatagaactaagtgctgatgacgtagattatgtctaccaaaggagtcctgggaaaatcttaagcatcaatatcccaacatttgaggcccttactcaatttggaactgctacaatcacagcaaaaaatactggtgaagtagaagcatcctattgcttaacgccaaaagaaatgttaactcgatcattcaaactttacccaggaaccgatcaagctgcaaaatacatctgtgcagctatacttaaggactctaattataatgaagtggatagggccgagtgccaattttccacgacatctactgtcattgataatggatcacaggatagtccgagcaccaagaatacaagacacagaattaatgtagatcaccgacatgttcatgtccataaacatcatgggcatgaagcaaggcaccacaacgatggcactcatcataaaagaaaaagcactcacaatgatcacaagcatagccactttcaaagaagtagtgactaccattacgaccttcaccatgtccataaggataagcacaagcatagccgaagaaggagttcaagtgttatgcagaaagttgatgagaacactggataccacggccagaaaaaacaaaggagaacaaaaaaagactattcaaagtga

Protein Analysis

509

Amino Acids

57.88

Weight (kDa)

8.82

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1146
AatII GACGTC 1 cut(s) 285
AccB1I GGYRCC 2 cut(s) 781, 1302
AccB7I CCANNNNNTGG 1 cut(s) 791
AccI GTMKAC 1 cut(s) 924
AccII CGCG 1 cut(s) 401
AciI CCGC 2 cut(s) 428, 510
AclWI GGATC 2 cut(s) 292, 1213
AcoI YGGCCR 2 cut(s) 384, 1486
AcsI RAATTY 1 cut(s) 451
AcuI CTGAAG 1 cut(s) 585
AcyI GRCGYC 2 cut(s) 35, 282
AfaI GTAC 4 cut(s) 146, 527, 539, 572
AfiI CCNNNNNNNGG 5 cut(s) 214, 215, 382, 791, 836
AflII CTTAAG 2 cut(s) 949, 1130
AflIII ACRYGT 1 cut(s) 1264
AgsI TTSAA 7 cut(s) 13, 69, 456, 1078, 1370, 1446, 1524
AjnI CCWGG 2 cut(s) 937, 1087
AloI GAACNNNNNNTCC 2 cut(s) 791, 823
AluBI AGCT 6 cut(s) 16, 515, 532, 674, 1103, 1124
AluI AGCT 6 cut(s) 16, 515, 532, 674, 1103, 1124
Alw21I GWGCWC 1 cut(s) 1226
Alw26I GTCTC 2 cut(s) 86, 681
AlwI GGATC 2 cut(s) 292, 1213
AlwNI CAGNNNCTG 1 cut(s) 44
AoxI GGCC 4 cut(s) 384, 975, 1161, 1486
ApeKI GCWGC 5 cut(s) 25, 124, 512, 1103, 1121
ApoI RAATTY 1 cut(s) 451
AseI ATTAAT 2 cut(s) 876, 1248
Asp700I GAANNNNTTC 1 cut(s) 1441
AspLEI GCGC 1 cut(s) 401
AspS9I GGNCC 2 cut(s) 976, 1161
AsuHPI GGTGA 7 cut(s) 62, 238, 359, 422, 1034, 1250, 1391
AsuII TTCGAA 2 cut(s) 478, 810
BanI GGYRCC 2 cut(s) 781, 1302
BbsI GAAGAC 1 cut(s) 338
Bbv12I GWGCWC 1 cut(s) 1226
BbvI GCAGC 5 cut(s) 37, 111, 524, 1090, 1133
BccI CCATC 3 cut(s) 41, 106, 1307
BceAI ACGGC 3 cut(s) 137, 371, 1501
BcgI CGANNNNNNTGC 4 cut(s) 458, 492, 1085, 1119
BciT130I CCWGG 2 cut(s) 939, 1089
BciVI GTATCC 2 cut(s) 692, 1472
BclI TGATCA 1 cut(s) 1348
BcoDI GTCTC 2 cut(s) 86, 681
BfaI CTAG 1 cut(s) 393
BfrI CTTAAG 2 cut(s) 949, 1130
BfuI GTATCC 2 cut(s) 692, 1472
BisI GCNGC 5 cut(s) 26, 125, 513, 1104, 1122
BlsI GCNGC 5 cut(s) 27, 126, 514, 1105, 1123
BmcAI AGTACT 1 cut(s) 572
Bme1390I CCNGG 2 cut(s) 939, 1089
BmgT120I GGNCC 2 cut(s) 976, 1161
BmiI GGNNCC 3 cut(s) 783, 1093, 1304
BmrFI CCNGG 2 cut(s) 939, 1089
BmsI GCATC 6 cut(s) 456, 592, 598, 835, 963, 1043
BpiI GAAGAC 1 cut(s) 338
Bpu14I TTCGAA 2 cut(s) 478, 810
BsaAI YACGTR 1 cut(s) 537
BsaHI GRCGYC 2 cut(s) 35, 282
BsaI GGTCTC 1 cut(s) 86
BsaJI CCNNGG 4 cut(s) 743, 938, 1087, 1483
BsaWI WCCGGW 1 cut(s) 344
BsaXI ACNNNNNCTCC 4 cut(s) 678, 708, 1432, 1462
Bsc4I CCNNNNNNNGG 5 cut(s) 214, 215, 382, 791, 836
Bse1I ACTGG 2 cut(s) 1024, 1480
BseBI CCWGG 2 cut(s) 939, 1089
BseDI CCNNGG 4 cut(s) 743, 938, 1087, 1483
BseGI GGATG 2 cut(s) 826, 1034
BseLI CCNNNNNNNGG 5 cut(s) 214, 215, 382, 791, 836
BseNI ACTGG 2 cut(s) 1024, 1480
BseRI GAGGAG 3 cut(s) 95, 242, 461
BseXI GCAGC 5 cut(s) 37, 111, 524, 1090, 1133
BsgI GTGCAG 2 cut(s) 343, 1140
Bsh1236I CGCG 1 cut(s) 401
BshFI GGCC 4 cut(s) 386, 977, 1163, 1488
BshNI GGYRCC 2 cut(s) 781, 1302
BsiHKAI GWGCWC 1 cut(s) 1226
BsiSI CCGG 1 cut(s) 345
BslFI GGGAC 2 cut(s) 374, 853
BslI CCNNNNNNNGG 5 cut(s) 214, 215, 382, 791, 836
BsmAI GTCTC 2 cut(s) 86, 681
BsmFI GGGAC 2 cut(s) 374, 853
BsnI GGCC 4 cut(s) 386, 977, 1163, 1488
Bso31I GGTCTC 1 cut(s) 86
Bsp119I TTCGAA 2 cut(s) 478, 810
Bsp1286I GDGCHC 1 cut(s) 1226
Bsp143I GATC 8 cut(s) 149, 297, 369, 1070, 1096, 1205, 1255, 1348
BspACI CCGC 2 cut(s) 428, 510
BspANI GGCC 4 cut(s) 386, 977, 1163, 1488
BspFNI CGCG 1 cut(s) 401
BspLI GGNNCC 3 cut(s) 783, 1093, 1304
BspPI GGATC 2 cut(s) 292, 1213
BspT104I TTCGAA 2 cut(s) 478, 810
BspT107I GGYRCC 2 cut(s) 781, 1302
BspTI CTTAAG 2 cut(s) 949, 1130
BspTNI GGTCTC 1 cut(s) 86
BsrI ACTGG 2 cut(s) 1024, 1480
BssECI CCNNGG 4 cut(s) 743, 938, 1087, 1483
BssMI GATC 8 cut(s) 149, 297, 369, 1070, 1096, 1205, 1255, 1348
BssNI GRCGYC 2 cut(s) 35, 282
Bst2UI CCWGG 2 cut(s) 939, 1089
Bst4CI ACNGT 3 cut(s) 499, 764, 1192
Bst6I CTCTTC 2 cut(s) 260, 561
BstACI GRCGYC 2 cut(s) 35, 282
BstAFI CTTAAG 2 cut(s) 949, 1130
BstAPI GCANNNNNTGC 1 cut(s) 518
BstBAI YACGTR 1 cut(s) 537
BstBI TTCGAA 2 cut(s) 478, 810
BstC8I GCNNGC 2 cut(s) 672, 750
BstDEI CTNAG 2 cut(s) 363, 899
BstDSI CCRYGG 1 cut(s) 1483
BstF5I GGATG 2 cut(s) 826, 1034
BstFNI CGCG 1 cut(s) 401
BstHHI GCGC 1 cut(s) 401
BstKTI GATC 8 cut(s) 152, 300, 372, 1073, 1099, 1208, 1258, 1351
BstMAI GTCTC 2 cut(s) 86, 681
BstMBI GATC 8 cut(s) 149, 297, 369, 1070, 1096, 1205, 1255, 1348
BstMWI GCNNNNNNNGC 2 cut(s) 22, 518
BstNI CCWGG 2 cut(s) 939, 1089
BstNSI RCATGY 1 cut(s) 1268
BstSCI CCNGG 2 cut(s) 937, 1087
BstSNI TACGTA 1 cut(s) 537
BstUI CGCG 1 cut(s) 401
BstV1I GCAGC 5 cut(s) 37, 111, 524, 1090, 1133
BstV2I GAAGAC 1 cut(s) 338
BstX2I RGATCY 1 cut(s) 297
BstXI CCANNNNNNTGG 2 cut(s) 237, 1313
BstYI RGATCY 1 cut(s) 297
BsuI GTATCC 2 cut(s) 692, 1472
BsuRI GGCC 4 cut(s) 386, 977, 1163, 1488
BtgI CCRYGG 1 cut(s) 1483
BtsCI GGATG 2 cut(s) 826, 1034
BtsIMutI CAGTG 1 cut(s) 1473
Cac8I GCNNGC 2 cut(s) 672, 750
CaiI CAGNNNCTG 1 cut(s) 44
CfoI GCGC 1 cut(s) 401
Cfr13I GGNCC 2 cut(s) 976, 1161
CseI GACGC 1 cut(s) 24
Csp6I GTAC 4 cut(s) 145, 526, 538, 571
CviAII CATG 6 cut(s) 382, 1265, 1271, 1286, 1292, 1403
CviQI GTAC 4 cut(s) 145, 526, 538, 571
DdeI CTNAG 2 cut(s) 363, 899
DpnI GATC 8 cut(s) 151, 299, 371, 1072, 1098, 1207, 1257, 1350
DpnII GATC 8 cut(s) 149, 297, 369, 1070, 1096, 1205, 1255, 1348
EaeI YGGCCR 2 cut(s) 384, 1486
Eam1104I CTCTTC 2 cut(s) 260, 561
EarI CTCTTC 2 cut(s) 260, 561
Eco105I TACGTA 1 cut(s) 537
Eco31I GGTCTC 1 cut(s) 86
Eco57I CTGAAG 1 cut(s) 585
EcoO109I RGGNCCY 1 cut(s) 976
EcoRI GAATTC 1 cut(s) 451
EcoRII CCWGG 2 cut(s) 937, 1087
FaeI CATG 6 cut(s) 385, 1268, 1274, 1289, 1295, 1406
FalI AAGNNNNNCTT 2 cut(s) 663, 695
FaqI GGGAC 2 cut(s) 374, 853
FatI CATG 6 cut(s) 381, 1264, 1270, 1285, 1291, 1402
FbaI TGATCA 1 cut(s) 1348
FblI GTMKAC 1 cut(s) 924
Fnu4HI GCNGC 5 cut(s) 26, 125, 513, 1104, 1122
FokI GGATG 2 cut(s) 813, 1021
Fsp4HI GCNGC 5 cut(s) 26, 125, 513, 1104, 1122
FspBI CTAG 1 cut(s) 393
GlaI GCGC 1 cut(s) 400
GluI GCNGC 5 cut(s) 26, 125, 513, 1104, 1122
HaeIII GGCC 4 cut(s) 386, 977, 1163, 1488
HapII CCGG 1 cut(s) 345
HgaI GACGC 1 cut(s) 24
HhaI GCGC 1 cut(s) 401
Hin1I GRCGYC 2 cut(s) 35, 282
Hin1II CATG 6 cut(s) 385, 1268, 1274, 1289, 1295, 1406
Hin6I GCGC 1 cut(s) 399
HinP1I GCGC 1 cut(s) 399
HincII GTYRAC 2 cut(s) 106, 1065
HindII GTYRAC 2 cut(s) 106, 1065
HindIII AAGCTT 1 cut(s) 14
HinfI GANTC 6 cut(s) 291, 341, 841, 861, 934, 1136
HpaI GTTAAC 1 cut(s) 1065
HpaII CCGG 1 cut(s) 345
HphI GGTGA 7 cut(s) 62, 238, 359, 422, 1034, 1250, 1391
Hpy166II GTNNAC 4 cut(s) 106, 350, 925, 1065
Hpy188I TCNGA 5 cut(s) 46, 79, 340, 744, 1221
Hpy188III TCNNGA 6 cut(s) 295, 493, 545, 622, 632, 889
Hpy8I GTNNAC 4 cut(s) 106, 350, 925, 1065
Hpy99I CGWCG 2 cut(s) 284, 287
HpyAV CCTTC 5 cut(s) 723, 794, 798, 1406, 1431
HpyCH4III ACNGT 3 cut(s) 499, 764, 1192
HpyCH4IV ACGT 3 cut(s) 282, 536, 912
HpyF10VI GCNNNNNNNGC 2 cut(s) 22, 518
HpyF3I CTNAG 2 cut(s) 363, 899
HpySE526I ACGT 3 cut(s) 282, 536, 912
Hsp92I GRCGYC 2 cut(s) 35, 282
Hsp92II CATG 6 cut(s) 385, 1268, 1274, 1289, 1295, 1406
HspAI GCGC 1 cut(s) 399
Ksp22I TGATCA 1 cut(s) 1348
KspAI GTTAAC 1 cut(s) 1065
Kzo9I GATC 8 cut(s) 149, 297, 369, 1070, 1096, 1205, 1255, 1348
Lsp1109I GCAGC 5 cut(s) 37, 111, 524, 1090, 1133
LweI GCATC 6 cut(s) 456, 592, 598, 835, 963, 1043
MaeI CTAG 1 cut(s) 393
MaeII ACGT 3 cut(s) 282, 536, 912
MaeIII GTNAC 3 cut(s) 172, 862, 1379
MalI GATC 8 cut(s) 151, 299, 371, 1072, 1098, 1207, 1257, 1350
MboI GATC 8 cut(s) 149, 297, 369, 1070, 1096, 1205, 1255, 1348
MboII GAAGA 8 cut(s) 65, 247, 262, 343, 379, 475, 578, 1446
MflI RGATCY 1 cut(s) 297
MhlI GDGCHC 1 cut(s) 1226
MluCI AATT 8 cut(s) 233, 432, 451, 738, 986, 1141, 1172, 1245
MlyI GAGTC 5 cut(s) 300, 835, 870, 943, 1130
MmeI TCCRAC 2 cut(s) 268, 676
MroXI GAANNNNTTC 1 cut(s) 1441
MseI TTAA 8 cut(s) 354, 579, 876, 950, 1046, 1064, 1131, 1248
MslI CAYNNNNRTG 5 cut(s) 831, 1263, 1269, 1290, 1311
MspCI CTTAAG 2 cut(s) 949, 1130
MspI CCGG 1 cut(s) 345
MspR9I CCNGG 2 cut(s) 939, 1089
MvaI CCWGG 2 cut(s) 939, 1089
MvnI CGCG 1 cut(s) 401
MwoI GCNNNNNNNGC 2 cut(s) 22, 518
NdeII GATC 8 cut(s) 149, 297, 369, 1070, 1096, 1205, 1255, 1348
NlaIII CATG 6 cut(s) 385, 1268, 1274, 1289, 1295, 1406
NlaIV GGNNCC 3 cut(s) 783, 1093, 1304
NmeAIII GCCGAG 1 cut(s) 1189
NmuCI GTSAC 2 cut(s) 862, 1379
NspI RCATGY 1 cut(s) 1268
NspV TTCGAA 2 cut(s) 478, 810
PciI ACATGT 1 cut(s) 1264
PcsI WCGNNNNNNNCGW 1 cut(s) 324
PdmI GAANNNNTTC 1 cut(s) 1441
PfeI GAWTC 1 cut(s) 341
PflMI CCANNNNNTGG 1 cut(s) 791
PkrI GCNGC 5 cut(s) 27, 126, 514, 1105, 1123
PleI GAGTC 5 cut(s) 299, 835, 869, 942, 1130
PpsI GAGTC 5 cut(s) 299, 835, 869, 942, 1130
Ppu21I YACGTR 1 cut(s) 537
PscI ACATGT 1 cut(s) 1264
PshBI ATTAAT 2 cut(s) 876, 1248
PsiI TTATAA 1 cut(s) 1146
Psp6I CCWGG 2 cut(s) 937, 1087
PspGI CCWGG 2 cut(s) 937, 1087
PspN4I GGNNCC 3 cut(s) 783, 1093, 1304
PspPI GGNCC 2 cut(s) 976, 1161
PsrI GAACNNNNNNTAC 2 cut(s) 1463, 1495
PstNI CAGNNNCTG 1 cut(s) 44
PsuI RGATCY 1 cut(s) 297
RsaI GTAC 4 cut(s) 146, 527, 539, 572
RsaNI GTAC 4 cut(s) 145, 526, 538, 571
RseI CAYNNNNRTG 5 cut(s) 831, 1263, 1269, 1290, 1311
SaqAI TTAA 8 cut(s) 354, 579, 876, 950, 1046, 1064, 1131, 1248
SatI GCNGC 5 cut(s) 26, 125, 513, 1104, 1122
Sau3AI GATC 8 cut(s) 149, 297, 369, 1070, 1096, 1205, 1255, 1348
Sau96I GGNCC 2 cut(s) 976, 1161
ScaI AGTACT 1 cut(s) 572
SchI GAGTC 5 cut(s) 300, 835, 870, 943, 1130
ScrFI CCNGG 2 cut(s) 939, 1089
SduI GDGCHC 1 cut(s) 1226
SfaNI GCATC 6 cut(s) 456, 592, 598, 835, 963, 1043
SfuI TTCGAA 2 cut(s) 478, 810
SmiMI CAYNNNNRTG 5 cut(s) 831, 1263, 1269, 1290, 1311
SmlI CTYRAG 2 cut(s) 949, 1130
SmoI CTYRAG 2 cut(s) 949, 1130
SnaBI TACGTA 1 cut(s) 537
Sse9I AATT 8 cut(s) 233, 432, 451, 738, 986, 1141, 1172, 1245
SsiI CCGC 2 cut(s) 428, 510
SspI AATATT 1 cut(s) 709
SspMI CTAG 1 cut(s) 393
StyD4I CCNGG 2 cut(s) 937, 1087
TaaI ACNGT 3 cut(s) 499, 764, 1192
TaiI ACGT 3 cut(s) 285, 539, 915
TasI AATT 8 cut(s) 233, 432, 451, 738, 986, 1141, 1172, 1245
TatI WGTACW 1 cut(s) 570
TfiI GAWTC 1 cut(s) 341
Tru1I TTAA 8 cut(s) 354, 579, 876, 950, 1046, 1064, 1131, 1248
Tru9I TTAA 8 cut(s) 354, 579, 876, 950, 1046, 1064, 1131, 1248
TscAI CASTG 1 cut(s) 1480
TseFI GTSAC 2 cut(s) 862, 1379
TseI GCWGC 5 cut(s) 25, 124, 512, 1103, 1121
Tsp45I GTSAC 2 cut(s) 862, 1379
TspDTI ATGAA 6 cut(s) 170, 262, 705, 1164, 1259, 1308
TspRI CASTG 1 cut(s) 1480
Van91I CCANNNNNTGG 1 cut(s) 791
Vha464I CTTAAG 2 cut(s) 949, 1130
VspI ATTAAT 2 cut(s) 876, 1248
XapI RAATTY 1 cut(s) 451
XceI RCATGY 1 cut(s) 1268
XcmI CCANNNNNNNNNTGG 3 cut(s) 234, 935, 1283
XmiI GTMKAC 1 cut(s) 924
XmnI GAANNNNTTC 1 cut(s) 1441
XspI CTAG 1 cut(s) 393
ZraI GACGTC 1 cut(s) 283
ZrmI AGTACT 1 cut(s) 572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.