Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0004191

Physical Location & Seq

Genomic Coordinates Forward (+)

14156337 .. 14162965

Gene Structure 6629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG179000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGAGAATCCCTCCACCAAAATTATGGCTCCTCTTCCTCCCTTGCTTTATCGGCCACGTCGTTGGAGTCCAGATCCTCTCCAAATCGAAACTCGACAAGTGCGAGAAGACTTCCGATTCCGGTGACTTGAATTGCACTAAGAAGATCGTCCTCAACATGGCCGTCCCTAGTGGCGCGAGTGGAGGTGAGGCTTCGATTGTTGCGGAAATTGTCGAGGTAGAGGAGAATTCAAGCAAGAAGATGCAAACTTTTCGCATACCGCCTGTCCTGACTGTCAATAAATCCGCGGCTTATGCCTTGTACGAGCTTACGTACATTCGAGATGTTGCATATAAGCCTGAAGAGTACTATGTTAAGACTCGAAAGTGTGAGCCAGATGCAGATGCAAAAGTTGTGAAGATATGTGAGAGGTTACGAGATGAAAATGGTACCATTATTGAGCATACAGAGCCAATGTGCTGTCCTTGTGGGCCTCAGCGGCGGGTACCTTCATCATGTGGAAGTGTTTTTGGCAAGTTGATAAAAGGAAAACCCAATACAGCCCATTGTGTCCGCTTTCCGGGTGATTGGTTCCATGTTTTTGGTATTGGACAGCGCTCAGTGGGATTTAGTGTTCTCATTCAAGTAAAGACAGGATCTAAAGTTTCGGAAGTGCTTGTAGGTCCTGAAAACAGAACAGCAATATCCAATGATAAGTTTTTGCGAGCTAATCTTATTGGAGACTTTGTTGGATACACAAATATTCCTTCATTCGAGGATTTTTACCTTGTAATTCCGAGGCAGGGGGGCACAGGTCACCCCCAGAATTTGGGAAGGAACTTTTCTATGTGGATGCTGCTGGAGAGAGTTAGATTTACTTTAGATGGTGTTGAATGTAATAAAATTGGTGTCAACTTTGAGGCTTTTAATGGGCAGCCAAACTTTTGCTCTTCACCATTCTGGAGTTGCTTGCATAATCAGTTATGGAATTTCTTGGAGGCTGACCAAAACCGTATCGAAAGGAAACAGGTGCCACTTTTTGGTGTGGAAGGAAGGTTCGAAAGGATAAACCAGCATCCAAATGCAGGGACTCATTCGTTTTCCATAGGAGTCACAGAAGTCATTAATACAAATCTCTTGATAGAACTAAGTGCTGATGACGTAGATTATGTCTACCAAAGGAGTCCTGGGAAAATCTTAAGCATCAATATCCCAACATTTGAGGCCCTTACTCAATTTGGAACTGCTACAATCACAGCAAAGAATACTGGTGAAGTGGAAGCATCCTATTGCTTAACGTTTGATTGCTCAAGTGATGTCACCCTTATGGAGGAGCAATACTTCATTATGAAGCCAAAAGAAACATTATCTCGATCATTCAAACTTTACCCAGGAACCGATCAAGCTGCAAAATACATCTGTGCAGCTATACTTAAGGACTCTAATTATAATGAAGTGGATAGAGCCGAGTGCCAATTTTCTACGACATCTACTGTCATTGATAATGGATCACAGGGTAATCCCTTTAAGCCACCAAAGACAGGAACAACTGGTTTCTTTGACTCCATTGAAAGCTTTTGGAACCATGTGTGGAAGACTTTTATAGATTTCATCACTGGAAAATCTTGCAGAACAAAATGCTCTGGATTCTTTGACTTCAGATGCCATATACAGTACATATGTATGAGTTGGATTCTGATGTTTGGTCTACTTTTAGCAATTTTTCCAACAGTCAGTGTGCTACTGTGGCTTTTACATCAGAAGGGACTTTTTGATCCTTTATATGACTGGTGGGATGATCATTTCTGGGAGGATAGTCCGAGCACCAAGAATACAAGAAACAGAATTAATGTAGATCACCGACATGTTCATGTCCATAAACATCATGGGCATGAAGCAAGGCACCACAACTATGGCACTCATCATAAAAGAAAAAGCACTCACAATGATCACAAGCATAGCCACTTTCAAAGAAGTAGTGACTACCATTACGACCTTCACCATGTCCATAAGGATAAGCACAAGCATGGCCGAAGAAGGAGTTCAAGTGTTATGCAGAAAGTTGATGAGAACACTGGATACCACGGCCAGAAAAAACAAAGGAAAACAACAAAAGACTATTCAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005887 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009566 GO:0009567 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044703 GO:0045026 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051704 GO:0055046 GO:0061024 GO:0061025 GO:0061936 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAP2-GCS1

Protein Analysis

702

Amino Acids

80.06

Weight (kDa)

8.62

Isoelectric Point (pI)

40.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAP2-GCS1	PF10699	43 - 555	3.1e-160	Male gamete fusion factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11720
fragaria_vesca	FvH4_5g01650 FvH4_5g28890
malus_domestica	MD04G1066100.v1.1
prunus_persica	Prupe.5G092400_v2.0.a1 Prupe.5G092400_v2.0.a1 Prupe.8G039400_v2.0.a1 Prupe.8G039500_v2.0.a1 Prupe.8G039500_v2.0.a1
pyrus_communis	pycom04g05950
rosa_chinensis	RchiOBHm_Chr4g0410761 RchiOBHm_Chr7g0199071
rosa_laevigata	RLG00000003818 RLG00000008399
rosa_multiflora	Rmu_sc0009499.1_g000004 Rmu_sc0021158.1_g000001
rosa_roxburghii	Rroxscaffold_3G00257150 Rroxscaffold_5G00355510
rosa_rugosa	Rorug04G0111100 Rorug04G0111200 Rorug07G0052400 Rorug07G0052500
rosa_samantha	Rh4AG162900 Rh4BG161700 Rh4BG162100 Rh4CG175700 Rh4DG158600 Rh7AG175800 Rh7BG179000 Rh7CG184900 Rh7DG178600
rosa_wichuraiana	Rw4G013580 Rw7G015420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1428
Acc65I	GGTACC	2 cut(s)	428, 484
AccB1I	GGYRCC	4 cut(s)	428, 484, 1009, 1881
AccB7I	CCANNNNNTGG	2 cut(s)	808, 1019
AccI	GTMKAC	2 cut(s)	1152, 1687
AccII	CGCG	2 cut(s)	176, 287
AciI	CCGC	7 cut(s)	203, 260, 285, 287, 478, 481, 553
AclI	AACGTT	1 cut(s)	1277
AclWI	GGATC	4 cut(s)	67, 643, 1495, 1748
AcoI	YGGCCR	4 cut(s)	52, 159, 2008, 2065
AcsI	RAATTY	3 cut(s)	226, 805, 967
AcuI	CTGAAG	2 cut(s)	360, 1621
AfaI	GTAC	6 cut(s)	302, 314, 347, 430, 486, 1655
AfeI	AGCGCT	1 cut(s)	596
AfiI	CCNNNNNNNGG	8 cut(s)	157, 559, 782, 808, 1019, 1064, 1309, 1520
AflII	CTTAAG	2 cut(s)	1177, 1412
AflIII	ACRYGT	1 cut(s)	1843
AgsI	TTSAA	9 cut(s)	130, 231, 623, 872, 1360, 1550, 1949, 2025, 2103
AjiI	CACGTC	1 cut(s)	58
AjnI	CCWGG	2 cut(s)	1165, 1369
AloI	GAACNNNNNNTCC	4 cut(s)	597, 629, 1019, 1051
AluBI	AGCT	5 cut(s)	307, 707, 1385, 1406, 1554
AluI	AGCT	5 cut(s)	307, 707, 1385, 1406, 1554
Alw21I	GWGCWC	1 cut(s)	1805
Alw26I	GTCTC	1 cut(s)	714
AlwI	GGATC	4 cut(s)	67, 643, 1495, 1748
Aor51HI	AGCGCT	1 cut(s)	596
AoxI	GGCC	6 cut(s)	52, 159, 470, 1203, 2008, 2065
ApeKI	GCWGC	4 cut(s)	835, 913, 1385, 1403
ApoI	RAATTY	3 cut(s)	226, 805, 967
AseI	ATTAAT	2 cut(s)	1104, 1827
Asp700I	GAANNNNTTC	1 cut(s)	2020
Asp718I	GGTACC	2 cut(s)	428, 484
AspLEI	GCGC	2 cut(s)	176, 597
AspS9I	GGNCC	3 cut(s)	470, 662, 1204
AsuC2I	CCSGG	1 cut(s)	561
AsuHPI	GGTGA	9 cut(s)	134, 197, 575, 788, 924, 1262, 1291, 1829, 1970
AsuII	TTCGAA	1 cut(s)	1038
AvaII	GGWCC	1 cut(s)	662
BaeGI	GKGCMC	1 cut(s)	791
BanI	GGYRCC	4 cut(s)	428, 484, 1009, 1881
BbsI	GAAGAC	2 cut(s)	113, 1580
Bbv12I	GWGCWC	1 cut(s)	1805
BbvCI	CCTCAGC	1 cut(s)	474
BbvI	GCAGC	4 cut(s)	822, 925, 1372, 1415
BccI	CCATC	1 cut(s)	857
BceAI	ACGGC	2 cut(s)	146, 2080
BcgI	CGANNNNNNTGC	4 cut(s)	233, 267, 1367, 1401
BciT130I	CCWGG	2 cut(s)	1167, 1371
BciVI	GTATCC	2 cut(s)	725, 2051
BclI	TGATCA	2 cut(s)	1777, 1927
BcnI	CCSGG	1 cut(s)	561
BcoDI	GTCTC	1 cut(s)	714
BfaI	CTAG	1 cut(s)	168
BfoI	RGCGCY	1 cut(s)	598
BfrI	CTTAAG	2 cut(s)	1177, 1412
BfuI	GTATCC	2 cut(s)	725, 2051
BglI	GCCNNNNNGGC	1 cut(s)	478
BisI	GCNGC	6 cut(s)	288, 479, 836, 914, 1386, 1404
BlsI	GCNGC	6 cut(s)	289, 480, 837, 915, 1387, 1405
BmcAI	AGTACT	1 cut(s)	347
Bme1390I	CCNGG	3 cut(s)	561, 1167, 1371
Bme18I	GGWCC	1 cut(s)	662
BmgBI	CACGTC	1 cut(s)	58
BmgT120I	GGNCC	3 cut(s)	470, 662, 1204
BmiI	GGNNCC	8 cut(s)	29, 430, 486, 572, 1011, 1375, 1562, 1883
BmrFI	CCNGG	3 cut(s)	561, 1167, 1371
BmsI	GCATC	8 cut(s)	231, 367, 373, 822, 1063, 1191, 1271, 1631
BpiI	GAAGAC	2 cut(s)	113, 1580
BplI	GAGNNNNNCTC	1 cut(s)	27
BpmI	CTGGAG	2 cut(s)	860, 961
Bpu10I	CCTNAGC	1 cut(s)	474
Bpu14I	TTCGAA	1 cut(s)	1038
BpuEI	CTTGAG	1 cut(s)	1273
BpuMI	CCSGG	1 cut(s)	561
BsaAI	YACGTR	1 cut(s)	312
BsaJI	CCNNGG	5 cut(s)	285, 776, 1166, 1369, 2062
BsaWI	WCCGGW	1 cut(s)	119
BsaXI	ACNNNNNCTCC	4 cut(s)	711, 741, 2011, 2041
Bsc4I	CCNNNNNNNGG	8 cut(s)	157, 559, 782, 808, 1019, 1064, 1309, 1520
Bse1I	ACTGG	5 cut(s)	1252, 1534, 1600, 1772, 2059
BseBI	CCWGG	2 cut(s)	1167, 1371
BseDI	CCNNGG	5 cut(s)	285, 776, 1166, 1369, 2062
BseGI	GGATG	4 cut(s)	837, 1054, 1262, 1780
BseLI	CCNNNNNNNGG	8 cut(s)	157, 559, 782, 808, 1019, 1064, 1309, 1520
BseMII	CTCAG	2 cut(s)	488, 612
BseNI	ACTGG	5 cut(s)	1252, 1534, 1600, 1772, 2059
BseRI	GAGGAG	3 cut(s)	20, 236, 1325
BseSI	GKGCMC	1 cut(s)	791
BseXI	GCAGC	4 cut(s)	822, 925, 1372, 1415
BsgI	GTGCAG	1 cut(s)	1422
Bsh1236I	CGCG	2 cut(s)	176, 287
BshFI	GGCC	6 cut(s)	54, 161, 472, 1205, 2010, 2067
BshNI	GGYRCC	4 cut(s)	428, 484, 1009, 1881
BsiHKAI	GWGCWC	1 cut(s)	1805
BsiSI	CCGG	2 cut(s)	120, 560
BslFI	GGGAC	3 cut(s)	149, 1081, 1758
BslI	CCNNNNNNNGG	8 cut(s)	157, 559, 782, 808, 1019, 1064, 1309, 1520
BsmAI	GTCTC	1 cut(s)	714
BsmFI	GGGAC	3 cut(s)	149, 1081, 1758
BsnI	GGCC	6 cut(s)	54, 161, 472, 1205, 2010, 2067
Bsp119I	TTCGAA	1 cut(s)	1038
Bsp1286I	GDGCHC	2 cut(s)	791, 1805
BspACI	CCGC	7 cut(s)	203, 260, 285, 287, 478, 481, 553
BspANI	GGCC	6 cut(s)	54, 161, 472, 1205, 2010, 2067
BspCNI	CTCAG	2 cut(s)	487, 611
BspFNI	CGCG	2 cut(s)	176, 287
BspLI	GGNNCC	8 cut(s)	29, 430, 486, 572, 1011, 1375, 1562, 1883
BspPI	GGATC	4 cut(s)	67, 643, 1495, 1748
BspQI	GCTCTTC	1 cut(s)	934
BspT104I	TTCGAA	1 cut(s)	1038
BspT107I	GGYRCC	4 cut(s)	428, 484, 1009, 1881
BspTI	CTTAAG	2 cut(s)	1177, 1412
BsrI	ACTGG	5 cut(s)	1252, 1534, 1600, 1772, 2059
BssECI	CCNNGG	5 cut(s)	285, 776, 1166, 1369, 2062
Bst2UI	CCWGG	2 cut(s)	1167, 1371
Bst4CI	ACNGT	6 cut(s)	274, 992, 1474, 1653, 1711, 1725
Bst6I	CTCTTC	3 cut(s)	38, 336, 934
BstAFI	CTTAAG	2 cut(s)	1177, 1412
BstBAI	YACGTR	1 cut(s)	312
BstBI	TTCGAA	1 cut(s)	1038
BstC8I	GCNNGC	2 cut(s)	705, 950
BstDEI	CTNAG	4 cut(s)	138, 474, 598, 1127
BstDSI	CCRYGG	2 cut(s)	285, 2062
BstEII	GGTNACC	1 cut(s)	794
BstENI	CCTNNNNNAGG	1 cut(s)	1307
BstF5I	GGATG	4 cut(s)	837, 1054, 1262, 1780
BstFNI	CGCG	2 cut(s)	176, 287
BstH2I	RGCGCY	1 cut(s)	598
BstHHI	GCGC	2 cut(s)	176, 597
BstMAI	GTCTC	1 cut(s)	714
BstMWI	GCNNNNNNNGC	5 cut(s)	51, 293, 448, 478, 1726
BstNI	CCWGG	2 cut(s)	1167, 1371
BstNSI	RCATGY	1 cut(s)	1847
BstPI	GGTNACC	1 cut(s)	794
BstSCI	CCNGG	3 cut(s)	559, 1165, 1369
BstSLI	GKGCMC	1 cut(s)	791
BstSNI	TACGTA	1 cut(s)	312
BstUI	CGCG	2 cut(s)	176, 287
BstV1I	GCAGC	4 cut(s)	822, 925, 1372, 1415
BstV2I	GAAGAC	2 cut(s)	113, 1580
BstX2I	RGATCY	2 cut(s)	72, 635
BstXI	CCANNNNNNTGG	4 cut(s)	24, 62, 581, 1892
BstYI	RGATCY	2 cut(s)	72, 635
BsuI	GTATCC	2 cut(s)	725, 2051
BsuRI	GGCC	6 cut(s)	54, 161, 472, 1205, 2010, 2067
BtgI	CCRYGG	2 cut(s)	285, 2062
BtrI	CACGTC	1 cut(s)	58
BtsCI	GGATG	4 cut(s)	837, 1054, 1262, 1780
BtsIMutI	CAGTG	4 cut(s)	606, 1593, 1720, 2052
Cac8I	GCNNGC	2 cut(s)	705, 950
CfoI	GCGC	2 cut(s)	176, 597
Cfr13I	GGNCC	3 cut(s)	470, 662, 1204
Cfr42I	CCGCGG	1 cut(s)	288
Csp6I	GTAC	6 cut(s)	301, 313, 346, 429, 485, 1654
CviQI	GTAC	6 cut(s)	301, 313, 346, 429, 485, 1654
DdeI	CTNAG	4 cut(s)	138, 474, 598, 1127
EaeI	YGGCCR	4 cut(s)	52, 159, 2008, 2065
Eam1104I	CTCTTC	3 cut(s)	38, 336, 934
EarI	CTCTTC	3 cut(s)	38, 336, 934
Eco105I	TACGTA	1 cut(s)	312
Eco47I	GGWCC	1 cut(s)	662
Eco47III	AGCGCT	1 cut(s)	596
Eco57I	CTGAAG	2 cut(s)	360, 1621
Eco91I	GGTNACC	1 cut(s)	794
EcoNI	CCTNNNNNAGG	1 cut(s)	1307
EcoO109I	RGGNCCY	2 cut(s)	662, 1204
EcoO65I	GGTNACC	1 cut(s)	794
EcoRI	GAATTC	1 cut(s)	226
EcoRII	CCWGG	2 cut(s)	1165, 1369
FaqI	GGGAC	3 cut(s)	149, 1081, 1758
FauI	CCCGC	1 cut(s)	474
FauNDI	CATATG	1 cut(s)	1658
FbaI	TGATCA	2 cut(s)	1777, 1927
FblI	GTMKAC	2 cut(s)	1152, 1687
Fnu4HI	GCNGC	6 cut(s)	288, 479, 836, 914, 1386, 1404
FokI	GGATG	4 cut(s)	844, 1041, 1249, 1787
Fsp4HI	GCNGC	6 cut(s)	288, 479, 836, 914, 1386, 1404
FspBI	CTAG	1 cut(s)	168
GlaI	GCGC	2 cut(s)	175, 596
GluI	GCNGC	6 cut(s)	288, 479, 836, 914, 1386, 1404
GsuI	CTGGAG	2 cut(s)	860, 961
HaeII	RGCGCY	1 cut(s)	598
HaeIII	GGCC	6 cut(s)	54, 161, 472, 1205, 2010, 2067
HapII	CCGG	2 cut(s)	120, 560
HhaI	GCGC	2 cut(s)	176, 597
Hin6I	GCGC	2 cut(s)	174, 595
HinP1I	GCGC	2 cut(s)	174, 595
HincII	GTYRAC	1 cut(s)	892
HindII	GTYRAC	1 cut(s)	892
HindIII	AAGCTT	1 cut(s)	1552
HpaII	CCGG	2 cut(s)	120, 560
HphI	GGTGA	9 cut(s)	134, 197, 575, 788, 924, 1262, 1291, 1829, 1970
Hpy166II	GTNNAC	3 cut(s)	892, 1153, 1688
Hpy188I	TCNGA	7 cut(s)	115, 649, 777, 1640, 1677, 1740, 1800
Hpy188III	TCNNGA	8 cut(s)	70, 268, 320, 665, 940, 1117, 1350, 1623
Hpy8I	GTNNAC	3 cut(s)	892, 1153, 1688
Hpy99I	CGWCG	1 cut(s)	62
HpyAV	CCTTC	8 cut(s)	498, 756, 807, 1022, 1026, 1735, 1985, 2010
HpyCH4III	ACNGT	6 cut(s)	274, 992, 1474, 1653, 1711, 1725
HpyCH4IV	ACGT	4 cut(s)	57, 311, 1140, 1277
HpyF10VI	GCNNNNNNNGC	5 cut(s)	51, 293, 448, 478, 1726
HpyF3I	CTNAG	4 cut(s)	138, 474, 598, 1127
HpySE526I	ACGT	4 cut(s)	57, 311, 1140, 1277
HspAI	GCGC	2 cut(s)	174, 595
KpnI	GGTACC	2 cut(s)	432, 488
Ksp22I	TGATCA	2 cut(s)	1777, 1927
KspI	CCGCGG	1 cut(s)	288
LguI	GCTCTTC	1 cut(s)	934
LmnI	GCTCC	2 cut(s)	33, 1312
Lsp1109I	GCAGC	4 cut(s)	822, 925, 1372, 1415
LweI	GCATC	8 cut(s)	231, 367, 373, 822, 1063, 1191, 1271, 1631
MaeI	CTAG	1 cut(s)	168
MaeII	ACGT	4 cut(s)	57, 311, 1140, 1277
MaeIII	GTNAC	6 cut(s)	122, 411, 794, 1090, 1297, 1958
MboII	GAAGA	9 cut(s)	25, 118, 154, 250, 353, 409, 921, 1585, 2025
MflI	RGATCY	2 cut(s)	72, 635
MhlI	GDGCHC	2 cut(s)	791, 1805
MlyI	GAGTC	7 cut(s)	75, 352, 1063, 1098, 1171, 1412, 1535
MmeI	TCCRAC	4 cut(s)	43, 709, 1649, 1730
MroXI	GAANNNNTTC	1 cut(s)	2020
MseI	TTAA	8 cut(s)	354, 906, 1104, 1178, 1274, 1413, 1506, 1827
MslI	CAYNNNNRTG	8 cut(s)	1059, 1304, 1661, 1842, 1848, 1869, 1890, 2004
MspA1I	CMGCKG	2 cut(s)	287, 478
MspCI	CTTAAG	2 cut(s)	1177, 1412
MspI	CCGG	2 cut(s)	120, 560
MspR9I	CCNGG	3 cut(s)	561, 1167, 1371
MvaI	CCWGG	2 cut(s)	1167, 1371
MvnI	CGCG	2 cut(s)	176, 287
MwoI	GCNNNNNNNGC	5 cut(s)	51, 293, 448, 478, 1726
NciI	CCSGG	1 cut(s)	561
NdeI	CATATG	1 cut(s)	1658
NlaIV	GGNNCC	8 cut(s)	29, 430, 486, 572, 1011, 1375, 1562, 1883
NmeAIII	GCCGAG	1 cut(s)	1471
NmuCI	GTSAC	5 cut(s)	122, 794, 1090, 1297, 1958
NspI	RCATGY	1 cut(s)	1847
NspV	TTCGAA	1 cut(s)	1038
PciI	ACATGT	1 cut(s)	1843
PciSI	GCTCTTC	1 cut(s)	934
PcsI	WCGNNNNNNNCGW	2 cut(s)	57, 99
PdmI	GAANNNNTTC	1 cut(s)	2020
PfeI	GAWTC	4 cut(s)	6, 116, 1626, 1672
PflMI	CCANNNNNTGG	2 cut(s)	808, 1019
PkrI	GCNGC	6 cut(s)	289, 480, 837, 915, 1387, 1405
PleI	GAGTC	7 cut(s)	74, 352, 1063, 1097, 1170, 1412, 1535
PpsI	GAGTC	7 cut(s)	74, 352, 1063, 1097, 1170, 1412, 1535
Ppu21I	YACGTR	1 cut(s)	312
PpuMI	RGGWCCY	1 cut(s)	662
PscI	ACATGT	1 cut(s)	1843
PshBI	ATTAAT	2 cut(s)	1104, 1827
PsiI	TTATAA	1 cut(s)	1428
Psp1406I	AACGTT	1 cut(s)	1277
Psp5II	RGGWCCY	1 cut(s)	662
Psp6I	CCWGG	2 cut(s)	1165, 1369
PspEI	GGTNACC	1 cut(s)	794
PspGI	CCWGG	2 cut(s)	1165, 1369
PspN4I	GGNNCC	8 cut(s)	29, 430, 486, 572, 1011, 1375, 1562, 1883
PspPI	GGNCC	3 cut(s)	470, 662, 1204
PspPPI	RGGWCCY	1 cut(s)	662
PsrI	GAACNNNNNNTAC	2 cut(s)	2042, 2074
PsuI	RGATCY	2 cut(s)	72, 635
RsaI	GTAC	6 cut(s)	302, 314, 347, 430, 486, 1655
RsaNI	GTAC	6 cut(s)	301, 313, 346, 429, 485, 1654
RseI	CAYNNNNRTG	8 cut(s)	1059, 1304, 1661, 1842, 1848, 1869, 1890, 2004
SacII	CCGCGG	1 cut(s)	288
SapI	GCTCTTC	1 cut(s)	934
SaqAI	TTAA	8 cut(s)	354, 906, 1104, 1178, 1274, 1413, 1506, 1827
SatI	GCNGC	6 cut(s)	288, 479, 836, 914, 1386, 1404
Sau96I	GGNCC	3 cut(s)	470, 662, 1204
ScaI	AGTACT	1 cut(s)	347
SchI	GAGTC	7 cut(s)	75, 352, 1063, 1098, 1171, 1412, 1535
ScrFI	CCNGG	3 cut(s)	561, 1167, 1371
SduI	GDGCHC	2 cut(s)	791, 1805
SfaNI	GCATC	8 cut(s)	231, 367, 373, 822, 1063, 1191, 1271, 1631
Sfr303I	CCGCGG	1 cut(s)	288
SfuI	TTCGAA	1 cut(s)	1038
SgrBI	CCGCGG	1 cut(s)	288
SinI	GGWCC	1 cut(s)	662
SmiMI	CAYNNNNRTG	8 cut(s)	1059, 1304, 1661, 1842, 1848, 1869, 1890, 2004
SmlI	CTYRAG	3 cut(s)	1177, 1288, 1412
SmoI	CTYRAG	3 cut(s)	1177, 1288, 1412
SnaBI	TACGTA	1 cut(s)	312
SsiI	CCGC	7 cut(s)	203, 260, 285, 287, 478, 481, 553
SspI	AATATT	1 cut(s)	742
SspMI	CTAG	1 cut(s)	168
StyD4I	CCNGG	3 cut(s)	559, 1165, 1369
TaaI	ACNGT	6 cut(s)	274, 992, 1474, 1653, 1711, 1725
TaiI	ACGT	4 cut(s)	60, 314, 1143, 1280
TatI	WGTACW	2 cut(s)	345, 1653
TauI	GCSGC	2 cut(s)	290, 481
TfiI	GAWTC	4 cut(s)	6, 116, 1626, 1672
Tru1I	TTAA	8 cut(s)	354, 906, 1104, 1178, 1274, 1413, 1506, 1827
Tru9I	TTAA	8 cut(s)	354, 906, 1104, 1178, 1274, 1413, 1506, 1827
TscAI	CASTG	4 cut(s)	606, 1600, 1720, 2059
TseFI	GTSAC	5 cut(s)	122, 794, 1090, 1297, 1958
TseI	GCWGC	4 cut(s)	835, 913, 1385, 1403
Tsp45I	GTSAC	5 cut(s)	122, 794, 1090, 1297, 1958
TspDTI	ATGAA	9 cut(s)	435, 480, 738, 1312, 1343, 1446, 1579, 1838, 1887
TspRI	CASTG	4 cut(s)	606, 1600, 1720, 2059
Van91I	CCANNNNNTGG	2 cut(s)	808, 1019
Vha464I	CTTAAG	2 cut(s)	1177, 1412
VpaK11BI	GGWCC	1 cut(s)	662
VspI	ATTAAT	2 cut(s)	1104, 1827
XagI	CCTNNNNNAGG	1 cut(s)	1307
XapI	RAATTY	3 cut(s)	226, 805, 967
XceI	RCATGY	1 cut(s)	1847
XcmI	CCANNNNNNNNNTGG	3 cut(s)	21, 1163, 1862
XmiI	GTMKAC	2 cut(s)	1152, 1687
XmnI	GAANNNNTTC	1 cut(s)	2020
XspI	CTAG	1 cut(s)	168
ZrmI	AGTACT	1 cut(s)	347

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.