Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003551

Physical Location & Seq

Genomic Coordinates Forward (+)

14168072 .. 14170049

Gene Structure 1978 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G160900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1092 bp

ATGACTAAGTTTATTTGGGTTGCTCTTGCTCTGTCACTTGCTTTGGTTGTTGGGGTTGCTCAGAGTTTCGACTTCCACGAGAAGGACTTGGCCTCTGAGGACAGCCTGTGGGATTTGTATGAGAGGTGGAGGAGCCATCACACGGTTTCCAGGAGCATTGATGAGAAGCACAAGCGGTTCAATGTATTCAAAGAGAATGTCAAGCATGTCCACAACACTAACAAAGGAGATAAGCCTTACAAGCTGAAGCTGAACAAGTTTGCTGACATGACCAACCATGAGTTCAGGAGCGTTTACGCCGGTTCAAAGGTTAAGCATCATAGGATGCTCCAGGGGGAGCAGCGCGGTGATGGGGGCTTTAGGTATGAAAATGTTGACAGTGTCCCACCCTCTGTTGATTGGAGAAAGAAAGGTGCCGTCACTCCTGTTAAGGATCAAGGCCAGTGTGGTAGTTGCTGGGCATTTTCAACAGTTGTAGCTGTTGAGGGCATTAATCAAATTAAGACCAATAAGCTGGTTTCATTGTCTGAGCAAGAGTTGGTTGACTGTGACACTGAACAAAATCAAGGATGCAATGGAGGGCTAATGGAATTGGCATTTGAGTTCATCAAACGAAAAGGTGGCCTAACAACAGAGACTAATTACCCTTACCGAGCAGAAGATTCAACATGTAATGTTGCAAAGGAAAATGCTCCAGTAGTGTCAATTGATGGTCATGAGAGTGTGCCTGCAAATAACGAGGATGCATTGCTCAAAGCAGCTGCAAACCAACCTATTTCTGTTGCCATAGATGCGGGAGGTTCTGATTTTCAATTCTACTCTGAGGGGGTATTTACTGGACAATGTGGCACAGAGCTTGATCATGGAGTTGCAGTTGTTGGCTATGGAGCAACACTAGATGGAACCAAGTATTGGATAGTGAAGAACTCCTGGGGCCCTGAGTGGGGAGAGAAGGGTTACATAAGGATGGAGCGTGGCGTCTCTGCGAAAGAGGGGCTCTGTGGAATAGCAGTGGAGGCTTCATATCCCGTCAAGAACTCTTCCACCAACCCTAAAGGATCACTTACCTCCTATCTTAAGGATGAACTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005788 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0031974 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0070013 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

364

Amino Acids

40.17

Weight (kDa)

6.03

Isoelectric Point (pI)

25.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003551)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48340 AT3G48350 AT3G48350 AT5G50260
fragaria_vesca	FvH4_5g06770 FvH4_5g06770
malus_domestica	MD06G1161000.v1.1 MD13G1105500.v1.1 MD14G1166600.v1.1 MD16G1105700.v1.1
prunus_persica	Prupe.1G240900_v2.0.a1 Prupe.5G160900_v2.0.a1
pyrus_communis	pycom06g14380 pycom14g13920
rosa_chinensis	RchiOBHm_Chr4g0432451 RchiOBHm_Chr7g0191791
rosa_laevigata	RLG00000004423 RLG00000006841
rosa_multiflora	Rmu_sc0041316.1_g000001 Rmu_ssc0000421.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263520 Rroxscaffold_5G00373930
rosa_rugosa	Rorug04G0259100.1 Rorug04G0259200.1 Rorug04G0259300 Rorug04G0259400 Rorug06G0511400
rosa_samantha	Rh4AG314400 Rh4BG322200 Rh4CG337300 Rh7AG121500 Rh7BG122900 Rh7CG125800
rosa_wichuraiana	Rw4G027340 Rw7G010330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	413
AccB7I	CCANNNNNTGG	1 cut(s)	912
AccII	CGCG	1 cut(s)	345
AciI	CCGC	3 cut(s)	175, 345, 794
AclWI	GGATC	2 cut(s)	441, 1066
AcuI	CTGAAG	1 cut(s)	266
AcyI	GRCGYC	1 cut(s)	978
AfiI	CCNNNNNNNGG	5 cut(s)	82, 142, 912, 943, 944
AflII	CTTAAG	1 cut(s)	1076
AflIII	ACRYGT	1 cut(s)	668
AgsI	TTSAA	6 cut(s)	181, 190, 306, 468, 666, 812
AjnI	CCWGG	3 cut(s)	149, 330, 929
AjuI	GAANNNNNNNTTGG	4 cut(s)	266, 298, 895, 927
AluBI	AGCT	6 cut(s)	244, 250, 479, 514, 761, 856
AluI	AGCT	6 cut(s)	244, 250, 479, 514, 761, 856
Alw26I	GTCTC	2 cut(s)	629, 985
AlwI	GGATC	2 cut(s)	441, 1066
AoxI	GGCC	4 cut(s)	90, 439, 622, 934
ApaI	GGGCCC	1 cut(s)	938
ApeKI	GCWGC	3 cut(s)	340, 758, 761
ArsI	GACNNNNNNTTYG	2 cut(s)	183, 215
AseI	ATTAAT	1 cut(s)	492
AspLEI	GCGC	1 cut(s)	345
AspS9I	GGNCC	2 cut(s)	934, 935
AsuHPI	GGTGA	1 cut(s)	359
BaeGI	GKGCMC	1 cut(s)	938
BanI	GGYRCC	1 cut(s)	413
BanII	GRGCYC	2 cut(s)	938, 999
BauI	CACGAG	1 cut(s)	77
BbvI	GCAGC	3 cut(s)	352, 748, 770
BccI	CCATC	5 cut(s)	144, 344, 704, 893, 961
BceAI	ACGGC	1 cut(s)	401
BciT130I	CCWGG	3 cut(s)	151, 332, 931
BclI	TGATCA	1 cut(s)	859
BcoDI	GTCTC	2 cut(s)	629, 985
BfaI	CTAG	1 cut(s)	896
BfrI	CTTAAG	1 cut(s)	1076
BisI	GCNGC	3 cut(s)	341, 759, 762
BlsI	GCNGC	3 cut(s)	342, 760, 763
Bme1390I	CCNGG	3 cut(s)	151, 332, 931
BmgT120I	GGNCC	2 cut(s)	934, 935
BmiI	GGNNCC	5 cut(s)	134, 415, 904, 935, 936
BmrFI	CCNGG	3 cut(s)	151, 332, 931
BmsI	GCATC	5 cut(s)	315, 325, 560, 733, 781
BpmI	CTGGAG	2 cut(s)	314, 678
BsaHI	GRCGYC	1 cut(s)	978
BsaJI	CCNNGG	2 cut(s)	331, 930
BsaXI	ACNNNNNCTCC	2 cut(s)	858, 888
Bsc4I	CCNNNNNNNGG	5 cut(s)	82, 142, 912, 943, 944
Bse118I	RCCGGY	1 cut(s)	299
Bse1I	ACTGG	3 cut(s)	442, 695, 841
Bse3DI	GCAATG	2 cut(s)	580, 746
BseBI	CCWGG	3 cut(s)	151, 332, 931
BseDI	CCNNGG	2 cut(s)	331, 930
BseGI	GGATG	5 cut(s)	330, 575, 748, 972, 1087
BseLI	CCNNNNNNNGG	5 cut(s)	82, 142, 912, 943, 944
BseMI	GCAATG	2 cut(s)	580, 746
BseMII	CTCAG	5 cut(s)	74, 87, 519, 813, 930
BseNI	ACTGG	3 cut(s)	442, 695, 841
BseRI	GAGGAG	1 cut(s)	145
BseSI	GKGCMC	1 cut(s)	938
BseXI	GCAGC	3 cut(s)	352, 748, 770
BseYI	CCCAGC	1 cut(s)	456
Bsh1236I	CGCG	1 cut(s)	345
BshFI	GGCC	4 cut(s)	92, 441, 624, 936
BshNI	GGYRCC	1 cut(s)	413
BsiSI	CCGG	1 cut(s)	300
BslFI	GGGAC	1 cut(s)	368
BslI	CCNNNNNNNGG	5 cut(s)	82, 142, 912, 943, 944
BsmAI	GTCTC	2 cut(s)	629, 985
BsmBI	CGTCTC	1 cut(s)	985
BsmFI	GGGAC	1 cut(s)	368
BsnI	GGCC	4 cut(s)	92, 441, 624, 936
Bsp120I	GGGCCC	1 cut(s)	934
Bsp1286I	GDGCHC	2 cut(s)	938, 999
Bsp143I	GATC	3 cut(s)	433, 859, 1058
BspACI	CCGC	3 cut(s)	175, 345, 794
BspANI	GGCC	4 cut(s)	92, 441, 624, 936
BspCNI	CTCAG	5 cut(s)	73, 88, 520, 814, 931
BspFNI	CGCG	1 cut(s)	345
BspHI	TCATGA	1 cut(s)	715
BspLI	GGNNCC	5 cut(s)	134, 415, 904, 935, 936
BspPI	GGATC	2 cut(s)	441, 1066
BspT107I	GGYRCC	1 cut(s)	413
BspTI	CTTAAG	1 cut(s)	1076
BsrDI	GCAATG	2 cut(s)	580, 746
BsrFI	RCCGGY	1 cut(s)	299
BsrI	ACTGG	3 cut(s)	442, 695, 841
BssAI	RCCGGY	1 cut(s)	299
BssECI	CCNNGG	2 cut(s)	331, 930
BssMI	GATC	3 cut(s)	433, 859, 1058
BssNI	GRCGYC	1 cut(s)	978
BssSI	CACGAG	1 cut(s)	77
Bst2BI	CACGAG	1 cut(s)	77
Bst2UI	CCWGG	3 cut(s)	151, 332, 931
Bst4CI	ACNGT	4 cut(s)	145, 380, 472, 548
Bst6I	CTCTTC	1 cut(s)	1045
BstACI	GRCGYC	1 cut(s)	978
BstAFI	CTTAAG	1 cut(s)	1076
BstC8I	GCNNGC	1 cut(s)	729
BstDEI	CTNAG	6 cut(s)	6, 60, 96, 528, 822, 939
BstF5I	GGATG	5 cut(s)	330, 575, 748, 972, 1087
BstFNI	CGCG	1 cut(s)	345
BstHHI	GCGC	1 cut(s)	345
BstKTI	GATC	3 cut(s)	436, 862, 1061
BstMAI	GTCTC	2 cut(s)	629, 985
BstMBI	GATC	3 cut(s)	433, 859, 1058
BstMWI	GCNNNNNNNGC	3 cut(s)	241, 791, 1016
BstNI	CCWGG	3 cut(s)	151, 332, 931
BstNSI	RCATGY	2 cut(s)	209, 672
BstSCI	CCNGG	3 cut(s)	149, 330, 929
BstSLI	GKGCMC	1 cut(s)	938
BstUI	CGCG	1 cut(s)	345
BstV1I	GCAGC	3 cut(s)	352, 748, 770
BstXI	CCANNNNNNTGG	1 cut(s)	514
BsuRI	GGCC	4 cut(s)	92, 441, 624, 936
BtsCI	GGATG	5 cut(s)	330, 575, 748, 972, 1087
BtsI	GCAGTG	1 cut(s)	1017
BtsIMutI	CAGTG	4 cut(s)	385, 449, 552, 1017
Cac8I	GCNNGC	1 cut(s)	729
CciI	TCATGA	1 cut(s)	715
CfoI	GCGC	1 cut(s)	345
Cfr10I	RCCGGY	1 cut(s)	299
Cfr13I	GGNCC	2 cut(s)	934, 935
CseI	GACGC	1 cut(s)	967
CviAII	CATG	6 cut(s)	206, 268, 278, 669, 716, 863
DdeI	CTNAG	6 cut(s)	6, 60, 96, 528, 822, 939
DpnI	GATC	3 cut(s)	435, 861, 1060
DpnII	GATC	3 cut(s)	433, 859, 1058
Eam1104I	CTCTTC	1 cut(s)	1045
EarI	CTCTTC	1 cut(s)	1045
Eco24I	GRGCYC	2 cut(s)	938, 999
Eco57I	CTGAAG	1 cut(s)	266
EcoO109I	RGGNCCY	2 cut(s)	934, 935
EcoRII	CCWGG	3 cut(s)	149, 330, 929
EcoT22I	ATGCAT	1 cut(s)	748
EcoT38I	GRGCYC	2 cut(s)	938, 999
Esp3I	CGTCTC	1 cut(s)	985
FaeI	CATG	6 cut(s)	209, 271, 281, 672, 719, 866
FalI	AAGNNNNNCTT	2 cut(s)	1047, 1079
FaqI	GGGAC	1 cut(s)	368
FatI	CATG	6 cut(s)	205, 267, 277, 668, 715, 862
FauI	CCCGC	1 cut(s)	787
FbaI	TGATCA	1 cut(s)	859
Fnu4HI	GCNGC	3 cut(s)	341, 759, 762
FokI	GGATG	4 cut(s)	337, 582, 755, 979
FriOI	GRGCYC	2 cut(s)	938, 999
Fsp4HI	GCNGC	3 cut(s)	341, 759, 762
FspBI	CTAG	1 cut(s)	896
GlaI	GCGC	1 cut(s)	344
GluI	GCNGC	3 cut(s)	341, 759, 762
GsaI	CCCAGC	1 cut(s)	460
GsuI	CTGGAG	2 cut(s)	314, 678
HaeIII	GGCC	4 cut(s)	92, 441, 624, 936
HapII	CCGG	1 cut(s)	300
HgaI	GACGC	1 cut(s)	967
HhaI	GCGC	1 cut(s)	345
Hin1I	GRCGYC	1 cut(s)	978
Hin1II	CATG	6 cut(s)	209, 271, 281, 672, 719, 866
Hin6I	GCGC	1 cut(s)	343
HinP1I	GCGC	1 cut(s)	343
HincII	GTYRAC	2 cut(s)	376, 544
HindII	GTYRAC	2 cut(s)	376, 544
HinfI	GANTC	1 cut(s)	662
HpaII	CCGG	1 cut(s)	300
HphI	GGTGA	1 cut(s)	359
Hpy166II	GTNNAC	4 cut(s)	211, 295, 376, 544
Hpy188I	TCNGA	5 cut(s)	63, 97, 529, 805, 823
Hpy188III	TCNNGA	3 cut(s)	286, 716, 1033
Hpy8I	GTNNAC	4 cut(s)	211, 295, 376, 544
HpyAV	CCTTC	2 cut(s)	76, 946
HpyCH4III	ACNGT	4 cut(s)	145, 380, 472, 548
HpyCH4V	TGCA	6 cut(s)	573, 680, 731, 746, 764, 872
HpyF10VI	GCNNNNNNNGC	3 cut(s)	241, 791, 1016
HpyF3I	CTNAG	6 cut(s)	6, 60, 96, 528, 822, 939
Hsp92I	GRCGYC	1 cut(s)	978
Hsp92II	CATG	6 cut(s)	209, 271, 281, 672, 719, 866
HspAI	GCGC	1 cut(s)	343
Ksp22I	TGATCA	1 cut(s)	859
Kzo9I	GATC	3 cut(s)	433, 859, 1058
LmnI	GCTCC	8 cut(s)	132, 153, 288, 333, 337, 697, 887, 970
Lsp1109I	GCAGC	3 cut(s)	352, 748, 770
LweI	GCATC	5 cut(s)	315, 325, 560, 733, 781
MaeI	CTAG	1 cut(s)	896
MaeIII	GTNAC	4 cut(s)	33, 418, 548, 956
MalI	GATC	3 cut(s)	435, 861, 1060
MboI	GATC	3 cut(s)	433, 859, 1058
MboII	GAAGA	3 cut(s)	671, 934, 1032
MfeI	CAATTG	1 cut(s)	705
MhlI	GDGCHC	2 cut(s)	938, 999
MluCI	AATT	5 cut(s)	498, 590, 640, 705, 812
Mph1103I	ATGCAT	1 cut(s)	748
MseI	TTAA	5 cut(s)	312, 429, 492, 501, 1077
MslI	CAYNNNNRTG	2 cut(s)	720, 965
MspA1I	CMGCKG	1 cut(s)	761
MspCI	CTTAAG	1 cut(s)	1076
MspI	CCGG	1 cut(s)	300
MspR9I	CCNGG	3 cut(s)	151, 332, 931
MunI	CAATTG	1 cut(s)	705
MvaI	CCWGG	3 cut(s)	151, 332, 931
MvnI	CGCG	1 cut(s)	345
MwoI	GCNNNNNNNGC	3 cut(s)	241, 791, 1016
NdeII	GATC	3 cut(s)	433, 859, 1058
NlaIII	CATG	6 cut(s)	209, 271, 281, 672, 719, 866
NlaIV	GGNNCC	5 cut(s)	134, 415, 904, 935, 936
NmuCI	GTSAC	3 cut(s)	33, 418, 548
NsiI	ATGCAT	1 cut(s)	748
NspI	RCATGY	2 cut(s)	209, 672
PagI	TCATGA	1 cut(s)	715
PciI	ACATGT	1 cut(s)	668
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PfeI	GAWTC	1 cut(s)	662
PflFI	GACNNNGTC	1 cut(s)	380
PflMI	CCANNNNNTGG	1 cut(s)	912
PfoI	TCCNGGA	1 cut(s)	149
PkrI	GCNGC	3 cut(s)	342, 760, 763
PscI	ACATGT	1 cut(s)	668
PshBI	ATTAAT	1 cut(s)	492
Psp6I	CCWGG	3 cut(s)	149, 330, 929
PspFI	CCCAGC	1 cut(s)	456
PspGI	CCWGG	3 cut(s)	149, 330, 929
PspN4I	GGNNCC	5 cut(s)	134, 415, 904, 935, 936
PspOMI	GGGCCC	1 cut(s)	934
PspPI	GGNCC	2 cut(s)	934, 935
PsyI	GACNNNGTC	1 cut(s)	380
PvuII	CAGCTG	1 cut(s)	761
RseI	CAYNNNNRTG	2 cut(s)	720, 965
SaqAI	TTAA	5 cut(s)	312, 429, 492, 501, 1077
SatI	GCNGC	3 cut(s)	341, 759, 762
Sau3AI	GATC	3 cut(s)	433, 859, 1058
Sau96I	GGNCC	2 cut(s)	934, 935
ScrFI	CCNGG	3 cut(s)	151, 332, 931
SduI	GDGCHC	2 cut(s)	938, 999
SfaNI	GCATC	5 cut(s)	315, 325, 560, 733, 781
SmiMI	CAYNNNNRTG	2 cut(s)	720, 965
SmlI	CTYRAG	1 cut(s)	1076
SmoI	CTYRAG	1 cut(s)	1076
Sse9I	AATT	5 cut(s)	498, 590, 640, 705, 812
SsiI	CCGC	3 cut(s)	175, 345, 794
SspMI	CTAG	1 cut(s)	896
StyD4I	CCNGG	3 cut(s)	149, 330, 929
TaaI	ACNGT	4 cut(s)	145, 380, 472, 548
TaqI	TCGA	1 cut(s)	69
TasI	AATT	5 cut(s)	498, 590, 640, 705, 812
TfiI	GAWTC	1 cut(s)	662
Tru1I	TTAA	5 cut(s)	312, 429, 492, 501, 1077
Tru9I	TTAA	5 cut(s)	312, 429, 492, 501, 1077
TscAI	CASTG	4 cut(s)	385, 449, 559, 1017
TseFI	GTSAC	3 cut(s)	33, 418, 548
TseI	GCWGC	3 cut(s)	340, 758, 761
Tsp45I	GTSAC	3 cut(s)	33, 418, 548
TspDTI	ATGAA	4 cut(s)	381, 510, 595, 1011
TspRI	CASTG	4 cut(s)	385, 449, 559, 1017
Tth111I	GACNNNGTC	1 cut(s)	380
Van91I	CCANNNNNTGG	1 cut(s)	912
Vha464I	CTTAAG	1 cut(s)	1076
VspI	ATTAAT	1 cut(s)	492
XceI	RCATGY	2 cut(s)	209, 672
XspI	CTAG	1 cut(s)	896
Zsp2I	ATGCAT	1 cut(s)	748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.