Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003551

Physical Location & Seq

Genomic Coordinates Forward (+)

62617777 .. 62624942

Gene Structure 7166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0511400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGCCATTTGTTGTTGAGGGAATCGACTTGGATTTACGTATGCGTGGTTTTGAGTTTTTTAGCTTGGTATCTTCTTATCCCTTTGATTCTCCGAAACCCATGCATTTGAAAGCAACAGGGAAGATCAAGTTTCAGGGAAAGGTTTTAAAGCCTTTTAGTATTTCTAATGGACAAGAATTTGGTTCCGAGAGAAATAAGCAACAGGTGAATATGACAGATACAGGAAAGACAGATAGTCTCGTAGGAGAGGTTTCAATTTCGGGTCTCAAATTGAATCAGTTGATGTTGGTCCCTCAGTTGGCTGGATCGTTGAGCATTTCACGTGAGTGTATCAAGATACGTCAGTTACCACTCGATGAGTTGGAATTAGCTTCGCTCCGTGGAACAATACAAAAGGCAGAAATTCAGCTTAATCTTCAGAAACGAAGAGGTCATGGGCTGCTATCTGTACTTCGGCCAAAGTTTAGCGGTGTACTAGGTGAAGCCCTTGATGTGGCTGCTAGATGGAGTGGGGATGTTATCACTGTTGAGAAAACCGTCTTGGAGCAAAGCAATAGTCGTTATGAGCTTCAGGGTGAATATGTATTGCCTGGCAGTCGAGATCGCAACCCTGCTGAGAAGGAAAGGGGAGGTTTATTGAAAAGAGCGATGGCTGGGAATCTGGGTAGTGTCATATCTTCTATGGGAAGGTGGAGAATGAGACTGGAAGTTCCTAGAGCTGAGGTTGCTGAGATGCTTCCCCTTGCCAGACTTGTTTCTCGAAGTACAGATCCCGCTGTTCACTCAAGATCAAAGTACCTGTTTGTTCAAAGCTTGCAGTCGGTTGGATTATATACAGAAAGTCTGAAAGAACTGCTTGAGGTTATACGGGGACATTATACCCCATTAAATGAAGTTATTCTGGAAGATGATCTTCCAGGTTTAACTGAGCTCAGAGGTAGCTGGCATGGCTCTCTTGATGCAAGCGGAGGTGGCAATGGGGACACAATGGCAGAATTTGATTTTCATGGGGATGACTGGGAGTGGGGAACCTACAAAACTCAGCGCGTTCTGGCAGTAGGTGCATACAGCAATGATGATGGTTTGCGCCTGGAAAAGATCTTTATTCAGAAAGACAACGCCACAGTCCATGCAGATGGGACTTTGTTAGGGCCGAAAACAAATCTACACTTTGCTGTTTTGAACTTTCCTGTTAGTCTAGTTCCCACTGTGATTCAGGTCATTGAATCTTCTGCTACTGATGATGTTCAATCTCTACGGCAATTTTTAGCACCAATTAGAGGCATACTGCACATGGAAGGCGATCTTAGAGGGAGTCTTGTGAAACCAGAATGTGATGTGCAAGTCAGGCTCCTGGATGGTGCCGTTGGGGGGATTGATCTTGGACGAGCTGAAACTGTTGCTTCCCTCACCTCAACCAGTCGTTTTCTGTTCAATGCAAAATTTGAACCAATCATCCAAACTGGGCATGTACACATTCAGGGAAGCATACCTGTTACTTTTGTTCAGAATAACATGTTAGAGGAAGAAGATTTAGAAAAAGATAAAAGCCGAGCTACTTCCTGGGACCATGGTTGGGTGAAGGAAAGAGGCAGGGGGTCTAGCGATGATGCCAGTGAAAAGAAACTTCCAAGAGAGAGGAATGAAGAAGGCTGGGATACGGGATTAGCTGAAAGCCTTAAAGGTTTAAACTGGAACATATTAGATGTAGGGGAAGTCAGAATAGATGCTGATATAAAAGATGGGGGCATGATGATGTTAACTGCTTTATCTCCTTATGCTAAATGGCTTCAGGGCAATGCCGACATCATGCTTCAGGTCAGAGGCACAGTTGAACAACCAGTGCTGGATGGATATGCATCCTTCCACAGGGCATCTATATCATCACCGGTTCTCTGGAAACCACTTACAAATTTCGGTGGCACAGTTCATGTGAAATCAAATAGGTTATGCATCACTTCATTGGAGAGTAGAGTAAGTAGAAGGGGTAAGCTGTTTGTCAAGGGCAACCTGCCCCTTCAAACAAGTGAAGCATCCCTTGGAGATAAAATTGACTTGAAATGTGAAGTTCTGGAAGTGCGGGCAAAAAATATTTTAAGGATTGATGAGAACATGGAAGACACATTGGCAAATGTAGAGGGTGCACAAGGGCAACTGCTCAAGTATATGAATAGCATATCATCAAATAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000323 GO:0000325 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005783 GO:0005788 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0008152 GO:0008219 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009505 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009626 GO:0009791 GO:0009908 GO:0009987 GO:0010623 GO:0012501 GO:0012505 GO:0016787 GO:0019538 GO:0022414 GO:0030154 GO:0030163 GO:0030312 GO:0031974 GO:0032501 GO:0032502 GO:0033554 GO:0034050 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048468 GO:0048608 GO:0048653 GO:0048658 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070011 GO:0070013 GO:0071704 GO:0071944 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

730

Amino Acids

80.73

Weight (kDa)

6.05

Isoelectric Point (pI)

39.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SNARE	PF05739	698 - 730	3.6e-07	SNARE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003551)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48340 AT3G48350 AT3G48350 AT5G50260
fragaria_vesca	FvH4_5g06770 FvH4_5g06770
malus_domestica	MD06G1161000.v1.1 MD13G1105500.v1.1 MD14G1166600.v1.1 MD16G1105700.v1.1
prunus_persica	Prupe.1G240900_v2.0.a1 Prupe.5G160900_v2.0.a1
pyrus_communis	pycom06g14380 pycom14g13920
rosa_chinensis	RchiOBHm_Chr4g0432451 RchiOBHm_Chr7g0191791
rosa_laevigata	RLG00000004423 RLG00000006841
rosa_multiflora	Rmu_sc0041316.1_g000001 Rmu_ssc0000421.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263520 Rroxscaffold_5G00373930
rosa_rugosa	Rorug04G0259100.1 Rorug04G0259200.1 Rorug04G0259300 Rorug04G0259400 Rorug06G0511400
rosa_samantha	Rh4AG314400 Rh4BG322200 Rh4CG337300 Rh7AG121500 Rh7BG122900 Rh7CG125800
rosa_wichuraiana	Rw4G027340 Rw7G010330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2019
AccB1I	GGYRCC	1 cut(s)	1361
AccII	CGCG	1 cut(s)	1047
AciI	CCGC	4 cut(s)	468, 774, 966, 2080
AclWI	GGATC	2 cut(s)	313, 764
AcoI	YGGCCR	1 cut(s)	455
AcsI	RAATTY	5 cut(s)	176, 402, 995, 1442, 1912
AcuI	CTGAAG	4 cut(s)	401, 554, 1775, 1799
AcvI	CACGTG	1 cut(s)	323
AfaI	GTAC	5 cut(s)	450, 474, 766, 797, 1473
AfiI	CCNNNNNNNGG	6 cut(s)	298, 493, 1280, 1371, 1576, 1869
AflIII	ACRYGT	1 cut(s)	1515
AgeI	ACCGGT	1 cut(s)	1888
AhdI	GACNNNNNGTC	1 cut(s)	234
AjnI	CCWGG	5 cut(s)	589, 916, 1089, 1353, 1562
AjuI	GAANNNNNNNTTGG	4 cut(s)	524, 556, 2022, 2054
AleI	CACNNNNGTG	1 cut(s)	325
AloI	GAACNNNNNNTCC	2 cut(s)	1440, 1472
Alw21I	GWGCWC	2 cut(s)	933, 2146
Alw26I	GTCTC	3 cut(s)	242, 269, 694
Alw44I	GTGCAC	1 cut(s)	2142
AlwI	GGATC	2 cut(s)	313, 764
AoxI	GGCC	2 cut(s)	455, 1151
ApaLI	GTGCAC	1 cut(s)	2142
ApeKI	GCWGC	2 cut(s)	439, 497
ApoI	RAATTY	5 cut(s)	176, 402, 995, 1442, 1912
ArsI	GACNNNNNNTTYG	2 cut(s)	541, 573
AsiGI	ACCGGT	1 cut(s)	1888
Asp700I	GAANNNNTTC	1 cut(s)	897
AspLEI	GCGC	2 cut(s)	1047, 1089
AspS9I	GGNCC	3 cut(s)	289, 1151, 1567
AsuHPI	GGTGA	6 cut(s)	217, 491, 587, 1402, 1591, 1878
AvaII	GGWCC	2 cut(s)	289, 1567
BaeGI	GKGCMC	1 cut(s)	2146
BaeI	ACNNNNGTAYC	2 cut(s)	329, 362
BanI	GGYRCC	1 cut(s)	1361
BanII	GRGCYC	1 cut(s)	933
BbrPI	CACGTG	1 cut(s)	323
BbsI	GAAGAC	1 cut(s)	2124
Bbv12I	GWGCWC	2 cut(s)	933, 2146
BbvCI	CCTCAGC	1 cut(s)	720
BbvI	GCAGC	2 cut(s)	426, 484
BccI	CCATC	7 cut(s)	498, 643, 1073, 1130, 1352, 1736, 1844
BceAI	ACGGC	2 cut(s)	1274, 1349
BcgI	CGANNNNNNTGC	2 cut(s)	82, 116
BciT130I	CCWGG	5 cut(s)	591, 918, 1091, 1355, 1564
BciVI	GTATCC	1 cut(s)	1651
BcoDI	GTCTC	3 cut(s)	242, 269, 694
BfaI	CTAG	5 cut(s)	476, 501, 714, 1199, 1602
BfuAI	ACCTGC	1 cut(s)	2019
BfuI	GTATCC	1 cut(s)	1651
BglII	AGATCT	1 cut(s)	1098
BisI	GCNGC	2 cut(s)	440, 498
BlsI	GCNGC	2 cut(s)	441, 499
Bme1390I	CCNGG	5 cut(s)	591, 918, 1091, 1355, 1564
Bme18I	GGWCC	2 cut(s)	289, 1567
BmeRI	GACNNNNNGTC	1 cut(s)	234
BmgT120I	GGNCC	3 cut(s)	289, 1151, 1567
BmiI	GGNNCC	6 cut(s)	184, 291, 1030, 1352, 1363, 1568
BmrFI	CCNGG	5 cut(s)	591, 918, 1091, 1355, 1564
BmrI	ACTGGG	2 cut(s)	1027, 1473
BmsI	GCATC	8 cut(s)	723, 949, 1600, 1717, 1868, 1883, 1962, 2042
BmuI	ACTGGG	2 cut(s)	1027, 1473
BpiI	GAAGAC	1 cut(s)	2124
Bpu10I	CCTNAGC	1 cut(s)	720
BpuEI	CTTGAG	3 cut(s)	769, 878, 2144
BsaAI	YACGTR	2 cut(s)	38, 323
BsaBI	GATNNNNATC	1 cut(s)	1858
BsaI	GGTCTC	1 cut(s)	269
BsaJI	CCNNGG	4 cut(s)	379, 1563, 1570, 2038
BsaWI	WCCGGW	1 cut(s)	1888
Bsc4I	CCNNNNNNNGG	6 cut(s)	298, 493, 1280, 1371, 1576, 1869
Bse118I	RCCGGY	1 cut(s)	1888
Bse1I	ACTGG	7 cut(s)	708, 1022, 1419, 1468, 1614, 1697, 1841
Bse3DI	GCAATG	3 cut(s)	982, 1078, 1804
Bse8I	GATNNNNATC	1 cut(s)	1858
BseBI	CCWGG	5 cut(s)	591, 918, 1091, 1355, 1564
BseDI	CCNNGG	4 cut(s)	379, 1563, 1570, 2038
BseGI	GGATG	7 cut(s)	520, 1018, 1363, 1455, 1855, 1859, 2033
BseJI	GATNNNNATC	1 cut(s)	1858
BseLI	CCNNNNNNNGG	6 cut(s)	298, 493, 1280, 1371, 1576, 1869
BseMI	GCAATG	3 cut(s)	982, 1078, 1804
BseMII	CTCAG	7 cut(s)	308, 606, 711, 720, 918, 946, 1055
BseNI	ACTGG	7 cut(s)	708, 1022, 1419, 1468, 1614, 1697, 1841
BseSI	GKGCMC	1 cut(s)	2146
BseXI	GCAGC	2 cut(s)	426, 484
BseYI	CCCAGC	2 cut(s)	653, 1653
BsgI	GTGCAG	1 cut(s)	1274
Bsh1236I	CGCG	1 cut(s)	1047
BshFI	GGCC	2 cut(s)	457, 1153
BshNI	GGYRCC	1 cut(s)	1361
BshTI	ACCGGT	1 cut(s)	1888
BsiHKAI	GWGCWC	2 cut(s)	933, 2146
BsiSI	CCGG	1 cut(s)	1889
BslFI	GGGAC	5 cut(s)	275, 885, 995, 1153, 1580
BslI	CCNNNNNNNGG	6 cut(s)	298, 493, 1280, 1371, 1576, 1869
BsmAI	GTCTC	3 cut(s)	242, 269, 694
BsmFI	GGGAC	5 cut(s)	275, 885, 995, 1153, 1580
BsnI	GGCC	2 cut(s)	457, 1153
Bso31I	GGTCTC	1 cut(s)	269
Bsp1286I	GDGCHC	2 cut(s)	933, 2146
Bsp1407I	TGTACA	1 cut(s)	1471
Bsp143I	GATC	9 cut(s)	123, 305, 601, 769, 788, 910, 1098, 1303, 1378
Bsp19I	CCATGG	1 cut(s)	1570
BspACI	CCGC	4 cut(s)	468, 774, 966, 2080
BspANI	GGCC	2 cut(s)	457, 1153
BspCNI	CTCAG	7 cut(s)	307, 607, 712, 721, 919, 945, 1054
BspFNI	CGCG	1 cut(s)	1047
BspLI	GGNNCC	6 cut(s)	184, 291, 1030, 1352, 1363, 1568
BspMI	ACCTGC	1 cut(s)	2019
BspPI	GGATC	2 cut(s)	313, 764
BspT107I	GGYRCC	1 cut(s)	1361
BspTNI	GGTCTC	1 cut(s)	269
BsrDI	GCAATG	3 cut(s)	982, 1078, 1804
BsrFI	RCCGGY	1 cut(s)	1888
BsrGI	TGTACA	1 cut(s)	1471
BsrI	ACTGG	7 cut(s)	708, 1022, 1419, 1468, 1614, 1697, 1841
BssAI	RCCGGY	1 cut(s)	1888
BssECI	CCNNGG	4 cut(s)	379, 1563, 1570, 2038
BssMI	GATC	9 cut(s)	123, 305, 601, 769, 788, 910, 1098, 1303, 1378
BssT1I	CCWWGG	2 cut(s)	1570, 2038
Bst2UI	CCWGG	5 cut(s)	591, 918, 1091, 1355, 1564
Bst4CI	ACNGT	7 cut(s)	526, 538, 1126, 1210, 1399, 1831, 1927
Bst6I	CTCTTC	1 cut(s)	421
BstAPI	GCANNNNNTGC	1 cut(s)	1061
BstAUI	TGTACA	1 cut(s)	1471
BstBAI	YACGTR	2 cut(s)	38, 323
BstC8I	GCNNGC	4 cut(s)	815, 944, 964, 2082
BstDEI	CTNAG	8 cut(s)	294, 615, 720, 729, 927, 932, 1041, 1307
BstDSI	CCRYGG	2 cut(s)	379, 1570
BstENI	CCTNNNNNAGG	1 cut(s)	1867
BstF5I	GGATG	7 cut(s)	520, 1018, 1363, 1455, 1855, 1859, 2033
BstFNI	CGCG	1 cut(s)	1047
BstHHI	GCGC	2 cut(s)	1047, 1089
BstKTI	GATC	9 cut(s)	126, 308, 604, 772, 791, 913, 1101, 1306, 1381
BstMAI	GTCTC	3 cut(s)	242, 269, 694
BstMBI	GATC	9 cut(s)	123, 305, 601, 769, 788, 910, 1098, 1303, 1378
BstMWI	GCNNNNNNNGC	5 cut(s)	725, 948, 972, 1061, 1348
BstNI	CCWGG	5 cut(s)	591, 918, 1091, 1355, 1564
BstNSI	RCATGY	2 cut(s)	1472, 1519
BstSCI	CCNGG	5 cut(s)	589, 916, 1089, 1353, 1562
BstSLI	GKGCMC	1 cut(s)	2146
BstSNI	TACGTA	1 cut(s)	38
BstUI	CGCG	1 cut(s)	1047
BstV1I	GCAGC	2 cut(s)	426, 484
BstV2I	GAAGAC	1 cut(s)	2124
BstX2I	RGATCY	2 cut(s)	769, 1098
BstXI	CCANNNNNNTGG	1 cut(s)	1136
BstYI	RGATCY	2 cut(s)	769, 1098
BsuI	GTATCC	1 cut(s)	1651
BsuRI	GGCC	2 cut(s)	457, 1153
BtgI	CCRYGG	2 cut(s)	379, 1570
BtgZI	GCGATG	2 cut(s)	662, 1620
BtsCI	GGATG	7 cut(s)	520, 1018, 1363, 1455, 1855, 1859, 2033
BtsIMutI	CAGTG	4 cut(s)	522, 1206, 1621, 1848
BveI	ACCTGC	1 cut(s)	2019
Cac8I	GCNNGC	4 cut(s)	815, 944, 964, 2082
CfoI	GCGC	2 cut(s)	1047, 1089
Cfr10I	RCCGGY	1 cut(s)	1888
Cfr13I	GGNCC	3 cut(s)	289, 1151, 1567
Csp6I	GTAC	5 cut(s)	449, 473, 765, 796, 1472
CspAI	ACCGGT	1 cut(s)	1888
CviQI	GTAC	5 cut(s)	449, 473, 765, 796, 1472
DdeI	CTNAG	8 cut(s)	294, 615, 720, 729, 927, 932, 1041, 1307
DpnI	GATC	9 cut(s)	125, 307, 603, 771, 790, 912, 1100, 1305, 1380
DpnII	GATC	9 cut(s)	123, 305, 601, 769, 788, 910, 1098, 1303, 1378
DraI	TTTAAA	2 cut(s)	147, 1689
DriI	GACNNNNNGTC	1 cut(s)	234
EaeI	YGGCCR	1 cut(s)	455
Eam1104I	CTCTTC	1 cut(s)	421
Eam1105I	GACNNNNNGTC	1 cut(s)	234
EarI	CTCTTC	1 cut(s)	421
Ecl136II	GAGCTC	1 cut(s)	931
Eco105I	TACGTA	1 cut(s)	38
Eco130I	CCWWGG	2 cut(s)	1570, 2038
Eco24I	GRGCYC	1 cut(s)	933
Eco31I	GGTCTC	1 cut(s)	269
Eco47I	GGWCC	2 cut(s)	289, 1567
Eco53kI	GAGCTC	1 cut(s)	931
Eco57I	CTGAAG	4 cut(s)	401, 554, 1775, 1799
Eco72I	CACGTG	1 cut(s)	323
EcoICRI	GAGCTC	1 cut(s)	931
EcoNI	CCTNNNNNAGG	1 cut(s)	1867
EcoRII	CCWGG	5 cut(s)	589, 916, 1089, 1353, 1562
EcoT14I	CCWWGG	2 cut(s)	1570, 2038
EcoT22I	ATGCAT	3 cut(s)	105, 1861, 1955
EcoT38I	GRGCYC	1 cut(s)	933
ErhI	CCWWGG	2 cut(s)	1570, 2038
FalI	AAGNNNNNCTT	8 cut(s)	840, 872, 897, 929, 1290, 1322, 2022, 2054
FaqI	GGGAC	5 cut(s)	275, 885, 995, 1153, 1580
FauI	CCCGC	2 cut(s)	781, 2073
Fnu4HI	GCNGC	2 cut(s)	440, 498
FokI	GGATG	7 cut(s)	527, 1025, 1370, 1442, 1846, 1862, 2020
FriOI	GRGCYC	1 cut(s)	933
Fsp4HI	GCNGC	2 cut(s)	440, 498
FspBI	CTAG	5 cut(s)	476, 501, 714, 1199, 1602
GlaI	GCGC	2 cut(s)	1046, 1088
GluI	GCNGC	2 cut(s)	440, 498
GsaI	CCCAGC	2 cut(s)	657, 1657
HaeIII	GGCC	2 cut(s)	457, 1153
HapII	CCGG	1 cut(s)	1889
HhaI	GCGC	2 cut(s)	1047, 1089
Hin6I	GCGC	2 cut(s)	1045, 1087
HinP1I	GCGC	2 cut(s)	1045, 1087
HincII	GTYRAC	1 cut(s)	1761
HindII	GTYRAC	1 cut(s)	1761
HindIII	AAGCTT	1 cut(s)	811
HinfI	GANTC	7 cut(s)	21, 86, 274, 658, 1213, 1226, 1315
HpaI	GTTAAC	1 cut(s)	1761
HpaII	CCGG	1 cut(s)	1889
HphI	GGTGA	6 cut(s)	217, 491, 587, 1402, 1591, 1878
Hpy166II	GTNNAC	5 cut(s)	473, 781, 1474, 1761, 2144
Hpy188I	TCNGA	9 cut(s)	93, 187, 420, 846, 935, 1110, 1509, 1721, 1823
Hpy188III	TCNNGA	8 cut(s)	334, 599, 759, 786, 902, 956, 1897, 2072
Hpy8I	GTNNAC	5 cut(s)	473, 781, 1474, 1761, 2144
HpyAV	CCTTC	8 cut(s)	613, 681, 1292, 1576, 1643, 1873, 1977, 2027
HpyCH4III	ACNGT	7 cut(s)	526, 538, 1126, 1210, 1399, 1831, 1927
HpyCH4IV	ACGT	3 cut(s)	37, 322, 340
HpyF10VI	GCNNNNNNNGC	5 cut(s)	725, 948, 972, 1061, 1348
HpyF3I	CTNAG	8 cut(s)	294, 615, 720, 729, 927, 932, 1041, 1307
HpySE526I	ACGT	3 cut(s)	37, 322, 340
HspAI	GCGC	2 cut(s)	1045, 1087
KspAI	GTTAAC	1 cut(s)	1761
Kzo9I	GATC	9 cut(s)	123, 305, 601, 769, 788, 910, 1098, 1303, 1378
LmnI	GCTCC	3 cut(s)	381, 544, 1356
Lsp1109I	GCAGC	2 cut(s)	426, 484
LweI	GCATC	8 cut(s)	723, 949, 1600, 1717, 1868, 1883, 1962, 2042
MaeI	CTAG	5 cut(s)	476, 501, 714, 1199, 1602
MaeII	ACGT	3 cut(s)	37, 322, 340
MaeIII	GTNAC	2 cut(s)	345, 1495
MalI	GATC	9 cut(s)	125, 307, 603, 771, 790, 912, 1100, 1305, 1380
MboI	GATC	9 cut(s)	123, 305, 601, 769, 788, 910, 1098, 1303, 1378
MflI	RGATCY	2 cut(s)	769, 1098
MhlI	GDGCHC	2 cut(s)	933, 2146
MlyI	GAGTC	1 cut(s)	1324
MmeI	TCCRAC	2 cut(s)	342, 805
Mph1103I	ATGCAT	3 cut(s)	105, 1861, 1955
MroXI	GAANNNNTTC	1 cut(s)	897
MseI	TTAA	8 cut(s)	146, 411, 887, 923, 1680, 1688, 1760, 2096
MslI	CAYNNNNRTG	4 cut(s)	325, 1011, 1134, 1754
MspA1I	CMGCKG	1 cut(s)	776
MspI	CCGG	1 cut(s)	1889
MspR9I	CCNGG	5 cut(s)	591, 918, 1091, 1355, 1564
MssI	GTTTAAAC	1 cut(s)	1689
MvaI	CCWGG	5 cut(s)	591, 918, 1091, 1355, 1564
MvnI	CGCG	1 cut(s)	1047
MwoI	GCNNNNNNNGC	5 cut(s)	725, 948, 972, 1061, 1348
NcoI	CCATGG	1 cut(s)	1570
NdeII	GATC	9 cut(s)	123, 305, 601, 769, 788, 910, 1098, 1303, 1378
NlaIV	GGNNCC	6 cut(s)	184, 291, 1030, 1352, 1363, 1568
NmeAIII	GCCGAG	1 cut(s)	1577
NsiI	ATGCAT	3 cut(s)	105, 1861, 1955
NspI	RCATGY	2 cut(s)	1472, 1519
OliI	CACNNNNGTG	1 cut(s)	325
PciI	ACATGT	1 cut(s)	1515
PdmI	GAANNNNTTC	1 cut(s)	897
PfeI	GAWTC	6 cut(s)	21, 86, 274, 658, 1213, 1226
PfoI	TCCNGGA	1 cut(s)	1353
PinAI	ACCGGT	1 cut(s)	1888
PkrI	GCNGC	2 cut(s)	441, 499
PleI	GAGTC	1 cut(s)	1323
PmaCI	CACGTG	1 cut(s)	323
PmeI	GTTTAAAC	1 cut(s)	1689
PmlI	CACGTG	1 cut(s)	323
PpsI	GAGTC	1 cut(s)	1323
Ppu21I	YACGTR	2 cut(s)	38, 323
PscI	ACATGT	1 cut(s)	1515
Psp124BI	GAGCTC	1 cut(s)	933
Psp6I	CCWGG	5 cut(s)	589, 916, 1089, 1353, 1562
PspCI	CACGTG	1 cut(s)	323
PspFI	CCCAGC	2 cut(s)	653, 1653
PspGI	CCWGG	5 cut(s)	589, 916, 1089, 1353, 1562
PspN4I	GGNNCC	6 cut(s)	184, 291, 1030, 1352, 1363, 1568
PspPI	GGNCC	3 cut(s)	289, 1151, 1567
PsuI	RGATCY	2 cut(s)	769, 1098
RsaI	GTAC	5 cut(s)	450, 474, 766, 797, 1473
RsaNI	GTAC	5 cut(s)	449, 473, 765, 796, 1472
RseI	CAYNNNNRTG	4 cut(s)	325, 1011, 1134, 1754
SacI	GAGCTC	1 cut(s)	933
SaqAI	TTAA	8 cut(s)	146, 411, 887, 923, 1680, 1688, 1760, 2096
SatI	GCNGC	2 cut(s)	440, 498
Sau3AI	GATC	9 cut(s)	123, 305, 601, 769, 788, 910, 1098, 1303, 1378
Sau96I	GGNCC	3 cut(s)	289, 1151, 1567
SchI	GAGTC	1 cut(s)	1324
ScrFI	CCNGG	5 cut(s)	591, 918, 1091, 1355, 1564
SduI	GDGCHC	2 cut(s)	933, 2146
SfaNI	GCATC	8 cut(s)	723, 949, 1600, 1717, 1868, 1883, 1962, 2042
SinI	GGWCC	2 cut(s)	289, 1567
SmiMI	CAYNNNNRTG	4 cut(s)	325, 1011, 1134, 1754
SmlI	CTYRAG	3 cut(s)	784, 857, 2159
SmoI	CTYRAG	3 cut(s)	784, 857, 2159
SnaBI	TACGTA	1 cut(s)	38
SsiI	CCGC	4 cut(s)	468, 774, 966, 2080
SspI	AATATT	1 cut(s)	2092
SspMI	CTAG	5 cut(s)	476, 501, 714, 1199, 1602
SstI	GAGCTC	1 cut(s)	933
StyD4I	CCNGG	5 cut(s)	589, 916, 1089, 1353, 1562
StyI	CCWWGG	2 cut(s)	1570, 2038
TaaI	ACNGT	7 cut(s)	526, 538, 1126, 1210, 1399, 1831, 1927
TaiI	ACGT	3 cut(s)	40, 325, 343
TaqI	TCGA	4 cut(s)	24, 354, 598, 760
TatI	WGTACW	4 cut(s)	448, 472, 764, 1471
TfiI	GAWTC	6 cut(s)	21, 86, 274, 658, 1213, 1226
Tru1I	TTAA	8 cut(s)	146, 411, 887, 923, 1680, 1688, 1760, 2096
Tru9I	TTAA	8 cut(s)	146, 411, 887, 923, 1680, 1688, 1760, 2096
TscAI	CASTG	4 cut(s)	529, 1213, 1621, 1848
TseI	GCWGC	2 cut(s)	439, 497
TspDTI	ATGAA	6 cut(s)	906, 995, 1659, 1919, 1950, 2183
TspGWI	ACGGA	1 cut(s)	368
TspRI	CASTG	4 cut(s)	529, 1213, 1621, 1848
VneI	GTGCAC	1 cut(s)	2142
VpaK11BI	GGWCC	2 cut(s)	289, 1567
XagI	CCTNNNNNAGG	1 cut(s)	1867
XapI	RAATTY	5 cut(s)	176, 402, 995, 1442, 1912
XceI	RCATGY	2 cut(s)	1472, 1519
XmnI	GAANNNNTTC	1 cut(s)	897
XspI	CTAG	5 cut(s)	476, 501, 714, 1199, 1602
Zsp2I	ATGCAT	3 cut(s)	105, 1861, 1955

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.