Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002528

Physical Location & Seq

Genomic Coordinates Reverse (-)

1823076 .. 1828905

Gene Structure 5830 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G022700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ATGGCTAGAAATTTCAGTAGTGAATCTAGTGAAGATGATGTGAGGGGTGAGAGAGATAAATATAGAAGTAGAATCGATTCTAGGTCAAACAATCTTCATGAACCTGGTGATGAAATTGATTCATCAGATTCTGATGGAGGAAATAGAACAAAACAACAGGAGAGACGGGATGGACATCGTAGTGATGATATGGACAACGAAAGGTCCAGCAAGAGGGATCTTAAAGACAAAGGTGGAAGGTGGCTGGATGATCGTCAAGATAGGAAGGGATCTGGAGAAAGTTCTGATGAAGATGGAGAGCTGAAAGAGAAAGACTGGGATACTCAACCGAAGGAAAGAAAGCATGATAATGGCCATAGAAGACGTGAAAATGGGAAGGGTGATAGAGTGAGAGAATCTTTTAGAAGTTCTGAAGAAGATGACGAGCAAGTAAGGAGGCACCGACATGAAAGGGAAAGGGAGAAACCTCGCCGGCATGAGAGTGGGCATAGAAGGCCGGAGACCGAGGATGGTCATAGATATAGGAGCCGCCATTCACGTCACTATTCAGACCACAAGGATGAAAGGGAAGAGCACAGAACATTAGAACAGAAAAAGGATAAAAGAGATGATGATCAGAGAAGGAGGTATAGAAACCAGGATGATGATGGAGATCTAAAGTATCGTAGAAATAACGAGGTAAAAGAAAGACGAGAAGACAGTCGAAGTCTGAGGCAAAATGATGAGAGAGATAGCAGGATGCTTGAAAATTCAAAACCTCAAGGGCAGTCAAAGTTGCAAGAAGGCAACATGAGTACTGATGTGTCAAATTTGGGAAAAAGTGGTGGAGTTTACATCCCCCCGTTTAAGTTGGCCCGGATGATGAAAGACGTTGAAGATAAAAGTAGTGTTCAGTATCAGAGATTGACATGGGATGCCCTCCGAAAGAGTATCAATGGCCTTGTGAACAAGGTCAACGCTGCGAATATAAAAAATATAATTCCTGAAATTTTTGCCGAGAATCTGATTCGTGGAAGGGGTCTCTTTTGCCGTTCATGCATGAAATCACAGATGGCATCTCCAGGTTTCACTGATGTGTTTGCAGCATTGGTTGCTGTTGTCAACACAAAGTTTCCTGAGGTTGGTGAACTTCTGTTGAGAAGAATTGTCTTACAGCTTAAGAGGGCATTTAAACGGAATGACAAGCCACAACTACTAGCTGCCGTTAAATTTATAGCACATCTGGTCAACCAGCAAGTGGCTCATGAGATTATTGCTTTAGAATTGCTGACCGTTTTGCTGGAGAACCCTACCGATGACAGTGTTGAAGTAGCTGTTGGCTTTGTCACCGAGTGTGGATCAATACTGCAGGACCTTTCACCTAAAGGGCTCCATGGCATCTTTGAGCGCTTTCGTGGAATTCTTCATGAGGGAGAAATAGACAAAAGAGTGCAATATTTGATTGAAAACTTGTTTGCAACACGAAAAGCAAAGTTTCAGGGGCACCCAGCTGTTCGTCCCGAACTGGACCTGGTAGAGCAGGAAGACCAGTTGACACATGAACTTTCTCTTGAAGAGGAGATAGATCCAGAAATTACCCTTGATATTTTCAAGCCCGATCCTGATTTCCTTGAGAATGAGAAGCGCTATGAAGAATTGAAGAAAACCATACTTGGTGAGGAGTCTGAAGATGAAGAAGGTTCTGATGCAGTTTCAGATGGCGAGGATGACGACGAGGACGATGATGATGAAGAATCTGAGGAAGAGGATGAGGAGCAGATGCAAATAAGAGATGAGACAGAGACAAATCTTGTAAATCTTCGAAGAACAATCTATCTTACAATCATGTCCAGTGTAGATTTTGAGGAGGCGGGTCATAAGCTCCTGAAGATTAAACTTGAGCCTGGTCAAGAGATGGAACTATGCGTCATGCTTTTGGAATGTTGCAGTCAGGAGAGAACCTACCTCCGTTATTATGGTCTGTTGGGGCAGAGGTTCTGTATGATCAACAAAGTCCACCAGGAAAATTTTGAGAAATGCTTTGTCCAGCAGTATTCCATGATCCACCGGCTTGAAACAAATAAGCTACGTAATGTTGCGAAGTTTTTCGCCCATTTACTCGGCACAGATGCCCTTCCCTGGCACGTGTTGGCCTATATACGATTGACGGAAGAGGACACTACTTCATCTTCTCGTATTTTTATCAAGATCCTTTTCCAGGAATTGTCAGAACATCTTGGCATCCGTTTATTAAATGAGCGGCTCACTGATCCTTCAATGCAGGATTCTTATGATTCTATTTTCCCAAAGGATAATCCCAAGAACACTCGTTTTGCCATTAATTTTTTCACATCCATTGGGCTTGGTGGCATCACTGAGAACCTGCGTGAGTACTTGAAGCATATGCCACGACTCATCATGCAACAACAAAAAGCAGTGTCAGACTCAGAATCTGAGAGTTCAGGTTCATCTGATTCGGACTCTGAGTCTGAATCAGAACCATCAAGCTCTGATGAAAGTGACAGTGATAGTGACAGACGGCACAAGAAGCGTAGGAGTGAAAGTGATAGGAAGGAAAGACACAAGAAGCGTAGGAGAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071006 GO:0071012 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

861

Amino Acids

100.45

Weight (kDa)

5.42

Isoelectric Point (pI)

66.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80930
fragaria_vesca	FvH4_3g01450 FvH4_3g43230 FvH4_3g43240 FvH4_3g43240
malus_domestica	MD03G1023500.v1.1 MD11G1028600.v1.1
prunus_persica	Prupe.6G022700_v2.0.a1 Prupe.6G022700_v2.0.a1
pyrus_communis	pycom03g02010 pycom11g02210
rosa_chinensis	RchiOBHm_Chr5g0002291 RchiOBHm_Chr5g0077281 RchiOBHm_Chr5g0077291
rosa_laevigata	RLG00000031014 RLG00000036681 RLG00000036682
rosa_multiflora	Rmu_co8446135.1_g000001 Rmu_sc0000433.1_g000042 Rmu_sc0001492.1_g000008 Rmu_sc0005576.1_g000001 Rmu_sc0006137.1_g000009 Rmu_sc0008383.1_g000001 Rmu_sc0013155.1_g000012 Rmu_ssc0000410.1_g000040
rosa_roxburghii	Rroxscaffold_1G00004680 Rroxscaffold_1G00073650
rosa_rugosa	Rorug04G0394900 Rorug05G0453500
rosa_samantha	Rh5AG017700 Rh5AG508400 Rh5AG508500 Rh5BG020300 Rh5BG529600 Rh5CG019100 Rh5CG019400 Rh5CG554100 Rh5DG018300 Rh5DG542200
rosa_wichuraiana	Rw5G046900 Rw5G046910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2370
AccB1I	GGYRCC	2 cut(s)	438, 1482
AccB7I	CCANNNNNTGG	1 cut(s)	1237
AccBSI	CCGCTC	1 cut(s)	2239
AciI	CCGC	3 cut(s)	529, 1850, 2239
AclWI	GGATC	8 cut(s)	225, 277, 1345, 1559, 1592, 2035, 2182, 2243
AcoI	YGGCCR	1 cut(s)	352
AcsI	RAATTY	7 cut(s)	10, 748, 808, 987, 1208, 1398, 2005
AcuI	CTGAAG	3 cut(s)	432, 1686, 1886
AcvI	CACGTG	1 cut(s)	2125
AdeI	CACNNNGTG	1 cut(s)	1332
AfaI	GTAC	2 cut(s)	796, 2372
AfeI	AGCGCT	2 cut(s)	1388, 1625
AfiI	CCNNNNNNNGG	5 cut(s)	213, 1121, 1237, 2118, 2197
AflII	CTTAAG	1 cut(s)	1157
AflIII	ACRYGT	1 cut(s)	2124
AhdI	GACNNNNNGTC	1 cut(s)	2464
AjiI	CACGTC	2 cut(s)	365, 539
AjnI	CCWGG	8 cut(s)	103, 636, 1060, 1509, 1882, 1998, 2117, 2196
AjuI	GAANNNNNNNTTGG	2 cut(s)	1299, 1331
AleI	CACNNNNGTG	1 cut(s)	1073
AluBI	AGCT	8 cut(s)	301, 1156, 1199, 1313, 1490, 1861, 2065, 2487
AluI	AGCT	8 cut(s)	301, 1156, 1199, 1313, 1490, 1861, 2065, 2487
Alw21I	GWGCWC	1 cut(s)	576
Alw26I	GTCTC	5 cut(s)	157, 494, 1025, 1769, 1775
AlwI	GGATC	8 cut(s)	225, 277, 1345, 1559, 1592, 2035, 2182, 2243
AlwNI	CAGNNNCTG	2 cut(s)	131, 2432
Aor51HI	AGCGCT	2 cut(s)	1388, 1625
AoxI	GGCC	5 cut(s)	352, 494, 852, 937, 2130
ApeKI	GCWGC	3 cut(s)	959, 1082, 1199
ApoI	RAATTY	7 cut(s)	10, 748, 808, 987, 1208, 1398, 2005
AseI	ATTAAT	1 cut(s)	2319
Asp700I	GAANNNNTTC	2 cut(s)	76, 2084
AspLEI	GCGC	2 cut(s)	1389, 1626
AspS9I	GGNCC	4 cut(s)	204, 853, 1351, 1507
AsuC2I	CCSGG	1 cut(s)	856
AsuHPI	GGTGA	7 cut(s)	59, 119, 392, 1136, 1318, 1350, 1667
AsuII	TTCGAA	1 cut(s)	1801
AvaII	GGWCC	3 cut(s)	204, 1351, 1507
AxyI	CCTNAGG	1 cut(s)	1116
BaeGI	GKGCMC	1 cut(s)	1485
BalI	TGGCCA	1 cut(s)	354
BanI	GGYRCC	2 cut(s)	438, 1482
BanII	GRGCYC	1 cut(s)	1371
BbrPI	CACGTG	1 cut(s)	2125
BbsI	GAAGAC	3 cut(s)	367, 702, 1530
Bbv12I	GWGCWC	1 cut(s)	576
BbvI	GCAGC	3 cut(s)	946, 1094, 1186
BccI	CCATC	9 cut(s)	128, 164, 287, 503, 641, 1045, 1691, 1888, 2488
BceAI	ACGGC	3 cut(s)	1014, 1187, 2534
BciT130I	CCWGG	8 cut(s)	105, 638, 1062, 1511, 1884, 2000, 2119, 2198
BciVI	GTATCC	1 cut(s)	313
BclI	TGATCA	2 cut(s)	613, 1983
BcnI	CCSGG	1 cut(s)	856
BcoDI	GTCTC	5 cut(s)	157, 494, 1025, 1769, 1775
BfaI	CTAG	4 cut(s)	6, 27, 81, 1196
BfmI	CTRYAG	1 cut(s)	1346
BfoI	RGCGCY	2 cut(s)	1390, 1627
BfrI	CTTAAG	1 cut(s)	1157
BfuAI	ACCTGC	1 cut(s)	2370
BfuI	GTATCC	1 cut(s)	313
BglII	AGATCT	1 cut(s)	652
BisI	GCNGC	5 cut(s)	529, 960, 1083, 1200, 2240
BlsI	GCNGC	5 cut(s)	530, 961, 1084, 1201, 2241
BmcAI	AGTACT	2 cut(s)	796, 2372
Bme1390I	CCNGG	9 cut(s)	105, 638, 856, 1062, 1511, 1884, 2000, 2119, 2198
Bme18I	GGWCC	3 cut(s)	204, 1351, 1507
BmeRI	GACNNNNNGTC	1 cut(s)	2464
BmgBI	CACGTC	2 cut(s)	365, 539
BmgT120I	GGNCC	4 cut(s)	204, 853, 1351, 1507
BmiI	GGNNCC	4 cut(s)	440, 527, 1370, 1484
BmrFI	CCNGG	9 cut(s)	105, 638, 856, 1062, 1511, 1884, 2000, 2119, 2198
BmrI	ACTGGG	1 cut(s)	325
BmsI	GCATC	9 cut(s)	729, 904, 1064, 1386, 1675, 1749, 2098, 2229, 2358
BmuI	ACTGGG	1 cut(s)	325
BpiI	GAAGAC	3 cut(s)	367, 702, 1530
BpmI	CTGGAG	3 cut(s)	294, 1044, 1301
Bpu14I	TTCGAA	1 cut(s)	1801
BpuEI	CTTGAG	3 cut(s)	744, 1631, 1898
BpuMI	CCSGG	1 cut(s)	856
Bsa29I	ATCGAT	1 cut(s)	75
BsaAI	YACGTR	2 cut(s)	2069, 2125
BsaBI	GATNNNNATC	3 cut(s)	174, 612, 651
BsaI	GGTCTC	2 cut(s)	494, 1025
BsaJI	CCNNGG	3 cut(s)	504, 1372, 2117
BsaXI	ACNNNNNCTCC	2 cut(s)	2527, 2557
Bsc4I	CCNNNNNNNGG	5 cut(s)	213, 1121, 1237, 2118, 2197
Bse118I	RCCGGY	2 cut(s)	471, 2046
Bse1I	ACTGG	4 cut(s)	320, 1509, 1528, 1830
Bse21I	CCTNAGG	1 cut(s)	1116
Bse8I	GATNNNNATC	3 cut(s)	174, 612, 651
BseBI	CCWGG	8 cut(s)	105, 638, 1062, 1511, 1884, 2000, 2119, 2198
BseCI	ATCGAT	1 cut(s)	75
BseDI	CCNNGG	3 cut(s)	504, 1372, 2117
BseJI	GATNNNNATC	3 cut(s)	174, 612, 651
BseLI	CCNNNNNNNGG	5 cut(s)	213, 1121, 1237, 2118, 2197
BseMII	CTCAG	7 cut(s)	701, 1107, 1728, 2346, 2424, 2439, 2454
BseNI	ACTGG	4 cut(s)	320, 1509, 1528, 1830
BseRI	GAGGAG	4 cut(s)	1571, 1673, 1766, 1859
BseSI	GKGCMC	1 cut(s)	1485
BseXI	GCAGC	3 cut(s)	946, 1094, 1186
BseYI	CCCAGC	1 cut(s)	1486
BshFI	GGCC	5 cut(s)	354, 496, 854, 939, 2132
BshNI	GGYRCC	2 cut(s)	438, 1482
BshVI	ATCGAT	1 cut(s)	75
BsiHKAI	GWGCWC	1 cut(s)	576
BsiSI	CCGG	4 cut(s)	472, 497, 856, 2047
BslFI	GGGAC	1 cut(s)	1482
BslI	CCNNNNNNNGG	5 cut(s)	213, 1121, 1237, 2118, 2197
BsmAI	GTCTC	5 cut(s)	157, 494, 1025, 1769, 1775
BsmBI	CGTCTC	1 cut(s)	157
BsmFI	GGGAC	1 cut(s)	1482
BsnI	GGCC	5 cut(s)	354, 496, 854, 939, 2132
Bso31I	GGTCTC	2 cut(s)	494, 1025
Bsp119I	TTCGAA	1 cut(s)	1801
Bsp1286I	GDGCHC	3 cut(s)	576, 1371, 1485
Bsp19I	CCATGG	1 cut(s)	1372
BspACI	CCGC	3 cut(s)	529, 1850, 2239
BspANI	GGCC	5 cut(s)	354, 496, 854, 939, 2132
BspCNI	CTCAG	7 cut(s)	702, 1108, 1729, 2347, 2425, 2438, 2455
BspDI	ATCGAT	1 cut(s)	75
BspHI	TCATGA	3 cut(s)	97, 1243, 1405
BspLI	GGNNCC	4 cut(s)	440, 527, 1370, 1484
BspMAI	CTGCAG	1 cut(s)	1350
BspMI	ACCTGC	1 cut(s)	2370
BspPI	GGATC	8 cut(s)	225, 277, 1345, 1559, 1592, 2035, 2182, 2243
BspQI	GCTCTTC	1 cut(s)	564
BspT104I	TTCGAA	1 cut(s)	1801
BspT107I	GGYRCC	2 cut(s)	438, 1482
BspTI	CTTAAG	1 cut(s)	1157
BspTNI	GGTCTC	2 cut(s)	494, 1025
BsrBI	CCGCTC	1 cut(s)	2239
BsrFI	RCCGGY	2 cut(s)	471, 2046
BsrI	ACTGG	4 cut(s)	320, 1509, 1528, 1830
BssAI	RCCGGY	2 cut(s)	471, 2046
BssECI	CCNNGG	3 cut(s)	504, 1372, 2117
BssT1I	CCWWGG	1 cut(s)	1372
Bst2UI	CCWGG	8 cut(s)	105, 638, 1062, 1511, 1884, 2000, 2119, 2198
Bst4CI	ACNGT	4 cut(s)	701, 1273, 1301, 2504
Bst6I	CTCTTC	4 cut(s)	564, 1548, 1737, 2145
BstAFI	CTTAAG	1 cut(s)	1157
BstAPI	GCANNNNNTGC	1 cut(s)	1091
BstBAI	YACGTR	2 cut(s)	2069, 2125
BstBI	TTCGAA	1 cut(s)	1801
BstC8I	GCNNGC	1 cut(s)	473
BstDEI	CTNAG	7 cut(s)	710, 1116, 1737, 2355, 2425, 2433, 2463
BstDSI	CCRYGG	1 cut(s)	1372
BstENI	CCTNNNNNAGG	1 cut(s)	2195
BstH2I	RGCGCY	2 cut(s)	1390, 1627
BstHHI	GCGC	2 cut(s)	1389, 1626
BstMAI	GTCTC	5 cut(s)	157, 494, 1025, 1769, 1775
BstMWI	GCNNNNNNNGC	4 cut(s)	493, 1035, 1091, 2527
BstNI	CCWGG	8 cut(s)	105, 638, 1062, 1511, 1884, 2000, 2119, 2198
BstSCI	CCNGG	9 cut(s)	103, 636, 854, 1060, 1509, 1882, 1998, 2117, 2196
BstSFI	CTRYAG	1 cut(s)	1346
BstSLI	GKGCMC	1 cut(s)	1485
BstSNI	TACGTA	1 cut(s)	2069
BstV1I	GCAGC	3 cut(s)	946, 1094, 1186
BstV2I	GAAGAC	3 cut(s)	367, 702, 1530
BstX2I	RGATCY	5 cut(s)	217, 269, 652, 1564, 2187
BstYI	RGATCY	5 cut(s)	217, 269, 652, 1564, 2187
Bsu15I	ATCGAT	1 cut(s)	75
Bsu36I	CCTNAGG	1 cut(s)	1116
BsuI	GTATCC	1 cut(s)	313
BsuRI	GGCC	5 cut(s)	354, 496, 854, 939, 2132
BsuTUI	ATCGAT	1 cut(s)	75
BtgI	CCRYGG	1 cut(s)	1372
BtrI	CACGTC	2 cut(s)	365, 539
BtsI	GCAGTG	1 cut(s)	2421
BtsIMutI	CAGTG	7 cut(s)	1068, 1306, 1837, 2244, 2352, 2421, 2509
BveI	ACCTGC	1 cut(s)	2370
Cac8I	GCNNGC	1 cut(s)	473
CaiI	CAGNNNCTG	2 cut(s)	131, 2432
CciI	TCATGA	3 cut(s)	97, 1243, 1405
CfoI	GCGC	2 cut(s)	1389, 1626
Cfr10I	RCCGGY	2 cut(s)	471, 2046
Cfr13I	GGNCC	4 cut(s)	204, 853, 1351, 1507
ClaI	ATCGAT	1 cut(s)	75
CseI	GACGC	1 cut(s)	1894
CsiI	ACCWGGT	2 cut(s)	103, 1509
Csp6I	GTAC	2 cut(s)	795, 2371
CviQI	GTAC	2 cut(s)	795, 2371
DdeI	CTNAG	7 cut(s)	710, 1116, 1737, 2355, 2425, 2433, 2463
DraI	TTTAAA	1 cut(s)	1171
DraIII	CACNNNGTG	1 cut(s)	1332
DriI	GACNNNNNGTC	1 cut(s)	2464
EaeI	YGGCCR	1 cut(s)	352
Eam1104I	CTCTTC	4 cut(s)	564, 1548, 1737, 2145
Eam1105I	GACNNNNNGTC	1 cut(s)	2464
EarI	CTCTTC	4 cut(s)	564, 1548, 1737, 2145
Eco105I	TACGTA	1 cut(s)	2069
Eco130I	CCWWGG	1 cut(s)	1372
Eco24I	GRGCYC	1 cut(s)	1371
Eco31I	GGTCTC	2 cut(s)	494, 1025
Eco47I	GGWCC	3 cut(s)	204, 1351, 1507
Eco47III	AGCGCT	2 cut(s)	1388, 1625
Eco57I	CTGAAG	3 cut(s)	432, 1686, 1886
Eco72I	CACGTG	1 cut(s)	2125
Eco81I	CCTNAGG	1 cut(s)	1116
EcoNI	CCTNNNNNAGG	1 cut(s)	2195
EcoO109I	RGGNCCY	1 cut(s)	1351
EcoRI	GAATTC	1 cut(s)	1398
EcoRII	CCWGG	8 cut(s)	103, 636, 1060, 1509, 1882, 1998, 2117, 2196
EcoT14I	CCWWGG	1 cut(s)	1372
EcoT22I	ATGCAT	1 cut(s)	1040
EcoT38I	GRGCYC	1 cut(s)	1371
ErhI	CCWWGG	1 cut(s)	1372
Esp3I	CGTCTC	1 cut(s)	157
FaqI	GGGAC	1 cut(s)	1482
FauI	CCCGC	1 cut(s)	1843
FauNDI	CATATG	1 cut(s)	2382
FbaI	TGATCA	2 cut(s)	613, 1983
Fnu4HI	GCNGC	5 cut(s)	529, 960, 1083, 1200, 2240
FriOI	GRGCYC	1 cut(s)	1371
Fsp4HI	GCNGC	5 cut(s)	529, 960, 1083, 1200, 2240
FspBI	CTAG	4 cut(s)	6, 27, 81, 1196
GlaI	GCGC	2 cut(s)	1388, 1625
GluI	GCNGC	5 cut(s)	529, 960, 1083, 1200, 2240
GsaI	CCCAGC	1 cut(s)	1490
GsuI	CTGGAG	3 cut(s)	294, 1044, 1301
HaeII	RGCGCY	2 cut(s)	1390, 1627
HaeIII	GGCC	5 cut(s)	354, 496, 854, 939, 2132
HapII	CCGG	4 cut(s)	472, 497, 856, 2047
HgaI	GACGC	1 cut(s)	1894
HhaI	GCGC	2 cut(s)	1389, 1626
Hin6I	GCGC	2 cut(s)	1387, 1624
HinP1I	GCGC	2 cut(s)	1387, 1624
HincII	GTYRAC	4 cut(s)	955, 1102, 1228, 1533
HindII	GTYRAC	4 cut(s)	955, 1102, 1228, 1533
HpaII	CCGG	4 cut(s)	472, 497, 856, 2047
HphI	GGTGA	7 cut(s)	59, 119, 392, 1136, 1318, 1350, 1667
Hpy166II	GTNNAC	8 cut(s)	832, 946, 955, 1102, 1127, 1228, 1533, 1996
Hpy8I	GTNNAC	8 cut(s)	832, 946, 955, 1102, 1127, 1228, 1533, 1996
Hpy99I	CGWCG	1 cut(s)	1715
HpyCH4III	ACNGT	4 cut(s)	701, 1273, 1301, 2504
HpyCH4IV	ACGT	5 cut(s)	364, 538, 870, 2068, 2124
HpyF10VI	GCNNNNNNNGC	4 cut(s)	493, 1035, 1091, 2527
HpyF3I	CTNAG	7 cut(s)	710, 1116, 1737, 2355, 2425, 2433, 2463
HpySE526I	ACGT	5 cut(s)	364, 538, 870, 2068, 2124
HspAI	GCGC	2 cut(s)	1387, 1624
KroI	GCCGGC	1 cut(s)	471
KroNI	GCCGGC	1 cut(s)	473
Ksp22I	TGATCA	2 cut(s)	613, 1983
LguI	GCTCTTC	1 cut(s)	564
LmnI	GCTCC	4 cut(s)	525, 1374, 1753, 1866
Lsp1109I	GCAGC	3 cut(s)	946, 1094, 1186
LweI	GCATC	9 cut(s)	729, 904, 1064, 1386, 1675, 1749, 2098, 2229, 2358
MabI	ACCWGGT	2 cut(s)	103, 1509
MaeI	CTAG	4 cut(s)	6, 27, 81, 1196
MaeII	ACGT	5 cut(s)	364, 538, 870, 2068, 2124
MaeIII	GTNAC	4 cut(s)	539, 1324, 2498, 2510
MbiI	CCGCTC	1 cut(s)	2239
MflI	RGATCY	5 cut(s)	217, 269, 652, 1564, 2187
MhlI	GDGCHC	3 cut(s)	576, 1371, 1485
MlsI	TGGCCA	1 cut(s)	354
MluNI	TGGCCA	1 cut(s)	354
MlyI	GAGTC	5 cut(s)	1670, 2385, 2417, 2453, 2474
Mox20I	TGGCCA	1 cut(s)	354
Mph1103I	ATGCAT	1 cut(s)	1040
MroNI	GCCGGC	1 cut(s)	471
MroXI	GAANNNNTTC	2 cut(s)	76, 2084
MscI	TGGCCA	1 cut(s)	354
MseI	TTAA	9 cut(s)	222, 846, 1158, 1170, 1206, 1872, 2231, 2319, 2581
MslI	CAYNNNNRTG	6 cut(s)	180, 348, 444, 480, 558, 1073
Msp20I	TGGCCA	1 cut(s)	354
MspA1I	CMGCKG	1 cut(s)	1490
MspCI	CTTAAG	1 cut(s)	1157
MspI	CCGG	4 cut(s)	472, 497, 856, 2047
MspR9I	CCNGG	9 cut(s)	105, 638, 856, 1062, 1511, 1884, 2000, 2119, 2198
MvaI	CCWGG	8 cut(s)	105, 638, 1062, 1511, 1884, 2000, 2119, 2198
MwoI	GCNNNNNNNGC	4 cut(s)	493, 1035, 1091, 2527
NaeI	GCCGGC	1 cut(s)	473
NciI	CCSGG	1 cut(s)	856
NcoI	CCATGG	1 cut(s)	1372
NdeI	CATATG	1 cut(s)	2382
NgoMIV	GCCGGC	1 cut(s)	471
NlaIV	GGNNCC	4 cut(s)	440, 527, 1370, 1484
NmeAIII	GCCGAG	2 cut(s)	1021, 2079
NmuCI	GTSAC	4 cut(s)	539, 1324, 2498, 2510
NsiI	ATGCAT	1 cut(s)	1040
NspV	TTCGAA	1 cut(s)	1801
OliI	CACNNNNGTG	1 cut(s)	1073
PagI	TCATGA	3 cut(s)	97, 1243, 1405
PciSI	GCTCTTC	1 cut(s)	564
PcsI	WCGNNNNNNNCGW	1 cut(s)	1716
PdiI	GCCGGC	1 cut(s)	473
PdmI	GAANNNNTTC	2 cut(s)	76, 2084
PflMI	CCANNNNNTGG	1 cut(s)	1237
PfoI	TCCNGGA	1 cut(s)	2196
PkrI	GCNGC	5 cut(s)	530, 961, 1084, 1201, 2241
PleI	GAGTC	5 cut(s)	1669, 2385, 2417, 2453, 2473
PmaCI	CACGTG	1 cut(s)	2125
PmlI	CACGTG	1 cut(s)	2125
PpsI	GAGTC	5 cut(s)	1669, 2385, 2417, 2453, 2473
Ppu21I	YACGTR	2 cut(s)	2069, 2125
PpuMI	RGGWCCY	1 cut(s)	1351
PshBI	ATTAAT	1 cut(s)	2319
Psp5II	RGGWCCY	1 cut(s)	1351
Psp6I	CCWGG	8 cut(s)	103, 636, 1060, 1509, 1882, 1998, 2117, 2196
PspCI	CACGTG	1 cut(s)	2125
PspFI	CCCAGC	1 cut(s)	1486
PspGI	CCWGG	8 cut(s)	103, 636, 1060, 1509, 1882, 1998, 2117, 2196
PspN4I	GGNNCC	4 cut(s)	440, 527, 1370, 1484
PspPI	GGNCC	4 cut(s)	204, 853, 1351, 1507
PspPPI	RGGWCCY	1 cut(s)	1351
PstI	CTGCAG	1 cut(s)	1350
PstNI	CAGNNNCTG	2 cut(s)	131, 2432
PsuI	RGATCY	5 cut(s)	217, 269, 652, 1564, 2187
PvuII	CAGCTG	1 cut(s)	1490
RsaI	GTAC	2 cut(s)	796, 2372
RsaNI	GTAC	2 cut(s)	795, 2371
RseI	CAYNNNNRTG	6 cut(s)	180, 348, 444, 480, 558, 1073
SapI	GCTCTTC	1 cut(s)	564
SaqAI	TTAA	9 cut(s)	222, 846, 1158, 1170, 1206, 1872, 2231, 2319, 2581
SatI	GCNGC	5 cut(s)	529, 960, 1083, 1200, 2240
Sau96I	GGNCC	4 cut(s)	204, 853, 1351, 1507
ScaI	AGTACT	2 cut(s)	796, 2372
SchI	GAGTC	5 cut(s)	1670, 2385, 2417, 2453, 2474
ScrFI	CCNGG	9 cut(s)	105, 638, 856, 1062, 1511, 1884, 2000, 2119, 2198
SduI	GDGCHC	3 cut(s)	576, 1371, 1485
SexAI	ACCWGGT	2 cut(s)	103, 1509
SfaNI	GCATC	9 cut(s)	729, 904, 1064, 1386, 1675, 1749, 2098, 2229, 2358
SfcI	CTRYAG	1 cut(s)	1346
SfuI	TTCGAA	1 cut(s)	1801
SinI	GGWCC	3 cut(s)	204, 1351, 1507
SmiMI	CAYNNNNRTG	6 cut(s)	180, 348, 444, 480, 558, 1073
SmlI	CTYRAG	4 cut(s)	759, 1157, 1610, 1877
SmoI	CTYRAG	4 cut(s)	759, 1157, 1610, 1877
SnaBI	TACGTA	1 cut(s)	2069
SsiI	CCGC	3 cut(s)	529, 1850, 2239
SspI	AATATT	1 cut(s)	1436
SspMI	CTAG	4 cut(s)	6, 27, 81, 1196
StyD4I	CCNGG	9 cut(s)	103, 636, 854, 1060, 1509, 1882, 1998, 2117, 2196
StyI	CCWWGG	1 cut(s)	1372
TaaI	ACNGT	4 cut(s)	701, 1273, 1301, 2504
TaiI	ACGT	5 cut(s)	367, 541, 873, 2071, 2127
TaqI	TCGA	3 cut(s)	75, 703, 1801
TaqII	GACCGA	1 cut(s)	518
TatI	WGTACW	2 cut(s)	794, 2370
TauI	GCSGC	2 cut(s)	531, 2242
Tru1I	TTAA	9 cut(s)	222, 846, 1158, 1170, 1206, 1872, 2231, 2319, 2581
Tru9I	TTAA	9 cut(s)	222, 846, 1158, 1170, 1206, 1872, 2231, 2319, 2581
TscAI	CASTG	7 cut(s)	1075, 1306, 1837, 2251, 2359, 2421, 2509
TseFI	GTSAC	4 cut(s)	539, 1324, 2498, 2510
TseI	GCWGC	3 cut(s)	959, 1082, 1199
Tsp45I	GTSAC	4 cut(s)	539, 1324, 2498, 2510
TspGWI	ACGGA	4 cut(s)	1189, 1937, 2162, 2213
TspRI	CASTG	7 cut(s)	1075, 1306, 1837, 2251, 2359, 2421, 2509
Van91I	CCANNNNNTGG	1 cut(s)	1237
Vha464I	CTTAAG	1 cut(s)	1157
VpaK11BI	GGWCC	3 cut(s)	204, 1351, 1507
VspI	ATTAAT	1 cut(s)	2319
XagI	CCTNNNNNAGG	1 cut(s)	2195
XapI	RAATTY	7 cut(s)	10, 748, 808, 987, 1208, 1398, 2005
XcmI	CCANNNNNNNNNTGG	1 cut(s)	644
XmnI	GAANNNNTTC	2 cut(s)	76, 2084
XspI	CTAG	4 cut(s)	6, 27, 81, 1196
ZrmI	AGTACT	2 cut(s)	796, 2372
Zsp2I	ATGCAT	1 cut(s)	1040

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.