Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002528

Physical Location & Seq

Genomic Coordinates Reverse (-)

1360009 .. 1361931

Gene Structure 1923 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031014

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGCTAGAAAGCTCAGTATTGAATTGAGCGACAAAGATATGAGGTATAGAAGTAAAAACAATCGCATCTCGAACTATCGTCCTGATGGGAGATGGGATGAGCATCATAGGAAGGAATCACGAAATAATGAGCGAGATAACAATTCAAAACCACCTCATGGACGCTCCACATTGCTAGAGGGAAACCGAAACCGAAATCTGAATACTGATGTGTCAAGTTTGGGAAAGAGAGGTCGGGTTTATGTTCCGCCTTATAAGTTGGCCCGAAAGATGAAAGAGGTCGAAGATAAAAGTAGCATTGAGTATCAGAGGCTGACATGGGACGCCCTAAAAAAAAGCATCAATGGGGTAGTGAACAAGGTCAATGCTGCCAACATAAAGAATATAATCCCTGAGATATTTTCAGAGAATCTCATTAGCGGCAGGGGACTCTTCTGCCGATCCATTATGAAGTCACAGATGGCATCTCCGGGATTCACAGACGTATTTGCTTCCTTGGTTGCTGTTGTCAACACCAAGTTTCCTGAGGTCGGCCAGCTTATGTTGAGAAGAATTGTCTTGAAGCTTAAGATAGCATTCAAGCGGAACGACAAGCCACAGCTACTAGCTGCAGTTAAATTCATTGCTCATCTTGTAAACCGACAAGTGGCTCATGAGATTGTAGCATTGGAATTGCTAACTGTACTGCTTGAAAACCCGACAGATGACAGTGTTGAAGTTGCTGTATGGTTTGTGACAGATTGTGGCTCAATGCTACAAGACCTTTCACCGAGAGGGCTGCGTGGAATCTTTGATCGGTTTTTGGGGATTCTTCATGAAGGAGAAATTGACAAACGAGTTCAGTTTTTGATTGAGGGCTTATTAGCTTTAAGGAAAGCCAAGTTTAATGGTTACCCAGCTGTTCGTCCAGAGTTGGACCTTGTGGAGCAAGAAGACCAGTTCACTCATGAGCTTTCTCTTCAAGATGATATAGATCCAGAAGATAGCCTTAATCTCTTCAAGCCGGACCCTGATTTCCTTAAGAATGAGAAGCGCTATGAAGAAGTCAAGAAAACAATACTTGGTGATGAGTCTGAAGACGACGATGAGGTCAACGACGACGATGAATCTGAAGAAGAAGAAGAGGAGGATGAGCAGCACATGCAAATAAGAGATGAGACAGACACAAATCTCATCAATCTTCGAAGGACGATATATCTGACCATCATGTGTAGTCTAGATTTTGAGGAAGTAGGTCATAAGCTTCTTCAGATTAAGCTCGAACCAGGCCAAGAGATGGAGCTATGCACTATGCTTTTAGAATGTTGCAGTCAGGAGAAAGACTACCGTCCTTTTTACGGTCTCTTGGGACAGCGGTTCTGCATGATCAACAGAATCTACCGGGAAAATTTTGAGAGATGTTTTGTACAGCAGTACTCGATGATCCACCAGTTCGAAACAAACAAGATTCGCAATGTTGCTTCATTTTACGCCCATTTACTCTCAACAGATGCTCTTCCATGGCATTGCATAGCCTATATGCGTCTAACCGAAAAGGACACCACTTCGTCTTCTAGGATTTTTATCAAGATCCTTTTCCAGGAGTTGTCAAAGCAGCTTGGCTCTCATATGCTTAATGAGCGGCTCCATGATCCGGCCATGCAAGAAAGTAATGAGTCTATTTTGCCGAGGGATAATCCGAGGAACTCCCGGTTCGCCATAAATTTCTTCACACAAATAGGGCTTGGTCCTCTCACTGAGAACCTGCGTGAGTTCTATGATCACCTGCCACAGCTTATTAGGCAACAACAAAAAGCAGTGTCGGAGGAAGAATCTGAGAGCTCTGGTTCATCGGATTCGGAGTCGGAATCATCAAGCTCTGATGATGAAAGCGAAAGTGATGGAAATGAAAGACGCAAGAATAAACGTAGGAGGAGAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071006 GO:0071012 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

641

Amino Acids

74.36

Weight (kDa)

5.46

Isoelectric Point (pI)

55.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MA3	PF02847	394 - 500	1.7e-27	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80930
fragaria_vesca	FvH4_3g01450 FvH4_3g43230 FvH4_3g43240 FvH4_3g43240
malus_domestica	MD03G1023500.v1.1 MD11G1028600.v1.1
prunus_persica	Prupe.6G022700_v2.0.a1 Prupe.6G022700_v2.0.a1
pyrus_communis	pycom03g02010 pycom11g02210
rosa_chinensis	RchiOBHm_Chr5g0002291 RchiOBHm_Chr5g0077281 RchiOBHm_Chr5g0077291
rosa_laevigata	RLG00000031014 RLG00000036681 RLG00000036682
rosa_multiflora	Rmu_co8446135.1_g000001 Rmu_sc0000433.1_g000042 Rmu_sc0001492.1_g000008 Rmu_sc0005576.1_g000001 Rmu_sc0006137.1_g000009 Rmu_sc0008383.1_g000001 Rmu_sc0013155.1_g000012 Rmu_ssc0000410.1_g000040
rosa_roxburghii	Rroxscaffold_1G00004680 Rroxscaffold_1G00073650
rosa_rugosa	Rorug04G0394900 Rorug05G0453500
rosa_samantha	Rh5AG017700 Rh5AG508400 Rh5AG508500 Rh5BG020300 Rh5BG529600 Rh5CG019100 Rh5CG019400 Rh5CG554100 Rh5DG018300 Rh5DG542200
rosa_wichuraiana	Rw5G046900 Rw5G046910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	255
AarI	CACCTGC	1 cut(s)	1773
AasI	GACNNNNNNGTC	1 cut(s)	1088
Acc36I	ACCTGC	2 cut(s)	1752, 1773
AccB7I	CCANNNNNTGG	2 cut(s)	158, 1276
AccBSI	CCGCTC	1 cut(s)	1621
AciI	CCGC	5 cut(s)	248, 420, 583, 1354, 1621
AclWI	GGATC	5 cut(s)	435, 968, 1417, 1564, 1625
AcoI	YGGCCR	2 cut(s)	532, 1635
AcsI	RAATTY	3 cut(s)	617, 1387, 1702
AcuI	CTGAAG	3 cut(s)	1095, 1131, 1232
AcyI	GRCGYC	1 cut(s)	324
AfaI	GTAC	3 cut(s)	684, 1407, 1415
AfeI	AGCGCT	1 cut(s)	1034
AfiI	CCNNNNNNNGG	7 cut(s)	158, 530, 646, 1276, 1337, 1579, 1633
AflII	CTTAAG	2 cut(s)	566, 1019
AgsI	TTSAA	8 cut(s)	23, 147, 562, 580, 692, 716, 962, 1000
AjnI	CCWGG	2 cut(s)	1264, 1578
Alw21I	GWGCWC	1 cut(s)	1823
Alw26I	GTCTC	2 cut(s)	1151, 1346
AlwI	GGATC	5 cut(s)	435, 968, 1417, 1564, 1625
AlwNI	CAGNNNCTG	1 cut(s)	313
Aor51HI	AGCGCT	1 cut(s)	1034
AoxI	GGCC	4 cut(s)	261, 532, 1267, 1635
ApeKI	GCWGC	5 cut(s)	368, 608, 778, 1135, 1594
ApoI	RAATTY	3 cut(s)	617, 1387, 1702
AspLEI	GCGC	1 cut(s)	1035
AspS9I	GGNCC	4 cut(s)	262, 916, 1006, 1727
AsuC2I	CCSGG	3 cut(s)	471, 1382, 1690
AsuHPI	GGTGA	3 cut(s)	759, 1076, 1754
AsuII	TTCGAA	2 cut(s)	1183, 1434
AvaII	GGWCC	3 cut(s)	916, 1006, 1727
AxyI	CCTNAGG	1 cut(s)	525
BanII	GRGCYC	1 cut(s)	1823
BbsI	GAAGAC	3 cut(s)	939, 1083, 1542
Bbv12I	GWGCWC	1 cut(s)	1823
BbvI	GCAGC	5 cut(s)	355, 595, 765, 1147, 1606
BccI	CCATC	6 cut(s)	80, 87, 454, 1211, 1270, 1874
BcgI	CGANNNNNNTGC	2 cut(s)	760, 794
BciT130I	CCWGG	2 cut(s)	1266, 1580
BclI	TGATCA	2 cut(s)	1365, 1759
BcnI	CCSGG	3 cut(s)	471, 1382, 1690
BcoDI	GTCTC	2 cut(s)	1151, 1346
BfaI	CTAG	5 cut(s)	6, 176, 605, 1217, 1554
BfmI	CTRYAG	1 cut(s)	609
BfoI	RGCGCY	1 cut(s)	1036
BfrI	CTTAAG	2 cut(s)	566, 1019
BfuAI	ACCTGC	2 cut(s)	1752, 1773
BisI	GCNGC	7 cut(s)	369, 421, 609, 779, 1136, 1595, 1622
BlsI	GCNGC	7 cut(s)	370, 422, 610, 780, 1137, 1596, 1623
BmcAI	AGTACT	1 cut(s)	1415
Bme1390I	CCNGG	5 cut(s)	471, 1266, 1382, 1580, 1690
Bme18I	GGWCC	3 cut(s)	916, 1006, 1727
BmgT120I	GGNCC	4 cut(s)	262, 916, 1006, 1727
BmiI	GGNNCC	2 cut(s)	1008, 1625
BmrFI	CCNGG	5 cut(s)	471, 1266, 1382, 1580, 1690
BmsI	GCATC	5 cut(s)	75, 112, 348, 473, 1480
BoxI	GACNNNNGTC	1 cut(s)	1326
BpiI	GAAGAC	3 cut(s)	939, 1083, 1542
Bpu14I	TTCGAA	2 cut(s)	1183, 1434
BpuMI	CCSGG	3 cut(s)	471, 1382, 1690
BsaBI	GATNNNNATC	3 cut(s)	102, 972, 1562
BsaHI	GRCGYC	1 cut(s)	324
BsaI	GGTCTC	1 cut(s)	1346
BsaJI	CCNNGG	4 cut(s)	495, 1499, 1667, 1679
Bsc4I	CCNNNNNNNGG	7 cut(s)	158, 530, 646, 1276, 1337, 1579, 1633
Bse1I	ACTGG	2 cut(s)	937, 1429
Bse21I	CCTNAGG	1 cut(s)	525
Bse3DI	GCAATG	4 cut(s)	170, 621, 1459, 1504
Bse8I	GATNNNNATC	3 cut(s)	102, 972, 1562
BseBI	CCWGG	2 cut(s)	1266, 1580
BseDI	CCNNGG	4 cut(s)	495, 1499, 1667, 1679
BseGI	GGATG	2 cut(s)	103, 1135
BseJI	GATNNNNATC	3 cut(s)	102, 972, 1562
BseLI	CCNNNNNNNGG	7 cut(s)	158, 530, 646, 1276, 1337, 1579, 1633
BseMI	GCAATG	4 cut(s)	170, 621, 1459, 1504
BseMII	CTCAG	5 cut(s)	28, 384, 516, 1728, 1806
BseNI	ACTGG	2 cut(s)	937, 1429
BseRI	GAGGAG	1 cut(s)	1139
BseXI	GCAGC	5 cut(s)	355, 595, 765, 1147, 1606
BseYI	CCCAGC	1 cut(s)	895
BshFI	GGCC	4 cut(s)	263, 534, 1269, 1637
BsiHKAI	GWGCWC	1 cut(s)	1823
BsiSI	CCGG	5 cut(s)	470, 1004, 1381, 1634, 1690
BslFI	GGGAC	3 cut(s)	335, 441, 1362
BslI	CCNNNNNNNGG	7 cut(s)	158, 530, 646, 1276, 1337, 1579, 1633
BsmAI	GTCTC	2 cut(s)	1151, 1346
BsmFI	GGGAC	3 cut(s)	335, 441, 1362
BsmI	GAATGC	1 cut(s)	575
BsnI	GGCC	4 cut(s)	263, 534, 1269, 1637
Bso31I	GGTCTC	1 cut(s)	1346
Bsp119I	TTCGAA	2 cut(s)	1183, 1434
Bsp1286I	GDGCHC	1 cut(s)	1823
Bsp1407I	TGTACA	1 cut(s)	1405
Bsp143I	GATC	8 cut(s)	440, 793, 973, 1365, 1422, 1569, 1630, 1759
Bsp19I	CCATGG	1 cut(s)	1499
BspACI	CCGC	5 cut(s)	248, 420, 583, 1354, 1621
BspANI	GGCC	4 cut(s)	263, 534, 1269, 1637
BspCNI	CTCAG	5 cut(s)	27, 385, 517, 1729, 1807
BspHI	TCATGA	3 cut(s)	652, 814, 946
BspLI	GGNNCC	2 cut(s)	1008, 1625
BspMAI	CTGCAG	1 cut(s)	613
BspMI	ACCTGC	2 cut(s)	1752, 1773
BspPI	GGATC	5 cut(s)	435, 968, 1417, 1564, 1625
BspQI	GCTCTTC	1 cut(s)	1500
BspT104I	TTCGAA	2 cut(s)	1183, 1434
BspTI	CTTAAG	2 cut(s)	566, 1019
BspTNI	GGTCTC	1 cut(s)	1346
BsrBI	CCGCTC	1 cut(s)	1621
BsrDI	GCAATG	4 cut(s)	170, 621, 1459, 1504
BsrGI	TGTACA	1 cut(s)	1405
BsrI	ACTGG	2 cut(s)	937, 1429
BssECI	CCNNGG	4 cut(s)	495, 1499, 1667, 1679
BssMI	GATC	8 cut(s)	440, 793, 973, 1365, 1422, 1569, 1630, 1759
BssNI	GRCGYC	1 cut(s)	324
BssT1I	CCWWGG	2 cut(s)	495, 1499
Bst2UI	CCWGG	2 cut(s)	1266, 1580
Bst4CI	ACNGT	4 cut(s)	682, 710, 1328, 1340
Bst6I	CTCTTC	5 cut(s)	437, 963, 1001, 1116, 1500
BstACI	GRCGYC	1 cut(s)	324
BstAFI	CTTAAG	2 cut(s)	566, 1019
BstAPI	GCANNNNNTGC	1 cut(s)	1141
BstAUI	TGTACA	1 cut(s)	1405
BstBI	TTCGAA	2 cut(s)	1183, 1434
BstC8I	GCNNGC	1 cut(s)	536
BstDEI	CTNAG	5 cut(s)	14, 393, 525, 1737, 1815
BstDSI	CCRYGG	1 cut(s)	1499
BstEII	GGTNACC	1 cut(s)	890
BstENI	CCTNNNNNAGG	1 cut(s)	1577
BstF5I	GGATG	2 cut(s)	103, 1135
BstH2I	RGCGCY	1 cut(s)	1036
BstHHI	GCGC	1 cut(s)	1035
BstKTI	GATC	8 cut(s)	443, 796, 976, 1368, 1425, 1572, 1633, 1762
BstMAI	GTCTC	2 cut(s)	1151, 1346
BstMBI	GATC	8 cut(s)	440, 793, 973, 1365, 1422, 1569, 1630, 1759
BstMWI	GCNNNNNNNGC	3 cut(s)	1141, 1618, 1780
BstNI	CCWGG	2 cut(s)	1266, 1580
BstNSI	RCATGY	1 cut(s)	1144
BstPAI	GACNNNNGTC	1 cut(s)	1326
BstPI	GGTNACC	1 cut(s)	890
BstSCI	CCNGG	5 cut(s)	469, 1264, 1380, 1578, 1688
BstSFI	CTRYAG	1 cut(s)	609
BstV1I	GCAGC	5 cut(s)	355, 595, 765, 1147, 1606
BstV2I	GAAGAC	3 cut(s)	939, 1083, 1542
BstX2I	RGATCY	2 cut(s)	973, 1569
BstYI	RGATCY	2 cut(s)	973, 1569
Bsu36I	CCTNAGG	1 cut(s)	525
BsuRI	GGCC	4 cut(s)	263, 534, 1269, 1637
BtgI	CCRYGG	1 cut(s)	1499
BtsCI	GGATG	2 cut(s)	103, 1135
BtsI	GCAGTG	1 cut(s)	1803
BtsIMutI	CAGTG	3 cut(s)	715, 1734, 1803
BveI	ACCTGC	2 cut(s)	1752, 1773
Cac8I	GCNNGC	1 cut(s)	536
CaiI	CAGNNNCTG	1 cut(s)	313
CciI	TCATGA	3 cut(s)	652, 814, 946
CfoI	GCGC	1 cut(s)	1035
Cfr13I	GGNCC	4 cut(s)	262, 916, 1006, 1727
CseI	GACGC	4 cut(s)	171, 332, 1511, 1902
Csp6I	GTAC	3 cut(s)	683, 1406, 1414
CviQI	GTAC	3 cut(s)	683, 1406, 1414
DdeI	CTNAG	5 cut(s)	14, 393, 525, 1737, 1815
DpnI	GATC	8 cut(s)	442, 795, 975, 1367, 1424, 1571, 1632, 1761
DpnII	GATC	8 cut(s)	440, 793, 973, 1365, 1422, 1569, 1630, 1759
DrdI	GACNNNNNNGTC	1 cut(s)	1088
DseDI	GACNNNNNNGTC	1 cut(s)	1088
EaeI	YGGCCR	2 cut(s)	532, 1635
Eam1104I	CTCTTC	5 cut(s)	437, 963, 1001, 1116, 1500
EarI	CTCTTC	5 cut(s)	437, 963, 1001, 1116, 1500
EciI	GGCGGA	1 cut(s)	237
Ecl136II	GAGCTC	1 cut(s)	1821
Eco130I	CCWWGG	2 cut(s)	495, 1499
Eco24I	GRGCYC	1 cut(s)	1823
Eco31I	GGTCTC	1 cut(s)	1346
Eco47I	GGWCC	3 cut(s)	916, 1006, 1727
Eco47III	AGCGCT	1 cut(s)	1034
Eco53kI	GAGCTC	1 cut(s)	1821
Eco57I	CTGAAG	3 cut(s)	1095, 1131, 1232
Eco81I	CCTNAGG	1 cut(s)	525
Eco91I	GGTNACC	1 cut(s)	890
EcoICRI	GAGCTC	1 cut(s)	1821
EcoNI	CCTNNNNNAGG	1 cut(s)	1577
EcoO65I	GGTNACC	1 cut(s)	890
EcoRII	CCWGG	2 cut(s)	1264, 1578
EcoT14I	CCWWGG	2 cut(s)	495, 1499
EcoT38I	GRGCYC	1 cut(s)	1823
ErhI	CCWWGG	2 cut(s)	495, 1499
FalI	AAGNNNNNCTT	2 cut(s)	972, 1004
FaqI	GGGAC	3 cut(s)	335, 441, 1362
FauNDI	CATATG	1 cut(s)	1608
FbaI	TGATCA	2 cut(s)	1365, 1759
Fnu4HI	GCNGC	7 cut(s)	369, 421, 609, 779, 1136, 1595, 1622
FokI	GGATG	2 cut(s)	110, 1142
FriOI	GRGCYC	1 cut(s)	1823
Fsp4HI	GCNGC	7 cut(s)	369, 421, 609, 779, 1136, 1595, 1622
FspBI	CTAG	5 cut(s)	6, 176, 605, 1217, 1554
GlaI	GCGC	1 cut(s)	1034
GluI	GCNGC	7 cut(s)	369, 421, 609, 779, 1136, 1595, 1622
GsaI	CCCAGC	1 cut(s)	899
HaeII	RGCGCY	1 cut(s)	1036
HaeIII	GGCC	4 cut(s)	263, 534, 1269, 1637
HapII	CCGG	5 cut(s)	470, 1004, 1381, 1634, 1690
HgaI	GACGC	4 cut(s)	171, 332, 1511, 1902
HhaI	GCGC	1 cut(s)	1035
Hin1I	GRCGYC	1 cut(s)	324
Hin6I	GCGC	1 cut(s)	1033
HinP1I	GCGC	1 cut(s)	1033
HincII	GTYRAC	2 cut(s)	511, 1093
HindII	GTYRAC	2 cut(s)	511, 1093
HindIII	AAGCTT	2 cut(s)	563, 1241
HpaII	CCGG	5 cut(s)	470, 1004, 1381, 1634, 1690
HphI	GGTGA	3 cut(s)	759, 1076, 1754
Hpy166II	GTNNAC	5 cut(s)	355, 511, 637, 942, 1093
Hpy8I	GTNNAC	5 cut(s)	355, 511, 637, 942, 1093
Hpy99I	CGWCG	3 cut(s)	1085, 1100, 1103
HpyAV	CCTTC	3 cut(s)	106, 812, 1179
HpyCH4III	ACNGT	4 cut(s)	682, 710, 1328, 1340
HpyCH4IV	ACGT	2 cut(s)	483, 1906
HpyCH4V	TGCA	7 cut(s)	611, 1144, 1287, 1308, 1362, 1509, 1642
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1141, 1618, 1780
HpyF3I	CTNAG	5 cut(s)	14, 393, 525, 1737, 1815
HpySE526I	ACGT	2 cut(s)	483, 1906
Hsp92I	GRCGYC	1 cut(s)	324
HspAI	GCGC	1 cut(s)	1033
Ksp22I	TGATCA	2 cut(s)	1365, 1759
Kzo9I	GATC	8 cut(s)	440, 793, 973, 1365, 1422, 1569, 1630, 1759
LguI	GCTCTTC	1 cut(s)	1500
LmnI	GCTCC	4 cut(s)	170, 925, 1279, 1629
Lsp1109I	GCAGC	5 cut(s)	355, 595, 765, 1147, 1606
LweI	GCATC	5 cut(s)	75, 112, 348, 473, 1480
MaeI	CTAG	5 cut(s)	6, 176, 605, 1217, 1554
MaeII	ACGT	2 cut(s)	483, 1906
MaeIII	GTNAC	3 cut(s)	453, 733, 890
MalI	GATC	8 cut(s)	442, 795, 975, 1367, 1424, 1571, 1632, 1761
MbiI	CCGCTC	1 cut(s)	1621
MboI	GATC	8 cut(s)	440, 793, 973, 1365, 1422, 1569, 1630, 1759
MflI	RGATCY	2 cut(s)	973, 1569
MhlI	GDGCHC	1 cut(s)	1823
MluCI	AATT	8 cut(s)	23, 142, 552, 617, 671, 825, 1387, 1702
MlyI	GAGTC	4 cut(s)	423, 1079, 1664, 1850
MmeI	TCCRAC	3 cut(s)	894, 1782, 1824
MseI	TTAA	9 cut(s)	567, 615, 869, 885, 990, 1020, 1254, 1614, 1921
MspA1I	CMGCKG	2 cut(s)	899, 1354
MspCI	CTTAAG	2 cut(s)	566, 1019
MspI	CCGG	5 cut(s)	470, 1004, 1381, 1634, 1690
MspR9I	CCNGG	5 cut(s)	471, 1266, 1382, 1580, 1690
Mva1269I	GAATGC	1 cut(s)	575
MvaI	CCWGG	2 cut(s)	1266, 1580
MwoI	GCNNNNNNNGC	3 cut(s)	1141, 1618, 1780
NciI	CCSGG	3 cut(s)	471, 1382, 1690
NcoI	CCATGG	1 cut(s)	1499
NdeI	CATATG	1 cut(s)	1608
NdeII	GATC	8 cut(s)	440, 793, 973, 1365, 1422, 1569, 1630, 1759
NlaIV	GGNNCC	2 cut(s)	1008, 1625
NmeAIII	GCCGAG	1 cut(s)	1692
NmuCI	GTSAC	2 cut(s)	453, 733
NspI	RCATGY	1 cut(s)	1144
NspV	TTCGAA	2 cut(s)	1183, 1434
PagI	TCATGA	3 cut(s)	652, 814, 946
PaqCI	CACCTGC	1 cut(s)	1773
PciSI	GCTCTTC	1 cut(s)	1500
PctI	GAATGC	1 cut(s)	575
PflMI	CCANNNNNTGG	2 cut(s)	158, 1276
PfoI	TCCNGGA	2 cut(s)	469, 1578
PkrI	GCNGC	7 cut(s)	370, 422, 610, 780, 1137, 1596, 1623
PleI	GAGTC	4 cut(s)	423, 1078, 1663, 1849
PpsI	GAGTC	4 cut(s)	423, 1078, 1663, 1849
PshAI	GACNNNNGTC	1 cut(s)	1326
PsiI	TTATAA	1 cut(s)	255
Psp124BI	GAGCTC	1 cut(s)	1823
Psp6I	CCWGG	2 cut(s)	1264, 1578
PspEI	GGTNACC	1 cut(s)	890
PspFI	CCCAGC	1 cut(s)	895
PspGI	CCWGG	2 cut(s)	1264, 1578
PspN4I	GGNNCC	2 cut(s)	1008, 1625
PspPI	GGNCC	4 cut(s)	262, 916, 1006, 1727
PstI	CTGCAG	1 cut(s)	613
PstNI	CAGNNNCTG	1 cut(s)	313
PsuI	RGATCY	2 cut(s)	973, 1569
PvuII	CAGCTG	1 cut(s)	899
RsaI	GTAC	3 cut(s)	684, 1407, 1415
RsaNI	GTAC	3 cut(s)	683, 1406, 1414
SacI	GAGCTC	1 cut(s)	1823
SapI	GCTCTTC	1 cut(s)	1500
SaqAI	TTAA	9 cut(s)	567, 615, 869, 885, 990, 1020, 1254, 1614, 1921
SatI	GCNGC	7 cut(s)	369, 421, 609, 779, 1136, 1595, 1622
Sau3AI	GATC	8 cut(s)	440, 793, 973, 1365, 1422, 1569, 1630, 1759
Sau96I	GGNCC	4 cut(s)	262, 916, 1006, 1727
ScaI	AGTACT	1 cut(s)	1415
SchI	GAGTC	4 cut(s)	423, 1079, 1664, 1850
ScrFI	CCNGG	5 cut(s)	471, 1266, 1382, 1580, 1690
SduI	GDGCHC	1 cut(s)	1823
SfaNI	GCATC	5 cut(s)	75, 112, 348, 473, 1480
SfcI	CTRYAG	1 cut(s)	609
SfuI	TTCGAA	2 cut(s)	1183, 1434
SinI	GGWCC	3 cut(s)	916, 1006, 1727
SmlI	CTYRAG	2 cut(s)	566, 1019
SmoI	CTYRAG	2 cut(s)	566, 1019
Sse9I	AATT	8 cut(s)	23, 142, 552, 617, 671, 825, 1387, 1702
SsiI	CCGC	5 cut(s)	248, 420, 583, 1354, 1621
SspMI	CTAG	5 cut(s)	6, 176, 605, 1217, 1554
SstI	GAGCTC	1 cut(s)	1823
StyD4I	CCNGG	5 cut(s)	469, 1264, 1380, 1578, 1688
StyI	CCWWGG	2 cut(s)	495, 1499
TaaI	ACNGT	4 cut(s)	682, 710, 1328, 1340
TaiI	ACGT	2 cut(s)	486, 1909
TaqI	TCGA	6 cut(s)	71, 282, 1183, 1260, 1418, 1434
TasI	AATT	8 cut(s)	23, 142, 552, 617, 671, 825, 1387, 1702
TatI	WGTACW	3 cut(s)	682, 1405, 1413
TauI	GCSGC	2 cut(s)	423, 1624
Tru1I	TTAA	9 cut(s)	567, 615, 869, 885, 990, 1020, 1254, 1614, 1921
Tru9I	TTAA	9 cut(s)	567, 615, 869, 885, 990, 1020, 1254, 1614, 1921
TscAI	CASTG	3 cut(s)	715, 1741, 1803
TseFI	GTSAC	2 cut(s)	453, 733
TseI	GCWGC	5 cut(s)	368, 608, 778, 1135, 1594
Tsp45I	GTSAC	2 cut(s)	453, 733
TspRI	CASTG	3 cut(s)	715, 1741, 1803
Van91I	CCANNNNNTGG	2 cut(s)	158, 1276
Vha464I	CTTAAG	2 cut(s)	566, 1019
VpaK11BI	GGWCC	3 cut(s)	916, 1006, 1727
XagI	CCTNNNNNAGG	1 cut(s)	1577
XapI	RAATTY	3 cut(s)	617, 1387, 1702
XbaI	TCTAGA	1 cut(s)	1216
XceI	RCATGY	1 cut(s)	1144
XspI	CTAG	5 cut(s)	6, 176, 605, 1217, 1554
ZrmI	AGTACT	1 cut(s)	1415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.