Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002528

Physical Location & Seq

Genomic Coordinates Reverse (-)

81256710 .. 81260171

Gene Structure 3462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G046910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGATGACGAGGATAGGGAACCGACATCATGAAAGGGATCTCAGTGATAGATATGGAAGGTGGAGGGGTGATCGTCAAGATAGGAATCGACACACTTCTGATGAAAATGGTGAGGTCGCAGAAGAAGACAGGGGTGGGCAAGAAAGGGAAAGGAAAAATGAAAATAGGAACAGACAACATAAAAATTGGAATGGTAATTGGGGGAGAGAATATAGAAGTTCTAAGGATTATGAGCGACTGAAGAGATACCGATATGGGAGTGGACATAGAAGGCGGGAGAATGAGGATGGTCATAGAAACAGGGACAGGCATTCACGTCACTACTCTGAGCGCAGGGATGAAAGGGAAGAGCGTAGAACTTCAGAACGGAAAAGGGATAGTAGAGATGATGGTGGGCAAAGTAGGCATAGAAATCGGGATGACGATGGTGAGATCAAGTATCGCAGAAATAAGGAGGTGAATGAAAGACGAGAAGACACTGAGCAGGATGATAGGATGCTTGAGAATTCAAAACCTCAAGGACGGTCAACATTGCAAGAGGGAAATCTGAATACTAATGTGGCAAATTTGGGAAAGAGTGGCGGGGTTTATATTCCGCCCTATAAGTTGGCCCGAGTGATGAAAGAGGTCGAAGATAAAAGTAGCGTTGAGTATCAGCGCTTGACATGGGATGCCCTCCGAAAGAGTATCAATGGGCTTTTGAACAAGGTCACTGCTGCAAACATTAAGAATATAATTCCAGAAATTTTTGCAGAGAATCTCATTCGTGGAAGAGGTCTCTTTTGTCAATCCTGTTTGAAGTCACAGATGGCATATCCAGGATTTACAGACGTCTTTGCTGGCTTGGTGGCTGTTGTTAACACCAAGTTTCCTGAGGTTGGTGAACTTTTGTTGAGAAGAATCGTCTTGCAGCTTAAGAGAGGATTTAAGCCGAACGACAAGCCACAACTACTAGCTCCTGTCAAATTTATCGCGCATCTTGTCAACCAACGAGTGGCTCATGAGATTATAAATCCTATCGATGATGGTGTTGAAGTTGCTGTTGGCTTTGTCAGAGAGTGTGGATCAATACTGCAGGACCTTTCACCTAAAGGGCTCCAAGGCATCTTTGAGCGCTTTCGTGTAATTCTTCATGAAGGAGAAATTGACAAACGAGTTCGGTGGATGATCGAAGACTTATTTGCATTACGGAAGGAAGGTTTCAGGTTGCGTCTAATTTCCTTCGCCATGGGGCACCCAGCTGTTCGTCCAGAACTGGACCTTGTTGAGCAAGAAGACCAGTTCACTCATGATATTTCTCTTCAACAGGAGATAAATCCAGAAATTACCCTTGATATTTTCGAGCCTGATCCTGATTTCATTGAGAATGAGAAGCGCTATGAAGATGTGAAGAAAACAATTCTTGCTTCAGATGAGCAGGAAATGAAAATAAGAGATGAGACGGAGACGGAGACGGAGACCAATCTTGTGAATCTTCGAAGGACAATATATCTGACTATCATGTCCGGTGTAGATTTTGAGGAAGCAGGTCATCAGCTCCTTAAGATTAAGCTTGAGCCAGGCCAAGAGATGGAGCTATGTGTCATGCTTTTGGAATGTTGCAGTCAGGAGAGAACCTACCTCCGCTATTATGGTCTCTTGGGACAGCGGCTCTGCATGATCAACAGAATCCACCAGGAAAATTTTGAGAAATGTTATGTCCAGCAGTATTCAATGATTCACCGGCTTGAAACAAACAAGCTACGTAATGTAGCCAAGTTTTTTGCGCATTTACTGGGAACAGATGCCCTTCCGTGGCATTGCTTAGCCTATATACGGTTAACTGAAGAGGATACCACTTATTCTTCTCGTATTTTTATCAAGATCCTTTTCCAGGAATTGTCAGAGCATCTTGGTATCCGTCTGCTTAATGAGCGGTTGACTGATCCTGCAATGCAAGACTCTTGCGAATCTATTTTCCCAAGGGATAATCCCAAGAACACCCGGTTTGCTATCAACTTTTTCACATCCATTGGGCTTGGCGGCATAACTGAGAACCTGCGTGAGTATCTGAAGCACATGCCACGCCTTATTATGCAACAACAAAAAGCAGCGTCAGATGAAGAATCCGACAGTTCTGGTTCATTGGATTCGGACTCGAACTCAGGGTCGGCTTGTTCCGAGTCAGAATCAGAATCAGAACCGTCAAGCTCTGAAAGACGCAAGAAGAAACGTAGGAGGAGAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071006 GO:0071012 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

742

Amino Acids

87.0

Weight (kDa)

7.08

Isoelectric Point (pI)

58.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	228 - 398	4e-07	MIF4G domain
MA3	PF02847	492 - 598	9.8e-29	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80930
fragaria_vesca	FvH4_3g01450 FvH4_3g43230 FvH4_3g43240 FvH4_3g43240
malus_domestica	MD03G1023500.v1.1 MD11G1028600.v1.1
prunus_persica	Prupe.6G022700_v2.0.a1 Prupe.6G022700_v2.0.a1
pyrus_communis	pycom03g02010 pycom11g02210
rosa_chinensis	RchiOBHm_Chr5g0002291 RchiOBHm_Chr5g0077281 RchiOBHm_Chr5g0077291
rosa_laevigata	RLG00000031014 RLG00000036681 RLG00000036682
rosa_multiflora	Rmu_co8446135.1_g000001 Rmu_sc0000433.1_g000042 Rmu_sc0001492.1_g000008 Rmu_sc0005576.1_g000001 Rmu_sc0006137.1_g000009 Rmu_sc0008383.1_g000001 Rmu_sc0013155.1_g000012 Rmu_ssc0000410.1_g000040
rosa_roxburghii	Rroxscaffold_1G00004680 Rroxscaffold_1G00073650
rosa_rugosa	Rorug04G0394900 Rorug05G0453500
rosa_samantha	Rh5AG017700 Rh5AG508400 Rh5AG508500 Rh5BG020300 Rh5BG529600 Rh5CG019100 Rh5CG019400 Rh5CG554100 Rh5DG018300 Rh5DG542200
rosa_wichuraiana	Rw5G046900 Rw5G046910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1010
AasI	GACNNNNNNGTC	1 cut(s)	1501
AatII	GACGTC	1 cut(s)	834
Acc16I	TGCGCA	1 cut(s)	1767
Acc36I	ACCTGC	2 cut(s)	1517, 2046
AccB1I	GGYRCC	1 cut(s)	1233
AccB7I	CCANNNNNTGG	2 cut(s)	994, 1570
AccBSI	CCGCTC	1 cut(s)	1915
AccII	CGCG	1 cut(s)	974
AciI	CCGC	7 cut(s)	274, 582, 596, 1624, 1648, 1915, 2022
AclWI	GGATC	5 cut(s)	45, 1072, 1343, 1858, 1919
AcsI	RAATTY	5 cut(s)	505, 565, 744, 965, 1681
AcuI	CTGAAG	5 cut(s)	260, 345, 1392, 1845, 2072
AcyI	GRCGYC	1 cut(s)	831
AfeI	AGCGCT	3 cut(s)	659, 1115, 1376
AfiI	CCNNNNNNNGG	6 cut(s)	878, 994, 1570, 1794, 1815, 1873
AflII	CTTAAG	2 cut(s)	914, 1541
AgsI	TTSAA	7 cut(s)	510, 703, 799, 1034, 1304, 1713, 1730
AjiI	CACGTC	1 cut(s)	317
AjnI	CCWGG	4 cut(s)	817, 1558, 1674, 1872
AjuI	GAANNNNNNNTTGG	2 cut(s)	1026, 1058
AluBI	AGCT	8 cut(s)	913, 956, 1241, 1537, 1552, 1576, 1741, 2190
AluI	AGCT	8 cut(s)	913, 956, 1241, 1537, 1552, 1576, 1741, 2190
Alw26I	GTCTC	6 cut(s)	782, 1433, 1439, 1445, 1451, 1640
AlwI	GGATC	5 cut(s)	45, 1072, 1343, 1858, 1919
Ama87I	CYCGRG	1 cut(s)	612
Aor51HI	AGCGCT	3 cut(s)	659, 1115, 1376
AoxI	GGCC	2 cut(s)	609, 1561
ApeKI	GCWGC	3 cut(s)	716, 910, 2090
ApoI	RAATTY	5 cut(s)	505, 565, 744, 965, 1681
ArsI	GACNNNNNNTTYG	2 cut(s)	2132, 2164
AspLEI	GCGC	6 cut(s)	333, 660, 976, 1116, 1377, 1768
AspS9I	GGNCC	3 cut(s)	610, 1078, 1258
AsuC2I	CCSGG	1 cut(s)	1984
AsuHPI	GGTGA	7 cut(s)	80, 122, 440, 469, 893, 1077, 1712
AsuII	TTCGAA	1 cut(s)	1477
AvaI	CYCGRG	1 cut(s)	612
AvaII	GGWCC	2 cut(s)	1078, 1258
AxyI	CCTNAGG	1 cut(s)	873
BaeGI	GKGCMC	1 cut(s)	1236
BanI	GGYRCC	1 cut(s)	1233
BanII	GRGCYC	1 cut(s)	1098
BbsI	GAAGAC	4 cut(s)	132, 480, 1179, 1281
BbvI	GCAGC	3 cut(s)	703, 922, 2102
BccI	CCATC	6 cut(s)	281, 383, 419, 802, 1019, 1564
BcgI	CGANNNNNNTGC	2 cut(s)	395, 429
BciT130I	CCWGG	4 cut(s)	819, 1560, 1676, 1874
BciVI	GTATCC	2 cut(s)	1825, 1907
BclI	TGATCA	1 cut(s)	1659
BcnI	CCSGG	1 cut(s)	1984
BcoDI	GTCTC	6 cut(s)	782, 1433, 1439, 1445, 1451, 1640
BfaI	CTAG	1 cut(s)	953
BfmI	CTRYAG	1 cut(s)	1073
BfoI	RGCGCY	3 cut(s)	661, 1117, 1378
BfrI	CTTAAG	2 cut(s)	914, 1541
BfuAI	ACCTGC	2 cut(s)	1517, 2046
BfuI	GTATCC	2 cut(s)	1825, 1907
BisI	GCNGC	5 cut(s)	717, 911, 1649, 2023, 2091
BlpI	GCTNAGC	1 cut(s)	1804
BlsI	GCNGC	5 cut(s)	718, 912, 1650, 2024, 2092
Bme1390I	CCNGG	5 cut(s)	819, 1560, 1676, 1874, 1984
Bme18I	GGWCC	2 cut(s)	1078, 1258
BmeT110I	CYCGRG	1 cut(s)	612
BmgBI	CACGTC	1 cut(s)	317
BmgT120I	GGNCC	3 cut(s)	610, 1078, 1258
BmiI	GGNNCC	3 cut(s)	20, 1097, 1235
BmrFI	CCNGG	5 cut(s)	819, 1560, 1676, 1874, 1984
BmrI	ACTGGG	1 cut(s)	1784
BmsI	GCATC	6 cut(s)	486, 661, 985, 1113, 1774, 1897
BmuI	ACTGGG	1 cut(s)	1784
BpiI	GAAGAC	4 cut(s)	132, 480, 1179, 1281
Bpu1102I	GCTNAGC	1 cut(s)	1804
Bpu14I	TTCGAA	1 cut(s)	1477
BpuEI	CTTGAG	3 cut(s)	501, 521, 1574
BpuMI	CCSGG	1 cut(s)	1984
Bsa29I	ATCGAT	1 cut(s)	1020
BsaAI	YACGTR	1 cut(s)	1745
BsaBI	GATNNNNATC	1 cut(s)	84
BsaHI	GRCGYC	1 cut(s)	831
BsaI	GGTCTC	3 cut(s)	782, 1451, 1640
BsaJI	CCNNGG	4 cut(s)	1099, 1227, 1793, 1961
BsaWI	WCCGGW	1 cut(s)	1505
Bsc4I	CCNNNNNNNGG	6 cut(s)	878, 994, 1570, 1794, 1815, 1873
Bse118I	RCCGGY	1 cut(s)	1722
Bse1I	ACTGG	3 cut(s)	1260, 1279, 1779
Bse21I	CCTNAGG	1 cut(s)	873
Bse3DI	GCAATG	3 cut(s)	530, 1798, 1938
Bse8I	GATNNNNATC	1 cut(s)	84
BseBI	CCWGG	4 cut(s)	819, 1560, 1676, 1874
BseCI	ATCGAT	1 cut(s)	1020
BseDI	CCNNGG	4 cut(s)	1099, 1227, 1793, 1961
BseGI	GGATG	8 cut(s)	292, 343, 424, 493, 501, 676, 1170, 2006
BseJI	GATNNNNATC	1 cut(s)	84
BseLI	CCNNNNNNNGG	6 cut(s)	878, 994, 1570, 1794, 1815, 1873
BseMI	GCAATG	3 cut(s)	530, 1798, 1938
BseMII	CTCAG	6 cut(s)	55, 318, 471, 864, 2022, 2157
BseNI	ACTGG	3 cut(s)	1260, 1279, 1779
BseSI	GKGCMC	1 cut(s)	1236
BseXI	GCAGC	3 cut(s)	703, 922, 2102
BseYI	CCCAGC	1 cut(s)	1237
Bsh1236I	CGCG	1 cut(s)	974
BshFI	GGCC	2 cut(s)	611, 1563
BshNI	GGYRCC	1 cut(s)	1233
BshVI	ATCGAT	1 cut(s)	1020
BsiHKCI	CYCGRG	1 cut(s)	612
BsiSI	CCGG	3 cut(s)	1506, 1723, 1984
BslFI	GGGAC	2 cut(s)	317, 1656
BslI	CCNNNNNNNGG	6 cut(s)	878, 994, 1570, 1794, 1815, 1873
BsmAI	GTCTC	6 cut(s)	782, 1433, 1439, 1445, 1451, 1640
BsmBI	CGTCTC	3 cut(s)	1433, 1439, 1445
BsmFI	GGGAC	2 cut(s)	317, 1656
BsmI	GAATGC	1 cut(s)	310
BsnI	GGCC	2 cut(s)	611, 1563
Bso31I	GGTCTC	3 cut(s)	782, 1451, 1640
BsoBI	CYCGRG	1 cut(s)	612
Bsp119I	TTCGAA	1 cut(s)	1477
Bsp1286I	GDGCHC	2 cut(s)	1098, 1236
Bsp143I	GATC	9 cut(s)	37, 70, 432, 1064, 1167, 1348, 1659, 1863, 1924
Bsp1720I	GCTNAGC	1 cut(s)	1804
Bsp19I	CCATGG	1 cut(s)	1227
BspACI	CCGC	7 cut(s)	274, 582, 596, 1624, 1648, 1915, 2022
BspANI	GGCC	2 cut(s)	611, 1563
BspCNI	CTCAG	6 cut(s)	54, 319, 472, 865, 2023, 2156
BspDI	ATCGAT	1 cut(s)	1020
BspFNI	CGCG	1 cut(s)	974
BspHI	TCATGA	4 cut(s)	28, 1000, 1132, 1288
BspLI	GGNNCC	3 cut(s)	20, 1097, 1235
BspMAI	CTGCAG	1 cut(s)	1077
BspMI	ACCTGC	2 cut(s)	1517, 2046
BspPI	GGATC	5 cut(s)	45, 1072, 1343, 1858, 1919
BspQI	GCTCTTC	1 cut(s)	342
BspT104I	TTCGAA	1 cut(s)	1477
BspT107I	GGYRCC	1 cut(s)	1233
BspTI	CTTAAG	2 cut(s)	914, 1541
BspTNI	GGTCTC	3 cut(s)	782, 1451, 1640
BsrBI	CCGCTC	1 cut(s)	1915
BsrDI	GCAATG	3 cut(s)	530, 1798, 1938
BsrFI	RCCGGY	1 cut(s)	1722
BsrI	ACTGG	3 cut(s)	1260, 1279, 1779
BssAI	RCCGGY	1 cut(s)	1722
BssECI	CCNNGG	4 cut(s)	1099, 1227, 1793, 1961
BssMI	GATC	9 cut(s)	37, 70, 432, 1064, 1167, 1348, 1659, 1863, 1924
BssNI	GRCGYC	1 cut(s)	831
BssT1I	CCWWGG	3 cut(s)	1099, 1227, 1961
Bst2UI	CCWGG	4 cut(s)	819, 1560, 1676, 1874
Bst4CI	ACNGT	4 cut(s)	525, 1818, 2114, 2184
Bst6I	CTCTTC	5 cut(s)	236, 342, 766, 1305, 1821
BstACI	GRCGYC	1 cut(s)	831
BstAFI	CTTAAG	2 cut(s)	914, 1541
BstBAI	YACGTR	1 cut(s)	1745
BstBI	TTCGAA	1 cut(s)	1477
BstC8I	GCNNGC	1 cut(s)	841
BstDEI	CTNAG	8 cut(s)	41, 222, 327, 480, 873, 1804, 2031, 2143
BstDSI	CCRYGG	2 cut(s)	1227, 1793
BstENI	CCTNNNNNAGG	1 cut(s)	1871
BstF5I	GGATG	8 cut(s)	292, 343, 424, 493, 501, 676, 1170, 2006
BstFNI	CGCG	1 cut(s)	974
BstH2I	RGCGCY	3 cut(s)	661, 1117, 1378
BstHHI	GCGC	6 cut(s)	333, 660, 976, 1116, 1377, 1768
BstKTI	GATC	9 cut(s)	40, 73, 435, 1067, 1170, 1351, 1662, 1866, 1927
BstMAI	GTCTC	6 cut(s)	782, 1433, 1439, 1445, 1451, 1640
BstMBI	GATC	9 cut(s)	37, 70, 432, 1064, 1167, 1348, 1659, 1863, 1924
BstMWI	GCNNNNNNNGC	2 cut(s)	403, 1912
BstNI	CCWGG	4 cut(s)	819, 1560, 1676, 1874
BstNSI	RCATGY	1 cut(s)	2062
BstSCI	CCNGG	5 cut(s)	817, 1558, 1674, 1872, 1982
BstSFI	CTRYAG	1 cut(s)	1073
BstSLI	GKGCMC	1 cut(s)	1236
BstSNI	TACGTA	1 cut(s)	1745
BstUI	CGCG	1 cut(s)	974
BstV1I	GCAGC	3 cut(s)	703, 922, 2102
BstV2I	GAAGAC	4 cut(s)	132, 480, 1179, 1281
BstX2I	RGATCY	2 cut(s)	37, 1863
BstYI	RGATCY	2 cut(s)	37, 1863
Bsu15I	ATCGAT	1 cut(s)	1020
Bsu36I	CCTNAGG	1 cut(s)	873
BsuI	GTATCC	2 cut(s)	1825, 1907
BsuRI	GGCC	2 cut(s)	611, 1563
BsuTUI	ATCGAT	1 cut(s)	1020
BtgI	CCRYGG	2 cut(s)	1227, 1793
BtrI	CACGTC	1 cut(s)	317
BtsCI	GGATG	8 cut(s)	292, 343, 424, 493, 501, 676, 1170, 2006
BtsI	GCAGTG	1 cut(s)	711
BtsIMutI	CAGTG	3 cut(s)	49, 477, 711
BveI	ACCTGC	2 cut(s)	1517, 2046
Cac8I	GCNNGC	1 cut(s)	841
CciI	TCATGA	4 cut(s)	28, 1000, 1132, 1288
CfoI	GCGC	6 cut(s)	333, 660, 976, 1116, 1377, 1768
Cfr10I	RCCGGY	1 cut(s)	1722
Cfr13I	GGNCC	3 cut(s)	610, 1078, 1258
ClaI	ATCGAT	1 cut(s)	1020
CseI	GACGC	3 cut(s)	1199, 2082, 2208
DdeI	CTNAG	8 cut(s)	41, 222, 327, 480, 873, 1804, 2031, 2143
DpnI	GATC	9 cut(s)	39, 72, 434, 1066, 1169, 1350, 1661, 1865, 1926
DpnII	GATC	9 cut(s)	37, 70, 432, 1064, 1167, 1348, 1659, 1863, 1924
DrdI	GACNNNNNNGTC	1 cut(s)	1501
DseDI	GACNNNNNNGTC	1 cut(s)	1501
Eam1104I	CTCTTC	5 cut(s)	236, 342, 766, 1305, 1821
EarI	CTCTTC	5 cut(s)	236, 342, 766, 1305, 1821
EciI	GGCGGA	1 cut(s)	585
Eco105I	TACGTA	1 cut(s)	1745
Eco130I	CCWWGG	3 cut(s)	1099, 1227, 1961
Eco24I	GRGCYC	1 cut(s)	1098
Eco31I	GGTCTC	3 cut(s)	782, 1451, 1640
Eco47I	GGWCC	2 cut(s)	1078, 1258
Eco47III	AGCGCT	3 cut(s)	659, 1115, 1376
Eco57I	CTGAAG	5 cut(s)	260, 345, 1392, 1845, 2072
Eco81I	CCTNAGG	1 cut(s)	873
Eco88I	CYCGRG	1 cut(s)	612
EcoNI	CCTNNNNNAGG	1 cut(s)	1871
EcoO109I	RGGNCCY	1 cut(s)	1078
EcoRI	GAATTC	1 cut(s)	505
EcoRII	CCWGG	4 cut(s)	817, 1558, 1674, 1872
EcoT14I	CCWWGG	3 cut(s)	1099, 1227, 1961
EcoT38I	GRGCYC	1 cut(s)	1098
ErhI	CCWWGG	3 cut(s)	1099, 1227, 1961
Esp3I	CGTCTC	3 cut(s)	1433, 1439, 1445
FaqI	GGGAC	2 cut(s)	317, 1656
FauI	CCCGC	2 cut(s)	267, 575
FbaI	TGATCA	1 cut(s)	1659
Fnu4HI	GCNGC	5 cut(s)	717, 911, 1649, 2023, 2091
FokI	GGATG	8 cut(s)	299, 350, 431, 500, 508, 683, 1177, 1993
FriOI	GRGCYC	1 cut(s)	1098
Fsp4HI	GCNGC	5 cut(s)	717, 911, 1649, 2023, 2091
FspBI	CTAG	1 cut(s)	953
FspI	TGCGCA	1 cut(s)	1767
GlaI	GCGC	6 cut(s)	332, 659, 975, 1115, 1376, 1767
GluI	GCNGC	5 cut(s)	717, 911, 1649, 2023, 2091
GsaI	CCCAGC	1 cut(s)	1241
HaeII	RGCGCY	3 cut(s)	661, 1117, 1378
HaeIII	GGCC	2 cut(s)	611, 1563
HapII	CCGG	3 cut(s)	1506, 1723, 1984
HgaI	GACGC	3 cut(s)	1199, 2082, 2208
HhaI	GCGC	6 cut(s)	333, 660, 976, 1116, 1377, 1768
Hin1I	GRCGYC	1 cut(s)	831
Hin6I	GCGC	6 cut(s)	331, 658, 974, 1114, 1375, 1766
HinP1I	GCGC	6 cut(s)	331, 658, 974, 1114, 1375, 1766
HincII	GTYRAC	5 cut(s)	528, 859, 985, 1821, 1920
HindII	GTYRAC	5 cut(s)	528, 859, 985, 1821, 1920
HindIII	AAGCTT	1 cut(s)	1550
HpaI	GTTAAC	2 cut(s)	859, 1821
HpaII	CCGG	3 cut(s)	1506, 1723, 1984
HphI	GGTGA	7 cut(s)	80, 122, 440, 469, 893, 1077, 1712
Hpy166II	GTNNAC	8 cut(s)	263, 528, 859, 884, 985, 1284, 1821, 1920
Hpy8I	GTNNAC	8 cut(s)	263, 528, 859, 884, 985, 1284, 1821, 1920
HpyAV	CCTTC	8 cut(s)	51, 264, 1130, 1186, 1190, 1231, 1473, 1799
HpyCH4III	ACNGT	4 cut(s)	525, 1818, 2114, 2184
HpyCH4IV	ACGT	4 cut(s)	316, 831, 1744, 2212
HpyF10VI	GCNNNNNNNGC	2 cut(s)	403, 1912
HpyF3I	CTNAG	8 cut(s)	41, 222, 327, 480, 873, 1804, 2031, 2143
HpySE526I	ACGT	4 cut(s)	316, 831, 1744, 2212
Hsp92I	GRCGYC	1 cut(s)	831
HspAI	GCGC	6 cut(s)	331, 658, 974, 1114, 1375, 1766
Ksp22I	TGATCA	1 cut(s)	1659
KspAI	GTTAAC	2 cut(s)	859, 1821
Kzo9I	GATC	9 cut(s)	37, 70, 432, 1064, 1167, 1348, 1659, 1863, 1924
LguI	GCTCTTC	1 cut(s)	342
LmnI	GCTCC	4 cut(s)	961, 1101, 1542, 1573
Lsp1109I	GCAGC	3 cut(s)	703, 922, 2102
LweI	GCATC	6 cut(s)	486, 661, 985, 1113, 1774, 1897
MaeI	CTAG	1 cut(s)	953
MaeII	ACGT	4 cut(s)	316, 831, 1744, 2212
MaeIII	GTNAC	3 cut(s)	317, 709, 801
MalI	GATC	9 cut(s)	39, 72, 434, 1066, 1169, 1350, 1661, 1865, 1926
MbiI	CCGCTC	1 cut(s)	1915
MboI	GATC	9 cut(s)	37, 70, 432, 1064, 1167, 1348, 1659, 1863, 1924
MflI	RGATCY	2 cut(s)	37, 1863
MhlI	GDGCHC	2 cut(s)	1098, 1236
MlyI	GAGTC	3 cut(s)	1934, 2129, 2171
MmeI	TCCRAC	1 cut(s)	2133
MseI	TTAA	9 cut(s)	726, 858, 915, 927, 1542, 1548, 1820, 1908, 2227
MspA1I	CMGCKG	2 cut(s)	1241, 1648
MspCI	CTTAAG	2 cut(s)	914, 1541
MspI	CCGG	3 cut(s)	1506, 1723, 1984
MspR9I	CCNGG	5 cut(s)	819, 1560, 1676, 1874, 1984
Mva1269I	GAATGC	1 cut(s)	310
MvaI	CCWGG	4 cut(s)	819, 1560, 1676, 1874
MvnI	CGCG	1 cut(s)	974
MwoI	GCNNNNNNNGC	2 cut(s)	403, 1912
NciI	CCSGG	1 cut(s)	1984
NcoI	CCATGG	1 cut(s)	1227
NdeII	GATC	9 cut(s)	37, 70, 432, 1064, 1167, 1348, 1659, 1863, 1924
NlaIV	GGNNCC	3 cut(s)	20, 1097, 1235
NmuCI	GTSAC	3 cut(s)	317, 709, 801
NsbI	TGCGCA	1 cut(s)	1767
NspI	RCATGY	1 cut(s)	2062
NspV	TTCGAA	1 cut(s)	1477
PagI	TCATGA	4 cut(s)	28, 1000, 1132, 1288
PciSI	GCTCTTC	1 cut(s)	342
PctI	GAATGC	1 cut(s)	310
PflMI	CCANNNNNTGG	2 cut(s)	994, 1570
PfoI	TCCNGGA	2 cut(s)	817, 1872
PkrI	GCNGC	5 cut(s)	718, 912, 1650, 2024, 2092
PleI	GAGTC	3 cut(s)	1934, 2129, 2170
PpsI	GAGTC	3 cut(s)	1934, 2129, 2170
Ppu21I	YACGTR	1 cut(s)	1745
PpuMI	RGGWCCY	1 cut(s)	1078
PsiI	TTATAA	1 cut(s)	1010
Psp5II	RGGWCCY	1 cut(s)	1078
Psp6I	CCWGG	4 cut(s)	817, 1558, 1674, 1872
PspFI	CCCAGC	1 cut(s)	1237
PspGI	CCWGG	4 cut(s)	817, 1558, 1674, 1872
PspN4I	GGNNCC	3 cut(s)	20, 1097, 1235
PspPI	GGNCC	3 cut(s)	610, 1078, 1258
PspPPI	RGGWCCY	1 cut(s)	1078
PstI	CTGCAG	1 cut(s)	1077
PsuI	RGATCY	2 cut(s)	37, 1863
PvuII	CAGCTG	1 cut(s)	1241
SapI	GCTCTTC	1 cut(s)	342
SaqAI	TTAA	9 cut(s)	726, 858, 915, 927, 1542, 1548, 1820, 1908, 2227
SatI	GCNGC	5 cut(s)	717, 911, 1649, 2023, 2091
Sau3AI	GATC	9 cut(s)	37, 70, 432, 1064, 1167, 1348, 1659, 1863, 1924
Sau96I	GGNCC	3 cut(s)	610, 1078, 1258
SchI	GAGTC	3 cut(s)	1934, 2129, 2171
ScrFI	CCNGG	5 cut(s)	819, 1560, 1676, 1874, 1984
SduI	GDGCHC	2 cut(s)	1098, 1236
SfaNI	GCATC	6 cut(s)	486, 661, 985, 1113, 1774, 1897
SfcI	CTRYAG	1 cut(s)	1073
SfuI	TTCGAA	1 cut(s)	1477
SinI	GGWCC	2 cut(s)	1078, 1258
SmlI	CTYRAG	5 cut(s)	500, 516, 914, 1541, 1553
SmoI	CTYRAG	5 cut(s)	500, 516, 914, 1541, 1553
SnaBI	TACGTA	1 cut(s)	1745
SsiI	CCGC	7 cut(s)	274, 582, 596, 1624, 1648, 1915, 2022
SspMI	CTAG	1 cut(s)	953
StyD4I	CCNGG	5 cut(s)	817, 1558, 1674, 1872, 1982
StyI	CCWWGG	3 cut(s)	1099, 1227, 1961
TaaI	ACNGT	4 cut(s)	525, 1818, 2114, 2184
TaiI	ACGT	4 cut(s)	319, 834, 1747, 2215
TaqI	TCGA	7 cut(s)	88, 630, 1020, 1170, 1341, 1477, 2138
TauI	GCSGC	2 cut(s)	1651, 2025
Tru1I	TTAA	9 cut(s)	726, 858, 915, 927, 1542, 1548, 1820, 1908, 2227
Tru9I	TTAA	9 cut(s)	726, 858, 915, 927, 1542, 1548, 1820, 1908, 2227
TscAI	CASTG	3 cut(s)	49, 484, 718
TseFI	GTSAC	3 cut(s)	317, 709, 801
TseI	GCWGC	3 cut(s)	716, 910, 2090
Tsp45I	GTSAC	3 cut(s)	317, 709, 801
TspGWI	ACGGA	7 cut(s)	382, 1204, 1457, 1463, 1469, 1782, 1889
TspRI	CASTG	3 cut(s)	49, 484, 718
Van91I	CCANNNNNTGG	2 cut(s)	994, 1570
Vha464I	CTTAAG	2 cut(s)	914, 1541
VpaK11BI	GGWCC	2 cut(s)	1078, 1258
XagI	CCTNNNNNAGG	1 cut(s)	1871
XapI	RAATTY	5 cut(s)	505, 565, 744, 965, 1681
XceI	RCATGY	1 cut(s)	2062
XspI	CTAG	1 cut(s)	953
ZraI	GACGTC	1 cut(s)	832

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.