Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002528

Physical Location & Seq

Genomic Coordinates Reverse (-)

56099921 .. 56103342

Gene Structure 3422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0394900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGAAGTTTGGGAAGGAGTTCAAGAAACAAATGGTGCCCGGGTGGGCAGAAGCCTACATGGATTATAATGGCCTCAAGAGGATATTGCGAGAGCTAAGAGAGTACAAGCAAAGTAAGCAGCACCCTGCTGTGACATCTTCTAGAGACTTTGAGCAGAAACCGCTTCCTGACGGAACATTGAATGGAGGAGGAGATGTCGAGGACCAAGTAATAGATGTGAACACATTGCGTGGAGGTGGTTCCAAGCAGTTTTATAAGACCAAGTTCTTGAGGCCGTCAGAGGAAGGAGGAGAAATTGAGGTGACATTCTTCAGAAAACTTGACGAAGAGCTCAACAAGGTCAATACATTTTACAAGGAAAAATTGGAGGAGGTGAAGCAGGAAGCAAGTCAGTTGAATAAACAAATGGATGCTTTGGTTGCACTGAGGATTAAGATGAAGATTCCGCATCAAGATGGCTCAAGTTCAGGGAGGCATGACAATGTTGATTCTCCAATGCCTCTTGCAAGGAACACAAATGCACCTGATACTTCAGGAGTTGAGCTTAGGGCATTGGAATCTGGAGTAAAAGCAAATGATAAGGATCAGCAAGAACCATGCCCTGGTGCCTCAGTTGCTGATCCACCACATGCTAACATTTCTAGAAGTGATAGCAGAGAGGTGTTGCATACCTATGACTATAGCCAAGATCCTCTGGAAATTCTTGAGGGTGTGAGAATTAATAATACACTTGAATCTTCAATATCAACCATCAAAGGTGTTTTTAAGGACTCAAAAGAAGAGCAGTTGAGCTTTGATAAAGAGGAGCTGAGGAGAGCGGAAGAACGACCAAGGGTGGCATTTATTGAATTTTACCATAAGCTTCAACTTCTAAAGCACAACAGTTTTATGAACCTCTCTGCATTTTCCAAGATTATGAAGAAGTACGAAAAGTTCTCATCAAGGAGAGCATCCAGGTCATACATGCAAATAGTAGACAACTCTGATCTTGGAAATTCTGATGAGGTTACTAACCTCATGGAGAGGGTGGAGGCTACCTTCATCAAGAATTTTTCACACTCAAATCGTAGAAAAGGTATGACGTTACTGAGGCCAAAAGCAAAACGAGAGAAGCACAAAGTATCGTTTTTATCGGGTTTCTTTTCTGGCTGCTCAATTGCTCTACTGGTTGCTATTGTATTAAGAATACAAGCTCGAAAAATAACGAATAAGAAGGAGGGCACACATTTATTTGGATACATTGTCCTACATTTGCTCATGCATGCTGGCGATATATACTTCTGGAGGCGTTATCGGATAAACTATCCATTTATATTTGGTTTTGAGAAAGGAACTGAGTTGAGTTACCGAGAAGTTTTCCTTCTCAGCACTGGTCTTGCAGTACTTGCATTGGGCGGTTTCCTAGCAAACTTACACTTGGAAATGGACTCGAGTGGTAAACATTACAAGACAGTCAATCAGATGATTCCTTTGGGCTTACTTATTGAGACATTCTCAGACTTTTTCTTGGCAGACCAGCTTACTAGCCAGATGCAAACCTTGAGCAGTTTTGTGTTATACATCTGCTACTATGGTTTGGGAGAATATTCAAGGAGGCAAAGCAAGTGCCATGAGCACGGCGTCTACAATACTTTGTATATTGTTATTGCTGTCATACCATTTTGGATGCGCTTCCTGCAGTGCATTCGTCGACTGTGTGAAGAAAAGGATTTGAAGCACTTGTGCAGGGGTTTAAAGTACTTTTCGACGATTGTTGCAGTTATCGTAAGAACTGTTTATGAGCTGAAAAAAGGAAAGACCTCCTGGATGGTGTTAGCTTTGATCAGCTCTCCTGTTGCAACAAAGATGAATACATATTGGGACATTGTAGTAGACTGGGGACTTCTACAAAAGCGATCAAAGAACAAATTTTTGAGAGATAGACTTCAAGTTCACAGAAGGGCGTGTATTTTGCAGCTATGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071006 GO:0071012 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

654

Amino Acids

75.45

Weight (kDa)

9.35

Isoelectric Point (pI)

52.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPX	PF03105	1 - 48	2.2e-12	SPX domain
SPX	PF03105	64 - 323	3.2e-43	SPX domain
EXS	PF03124	410 - 494	1.9e-10	EXS family
EXS	PF03124	495 - 646	1.3e-40	EXS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80930
fragaria_vesca	FvH4_3g01450 FvH4_3g43230 FvH4_3g43240 FvH4_3g43240
malus_domestica	MD03G1023500.v1.1 MD11G1028600.v1.1
prunus_persica	Prupe.6G022700_v2.0.a1 Prupe.6G022700_v2.0.a1
pyrus_communis	pycom03g02010 pycom11g02210
rosa_chinensis	RchiOBHm_Chr5g0002291 RchiOBHm_Chr5g0077281 RchiOBHm_Chr5g0077291
rosa_laevigata	RLG00000031014 RLG00000036681 RLG00000036682
rosa_multiflora	Rmu_co8446135.1_g000001 Rmu_sc0000433.1_g000042 Rmu_sc0001492.1_g000008 Rmu_sc0005576.1_g000001 Rmu_sc0006137.1_g000009 Rmu_sc0008383.1_g000001 Rmu_sc0013155.1_g000012 Rmu_ssc0000410.1_g000040
rosa_roxburghii	Rroxscaffold_1G00004680 Rroxscaffold_1G00073650
rosa_rugosa	Rorug04G0394900 Rorug05G0453500
rosa_samantha	Rh5AG017700 Rh5AG508400 Rh5AG508500 Rh5BG020300 Rh5BG529600 Rh5CG019100 Rh5CG019400 Rh5CG554100 Rh5DG018300 Rh5DG542200
rosa_wichuraiana	Rw5G046900 Rw5G046910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	66, 255
AccB1I	GGYRCC	2 cut(s)	34, 605
AccB7I	CCANNNNNTGG	1 cut(s)	602
AccBSI	CCGCTC	1 cut(s)	818
AccI	GTMKAC	4 cut(s)	975, 1623, 1690, 1872
AciI	CCGC	4 cut(s)	161, 446, 818, 1395
AclWI	GGATC	3 cut(s)	591, 614, 683
AcsI	RAATTY	5 cut(s)	699, 848, 994, 1048, 1907
AcuI	CTGAAG	2 cut(s)	295, 516
AcyI	GRCGYC	1 cut(s)	1620
AfaI	GTAC	4 cut(s)	104, 926, 1383, 1739
AfiI	CCNNNNNNNGG	1 cut(s)	602
AjnI	CCWGG	3 cut(s)	601, 953, 1802
Alw21I	GWGCWC	2 cut(s)	333, 1617
Alw26I	GTCTC	2 cut(s)	138, 1481
AlwI	GGATC	3 cut(s)	591, 614, 683
AlwNI	CAGNNNCTG	1 cut(s)	617
Ama87I	CYCGRG	2 cut(s)	38, 1429
AoxI	GGCC	3 cut(s)	70, 272, 1091
ApeKI	GCWGC	3 cut(s)	118, 1149, 1954
ApoI	RAATTY	5 cut(s)	699, 848, 994, 1048, 1907
AseI	ATTAAT	1 cut(s)	720
Asp700I	GAANNNNTTC	1 cut(s)	17
AspLEI	GCGC	1 cut(s)	1671
AspS9I	GGNCC	1 cut(s)	202
AsuC2I	CCSGG	2 cut(s)	39, 40
AsuHPI	GGTGA	2 cut(s)	313, 385
AvaI	CYCGRG	2 cut(s)	38, 1429
AvaII	GGWCC	1 cut(s)	202
BaeGI	GKGCMC	2 cut(s)	39, 1223
BanI	GGYRCC	2 cut(s)	34, 605
BanII	GRGCYC	1 cut(s)	333
Bbv12I	GWGCWC	2 cut(s)	333, 1617
BbvCI	CCTCAGC	1 cut(s)	809
BbvI	GCAGC	2 cut(s)	130, 1136
BccI	CCATC	3 cut(s)	449, 758, 1801
BceAI	ACGGC	2 cut(s)	259, 1633
BcgI	CGANNNNNNTGC	2 cut(s)	1667, 1701
BciT130I	CCWGG	3 cut(s)	603, 955, 1804
BciVI	GTATCC	1 cut(s)	1229
BclI	TGATCA	1 cut(s)	1821
BcnI	CCSGG	2 cut(s)	39, 40
BcoDI	GTCTC	2 cut(s)	138, 1481
BfaI	CTAG	4 cut(s)	141, 642, 1403, 1524
BfmI	CTRYAG	2 cut(s)	679, 1676
BfuI	GTATCC	1 cut(s)	1229
BisI	GCNGC	3 cut(s)	119, 1150, 1955
BlsI	GCNGC	3 cut(s)	120, 1151, 1956
BmcAI	AGTACT	2 cut(s)	1383, 1739
Bme1390I	CCNGG	5 cut(s)	39, 40, 603, 955, 1804
Bme18I	GGWCC	1 cut(s)	202
BmeT110I	CYCGRG	2 cut(s)	38, 1429
BmgT120I	GGNCC	1 cut(s)	202
BmiI	GGNNCC	3 cut(s)	36, 241, 607
BmrFI	CCNGG	5 cut(s)	39, 40, 603, 955, 1804
BmrI	ACTGGG	1 cut(s)	1885
BmsI	GCATC	5 cut(s)	400, 457, 959, 1521, 1656
BmuI	ACTGGG	1 cut(s)	1885
BplI	GAGNNNNNCTC	2 cut(s)	1478, 1510
BpmI	CTGGAG	2 cut(s)	582, 1303
Bpu10I	CCTNAGC	2 cut(s)	545, 809
BpuEI	CTTGAG	5 cut(s)	59, 289, 445, 725, 1561
BpuMI	CCSGG	2 cut(s)	39, 40
BsaBI	GATNNNNATC	1 cut(s)	582
BsaHI	GRCGYC	1 cut(s)	1620
BsaJI	CCNNGG	3 cut(s)	38, 601, 830
BsaXI	ACNNNNNCTCC	2 cut(s)	180, 210
Bsc4I	CCNNNNNNNGG	1 cut(s)	602
Bse1I	ACTGG	3 cut(s)	1170, 1375, 1880
Bse3DI	GCAATG	1 cut(s)	224
Bse8I	GATNNNNATC	1 cut(s)	582
BseBI	CCWGG	3 cut(s)	603, 955, 1804
BseDI	CCNNGG	3 cut(s)	38, 601, 830
BseGI	GGATG	4 cut(s)	415, 950, 1671, 1812
BseJI	GATNNNNATC	1 cut(s)	582
BseLI	CCNNNNNNNGG	1 cut(s)	602
BseMI	GCAATG	1 cut(s)	224
BseMII	CTCAG	7 cut(s)	416, 624, 800, 1079, 1326, 1378, 1509
BseNI	ACTGG	3 cut(s)	1170, 1375, 1880
BseRI	GAGGAG	6 cut(s)	201, 204, 303, 383, 818, 826
BseSI	GKGCMC	2 cut(s)	39, 1223
BseXI	GCAGC	2 cut(s)	130, 1136
BsgI	GTGCAG	1 cut(s)	1744
BshFI	GGCC	3 cut(s)	72, 274, 1093
BshNI	GGYRCC	2 cut(s)	34, 605
BsiHKAI	GWGCWC	2 cut(s)	333, 1617
BsiHKCI	CYCGRG	2 cut(s)	38, 1429
BsiSI	CCGG	1 cut(s)	39
BslFI	GGGAC	2 cut(s)	1874, 1893
BslI	CCNNNNNNNGG	1 cut(s)	602
BsmAI	GTCTC	2 cut(s)	138, 1481
BsmFI	GGGAC	2 cut(s)	1874, 1893
BsmI	GAATGC	1 cut(s)	1683
BsnI	GGCC	3 cut(s)	72, 274, 1093
BsoBI	CYCGRG	2 cut(s)	38, 1429
Bsp1286I	GDGCHC	4 cut(s)	39, 333, 1223, 1617
Bsp143I	GATC	6 cut(s)	583, 619, 688, 985, 1821, 1895
BspACI	CCGC	4 cut(s)	161, 446, 818, 1395
BspANI	GGCC	3 cut(s)	72, 274, 1093
BspCNI	CTCAG	7 cut(s)	417, 623, 801, 1080, 1327, 1377, 1508
BspLI	GGNNCC	3 cut(s)	36, 241, 607
BspMAI	CTGCAG	1 cut(s)	1680
BspPI	GGATC	3 cut(s)	591, 614, 683
BspQI	GCTCTTC	2 cut(s)	321, 774
BspT107I	GGYRCC	2 cut(s)	34, 605
BsrBI	CCGCTC	1 cut(s)	818
BsrDI	GCAATG	1 cut(s)	224
BsrI	ACTGG	3 cut(s)	1170, 1375, 1880
BssECI	CCNNGG	3 cut(s)	38, 601, 830
BssMI	GATC	6 cut(s)	583, 619, 688, 985, 1821, 1895
BssNI	GRCGYC	1 cut(s)	1620
BssT1I	CCWWGG	1 cut(s)	830
Bst2UI	CCWGG	3 cut(s)	603, 955, 1804
Bst4CI	ACNGT	4 cut(s)	884, 1453, 1695, 1774
Bst6I	CTCTTC	2 cut(s)	321, 774
BstACI	GRCGYC	1 cut(s)	1620
BstAPI	GCANNNNNTGC	1 cut(s)	1385
BstC8I	GCNNGC	2 cut(s)	1263, 1267
BstDEI	CTNAG	9 cut(s)	95, 425, 545, 610, 809, 1088, 1335, 1364, 1495
BstF5I	GGATG	4 cut(s)	415, 950, 1671, 1812
BstHHI	GCGC	1 cut(s)	1671
BstKTI	GATC	6 cut(s)	586, 622, 691, 988, 1824, 1898
BstMAI	GTCTC	2 cut(s)	138, 1481
BstMBI	GATC	6 cut(s)	583, 619, 688, 985, 1821, 1895
BstMWI	GCNNNNNNNGC	6 cut(s)	115, 160, 419, 614, 1385, 1675
BstNI	CCWGG	3 cut(s)	603, 955, 1804
BstNSI	RCATGY	3 cut(s)	632, 967, 1265
BstSCI	CCNGG	5 cut(s)	37, 38, 601, 953, 1802
BstSFI	CTRYAG	2 cut(s)	679, 1676
BstSLI	GKGCMC	2 cut(s)	39, 1223
BstV1I	GCAGC	2 cut(s)	130, 1136
BstX2I	RGATCY	1 cut(s)	688
BstYI	RGATCY	1 cut(s)	688
BsuI	GTATCC	1 cut(s)	1229
BsuRI	GGCC	3 cut(s)	72, 274, 1093
BtsCI	GGATG	4 cut(s)	415, 950, 1671, 1812
BtsI	GCAGTG	1 cut(s)	1685
BtsIMutI	CAGTG	3 cut(s)	422, 1368, 1685
Cac8I	GCNNGC	2 cut(s)	1263, 1267
CaiI	CAGNNNCTG	1 cut(s)	617
CfoI	GCGC	1 cut(s)	1671
Cfr13I	GGNCC	1 cut(s)	202
Cfr9I	CCCGGG	1 cut(s)	38
CseI	GACGC	1 cut(s)	1609
Csp6I	GTAC	4 cut(s)	103, 925, 1382, 1738
CviAII	CATG	9 cut(s)	58, 476, 597, 629, 964, 1018, 1258, 1262, 1610
CviQI	GTAC	4 cut(s)	103, 925, 1382, 1738
DdeI	CTNAG	9 cut(s)	95, 425, 545, 610, 809, 1088, 1335, 1364, 1495
DpnI	GATC	6 cut(s)	585, 621, 690, 987, 1823, 1897
DpnII	GATC	6 cut(s)	583, 619, 688, 985, 1821, 1895
DraI	TTTAAA	1 cut(s)	1734
Eam1104I	CTCTTC	2 cut(s)	321, 774
EarI	CTCTTC	2 cut(s)	321, 774
Ecl136II	GAGCTC	1 cut(s)	331
Eco130I	CCWWGG	1 cut(s)	830
Eco24I	GRGCYC	1 cut(s)	333
Eco47I	GGWCC	1 cut(s)	202
Eco53kI	GAGCTC	1 cut(s)	331
Eco57I	CTGAAG	2 cut(s)	295, 516
Eco88I	CYCGRG	2 cut(s)	38, 1429
EcoICRI	GAGCTC	1 cut(s)	331
EcoRII	CCWGG	3 cut(s)	601, 953, 1802
EcoT14I	CCWWGG	1 cut(s)	830
EcoT22I	ATGCAT	1 cut(s)	1263
EcoT38I	GRGCYC	1 cut(s)	333
ErhI	CCWWGG	1 cut(s)	830
FaeI	CATG	9 cut(s)	61, 479, 600, 632, 967, 1021, 1261, 1265, 1613
FalI	AAGNNNNNCTT	2 cut(s)	1344, 1376
FaqI	GGGAC	2 cut(s)	1874, 1893
FatI	CATG	9 cut(s)	57, 475, 596, 628, 963, 1017, 1257, 1261, 1609
FbaI	TGATCA	1 cut(s)	1821
FblI	GTMKAC	4 cut(s)	975, 1623, 1690, 1872
Fnu4HI	GCNGC	3 cut(s)	119, 1150, 1955
FokI	GGATG	4 cut(s)	422, 937, 1678, 1819
FriOI	GRGCYC	1 cut(s)	333
Fsp4HI	GCNGC	3 cut(s)	119, 1150, 1955
FspBI	CTAG	4 cut(s)	141, 642, 1403, 1524
GlaI	GCGC	1 cut(s)	1670
GluI	GCNGC	3 cut(s)	119, 1150, 1955
GsuI	CTGGAG	2 cut(s)	582, 1303
HaeIII	GGCC	3 cut(s)	72, 274, 1093
HapII	CCGG	1 cut(s)	39
HgaI	GACGC	1 cut(s)	1609
HhaI	GCGC	1 cut(s)	1671
Hin1I	GRCGYC	1 cut(s)	1620
Hin1II	CATG	9 cut(s)	61, 479, 600, 632, 967, 1021, 1261, 1265, 1613
Hin6I	GCGC	1 cut(s)	1669
HinP1I	GCGC	1 cut(s)	1669
HincII	GTYRAC	1 cut(s)	1691
HindII	GTYRAC	1 cut(s)	1691
HindIII	AAGCTT	1 cut(s)	860
HinfI	GANTC	7 cut(s)	442, 488, 557, 734, 770, 1427, 1465
HpaII	CCGG	1 cut(s)	39
HphI	GGTGA	2 cut(s)	313, 385
Hpy166II	GTNNAC	7 cut(s)	220, 976, 1439, 1624, 1691, 1873, 1933
Hpy188I	TCNGA	7 cut(s)	280, 314, 985, 1000, 1296, 1461, 1498
Hpy8I	GTNNAC	7 cut(s)	220, 976, 1439, 1624, 1691, 1873, 1933
Hpy99I	CGWCG	2 cut(s)	1692, 1750
HpyAV	CCTTC	6 cut(s)	7, 278, 1048, 1207, 1370, 1932
HpyCH4III	ACNGT	4 cut(s)	884, 1453, 1695, 1774
HpyCH4IV	ACGT	1 cut(s)	1082
HpyF10VI	GCNNNNNNNGC	6 cut(s)	115, 160, 419, 614, 1385, 1675
HpyF3I	CTNAG	9 cut(s)	95, 425, 545, 610, 809, 1088, 1335, 1364, 1495
HpySE526I	ACGT	1 cut(s)	1082
Hsp92I	GRCGYC	1 cut(s)	1620
Hsp92II	CATG	9 cut(s)	61, 479, 600, 632, 967, 1021, 1261, 1265, 1613
HspAI	GCGC	1 cut(s)	1669
Ksp22I	TGATCA	1 cut(s)	1821
Kzo9I	GATC	6 cut(s)	583, 619, 688, 985, 1821, 1895
LguI	GCTCTTC	2 cut(s)	321, 774
LmnI	GCTCC	1 cut(s)	805
Lsp1109I	GCAGC	2 cut(s)	130, 1136
LweI	GCATC	5 cut(s)	400, 457, 959, 1521, 1656
MaeI	CTAG	4 cut(s)	141, 642, 1403, 1524
MaeII	ACGT	1 cut(s)	1082
MaeIII	GTNAC	5 cut(s)	130, 301, 1006, 1083, 1343
MalI	GATC	6 cut(s)	585, 621, 690, 987, 1823, 1897
MbiI	CCGCTC	1 cut(s)	818
MboI	GATC	6 cut(s)	583, 619, 688, 985, 1821, 1895
MboII	GAAGA	9 cut(s)	129, 301, 338, 451, 729, 791, 833, 931, 1712
MfeI	CAATTG	1 cut(s)	1155
MflI	RGATCY	1 cut(s)	688
MhlI	GDGCHC	4 cut(s)	39, 333, 1223, 1617
MluCI	AATT	9 cut(s)	294, 362, 699, 717, 848, 994, 1048, 1155, 1907
MlyI	GAGTC	2 cut(s)	764, 1421
Mph1103I	ATGCAT	1 cut(s)	1263
MroXI	GAANNNNTTC	1 cut(s)	17
MseI	TTAA	5 cut(s)	432, 720, 765, 1181, 1733
MslI	CAYNNNNRTG	3 cut(s)	453, 480, 672
MspI	CCGG	1 cut(s)	39
MspR9I	CCNGG	5 cut(s)	39, 40, 603, 955, 1804
MunI	CAATTG	1 cut(s)	1155
Mva1269I	GAATGC	1 cut(s)	1683
MvaI	CCWGG	3 cut(s)	603, 955, 1804
MwoI	GCNNNNNNNGC	6 cut(s)	115, 160, 419, 614, 1385, 1675
NciI	CCSGG	2 cut(s)	39, 40
NdeII	GATC	6 cut(s)	583, 619, 688, 985, 1821, 1895
NlaIII	CATG	9 cut(s)	61, 479, 600, 632, 967, 1021, 1261, 1265, 1613
NlaIV	GGNNCC	3 cut(s)	36, 241, 607
NmuCI	GTSAC	2 cut(s)	130, 301
NsiI	ATGCAT	1 cut(s)	1263
NspI	RCATGY	3 cut(s)	632, 967, 1265
PaeI	GCATGC	1 cut(s)	1265
PaeR7I	CTCGAG	1 cut(s)	1429
PciSI	GCTCTTC	2 cut(s)	321, 774
PctI	GAATGC	1 cut(s)	1683
PdmI	GAANNNNTTC	1 cut(s)	17
PfeI	GAWTC	5 cut(s)	442, 488, 557, 734, 1465
PflMI	CCANNNNNTGG	1 cut(s)	602
PfoI	TCCNGGA	1 cut(s)	1802
PkrI	GCNGC	3 cut(s)	120, 1151, 1956
PleI	GAGTC	2 cut(s)	764, 1421
PpsI	GAGTC	2 cut(s)	764, 1421
PshBI	ATTAAT	1 cut(s)	720
PsiI	TTATAA	2 cut(s)	66, 255
Psp124BI	GAGCTC	1 cut(s)	333
Psp6I	CCWGG	3 cut(s)	601, 953, 1802
PspGI	CCWGG	3 cut(s)	601, 953, 1802
PspN4I	GGNNCC	3 cut(s)	36, 241, 607
PspPI	GGNCC	1 cut(s)	202
PspXI	VCTCGAGB	1 cut(s)	1429
PsrI	GAACNNNNNNTAC	2 cut(s)	917, 949
PstI	CTGCAG	1 cut(s)	1680
PstNI	CAGNNNCTG	1 cut(s)	617
PsuI	RGATCY	1 cut(s)	688
RsaI	GTAC	4 cut(s)	104, 926, 1383, 1739
RsaNI	GTAC	4 cut(s)	103, 925, 1382, 1738
RseI	CAYNNNNRTG	3 cut(s)	453, 480, 672
SacI	GAGCTC	1 cut(s)	333
SalI	GTCGAC	1 cut(s)	1689
SapI	GCTCTTC	2 cut(s)	321, 774
SaqAI	TTAA	5 cut(s)	432, 720, 765, 1181, 1733
SatI	GCNGC	3 cut(s)	119, 1150, 1955
Sau3AI	GATC	6 cut(s)	583, 619, 688, 985, 1821, 1895
Sau96I	GGNCC	1 cut(s)	202
ScaI	AGTACT	2 cut(s)	1383, 1739
SchI	GAGTC	2 cut(s)	764, 1421
ScrFI	CCNGG	5 cut(s)	39, 40, 603, 955, 1804
SduI	GDGCHC	4 cut(s)	39, 333, 1223, 1617
SfaNI	GCATC	5 cut(s)	400, 457, 959, 1521, 1656
SfcI	CTRYAG	2 cut(s)	679, 1676
Sfr274I	CTCGAG	1 cut(s)	1429
SinI	GGWCC	1 cut(s)	202
SlaI	CTCGAG	1 cut(s)	1429
SmaI	CCCGGG	1 cut(s)	40
SmiMI	CAYNNNNRTG	3 cut(s)	453, 480, 672
SmlI	CTYRAG	6 cut(s)	74, 268, 460, 704, 1429, 1540
SmoI	CTYRAG	6 cut(s)	74, 268, 460, 704, 1429, 1540
SphI	GCATGC	1 cut(s)	1265
Sse9I	AATT	9 cut(s)	294, 362, 699, 717, 848, 994, 1048, 1155, 1907
SsiI	CCGC	4 cut(s)	161, 446, 818, 1395
SspI	AATATT	1 cut(s)	1586
SspMI	CTAG	4 cut(s)	141, 642, 1403, 1524
SstI	GAGCTC	1 cut(s)	333
StyD4I	CCNGG	5 cut(s)	37, 38, 601, 953, 1802
StyI	CCWWGG	1 cut(s)	830
TaaI	ACNGT	4 cut(s)	884, 1453, 1695, 1774
TaiI	ACGT	1 cut(s)	1085
TaqI	TCGA	5 cut(s)	198, 1195, 1430, 1690, 1745
TasI	AATT	9 cut(s)	294, 362, 699, 717, 848, 994, 1048, 1155, 1907
TatI	WGTACW	3 cut(s)	102, 1381, 1737
TfiI	GAWTC	5 cut(s)	442, 488, 557, 734, 1465
Tru1I	TTAA	5 cut(s)	432, 720, 765, 1181, 1733
Tru9I	TTAA	5 cut(s)	432, 720, 765, 1181, 1733
TscAI	CASTG	3 cut(s)	429, 1375, 1685
TseFI	GTSAC	2 cut(s)	130, 301
TseI	GCWGC	3 cut(s)	118, 1149, 1954
Tsp45I	GTSAC	2 cut(s)	130, 301
TspDTI	ATGAA	6 cut(s)	17, 452, 905, 932, 1030, 1862
TspGWI	ACGGA	1 cut(s)	186
TspMI	CCCGGG	1 cut(s)	38
TspRI	CASTG	3 cut(s)	429, 1375, 1685
Van91I	CCANNNNNTGG	1 cut(s)	602
VpaK11BI	GGWCC	1 cut(s)	202
VspI	ATTAAT	1 cut(s)	720
XapI	RAATTY	5 cut(s)	699, 848, 994, 1048, 1907
XbaI	TCTAGA	2 cut(s)	140, 641
XceI	RCATGY	3 cut(s)	632, 967, 1265
XhoI	CTCGAG	1 cut(s)	1429
XmaI	CCCGGG	1 cut(s)	38
XmiI	GTMKAC	4 cut(s)	975, 1623, 1690, 1872
XmnI	GAANNNNTTC	1 cut(s)	17
XspI	CTAG	4 cut(s)	141, 642, 1403, 1524
ZrmI	AGTACT	2 cut(s)	1383, 1739
Zsp2I	ATGCAT	1 cut(s)	1263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.