Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0002528

Physical Location & Seq

Genomic Coordinates Reverse (-)

1398362 .. 1400404

Gene Structure 2043 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG018300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGGCTAGAAAGCACAGTATTGAATTGAGCGATGATATGAGGTATAGAAGTAAAAACAATCCCAGGTCGAACTATCGTCTTGAACGTGGCGATGAAATTAATTCCTCAGATTCTGATAGAGGATACTGTACAAAAAGAAAAGATTTTGATAGAAGGTGTAGAGAAAAGCAACATGCTGGGATATGGGATGAGCATCATAGGAAGGAATCACGAAATAATGAGCGACATAGCAGTTCAAAACCACCTCATGGACGCTCCACATTGCTAGAGGGAAACCGAAACCGAAACCGAAACCTGAATACTGATGTGTCAAGTTTGGGAAAGAGAGATCGAGTTTATGTTCCGCCTTATAAGTTAGCCCGAAAGATGAAAGAGGTCGAAGATAAAAGTAGCATTGAGTATCAGAGGCTGACATGGGATGCCCTAAAAAAAAGCATCAATGGGGTAGTGAACAAGGTCAATGCTGCCAACATAAAGAACATAATCCCTGAGATCTTTTCAGAGAATCTCATTCGCGGTAGGGGCCTCTTCTGCCGATCCATTATGAAGTCACAGATGGCATCTCCGGGATTCACAGACGTATTTGCTTCCTTGGTTGCTGTTGTCAACACCAAGTTTCCTGAGGTCGGCCAGCTTATGTTGAGAAGAATTGTCTTGAAGCTTAAGATAGCATTCAAGCGGAACGACAAGCCACAGCTACTAGCTGCAGTTAAATTCATTGCTCATCTTGTAAACCAACAAGTGGCTCATGAGATTGTAGCATTGGAATTGCTAACCGTACTGCTTGAAAACCCTGCAGATGACAGTGTTGAAGTTGCTGTATGGTTTGTGACAGATTGTGGCTCAATGCTACAAGACCTTTCACCGAGAGGGCTGCGCGTAATCTTTGATCGGTTTTTGGGGATTCTTCATGAAGGAGAAATTGACAAACGAGTTCAGTTTTTGATTGAGGGCTTATTAGCTTTAAGGAAAGCCAAGTTTAATGGTTACCCAGCTGTTCGTCCAGAGTTGGACCTTGTGGAGCAAGAAGACCAGTTCACTCATGAGGTTTCTCTTCAAGATGAGATAGATCCAGAAGATAGCCTTAATCTCTTCAAGCCGGACCCTGATTTCCTTAAGAATGAGAAGCGCTACGAAGAAGTAAAGAAAACAATACTTGGTGATGAGTCTGAAGACGACGATGAGGTCAACGACGATGATGAATCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGCAGCACATGCAAATAAGAGATGAGACGGACACAAATCTCATCAATCTTCGAAGGACGATATATTTGACCATCATGTGTAGTCTAGATTTTGAGGAAGCAGGTCATAAGCTTCTTCAGATTAAGCTCGAACCAGGCCAAGAGATGGAGCTATGCACTATGCTTTTAGAATGTTGCAGTCAGGAGAAAAACTACCGTCCTTTTTACGGTCTCTTGGGACAGCGGCTCTGCATGATCAACAGAATCTACCGGGAAAATTTTGAGAGATGTTTTGTACAGCAGTACTCGATGATCCACCAGTTCGAAACAAACAAGATTCGCAATGTTGCTTCATTTTACGCCCATTTACTCTCAATAGATGCTCTTCCATGGCATTGCATAGCCTATATGCGTCTAACCGAAAAGGACACCACTTCGTCTTCCAGGATTTTTATCAAGATCCTTTTCCAGGAGTTGTCAAAGCAGCTTGGCACTCGTATGCTTAATGAGCGGCTCCATGATCCGGCCATGCGAGAAAGTAATGAGTCTATTTTGCCGAGGGATAATCCGAGGAACTCCCGGTTCGCCATAAATTTCTTCACACAAATAGGGCTTGGTCCTCTCACTGAGAACCTGCGTGAGTTCTATGATCACCTGCCACAGCTTATTAGGCAACAACAAAAAGCAGTGTTGGAGGAAGAATCTGAGAGCTCTGGTTCATCGGATTCGGAATCGGAATCATCAAGCTCTGATGATGAAAGCGAAAGTGATGGGGATGAAAGACGCAAGAATAAACGTAGGAGGAGAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071006 GO:0071012 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

680

Amino Acids

79.37

Weight (kDa)

5.38

Isoelectric Point (pI)

60.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MA3	PF02847	434 - 540	2.6e-27	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80930
fragaria_vesca	FvH4_3g01450 FvH4_3g43230 FvH4_3g43240 FvH4_3g43240
malus_domestica	MD03G1023500.v1.1 MD11G1028600.v1.1
prunus_persica	Prupe.6G022700_v2.0.a1 Prupe.6G022700_v2.0.a1
pyrus_communis	pycom03g02010 pycom11g02210
rosa_chinensis	RchiOBHm_Chr5g0002291 RchiOBHm_Chr5g0077281 RchiOBHm_Chr5g0077291
rosa_laevigata	RLG00000031014 RLG00000036681 RLG00000036682
rosa_multiflora	Rmu_co8446135.1_g000001 Rmu_sc0000433.1_g000042 Rmu_sc0001492.1_g000008 Rmu_sc0005576.1_g000001 Rmu_sc0006137.1_g000009 Rmu_sc0008383.1_g000001 Rmu_sc0013155.1_g000012 Rmu_ssc0000410.1_g000040
rosa_roxburghii	Rroxscaffold_1G00004680 Rroxscaffold_1G00073650
rosa_rugosa	Rorug04G0394900 Rorug05G0453500
rosa_samantha	Rh5AG017700 Rh5AG508400 Rh5AG508500 Rh5BG020300 Rh5BG529600 Rh5CG019100 Rh5CG019400 Rh5CG554100 Rh5DG018300 Rh5DG542200
rosa_wichuraiana	Rw5G046900 Rw5G046910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	351
AarI	CACCTGC	1 cut(s)	1893
AasI	GACNNNNNNGTC	1 cut(s)	1184
Acc36I	ACCTGC	3 cut(s)	1343, 1872, 1893
AccB7I	CCANNNNNTGG	3 cut(s)	248, 742, 1396
AccBSI	CCGCTC	1 cut(s)	1741
AccII	CGCG	2 cut(s)	516, 879
AciI	CCGC	5 cut(s)	344, 516, 679, 1474, 1741
AclWI	GGATC	5 cut(s)	531, 1064, 1537, 1684, 1745
AcoI	YGGCCR	2 cut(s)	628, 1755
AcsI	RAATTY	3 cut(s)	713, 1507, 1822
AcuI	CTGAAG	3 cut(s)	1191, 1227, 1352
AfaI	GTAC	4 cut(s)	130, 780, 1527, 1535
AfeI	AGCGCT	1 cut(s)	1130
AfiI	CCNNNNNNNGG	7 cut(s)	248, 626, 742, 1396, 1457, 1699, 1753
AflII	CTTAAG	2 cut(s)	662, 1115
AgsI	TTSAA	9 cut(s)	23, 83, 237, 658, 676, 788, 812, 1058, 1096
AjnI	CCWGG	4 cut(s)	62, 1384, 1673, 1698
Alw21I	GWGCWC	1 cut(s)	1943
Alw26I	GTCTC	2 cut(s)	1271, 1466
AlwI	GGATC	5 cut(s)	531, 1064, 1537, 1684, 1745
AlwNI	CAGNNNCTG	2 cut(s)	113, 409
Aor51HI	AGCGCT	1 cut(s)	1130
AoxI	GGCC	4 cut(s)	523, 628, 1387, 1755
ApeKI	GCWGC	5 cut(s)	464, 704, 874, 1255, 1714
ApoI	RAATTY	3 cut(s)	713, 1507, 1822
ArsI	GACNNNNNNTTYG	2 cut(s)	1300, 1332
AseI	ATTAAT	1 cut(s)	99
AspLEI	GCGC	2 cut(s)	879, 1131
AspS9I	GGNCC	4 cut(s)	523, 1012, 1102, 1847
AsuC2I	CCSGG	3 cut(s)	567, 1502, 1810
AsuHPI	GGTGA	3 cut(s)	855, 1172, 1874
AsuII	TTCGAA	2 cut(s)	1303, 1554
AvaII	GGWCC	3 cut(s)	1012, 1102, 1847
AxyI	CCTNAGG	1 cut(s)	621
BanII	GRGCYC	1 cut(s)	1943
BbsI	GAAGAC	3 cut(s)	1035, 1179, 1662
Bbv12I	GWGCWC	1 cut(s)	1943
BbvI	GCAGC	5 cut(s)	451, 691, 861, 1267, 1726
BccI	CCATC	4 cut(s)	550, 1331, 1390, 1994
BcgI	CGANNNNNNTGC	2 cut(s)	856, 890
BciT130I	CCWGG	4 cut(s)	64, 1386, 1675, 1700
BciVI	GTATCC	1 cut(s)	116
BclI	TGATCA	2 cut(s)	1485, 1879
BcnI	CCSGG	3 cut(s)	567, 1502, 1810
BcoDI	GTCTC	2 cut(s)	1271, 1466
BfaI	CTAG	4 cut(s)	6, 266, 701, 1337
BfmI	CTRYAG	2 cut(s)	705, 795
BfoI	RGCGCY	1 cut(s)	1132
BfrI	CTTAAG	2 cut(s)	662, 1115
BfuAI	ACCTGC	3 cut(s)	1343, 1872, 1893
BfuI	GTATCC	1 cut(s)	116
BglII	AGATCT	1 cut(s)	492
BisI	GCNGC	7 cut(s)	465, 705, 875, 1256, 1475, 1715, 1742
BlsI	GCNGC	7 cut(s)	466, 706, 876, 1257, 1476, 1716, 1743
BmcAI	AGTACT	1 cut(s)	1535
Bme1390I	CCNGG	7 cut(s)	64, 567, 1386, 1502, 1675, 1700, 1810
Bme18I	GGWCC	3 cut(s)	1012, 1102, 1847
BmgT120I	GGNCC	4 cut(s)	523, 1012, 1102, 1847
BmiI	GGNNCC	3 cut(s)	524, 1104, 1745
BmrFI	CCNGG	7 cut(s)	64, 567, 1386, 1502, 1675, 1700, 1810
BmsI	GCATC	5 cut(s)	202, 409, 444, 569, 1600
BpiI	GAAGAC	3 cut(s)	1035, 1179, 1662
Bpu14I	TTCGAA	2 cut(s)	1303, 1554
BpuMI	CCSGG	3 cut(s)	567, 1502, 1810
BsaBI	GATNNNNATC	2 cut(s)	192, 1682
BsaI	GGTCTC	1 cut(s)	1466
BsaJI	CCNNGG	5 cut(s)	62, 591, 1619, 1787, 1799
Bsc4I	CCNNNNNNNGG	7 cut(s)	248, 626, 742, 1396, 1457, 1699, 1753
Bse1I	ACTGG	2 cut(s)	1033, 1549
Bse21I	CCTNAGG	1 cut(s)	621
Bse3DI	GCAATG	4 cut(s)	260, 717, 1579, 1624
Bse8I	GATNNNNATC	2 cut(s)	192, 1682
BseBI	CCWGG	4 cut(s)	64, 1386, 1675, 1700
BseDI	CCNNGG	5 cut(s)	62, 591, 1619, 1787, 1799
BseGI	GGATG	3 cut(s)	193, 424, 2011
BseJI	GATNNNNATC	2 cut(s)	192, 1682
BseLI	CCNNNNNNNGG	7 cut(s)	248, 626, 742, 1396, 1457, 1699, 1753
BseMI	GCAATG	4 cut(s)	260, 717, 1579, 1624
BseMII	CTCAG	5 cut(s)	120, 480, 612, 1848, 1926
BseNI	ACTGG	2 cut(s)	1033, 1549
BseRI	GAGGAG	4 cut(s)	1256, 1259, 1262, 1265
BseXI	GCAGC	5 cut(s)	451, 691, 861, 1267, 1726
BseYI	CCCAGC	2 cut(s)	176, 991
Bsh1236I	CGCG	2 cut(s)	516, 879
BshFI	GGCC	4 cut(s)	525, 630, 1389, 1757
BsiHKAI	GWGCWC	1 cut(s)	1943
BsiSI	CCGG	5 cut(s)	566, 1100, 1501, 1754, 1810
BslFI	GGGAC	1 cut(s)	1482
BslI	CCNNNNNNNGG	7 cut(s)	248, 626, 742, 1396, 1457, 1699, 1753
BsmAI	GTCTC	2 cut(s)	1271, 1466
BsmBI	CGTCTC	1 cut(s)	1271
BsmFI	GGGAC	1 cut(s)	1482
BsmI	GAATGC	1 cut(s)	671
BsnI	GGCC	4 cut(s)	525, 630, 1389, 1757
Bso31I	GGTCTC	1 cut(s)	1466
Bsp119I	TTCGAA	2 cut(s)	1303, 1554
Bsp1286I	GDGCHC	1 cut(s)	1943
Bsp1407I	TGTACA	2 cut(s)	128, 1525
Bsp19I	CCATGG	1 cut(s)	1619
BspACI	CCGC	5 cut(s)	344, 516, 679, 1474, 1741
BspANI	GGCC	4 cut(s)	525, 630, 1389, 1757
BspCNI	CTCAG	5 cut(s)	119, 481, 613, 1849, 1927
BspFNI	CGCG	2 cut(s)	516, 879
BspHI	TCATGA	3 cut(s)	748, 910, 1042
BspLI	GGNNCC	3 cut(s)	524, 1104, 1745
BspMAI	CTGCAG	2 cut(s)	709, 799
BspMI	ACCTGC	3 cut(s)	1343, 1872, 1893
BspPI	GGATC	5 cut(s)	531, 1064, 1537, 1684, 1745
BspQI	GCTCTTC	1 cut(s)	1620
BspT104I	TTCGAA	2 cut(s)	1303, 1554
BspTI	CTTAAG	2 cut(s)	662, 1115
BspTNI	GGTCTC	1 cut(s)	1466
BsrBI	CCGCTC	1 cut(s)	1741
BsrDI	GCAATG	4 cut(s)	260, 717, 1579, 1624
BsrGI	TGTACA	2 cut(s)	128, 1525
BsrI	ACTGG	2 cut(s)	1033, 1549
BssECI	CCNNGG	5 cut(s)	62, 591, 1619, 1787, 1799
BssT1I	CCWWGG	2 cut(s)	591, 1619
Bst2UI	CCWGG	4 cut(s)	64, 1386, 1675, 1700
Bst4CI	ACNGT	6 cut(s)	17, 128, 778, 806, 1448, 1460
Bst6I	CTCTTC	5 cut(s)	533, 1059, 1097, 1233, 1620
BstAFI	CTTAAG	2 cut(s)	662, 1115
BstAPI	GCANNNNNTGC	1 cut(s)	1261
BstAUI	TGTACA	2 cut(s)	128, 1525
BstBI	TTCGAA	2 cut(s)	1303, 1554
BstC8I	GCNNGC	1 cut(s)	632
BstDEI	CTNAG	5 cut(s)	106, 489, 621, 1857, 1935
BstDSI	CCRYGG	1 cut(s)	1619
BstEII	GGTNACC	1 cut(s)	986
BstENI	CCTNNNNNAGG	1 cut(s)	1697
BstF5I	GGATG	3 cut(s)	193, 424, 2011
BstFNI	CGCG	2 cut(s)	516, 879
BstH2I	RGCGCY	1 cut(s)	1132
BstHHI	GCGC	2 cut(s)	879, 1131
BstMAI	GTCTC	2 cut(s)	1271, 1466
BstMWI	GCNNNNNNNGC	5 cut(s)	522, 531, 1261, 1738, 1900
BstNI	CCWGG	4 cut(s)	64, 1386, 1675, 1700
BstNSI	RCATGY	2 cut(s)	176, 1264
BstPI	GGTNACC	1 cut(s)	986
BstSCI	CCNGG	7 cut(s)	62, 565, 1384, 1500, 1673, 1698, 1808
BstSFI	CTRYAG	2 cut(s)	705, 795
BstUI	CGCG	2 cut(s)	516, 879
BstV1I	GCAGC	5 cut(s)	451, 691, 861, 1267, 1726
BstV2I	GAAGAC	3 cut(s)	1035, 1179, 1662
BstX2I	RGATCY	3 cut(s)	492, 1069, 1689
BstYI	RGATCY	3 cut(s)	492, 1069, 1689
Bsu36I	CCTNAGG	1 cut(s)	621
BsuI	GTATCC	1 cut(s)	116
BsuRI	GGCC	4 cut(s)	525, 630, 1389, 1757
BtgI	CCRYGG	1 cut(s)	1619
BtgZI	GCGATG	2 cut(s)	45, 105
BtsCI	GGATG	3 cut(s)	193, 424, 2011
BtsI	GCAGTG	1 cut(s)	1923
BtsIMutI	CAGTG	3 cut(s)	811, 1854, 1923
BveI	ACCTGC	3 cut(s)	1343, 1872, 1893
Cac8I	GCNNGC	1 cut(s)	632
CaiI	CAGNNNCTG	2 cut(s)	113, 409
CciI	TCATGA	3 cut(s)	748, 910, 1042
CfoI	GCGC	2 cut(s)	879, 1131
Cfr13I	GGNCC	4 cut(s)	523, 1012, 1102, 1847
CseI	GACGC	3 cut(s)	261, 1631, 2022
Csp6I	GTAC	4 cut(s)	129, 779, 1526, 1534
CviQI	GTAC	4 cut(s)	129, 779, 1526, 1534
DdeI	CTNAG	5 cut(s)	106, 489, 621, 1857, 1935
DrdI	GACNNNNNNGTC	1 cut(s)	1184
DseDI	GACNNNNNNGTC	1 cut(s)	1184
EaeI	YGGCCR	2 cut(s)	628, 1755
Eam1104I	CTCTTC	5 cut(s)	533, 1059, 1097, 1233, 1620
EarI	CTCTTC	5 cut(s)	533, 1059, 1097, 1233, 1620
EciI	GGCGGA	1 cut(s)	333
Ecl136II	GAGCTC	1 cut(s)	1941
Eco130I	CCWWGG	2 cut(s)	591, 1619
Eco24I	GRGCYC	1 cut(s)	1943
Eco31I	GGTCTC	1 cut(s)	1466
Eco47I	GGWCC	3 cut(s)	1012, 1102, 1847
Eco47III	AGCGCT	1 cut(s)	1130
Eco53kI	GAGCTC	1 cut(s)	1941
Eco57I	CTGAAG	3 cut(s)	1191, 1227, 1352
Eco81I	CCTNAGG	1 cut(s)	621
Eco91I	GGTNACC	1 cut(s)	986
EcoICRI	GAGCTC	1 cut(s)	1941
EcoNI	CCTNNNNNAGG	1 cut(s)	1697
EcoO109I	RGGNCCY	1 cut(s)	523
EcoO65I	GGTNACC	1 cut(s)	986
EcoRII	CCWGG	4 cut(s)	62, 1384, 1673, 1698
EcoT14I	CCWWGG	2 cut(s)	591, 1619
EcoT38I	GRGCYC	1 cut(s)	1943
ErhI	CCWWGG	2 cut(s)	591, 1619
Esp3I	CGTCTC	1 cut(s)	1271
FalI	AAGNNNNNCTT	2 cut(s)	1068, 1100
FaqI	GGGAC	1 cut(s)	1482
FbaI	TGATCA	2 cut(s)	1485, 1879
Fnu4HI	GCNGC	7 cut(s)	465, 705, 875, 1256, 1475, 1715, 1742
FokI	GGATG	3 cut(s)	200, 431, 2018
FriOI	GRGCYC	1 cut(s)	1943
Fsp4HI	GCNGC	7 cut(s)	465, 705, 875, 1256, 1475, 1715, 1742
FspBI	CTAG	4 cut(s)	6, 266, 701, 1337
GlaI	GCGC	2 cut(s)	878, 1130
GluI	GCNGC	7 cut(s)	465, 705, 875, 1256, 1475, 1715, 1742
GsaI	CCCAGC	2 cut(s)	180, 995
HaeII	RGCGCY	1 cut(s)	1132
HaeIII	GGCC	4 cut(s)	525, 630, 1389, 1757
HapII	CCGG	5 cut(s)	566, 1100, 1501, 1754, 1810
HgaI	GACGC	3 cut(s)	261, 1631, 2022
HhaI	GCGC	2 cut(s)	879, 1131
Hin6I	GCGC	2 cut(s)	877, 1129
HinP1I	GCGC	2 cut(s)	877, 1129
HincII	GTYRAC	2 cut(s)	607, 1189
HindII	GTYRAC	2 cut(s)	607, 1189
HindIII	AAGCTT	2 cut(s)	659, 1361
HpaII	CCGG	5 cut(s)	566, 1100, 1501, 1754, 1810
HphI	GGTGA	3 cut(s)	855, 1172, 1874
Hpy166II	GTNNAC	5 cut(s)	451, 607, 733, 1038, 1189
Hpy8I	GTNNAC	5 cut(s)	451, 607, 733, 1038, 1189
Hpy99I	CGWCG	2 cut(s)	1181, 1196
HpyAV	CCTTC	4 cut(s)	147, 196, 908, 1299
HpyCH4III	ACNGT	6 cut(s)	17, 128, 778, 806, 1448, 1460
HpyCH4IV	ACGT	3 cut(s)	85, 579, 2026
HpyCH4V	TGCA	7 cut(s)	707, 797, 1264, 1407, 1428, 1482, 1629
HpyF10VI	GCNNNNNNNGC	5 cut(s)	522, 531, 1261, 1738, 1900
HpyF3I	CTNAG	5 cut(s)	106, 489, 621, 1857, 1935
HpySE526I	ACGT	3 cut(s)	85, 579, 2026
HspAI	GCGC	2 cut(s)	877, 1129
Ksp22I	TGATCA	2 cut(s)	1485, 1879
LguI	GCTCTTC	1 cut(s)	1620
LmnI	GCTCC	5 cut(s)	260, 1021, 1252, 1399, 1749
Lsp1109I	GCAGC	5 cut(s)	451, 691, 861, 1267, 1726
LweI	GCATC	5 cut(s)	202, 409, 444, 569, 1600
MaeI	CTAG	4 cut(s)	6, 266, 701, 1337
MaeII	ACGT	3 cut(s)	85, 579, 2026
MaeIII	GTNAC	3 cut(s)	549, 829, 986
MbiI	CCGCTC	1 cut(s)	1741
MflI	RGATCY	3 cut(s)	492, 1069, 1689
MhlI	GDGCHC	1 cut(s)	1943
MluCI	AATT	9 cut(s)	23, 96, 100, 648, 713, 767, 921, 1507, 1822
MlyI	GAGTC	2 cut(s)	1175, 1784
MmeI	TCCRAC	2 cut(s)	990, 1902
MslI	CAYNNNNRTG	1 cut(s)	1727
MspA1I	CMGCKG	2 cut(s)	995, 1474
MspCI	CTTAAG	2 cut(s)	662, 1115
MspI	CCGG	5 cut(s)	566, 1100, 1501, 1754, 1810
MspR9I	CCNGG	7 cut(s)	64, 567, 1386, 1502, 1675, 1700, 1810
Mva1269I	GAATGC	1 cut(s)	671
MvaI	CCWGG	4 cut(s)	64, 1386, 1675, 1700
MvnI	CGCG	2 cut(s)	516, 879
MwoI	GCNNNNNNNGC	5 cut(s)	522, 531, 1261, 1738, 1900
NciI	CCSGG	3 cut(s)	567, 1502, 1810
NcoI	CCATGG	1 cut(s)	1619
NlaIV	GGNNCC	3 cut(s)	524, 1104, 1745
NmeAIII	GCCGAG	1 cut(s)	1812
NmuCI	GTSAC	2 cut(s)	549, 829
NspI	RCATGY	2 cut(s)	176, 1264
NspV	TTCGAA	2 cut(s)	1303, 1554
PagI	TCATGA	3 cut(s)	748, 910, 1042
PaqCI	CACCTGC	1 cut(s)	1893
PciSI	GCTCTTC	1 cut(s)	1620
PcsI	WCGNNNNNNNCGW	1 cut(s)	82
PctI	GAATGC	1 cut(s)	671
PflMI	CCANNNNNTGG	3 cut(s)	248, 742, 1396
PfoI	TCCNGGA	3 cut(s)	565, 1673, 1698
PkrI	GCNGC	7 cut(s)	466, 706, 876, 1257, 1476, 1716, 1743
PleI	GAGTC	2 cut(s)	1174, 1783
PpsI	GAGTC	2 cut(s)	1174, 1783
PshBI	ATTAAT	1 cut(s)	99
PsiI	TTATAA	1 cut(s)	351
Psp124BI	GAGCTC	1 cut(s)	1943
Psp6I	CCWGG	4 cut(s)	62, 1384, 1673, 1698
PspEI	GGTNACC	1 cut(s)	986
PspFI	CCCAGC	2 cut(s)	176, 991
PspGI	CCWGG	4 cut(s)	62, 1384, 1673, 1698
PspN4I	GGNNCC	3 cut(s)	524, 1104, 1745
PspPI	GGNCC	4 cut(s)	523, 1012, 1102, 1847
PstI	CTGCAG	2 cut(s)	709, 799
PstNI	CAGNNNCTG	2 cut(s)	113, 409
PsuI	RGATCY	3 cut(s)	492, 1069, 1689
PvuII	CAGCTG	1 cut(s)	995
RsaI	GTAC	4 cut(s)	130, 780, 1527, 1535
RsaNI	GTAC	4 cut(s)	129, 779, 1526, 1534
RseI	CAYNNNNRTG	1 cut(s)	1727
SacI	GAGCTC	1 cut(s)	1943
SapI	GCTCTTC	1 cut(s)	1620
SatI	GCNGC	7 cut(s)	465, 705, 875, 1256, 1475, 1715, 1742
Sau96I	GGNCC	4 cut(s)	523, 1012, 1102, 1847
ScaI	AGTACT	1 cut(s)	1535
SchI	GAGTC	2 cut(s)	1175, 1784
ScrFI	CCNGG	7 cut(s)	64, 567, 1386, 1502, 1675, 1700, 1810
SduI	GDGCHC	1 cut(s)	1943
SfaNI	GCATC	5 cut(s)	202, 409, 444, 569, 1600
SfcI	CTRYAG	2 cut(s)	705, 795
SfuI	TTCGAA	2 cut(s)	1303, 1554
SinI	GGWCC	3 cut(s)	1012, 1102, 1847
SmiMI	CAYNNNNRTG	1 cut(s)	1727
SmlI	CTYRAG	2 cut(s)	662, 1115
SmoI	CTYRAG	2 cut(s)	662, 1115
Sse9I	AATT	9 cut(s)	23, 96, 100, 648, 713, 767, 921, 1507, 1822
SsiI	CCGC	5 cut(s)	344, 516, 679, 1474, 1741
SspMI	CTAG	4 cut(s)	6, 266, 701, 1337
SstI	GAGCTC	1 cut(s)	1943
StyD4I	CCNGG	7 cut(s)	62, 565, 1384, 1500, 1673, 1698, 1808
StyI	CCWWGG	2 cut(s)	591, 1619
TaaI	ACNGT	6 cut(s)	17, 128, 778, 806, 1448, 1460
TaiI	ACGT	3 cut(s)	88, 582, 2029
TaqI	TCGA	7 cut(s)	68, 331, 378, 1303, 1380, 1538, 1554
TasI	AATT	9 cut(s)	23, 96, 100, 648, 713, 767, 921, 1507, 1822
TatI	WGTACW	3 cut(s)	128, 1525, 1533
TauI	GCSGC	2 cut(s)	1477, 1744
TscAI	CASTG	3 cut(s)	811, 1861, 1923
TseFI	GTSAC	2 cut(s)	549, 829
TseI	GCWGC	5 cut(s)	464, 704, 874, 1255, 1714
Tsp45I	GTSAC	2 cut(s)	549, 829
TspGWI	ACGGA	1 cut(s)	1295
TspRI	CASTG	3 cut(s)	811, 1861, 1923
Van91I	CCANNNNNTGG	3 cut(s)	248, 742, 1396
Vha464I	CTTAAG	2 cut(s)	662, 1115
VpaK11BI	GGWCC	3 cut(s)	1012, 1102, 1847
VspI	ATTAAT	1 cut(s)	99
XagI	CCTNNNNNAGG	1 cut(s)	1697
XapI	RAATTY	3 cut(s)	713, 1507, 1822
XbaI	TCTAGA	1 cut(s)	1336
XceI	RCATGY	2 cut(s)	176, 1264
XspI	CTAG	4 cut(s)	6, 266, 701, 1337
ZrmI	AGTACT	1 cut(s)	1535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.