Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002528

Physical Location & Seq

Genomic Coordinates Forward (+)

83165363 .. 83170305

Gene Structure 4943 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ35188

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

ATGGCTAGACGGCACAGTGGTGAATCGAGTGATGATGATGTGAGGGGTGGAAGAGATAAGTACCGTCAGCATAGAAGTAAAAGCGAATCGAGGTCAAACAATCATCTTGAGCAGGGTGAGATTGATTCCTCAGATTCTGATAGAGATAATAGAACAAAGAGACAAGGGAAACGGGATGATGAGAAGGAAAGGGAAAGGTCCAGTGAGAGGGTTCCCAGTGATAGACATGGAAGGTGGCGGGGTGATCGTCAAGATAGGGATCGACACACTTCTGATGAAGACGGTGAGGTGGCAGAGAAAGACAGGGATGGGCAAGAAAGGGAAAGGAAAAATGAAAATGGGAACAGACAACGTGAAAGGGATCCCAGTGATAGATATGGAAGGTGGCGGGGTGATCGTCAAGATAGGGATGTACAAACTTCTGATGAAGATGGTGAGCTGGCCGAGAAAGACAGGGGTGGGCAAGAAAGGGAAAGGAAAAATGAAAATGGGAACAGACAACGTGAAAATGGGAATGGTGATAGGGGGAGAGAAAATAGAAGTTCTGAAGATGATGAGCGACTGAAGAGATACCGACATGAGAGTGGACATAGAAGGCGGGAGGACGAGGATGGTCGTAGAAACAGGGACAGGCATTCACGTCACTACTCTGAGCGCAGGGATGAAAGGGAAGAGCGCAGAACTTCAGAACGGAAAAGGGATAGTAGAGATGATGGTGGGCAAAGTAGGCATAGAAACCGGGATGACGATGGTGAGATAAAGAATCGCAGAAATAAGGAGGTGAATGAAAGACGAGAAGACACTGAGCGAGATGATAGGATGCTTGAGAATTCAAAACCTCAAGGACGGTCAACATTGCAACAGGGAAATCTGAATAATAATGTGGCAAATTTGGGAAAGAGTGGTGGGGTTTATATTCCGCCCTATAAGTTGGCCCGAATGATGAAAGAGGTCGAAGATAAAAGTAGCGTCGAGTATCAACGCTTGACATGGGATGCCCTCCGAAAGAGTATCAATGGGCTTGTGAACAAGGTCAATGCTGCAAACATTAAAAATATAATTCCAGAAATTTTTGCAGAGAATCTCATTCGTGGAAGAGGTCTCTTTTGTCGATCCTGTATGAAGTCACAGATGGCATCTCCAGGATTTACAGATATCTTTGCTGGCTTGGTTGCTGTTGTTAACACCAAGTTTCCTGAGGTTGGTGAACTTCTGCTGAGAAGAATCGTCTTGCAGCTTAAGAGAGCATTTAAGCGGAACGACAAGCCACAACTACTAGCTGCTGTCAAATTTATCGCGCATCTCGTCAACCAGCAAGTGGCTCATGAGATTATAGCATTGGAATTGCTTACTGTGCTGCTGGAGAACCCTACCGATGACAGTGTTGAAGTTGCTGTTGGCTTTGTCACAGAGTGTGGATCGATACTGCAAGACCTTTCACCTAAAGGGCTCCATGGCATCTTTGAGCGCTTTCGTGGAATTCTTCATGAAGGAGAAATTGACAAACGAGTTCAGTTTTTGATCGAAGGCTTATTTGCATTACGAAAAGCAAAATTTCAGGGGCACCCAGCTGTTCGTCCAGAACTGGACCTTGTTGAACAAGAAGACCAGTTAACTCATGAGATTTCTCTTCAAGAGGAGATAAATCCAGAAATTACCCTTGATATTTTCAAGCCTGATCCTGATTTCATTGAGAATGAGAAGCGCTATGAAGATGTGAAGAAAACAATTCTTGGTGAAGACTCTGAAGAGGAAGGTTCTGATGCAGCTTCAGATGGTGAGGATGATGATGATGAGGAGGAGGACGAAGATGATGATGAGGAGGAGGACGAGCAGGAAATGAAAATAAGAGATGAGACTGAGACAAATCTTGTGAATCTTCGAAGGACAATATATCTGACTATCATGTCCAGTGTAGATTTTGAGGAAGCAGGTCATAAGCTCCTTAAGATTAAGCTTGAGCCAGGCCAAGAGATGGAGCTATGTGTCATGCTTTTGGAATGTTGCAGTCAGGAGAGAACCTACCTCCGCTATTATGGTCTCTTGGGACAGCGGTTCTGCATGATCAACAGAATCCACCAGGAAAATTTTGAGAAATGTTTTGTCCAGCAGTATTCAATGATTCACCGGCTTGAAACAAACAAGCTACGTAATGTAGCCAAGTTTTTTGCGCATTTACTGGGAACAGATGCCCTTCCGTGGCATTGCTTAGCCTATATACGGTTAACTGAAGAGGATACCACTTCTTCTTCTCGTATTTTTATCAAGATCCTTTTCCAGGAATTGTCAGAGCATCTTGGTATCCGTCTGCTTAATGAGCGGTTGACTGATCCTGCAATGCAAGACTCTTATGAATCTATTTTCCCAAGGGATAATCCCAAGAACACCCGATTTGCTATTAACTTTTTCACATCCATTGGGCTTGGCGGCATCACTGAGAACCTGCGTGAGTATTTGAAGCACATGCCACGCCTTATTATGCAACAACAAAAAGCAGCGTCAGATGAAGAATCCGACAGTTCTGGTTCATCGGATTCGGACTCAGGGTCAGCTAGTTCTGAGTCAGAATCAGAATCATCAAGCTCTGAAAGTGAAAGTGATCGCGATGAAAGACGCAAGAAGAAACGTAGGAGGAGAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071006 GO:0071012 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

880

Amino Acids

102.58

Weight (kDa)

5.44

Isoelectric Point (pI)

61.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	336 - 517	1.2e-13	MIF4G domain
MA3	PF02847	627 - 733	1e-30	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80930
fragaria_vesca	FvH4_3g01450 FvH4_3g43230 FvH4_3g43240 FvH4_3g43240
malus_domestica	MD03G1023500.v1.1 MD11G1028600.v1.1
prunus_persica	Prupe.6G022700_v2.0.a1 Prupe.6G022700_v2.0.a1
pyrus_communis	pycom03g02010 pycom11g02210
rosa_chinensis	RchiOBHm_Chr5g0002291 RchiOBHm_Chr5g0077281 RchiOBHm_Chr5g0077291
rosa_laevigata	RLG00000031014 RLG00000036681 RLG00000036682
rosa_multiflora	Rmu_co8446135.1_g000001 Rmu_sc0000433.1_g000042 Rmu_sc0001492.1_g000008 Rmu_sc0005576.1_g000001 Rmu_sc0006137.1_g000009 Rmu_sc0008383.1_g000001 Rmu_sc0013155.1_g000012 Rmu_ssc0000410.1_g000040
rosa_roxburghii	Rroxscaffold_1G00004680 Rroxscaffold_1G00073650
rosa_rugosa	Rorug04G0394900 Rorug05G0453500
rosa_samantha	Rh5AG017700 Rh5AG508400 Rh5AG508500 Rh5BG020300 Rh5BG529600 Rh5CG019100 Rh5CG019400 Rh5CG554100 Rh5DG018300 Rh5DG542200
rosa_wichuraiana	Rw5G046900 Rw5G046910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1906
Acc16I	TGCGCA	1 cut(s)	2172
Acc36I	ACCTGC	2 cut(s)	1922, 2451
AccB1I	GGYRCC	1 cut(s)	1563
AccB7I	CCANNNNNTGG	2 cut(s)	1318, 1975
AccBSI	CCGCTC	1 cut(s)	2320
AccII	CGCG	2 cut(s)	1298, 2604
AciI	CCGC	9 cut(s)	238, 388, 598, 920, 1255, 2029, 2053, 2320, 2427
AclWI	GGATC	8 cut(s)	267, 356, 369, 1107, 1426, 1673, 2263, 2324
AcoI	YGGCCR	1 cut(s)	441
AcsI	RAATTY	7 cut(s)	829, 889, 1068, 1289, 1479, 1553, 2086
AcuI	CTGAAG	6 cut(s)	567, 584, 669, 1755, 1767, 2250
AdeI	CACNNNGTG	1 cut(s)	1413
AfaI	GTAC	2 cut(s)	62, 414
AfeI	AGCGCT	2 cut(s)	1469, 1706
AfiI	CCNNNNNNNGG	7 cut(s)	207, 1202, 1318, 1975, 2199, 2220, 2278
AflII	CTTAAG	2 cut(s)	1238, 1946
AgsI	TTSAA	8 cut(s)	834, 1388, 1598, 1634, 1672, 2118, 2135, 2458
AhdI	GACNNNNNGTC	1 cut(s)	2545
AjiI	CACGTC	1 cut(s)	641
AjnI	CCWGG	4 cut(s)	1141, 1963, 2079, 2277
AjuI	GAANNNNNNNTTGG	2 cut(s)	1380, 1412
AleI	CACNNNNGTG	1 cut(s)	18
Alw26I	GTCTC	5 cut(s)	154, 1106, 1850, 1856, 2045
AlwI	GGATC	8 cut(s)	267, 356, 369, 1107, 1426, 1673, 2263, 2324
AlwNI	CAGNNNCTG	1 cut(s)	137
Aor51HI	AGCGCT	2 cut(s)	1469, 1706
AoxI	GGCC	3 cut(s)	441, 933, 1966
ApeKI	GCWGC	6 cut(s)	1040, 1234, 1280, 1357, 1766, 2495
ApoI	RAATTY	7 cut(s)	829, 889, 1068, 1289, 1479, 1553, 2086
AspLEI	GCGC	6 cut(s)	657, 678, 1300, 1470, 1707, 2173
AspS9I	GGNCC	3 cut(s)	198, 934, 1588
AsuC2I	CCSGG	1 cut(s)	740
AsuII	TTCGAA	1 cut(s)	1882
AvaII	GGWCC	2 cut(s)	198, 1588
AxyI	CCTNAGG	1 cut(s)	1197
BaeGI	GKGCMC	1 cut(s)	1566
BamHI	GGATCC	1 cut(s)	361
BanI	GGYRCC	1 cut(s)	1563
BanII	GRGCYC	1 cut(s)	1452
BbsI	GAAGAC	4 cut(s)	285, 804, 1611, 1746
BbvI	GCAGC	6 cut(s)	1027, 1246, 1267, 1344, 1778, 2507
BccI	CCATC	8 cut(s)	302, 425, 605, 707, 743, 1126, 1769, 1969
BceAI	ACGGC	1 cut(s)	26
BciT130I	CCWGG	4 cut(s)	1143, 1965, 2081, 2279
BciVI	GTATCC	2 cut(s)	2230, 2312
BclI	TGATCA	1 cut(s)	2064
BcnI	CCSGG	1 cut(s)	740
BcoDI	GTCTC	5 cut(s)	154, 1106, 1850, 1856, 2045
BfaI	CTAG	3 cut(s)	6, 1277, 2553
BfoI	RGCGCY	2 cut(s)	1471, 1708
BfrI	CTTAAG	2 cut(s)	1238, 1946
BfuAI	ACCTGC	2 cut(s)	1922, 2451
BfuI	GTATCC	2 cut(s)	2230, 2312
BisI	GCNGC	7 cut(s)	1041, 1235, 1281, 1358, 1767, 2428, 2496
BlpI	GCTNAGC	1 cut(s)	2209
BlsI	GCNGC	7 cut(s)	1042, 1236, 1282, 1359, 1768, 2429, 2497
Bme1390I	CCNGG	5 cut(s)	740, 1143, 1965, 2081, 2279
Bme18I	GGWCC	2 cut(s)	198, 1588
BmeRI	GACNNNNNGTC	1 cut(s)	2545
BmgBI	CACGTC	1 cut(s)	641
BmgT120I	GGNCC	3 cut(s)	198, 934, 1588
BmiI	GGNNCC	4 cut(s)	213, 363, 1451, 1565
BmrFI	CCNGG	5 cut(s)	740, 1143, 1965, 2081, 2279
BmrI	ACTGGG	3 cut(s)	210, 360, 2189
BmsI	GCATC	9 cut(s)	810, 985, 1145, 1309, 1467, 1753, 2179, 2302, 2439
BmuI	ACTGGG	3 cut(s)	210, 360, 2189
BpiI	GAAGAC	4 cut(s)	285, 804, 1611, 1746
BpmI	CTGGAG	2 cut(s)	1125, 1382
Bpu1102I	GCTNAGC	1 cut(s)	2209
Bpu14I	TTCGAA	1 cut(s)	1882
BpuEI	CTTGAG	4 cut(s)	128, 825, 845, 1979
BpuMI	CCSGG	1 cut(s)	740
Bsa29I	ATCGAT	1 cut(s)	1421
BsaAI	YACGTR	1 cut(s)	2150
BsaBI	GATNNNNATC	1 cut(s)	258
BsaI	GGTCTC	2 cut(s)	1106, 2045
BsaJI	CCNNGG	3 cut(s)	1453, 2198, 2366
Bsc4I	CCNNNNNNNGG	7 cut(s)	207, 1202, 1318, 1975, 2199, 2220, 2278
Bse118I	RCCGGY	1 cut(s)	2127
Bse1I	ACTGG	7 cut(s)	201, 216, 366, 1590, 1609, 1911, 2184
Bse21I	CCTNAGG	1 cut(s)	1197
Bse3DI	GCAATG	3 cut(s)	854, 2203, 2343
Bse8I	GATNNNNATC	1 cut(s)	258
BseBI	CCWGG	4 cut(s)	1143, 1965, 2081, 2279
BseCI	ATCGAT	1 cut(s)	1421
BseDI	CCNNGG	3 cut(s)	1453, 2198, 2366
BseJI	GATNNNNATC	1 cut(s)	258
BseLI	CCNNNNNNNGG	7 cut(s)	207, 1202, 1318, 1975, 2199, 2220, 2278
BseMI	GCAATG	3 cut(s)	854, 2203, 2343
BseMII	CTCAG	9 cut(s)	144, 642, 795, 1188, 1208, 1851, 2427, 2550, 2556
BseNI	ACTGG	7 cut(s)	201, 216, 366, 1590, 1609, 1911, 2184
BseRI	GAGGAG	5 cut(s)	1652, 1811, 1814, 1835, 1838
BseSI	GKGCMC	1 cut(s)	1566
BseXI	GCAGC	6 cut(s)	1027, 1246, 1267, 1344, 1778, 2507
BseYI	CCCAGC	1 cut(s)	1567
Bsh1236I	CGCG	2 cut(s)	1298, 2604
BshFI	GGCC	3 cut(s)	443, 935, 1968
BshNI	GGYRCC	1 cut(s)	1563
BshVI	ATCGAT	1 cut(s)	1421
BsiSI	CCGG	2 cut(s)	739, 2128
BslFI	GGGAC	2 cut(s)	641, 2061
BslI	CCNNNNNNNGG	7 cut(s)	207, 1202, 1318, 1975, 2199, 2220, 2278
BsmAI	GTCTC	5 cut(s)	154, 1106, 1850, 1856, 2045
BsmFI	GGGAC	2 cut(s)	641, 2061
BsmI	GAATGC	1 cut(s)	634
BsnI	GGCC	3 cut(s)	443, 935, 1968
Bso31I	GGTCTC	2 cut(s)	1106, 2045
Bsp119I	TTCGAA	1 cut(s)	1882
Bsp1286I	GDGCHC	2 cut(s)	1452, 1566
Bsp1407I	TGTACA	1 cut(s)	412
Bsp1720I	GCTNAGC	1 cut(s)	2209
Bsp19I	CCATGG	1 cut(s)	1453
Bsp68I	TCGCGA	1 cut(s)	2604
BspACI	CCGC	9 cut(s)	238, 388, 598, 920, 1255, 2029, 2053, 2320, 2427
BspANI	GGCC	3 cut(s)	443, 935, 1968
BspCNI	CTCAG	9 cut(s)	143, 643, 796, 1189, 1209, 1852, 2428, 2551, 2555
BspDI	ATCGAT	1 cut(s)	1421
BspFNI	CGCG	2 cut(s)	1298, 2604
BspHI	TCATGA	3 cut(s)	1324, 1486, 1618
BspLI	GGNNCC	4 cut(s)	213, 363, 1451, 1565
BspMI	ACCTGC	2 cut(s)	1922, 2451
BspPI	GGATC	8 cut(s)	267, 356, 369, 1107, 1426, 1673, 2263, 2324
BspQI	GCTCTTC	1 cut(s)	666
BspT104I	TTCGAA	1 cut(s)	1882
BspT107I	GGYRCC	1 cut(s)	1563
BspTI	CTTAAG	2 cut(s)	1238, 1946
BspTNI	GGTCTC	2 cut(s)	1106, 2045
BsrBI	CCGCTC	1 cut(s)	2320
BsrDI	GCAATG	3 cut(s)	854, 2203, 2343
BsrFI	RCCGGY	1 cut(s)	2127
BsrGI	TGTACA	1 cut(s)	412
BsrI	ACTGG	7 cut(s)	201, 216, 366, 1590, 1609, 1911, 2184
BssAI	RCCGGY	1 cut(s)	2127
BssECI	CCNNGG	3 cut(s)	1453, 2198, 2366
BssT1I	CCWWGG	2 cut(s)	1453, 2366
Bst2UI	CCWGG	4 cut(s)	1143, 1965, 2081, 2279
Bst4CI	ACNGT	8 cut(s)	17, 65, 284, 849, 1354, 1382, 2223, 2519
Bst6I	CTCTTC	7 cut(s)	46, 560, 666, 1090, 1635, 1743, 2226
BstAFI	CTTAAG	2 cut(s)	1238, 1946
BstAUI	TGTACA	1 cut(s)	412
BstBAI	YACGTR	1 cut(s)	2150
BstBI	TTCGAA	1 cut(s)	1882
BstC8I	GCNNGC	2 cut(s)	441, 1165
BstDSI	CCRYGG	2 cut(s)	1453, 2198
BstENI	CCTNNNNNAGG	1 cut(s)	2276
BstFNI	CGCG	2 cut(s)	1298, 2604
BstH2I	RGCGCY	2 cut(s)	1471, 1708
BstHHI	GCGC	6 cut(s)	657, 678, 1300, 1470, 1707, 2173
BstMAI	GTCTC	5 cut(s)	154, 1106, 1850, 1856, 2045
BstMWI	GCNNNNNNNGC	3 cut(s)	727, 1354, 2317
BstNI	CCWGG	4 cut(s)	1143, 1965, 2081, 2279
BstNSI	RCATGY	1 cut(s)	2467
BstSCI	CCNGG	5 cut(s)	738, 1141, 1963, 2079, 2277
BstSLI	GKGCMC	1 cut(s)	1566
BstSNI	TACGTA	1 cut(s)	2150
BstUI	CGCG	2 cut(s)	1298, 2604
BstV1I	GCAGC	6 cut(s)	1027, 1246, 1267, 1344, 1778, 2507
BstV2I	GAAGAC	4 cut(s)	285, 804, 1611, 1746
BstX2I	RGATCY	2 cut(s)	361, 2268
BstYI	RGATCY	2 cut(s)	361, 2268
Bsu15I	ATCGAT	1 cut(s)	1421
Bsu36I	CCTNAGG	1 cut(s)	1197
BsuI	GTATCC	2 cut(s)	2230, 2312
BsuRI	GGCC	3 cut(s)	443, 935, 1968
BsuTUI	ATCGAT	1 cut(s)	1421
BtgI	CCRYGG	2 cut(s)	1453, 2198
BtgZI	GCGATG	1 cut(s)	2619
BtrI	CACGTC	1 cut(s)	641
BtsIMutI	CAGTG	8 cut(s)	22, 208, 223, 373, 801, 1387, 1918, 2433
BtuMI	TCGCGA	1 cut(s)	2604
BveI	ACCTGC	2 cut(s)	1922, 2451
Cac8I	GCNNGC	2 cut(s)	441, 1165
CaiI	CAGNNNCTG	1 cut(s)	137
CciI	TCATGA	3 cut(s)	1324, 1486, 1618
CfoI	GCGC	6 cut(s)	657, 678, 1300, 1470, 1707, 2173
Cfr10I	RCCGGY	1 cut(s)	2127
Cfr13I	GGNCC	3 cut(s)	198, 934, 1588
ClaI	ATCGAT	1 cut(s)	1421
CseI	GACGC	3 cut(s)	958, 2487, 2622
Csp6I	GTAC	2 cut(s)	61, 413
CviQI	GTAC	2 cut(s)	61, 413
DraIII	CACNNNGTG	1 cut(s)	1413
DrdI	GACNNNNNNGTC	1 cut(s)	1906
DriI	GACNNNNNGTC	1 cut(s)	2545
DseDI	GACNNNNNNGTC	1 cut(s)	1906
EaeI	YGGCCR	1 cut(s)	441
Eam1104I	CTCTTC	7 cut(s)	46, 560, 666, 1090, 1635, 1743, 2226
Eam1105I	GACNNNNNGTC	1 cut(s)	2545
EarI	CTCTTC	7 cut(s)	46, 560, 666, 1090, 1635, 1743, 2226
EciI	GGCGGA	1 cut(s)	909
Eco105I	TACGTA	1 cut(s)	2150
Eco130I	CCWWGG	2 cut(s)	1453, 2366
Eco24I	GRGCYC	1 cut(s)	1452
Eco31I	GGTCTC	2 cut(s)	1106, 2045
Eco32I	GATATC	1 cut(s)	1156
Eco47I	GGWCC	2 cut(s)	198, 1588
Eco47III	AGCGCT	2 cut(s)	1469, 1706
Eco57I	CTGAAG	6 cut(s)	567, 584, 669, 1755, 1767, 2250
Eco81I	CCTNAGG	1 cut(s)	1197
EcoNI	CCTNNNNNAGG	1 cut(s)	2276
EcoRI	GAATTC	2 cut(s)	829, 1479
EcoRII	CCWGG	4 cut(s)	1141, 1963, 2079, 2277
EcoRV	GATATC	1 cut(s)	1156
EcoT14I	CCWWGG	2 cut(s)	1453, 2366
EcoT38I	GRGCYC	1 cut(s)	1452
ErhI	CCWWGG	2 cut(s)	1453, 2366
FaqI	GGGAC	2 cut(s)	641, 2061
FauI	CCCGC	3 cut(s)	231, 381, 591
FbaI	TGATCA	1 cut(s)	2064
Fnu4HI	GCNGC	7 cut(s)	1041, 1235, 1281, 1358, 1767, 2428, 2496
FriOI	GRGCYC	1 cut(s)	1452
Fsp4HI	GCNGC	7 cut(s)	1041, 1235, 1281, 1358, 1767, 2428, 2496
FspBI	CTAG	3 cut(s)	6, 1277, 2553
FspI	TGCGCA	1 cut(s)	2172
GlaI	GCGC	6 cut(s)	656, 677, 1299, 1469, 1706, 2172
GluI	GCNGC	7 cut(s)	1041, 1235, 1281, 1358, 1767, 2428, 2496
GsaI	CCCAGC	1 cut(s)	1571
GsuI	CTGGAG	2 cut(s)	1125, 1382
HaeII	RGCGCY	2 cut(s)	1471, 1708
HaeIII	GGCC	3 cut(s)	443, 935, 1968
HapII	CCGG	2 cut(s)	739, 2128
HgaI	GACGC	3 cut(s)	958, 2487, 2622
HhaI	GCGC	6 cut(s)	657, 678, 1300, 1470, 1707, 2173
Hin6I	GCGC	6 cut(s)	655, 676, 1298, 1468, 1705, 2171
HinP1I	GCGC	6 cut(s)	655, 676, 1298, 1468, 1705, 2171
HincII	GTYRAC	6 cut(s)	852, 1183, 1309, 1614, 2226, 2325
HindII	GTYRAC	6 cut(s)	852, 1183, 1309, 1614, 2226, 2325
HindIII	AAGCTT	1 cut(s)	1955
HpaI	GTTAAC	3 cut(s)	1183, 1614, 2226
HpaII	CCGG	2 cut(s)	739, 2128
Hpy166II	GTNNAC	9 cut(s)	587, 852, 1027, 1183, 1208, 1309, 1614, 2226, 2325
Hpy8I	GTNNAC	9 cut(s)	587, 852, 1027, 1183, 1208, 1309, 1614, 2226, 2325
Hpy99I	CGWCG	1 cut(s)	974
HpyAV	CCTTC	9 cut(s)	178, 225, 375, 588, 1484, 1520, 1748, 1878, 2204
HpyCH4III	ACNGT	8 cut(s)	17, 65, 284, 849, 1354, 1382, 2223, 2519
HpyCH4IV	ACGT	5 cut(s)	352, 502, 640, 2149, 2626
HpyF10VI	GCNNNNNNNGC	3 cut(s)	727, 1354, 2317
HpySE526I	ACGT	5 cut(s)	352, 502, 640, 2149, 2626
HspAI	GCGC	6 cut(s)	655, 676, 1298, 1468, 1705, 2171
Ksp22I	TGATCA	1 cut(s)	2064
KspAI	GTTAAC	3 cut(s)	1183, 1614, 2226
LguI	GCTCTTC	1 cut(s)	666
LmnI	GCTCC	3 cut(s)	1455, 1947, 1978
Lsp1109I	GCAGC	6 cut(s)	1027, 1246, 1267, 1344, 1778, 2507
LweI	GCATC	9 cut(s)	810, 985, 1145, 1309, 1467, 1753, 2179, 2302, 2439
MaeI	CTAG	3 cut(s)	6, 1277, 2553
MaeII	ACGT	5 cut(s)	352, 502, 640, 2149, 2626
MaeIII	GTNAC	3 cut(s)	641, 1125, 1405
MbiI	CCGCTC	1 cut(s)	2320
MflI	RGATCY	2 cut(s)	361, 2268
MhlI	GDGCHC	2 cut(s)	1452, 1566
MlyI	GAGTC	4 cut(s)	1736, 2339, 2534, 2570
MmeI	TCCRAC	1 cut(s)	2538
MslI	CAYNNNNRTG	2 cut(s)	18, 582
MspA1I	CMGCKG	2 cut(s)	1571, 2053
MspCI	CTTAAG	2 cut(s)	1238, 1946
MspI	CCGG	2 cut(s)	739, 2128
MspR9I	CCNGG	5 cut(s)	740, 1143, 1965, 2081, 2279
Mva1269I	GAATGC	1 cut(s)	634
MvaI	CCWGG	4 cut(s)	1143, 1965, 2081, 2279
MvnI	CGCG	2 cut(s)	1298, 2604
MwoI	GCNNNNNNNGC	3 cut(s)	727, 1354, 2317
NciI	CCSGG	1 cut(s)	740
NcoI	CCATGG	1 cut(s)	1453
NlaIV	GGNNCC	4 cut(s)	213, 363, 1451, 1565
NmeAIII	GCCGAG	1 cut(s)	469
NmuCI	GTSAC	3 cut(s)	641, 1125, 1405
NruI	TCGCGA	1 cut(s)	2604
NsbI	TGCGCA	1 cut(s)	2172
NspI	RCATGY	1 cut(s)	2467
NspV	TTCGAA	1 cut(s)	1882
OliI	CACNNNNGTG	1 cut(s)	18
PagI	TCATGA	3 cut(s)	1324, 1486, 1618
PciSI	GCTCTTC	1 cut(s)	666
PcsI	WCGNNNNNNNCGW	1 cut(s)	1302
PctI	GAATGC	1 cut(s)	634
PflMI	CCANNNNNTGG	2 cut(s)	1318, 1975
PfoI	TCCNGGA	2 cut(s)	1141, 2277
PkrI	GCNGC	7 cut(s)	1042, 1236, 1282, 1359, 1768, 2429, 2497
PleI	GAGTC	4 cut(s)	1736, 2339, 2534, 2569
PpsI	GAGTC	4 cut(s)	1736, 2339, 2534, 2569
Ppu21I	YACGTR	1 cut(s)	2150
Psp6I	CCWGG	4 cut(s)	1141, 1963, 2079, 2277
PspFI	CCCAGC	1 cut(s)	1567
PspGI	CCWGG	4 cut(s)	1141, 1963, 2079, 2277
PspN4I	GGNNCC	4 cut(s)	213, 363, 1451, 1565
PspPI	GGNCC	3 cut(s)	198, 934, 1588
PstNI	CAGNNNCTG	1 cut(s)	137
PsuI	RGATCY	2 cut(s)	361, 2268
PvuII	CAGCTG	1 cut(s)	1571
RruI	TCGCGA	1 cut(s)	2604
RsaI	GTAC	2 cut(s)	62, 414
RsaNI	GTAC	2 cut(s)	61, 413
RseI	CAYNNNNRTG	2 cut(s)	18, 582
SapI	GCTCTTC	1 cut(s)	666
SatI	GCNGC	7 cut(s)	1041, 1235, 1281, 1358, 1767, 2428, 2496
Sau96I	GGNCC	3 cut(s)	198, 934, 1588
SchI	GAGTC	4 cut(s)	1736, 2339, 2534, 2570
ScrFI	CCNGG	5 cut(s)	740, 1143, 1965, 2081, 2279
SduI	GDGCHC	2 cut(s)	1452, 1566
SfaNI	GCATC	9 cut(s)	810, 985, 1145, 1309, 1467, 1753, 2179, 2302, 2439
SfuI	TTCGAA	1 cut(s)	1882
SinI	GGWCC	2 cut(s)	198, 1588
SmiMI	CAYNNNNRTG	2 cut(s)	18, 582
SmlI	CTYRAG	6 cut(s)	107, 824, 840, 1238, 1946, 1958
SmoI	CTYRAG	6 cut(s)	107, 824, 840, 1238, 1946, 1958
SnaBI	TACGTA	1 cut(s)	2150
SsiI	CCGC	9 cut(s)	238, 388, 598, 920, 1255, 2029, 2053, 2320, 2427
SspMI	CTAG	3 cut(s)	6, 1277, 2553
StyD4I	CCNGG	5 cut(s)	738, 1141, 1963, 2079, 2277
StyI	CCWWGG	2 cut(s)	1453, 2366
TaaI	ACNGT	8 cut(s)	17, 65, 284, 849, 1354, 1382, 2223, 2519
TaiI	ACGT	5 cut(s)	355, 505, 643, 2152, 2629
TaqI	TCGA	9 cut(s)	26, 89, 262, 954, 972, 1111, 1421, 1524, 1882
TatI	WGTACW	1 cut(s)	412
TauI	GCSGC	1 cut(s)	2430
TscAI	CASTG	8 cut(s)	22, 208, 223, 373, 808, 1387, 1918, 2440
TseFI	GTSAC	3 cut(s)	641, 1125, 1405
TseI	GCWGC	6 cut(s)	1040, 1234, 1280, 1357, 1766, 2495
Tsp45I	GTSAC	3 cut(s)	641, 1125, 1405
TspGWI	ACGGA	3 cut(s)	706, 2187, 2294
TspRI	CASTG	8 cut(s)	22, 208, 223, 373, 808, 1387, 1918, 2440
Van91I	CCANNNNNTGG	2 cut(s)	1318, 1975
Vha464I	CTTAAG	2 cut(s)	1238, 1946
VpaK11BI	GGWCC	2 cut(s)	198, 1588
XagI	CCTNNNNNAGG	1 cut(s)	2276
XapI	RAATTY	7 cut(s)	829, 889, 1068, 1289, 1479, 1553, 2086
XceI	RCATGY	1 cut(s)	2467
XspI	CTAG	3 cut(s)	6, 1277, 2553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.