Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0002528

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG529600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGATGACAAGGATAGGGAACCGACATCGTGAAAGGGATCTCAGTGATAGATATGGAAGGTGGAGGGGTGATCGTCAAGATAGGAATCGACACACTTCTGATGAAAATGGTGAGGTCGCAGAAGAAGACAGGGGTGGGCAAGAAAGGGAAAGGAAAAATGAAAATAGGAACAGACAACGTAAAAATTGGAATGGTAATTGGGGGAGAGAATATAGAAGTTCTAAGGATTATGAGCGACTGAAGAGATACCGATATGGGAGTGGAGATAGAAGGCGGGAGAATGAGGATGGTCATAGAAACAGGGACAGGCATTCACGTCACTACTATGAGCGCAGGGATGAAAGGGAAGAGCGTAGAACTTCAGAACGGAAAAGGGATAGTAGAGATGATGGCAGGCAAAGTAGGCACAGAAACCGGGATGACGATGGTGAGATCAAGTATCGCAGAAATAAGGAGGTGAATGAAAGACGAGAAGACACTGAGCGAGATGATAGGATGCTTGAGAATTCAAAACCTCAAGGACGGTCAACATTGCAAGAGGGAAATCTGAATAATAATGTGGCAAATTTGGGAAAGAGTGGTGGGGTTTATATTCCGCCCTATAAGTTGGCCCGAATGATGAAAGAGGTCGAAGATAAAAGTAGCGTCGAGTATCAACGCTTGACATGGGATGCCCTCCGAAAGAGTATCAATGGGCTTGTGAACAAGGTCAATGCTGCAAACATTAAAAATATAATTCCAGAAATTTTTGCAGAGAATCTCATTCGTGGAAGAGGTCTCTTTTGTCGATCCTGTATGAAGTCACAGATGGCATCTCCAGGATTTACAGATGTCTTTGCTGGCTTGGTTGCTGTTGTTAACACCAAGTTTCCTGAGGTTGGTGAACTTCTGTTGAGAAGAATCGTCTTGCAGCTTAAGAGAGCATTTAAGCGGAACGACAAGCCACAACTACTAGCTGCTGTCAAATTTATCGCGCATCTCGTCAACCAACAAGTGGCTCATGAGATTATAGCATTGGAATTGCTTACTGTGCTGCTGGAGAACCCTACCGATGACAGTGTTGAAGTTGCTGTTGGCTTTGTCACAGAGTGTGGATCGATACTGCAAGACCTTTCACCTAAAGGGCTCCATGGCATCTTTGAGCGCTTTCGTGGAATTCTTCATGAAGGAGAAATTGACAAACGAGTTCAGTTTTTGATTGAAGGCTTATTTGCATTACGAAAAGCAAAATTTCAGGGGCACCCAGCTGTTCGTCCAGAACTGGACCTTGTTGAACAAGAAGACCAGTTAACTCATGAGATTTCTCTTCAAGAGGAGATAAATCCAGAAATTACCCTTGATATTTTCAAGCCTGATCCTGATTTCATTGAGAATGAGAAGCGCTATGAAGATGTGAAGAAAACAATTCTTGGTGAAGACTCTGAAGAGGAAGGTTCTGATGCAGCTTCAGATGGTGAGGACGATGATGATGAGGAGGAGGACGAAGATGATGAGGAGGAGGAGGACGAGCAGGAAATGAAAATAAGAGATGAGACGGAGACAAATCTTGTGAATCTTCGAAGGACAATATATCTGACTATCATGTCCAGTGTAGATTTTGAGGAAGCAGGTCATAAGCTCCTTAAGATTAAGCTTGAGCCAGGCCAAGAGATGGAGCTATGTGTCATGCTTTTGGAATGTTGCAGTCAGGAGAGAACCTACCTCCGCTATTATGGTCTCTTGGGACAGCGGTTCTGCATGATCAACAGAATCCACCAGGAAAATTTTGAGAAATGTTTTGTCCAGCAGTATTCAATGATTCACCGGCTTGAAACAAACAAGCTACGTAATGTAGCCAAGTTTTTTGCGCATTTACTGGGAACAGATGCCCTTCCGTGGCATTGCTTAGCCTATATACGGTTAACTGAAGAGGATACCACTTCTTCTTCTCGTATTTTTATCAAGATCCTTTTCCAGGAATTGTCAGAGCATCTTGGTATCCGTCTGCTTAATGAGCGGTTGACTGATCCTGCAATGCAAGACTCTTACGAATCTATTTTCCCGAGGGATAATCCCAAGAACACCCGATTTGCTATTAACTTTTTCACATCCATTGGGCTTGGCGGCATCACTGAGAACCTGCGTGAGTATTTGAAGCACATGCCACGCCTTATTATGCAACAACAAAAAGCAGCGTCAGATGAAGAATCCGACAGTTCTGGTTCATCGGATTCGGACTCAGGGTCGGCTAGTTCTGAGTCAGAATCAGAATCATCAAGCTCTGAAAGTGAAAGTGATCGCGATGAAAGACGCAAGAAGAAACGTAGGAGGAGAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071006 GO:0071012 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

772

Amino Acids

90.33

Weight (kDa)

5.6

Isoelectric Point (pI)

59.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	228 - 409	9.9e-14	MIF4G domain
MA3	PF02847	519 - 625	8.4e-31	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80930
fragaria_vesca	FvH4_3g01450 FvH4_3g43230 FvH4_3g43240 FvH4_3g43240
malus_domestica	MD03G1023500.v1.1 MD11G1028600.v1.1
prunus_persica	Prupe.6G022700_v2.0.a1 Prupe.6G022700_v2.0.a1
pyrus_communis	pycom03g02010 pycom11g02210
rosa_chinensis	RchiOBHm_Chr5g0002291 RchiOBHm_Chr5g0077281 RchiOBHm_Chr5g0077291
rosa_laevigata	RLG00000031014 RLG00000036681 RLG00000036682
rosa_multiflora	Rmu_co8446135.1_g000001 Rmu_sc0000433.1_g000042 Rmu_sc0001492.1_g000008 Rmu_sc0005576.1_g000001 Rmu_sc0006137.1_g000009 Rmu_sc0008383.1_g000001 Rmu_sc0013155.1_g000012 Rmu_ssc0000410.1_g000040
rosa_roxburghii	Rroxscaffold_1G00004680 Rroxscaffold_1G00073650
rosa_rugosa	Rorug04G0394900 Rorug05G0453500
rosa_samantha	Rh5AG017700 Rh5AG508400 Rh5AG508500 Rh5BG020300 Rh5BG529600 Rh5CG019100 Rh5CG019400 Rh5CG554100 Rh5DG018300 Rh5DG542200
rosa_wichuraiana	Rw5G046900 Rw5G046910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1582
Acc16I	TGCGCA	1 cut(s)	1848
Acc36I	ACCTGC	2 cut(s)	1598, 2127
AccB1I	GGYRCC	1 cut(s)	1239
AccB7I	CCANNNNNTGG	2 cut(s)	994, 1651
AccBSI	CCGCTC	1 cut(s)	1996
AccII	CGCG	2 cut(s)	974, 2280
AciI	CCGC	7 cut(s)	274, 596, 931, 1705, 1729, 1996, 2103
AclWI	GGATC	6 cut(s)	45, 783, 1102, 1349, 1939, 2000
AcsI	RAATTY	7 cut(s)	505, 565, 744, 965, 1155, 1229, 1762
AcuI	CTGAAG	5 cut(s)	260, 345, 1431, 1443, 1926
AdeI	CACNNNGTG	1 cut(s)	1089
AfeI	AGCGCT	2 cut(s)	1145, 1382
AfiI	CCNNNNNNNGG	6 cut(s)	878, 994, 1651, 1875, 1896, 1954
AflII	CTTAAG	2 cut(s)	914, 1622
AgsI	TTSAA	9 cut(s)	510, 1064, 1202, 1274, 1310, 1348, 1794, 1811, 2134
AhdI	GACNNNNNGTC	1 cut(s)	2221
AjiI	CACGTC	1 cut(s)	317
AjnI	CCWGG	4 cut(s)	817, 1639, 1755, 1953
AjuI	GAANNNNNNNTTGG	2 cut(s)	1056, 1088
AluBI	AGCT	9 cut(s)	913, 956, 1247, 1445, 1618, 1633, 1657, 1822, 2259
AluI	AGCT	9 cut(s)	913, 956, 1247, 1445, 1618, 1633, 1657, 1822, 2259
Alw26I	GTCTC	4 cut(s)	782, 1526, 1532, 1721
AlwI	GGATC	6 cut(s)	45, 783, 1102, 1349, 1939, 2000
Ama87I	CYCGRG	1 cut(s)	2041
Aor51HI	AGCGCT	2 cut(s)	1145, 1382
AoxI	GGCC	2 cut(s)	609, 1642
ApeKI	GCWGC	6 cut(s)	716, 910, 956, 1033, 1442, 2171
ApoI	RAATTY	7 cut(s)	505, 565, 744, 965, 1155, 1229, 1762
AspLEI	GCGC	5 cut(s)	333, 976, 1146, 1383, 1849
AspS9I	GGNCC	2 cut(s)	610, 1264
AsuC2I	CCSGG	1 cut(s)	416
AsuHPI	GGTGA	9 cut(s)	80, 122, 440, 469, 893, 1107, 1424, 1466, 1793
AsuII	TTCGAA	1 cut(s)	1558
AvaI	CYCGRG	1 cut(s)	2041
AvaII	GGWCC	1 cut(s)	1264
AxyI	CCTNAGG	1 cut(s)	873
BaeGI	GKGCMC	1 cut(s)	1242
BanI	GGYRCC	1 cut(s)	1239
BanII	GRGCYC	1 cut(s)	1128
BbsI	GAAGAC	4 cut(s)	132, 480, 1287, 1422
BbvI	GCAGC	6 cut(s)	703, 922, 943, 1020, 1454, 2183
BccI	CCATC	6 cut(s)	281, 383, 419, 802, 1445, 1645
BciT130I	CCWGG	4 cut(s)	819, 1641, 1757, 1955
BciVI	GTATCC	2 cut(s)	1906, 1988
BclI	TGATCA	1 cut(s)	1740
BcnI	CCSGG	1 cut(s)	416
BcoDI	GTCTC	4 cut(s)	782, 1526, 1532, 1721
BfaI	CTAG	2 cut(s)	953, 2229
BfoI	RGCGCY	2 cut(s)	1147, 1384
BfrI	CTTAAG	2 cut(s)	914, 1622
BfuAI	ACCTGC	2 cut(s)	1598, 2127
BfuI	GTATCC	2 cut(s)	1906, 1988
BisI	GCNGC	7 cut(s)	717, 911, 957, 1034, 1443, 2104, 2172
BlpI	GCTNAGC	1 cut(s)	1885
BlsI	GCNGC	7 cut(s)	718, 912, 958, 1035, 1444, 2105, 2173
Bme1390I	CCNGG	5 cut(s)	416, 819, 1641, 1757, 1955
Bme18I	GGWCC	1 cut(s)	1264
BmeRI	GACNNNNNGTC	1 cut(s)	2221
BmeT110I	CYCGRG	1 cut(s)	2041
BmgBI	CACGTC	1 cut(s)	317
BmgT120I	GGNCC	2 cut(s)	610, 1264
BmiI	GGNNCC	3 cut(s)	20, 1127, 1241
BmrFI	CCNGG	5 cut(s)	416, 819, 1641, 1757, 1955
BmrI	ACTGGG	1 cut(s)	1865
BmsI	GCATC	9 cut(s)	486, 661, 821, 985, 1143, 1429, 1855, 1978, 2115
BmuI	ACTGGG	1 cut(s)	1865
BpiI	GAAGAC	4 cut(s)	132, 480, 1287, 1422
BpmI	CTGGAG	2 cut(s)	801, 1058
Bpu1102I	GCTNAGC	1 cut(s)	1885
Bpu14I	TTCGAA	1 cut(s)	1558
BpuEI	CTTGAG	3 cut(s)	501, 521, 1655
BpuMI	CCSGG	1 cut(s)	416
Bsa29I	ATCGAT	1 cut(s)	1097
BsaAI	YACGTR	1 cut(s)	1826
BsaBI	GATNNNNATC	1 cut(s)	84
BsaI	GGTCTC	2 cut(s)	782, 1721
BsaJI	CCNNGG	3 cut(s)	1129, 1874, 2042
Bsc4I	CCNNNNNNNGG	6 cut(s)	878, 994, 1651, 1875, 1896, 1954
Bse118I	RCCGGY	1 cut(s)	1803
Bse1I	ACTGG	4 cut(s)	1266, 1285, 1587, 1860
Bse21I	CCTNAGG	1 cut(s)	873
Bse3DI	GCAATG	3 cut(s)	530, 1879, 2019
Bse8I	GATNNNNATC	1 cut(s)	84
BseBI	CCWGG	4 cut(s)	819, 1641, 1757, 1955
BseCI	ATCGAT	1 cut(s)	1097
BseDI	CCNNGG	3 cut(s)	1129, 1874, 2042
BseGI	GGATG	6 cut(s)	292, 343, 424, 501, 676, 2087
BseJI	GATNNNNATC	1 cut(s)	84
BseLI	CCNNNNNNNGG	6 cut(s)	878, 994, 1651, 1875, 1896, 1954
BseMI	GCAATG	3 cut(s)	530, 1879, 2019
BseMII	CTCAG	6 cut(s)	55, 471, 864, 2103, 2226, 2232
BseNI	ACTGG	4 cut(s)	1266, 1285, 1587, 1860
BseRI	GAGGAG	6 cut(s)	1328, 1487, 1490, 1508, 1511, 1514
BseSI	GKGCMC	1 cut(s)	1242
BseXI	GCAGC	6 cut(s)	703, 922, 943, 1020, 1454, 2183
BseYI	CCCAGC	1 cut(s)	1243
Bsh1236I	CGCG	2 cut(s)	974, 2280
BshFI	GGCC	2 cut(s)	611, 1644
BshNI	GGYRCC	1 cut(s)	1239
BshVI	ATCGAT	1 cut(s)	1097
BsiHKCI	CYCGRG	1 cut(s)	2041
BsiSI	CCGG	2 cut(s)	415, 1804
BslFI	GGGAC	2 cut(s)	317, 1737
BslI	CCNNNNNNNGG	6 cut(s)	878, 994, 1651, 1875, 1896, 1954
BsmAI	GTCTC	4 cut(s)	782, 1526, 1532, 1721
BsmBI	CGTCTC	1 cut(s)	1526
BsmFI	GGGAC	2 cut(s)	317, 1737
BsmI	GAATGC	1 cut(s)	310
BsnI	GGCC	2 cut(s)	611, 1644
Bso31I	GGTCTC	2 cut(s)	782, 1721
BsoBI	CYCGRG	1 cut(s)	2041
Bsp119I	TTCGAA	1 cut(s)	1558
Bsp1286I	GDGCHC	2 cut(s)	1128, 1242
Bsp1720I	GCTNAGC	1 cut(s)	1885
Bsp19I	CCATGG	1 cut(s)	1129
Bsp68I	TCGCGA	1 cut(s)	2280
BspACI	CCGC	7 cut(s)	274, 596, 931, 1705, 1729, 1996, 2103
BspANI	GGCC	2 cut(s)	611, 1644
BspCNI	CTCAG	6 cut(s)	54, 472, 865, 2104, 2227, 2231
BspDI	ATCGAT	1 cut(s)	1097
BspFNI	CGCG	2 cut(s)	974, 2280
BspHI	TCATGA	3 cut(s)	1000, 1162, 1294
BspLI	GGNNCC	3 cut(s)	20, 1127, 1241
BspMI	ACCTGC	2 cut(s)	1598, 2127
BspPI	GGATC	6 cut(s)	45, 783, 1102, 1349, 1939, 2000
BspQI	GCTCTTC	1 cut(s)	342
BspT104I	TTCGAA	1 cut(s)	1558
BspT107I	GGYRCC	1 cut(s)	1239
BspTI	CTTAAG	2 cut(s)	914, 1622
BspTNI	GGTCTC	2 cut(s)	782, 1721
BsrBI	CCGCTC	1 cut(s)	1996
BsrDI	GCAATG	3 cut(s)	530, 1879, 2019
BsrFI	RCCGGY	1 cut(s)	1803
BsrI	ACTGG	4 cut(s)	1266, 1285, 1587, 1860
BssAI	RCCGGY	1 cut(s)	1803
BssECI	CCNNGG	3 cut(s)	1129, 1874, 2042
BssT1I	CCWWGG	1 cut(s)	1129
Bst2UI	CCWGG	4 cut(s)	819, 1641, 1757, 1955
Bst4CI	ACNGT	5 cut(s)	525, 1030, 1058, 1899, 2195
Bst6I	CTCTTC	6 cut(s)	236, 342, 766, 1311, 1419, 1902
BstAFI	CTTAAG	2 cut(s)	914, 1622
BstBAI	YACGTR	1 cut(s)	1826
BstBI	TTCGAA	1 cut(s)	1558
BstC8I	GCNNGC	2 cut(s)	395, 841
BstDEI	CTNAG	8 cut(s)	41, 222, 480, 873, 1885, 2112, 2218, 2235
BstDSI	CCRYGG	2 cut(s)	1129, 1874
BstENI	CCTNNNNNAGG	1 cut(s)	1952
BstF5I	GGATG	6 cut(s)	292, 343, 424, 501, 676, 2087
BstFNI	CGCG	2 cut(s)	974, 2280
BstH2I	RGCGCY	2 cut(s)	1147, 1384
BstHHI	GCGC	5 cut(s)	333, 976, 1146, 1383, 1849
BstMAI	GTCTC	4 cut(s)	782, 1526, 1532, 1721
BstMWI	GCNNNNNNNGC	3 cut(s)	403, 1030, 1993
BstNI	CCWGG	4 cut(s)	819, 1641, 1757, 1955
BstNSI	RCATGY	1 cut(s)	2143
BstSCI	CCNGG	5 cut(s)	414, 817, 1639, 1755, 1953
BstSLI	GKGCMC	1 cut(s)	1242
BstSNI	TACGTA	1 cut(s)	1826
BstUI	CGCG	2 cut(s)	974, 2280
BstV1I	GCAGC	6 cut(s)	703, 922, 943, 1020, 1454, 2183
BstV2I	GAAGAC	4 cut(s)	132, 480, 1287, 1422
BstX2I	RGATCY	2 cut(s)	37, 1944
BstYI	RGATCY	2 cut(s)	37, 1944
Bsu15I	ATCGAT	1 cut(s)	1097
Bsu36I	CCTNAGG	1 cut(s)	873
BsuI	GTATCC	2 cut(s)	1906, 1988
BsuRI	GGCC	2 cut(s)	611, 1644
BsuTUI	ATCGAT	1 cut(s)	1097
BtgI	CCRYGG	2 cut(s)	1129, 1874
BtgZI	GCGATG	1 cut(s)	2295
BtrI	CACGTC	1 cut(s)	317
BtsCI	GGATG	6 cut(s)	292, 343, 424, 501, 676, 2087
BtsIMutI	CAGTG	5 cut(s)	49, 477, 1063, 1594, 2109
BtuMI	TCGCGA	1 cut(s)	2280
BveI	ACCTGC	2 cut(s)	1598, 2127
Cac8I	GCNNGC	2 cut(s)	395, 841
CciI	TCATGA	3 cut(s)	1000, 1162, 1294
CfoI	GCGC	5 cut(s)	333, 976, 1146, 1383, 1849
Cfr10I	RCCGGY	1 cut(s)	1803
Cfr13I	GGNCC	2 cut(s)	610, 1264
ClaI	ATCGAT	1 cut(s)	1097
CseI	GACGC	3 cut(s)	634, 2163, 2298
CviAII	CATG	9 cut(s)	666, 1001, 1130, 1163, 1295, 1582, 1666, 1738, 2140
DdeI	CTNAG	8 cut(s)	41, 222, 480, 873, 1885, 2112, 2218, 2235
DraIII	CACNNNGTG	1 cut(s)	1089
DrdI	GACNNNNNNGTC	1 cut(s)	1582
DriI	GACNNNNNGTC	1 cut(s)	2221
DseDI	GACNNNNNNGTC	1 cut(s)	1582
Eam1104I	CTCTTC	6 cut(s)	236, 342, 766, 1311, 1419, 1902
Eam1105I	GACNNNNNGTC	1 cut(s)	2221
EarI	CTCTTC	6 cut(s)	236, 342, 766, 1311, 1419, 1902
EciI	GGCGGA	1 cut(s)	585
Eco105I	TACGTA	1 cut(s)	1826
Eco130I	CCWWGG	1 cut(s)	1129
Eco24I	GRGCYC	1 cut(s)	1128
Eco31I	GGTCTC	2 cut(s)	782, 1721
Eco47I	GGWCC	1 cut(s)	1264
Eco47III	AGCGCT	2 cut(s)	1145, 1382
Eco57I	CTGAAG	5 cut(s)	260, 345, 1431, 1443, 1926
Eco81I	CCTNAGG	1 cut(s)	873
Eco88I	CYCGRG	1 cut(s)	2041
EcoNI	CCTNNNNNAGG	1 cut(s)	1952
EcoRI	GAATTC	2 cut(s)	505, 1155
EcoRII	CCWGG	4 cut(s)	817, 1639, 1755, 1953
EcoT14I	CCWWGG	1 cut(s)	1129
EcoT38I	GRGCYC	1 cut(s)	1128
ErhI	CCWWGG	1 cut(s)	1129
Esp3I	CGTCTC	1 cut(s)	1526
FaeI	CATG	9 cut(s)	669, 1004, 1133, 1166, 1298, 1585, 1669, 1741, 2143
FaqI	GGGAC	2 cut(s)	317, 1737
FatI	CATG	9 cut(s)	665, 1000, 1129, 1162, 1294, 1581, 1665, 1737, 2139
FauI	CCCGC	1 cut(s)	267
FbaI	TGATCA	1 cut(s)	1740
Fnu4HI	GCNGC	7 cut(s)	717, 911, 957, 1034, 1443, 2104, 2172
FokI	GGATG	6 cut(s)	299, 350, 431, 508, 683, 2074
FriOI	GRGCYC	1 cut(s)	1128
Fsp4HI	GCNGC	7 cut(s)	717, 911, 957, 1034, 1443, 2104, 2172
FspBI	CTAG	2 cut(s)	953, 2229
FspI	TGCGCA	1 cut(s)	1848
GlaI	GCGC	5 cut(s)	332, 975, 1145, 1382, 1848
GluI	GCNGC	7 cut(s)	717, 911, 957, 1034, 1443, 2104, 2172
GsaI	CCCAGC	1 cut(s)	1247
GsuI	CTGGAG	2 cut(s)	801, 1058
HaeII	RGCGCY	2 cut(s)	1147, 1384
HaeIII	GGCC	2 cut(s)	611, 1644
HapII	CCGG	2 cut(s)	415, 1804
HgaI	GACGC	3 cut(s)	634, 2163, 2298
HhaI	GCGC	5 cut(s)	333, 976, 1146, 1383, 1849
Hin1II	CATG	9 cut(s)	669, 1004, 1133, 1166, 1298, 1585, 1669, 1741, 2143
Hin6I	GCGC	5 cut(s)	331, 974, 1144, 1381, 1847
HinP1I	GCGC	5 cut(s)	331, 974, 1144, 1381, 1847
HincII	GTYRAC	6 cut(s)	528, 859, 985, 1290, 1902, 2001
HindII	GTYRAC	6 cut(s)	528, 859, 985, 1290, 1902, 2001
HindIII	AAGCTT	1 cut(s)	1631
HpaI	GTTAAC	3 cut(s)	859, 1290, 1902
HpaII	CCGG	2 cut(s)	415, 1804
HphI	GGTGA	9 cut(s)	80, 122, 440, 469, 893, 1107, 1424, 1466, 1793
Hpy166II	GTNNAC	8 cut(s)	528, 703, 859, 884, 985, 1290, 1902, 2001
Hpy8I	GTNNAC	8 cut(s)	528, 703, 859, 884, 985, 1290, 1902, 2001
Hpy99I	CGWCG	1 cut(s)	650
HpyAV	CCTTC	7 cut(s)	51, 264, 1160, 1196, 1424, 1554, 1880
HpyCH4III	ACNGT	5 cut(s)	525, 1030, 1058, 1899, 2195
HpyCH4IV	ACGT	4 cut(s)	178, 316, 1825, 2302
HpyF10VI	GCNNNNNNNGC	3 cut(s)	403, 1030, 1993
HpyF3I	CTNAG	8 cut(s)	41, 222, 480, 873, 1885, 2112, 2218, 2235
HpySE526I	ACGT	4 cut(s)	178, 316, 1825, 2302
Hsp92II	CATG	9 cut(s)	669, 1004, 1133, 1166, 1298, 1585, 1669, 1741, 2143
HspAI	GCGC	5 cut(s)	331, 974, 1144, 1381, 1847
Ksp22I	TGATCA	1 cut(s)	1740
KspAI	GTTAAC	3 cut(s)	859, 1290, 1902
LguI	GCTCTTC	1 cut(s)	342
LmnI	GCTCC	3 cut(s)	1131, 1623, 1654
Lsp1109I	GCAGC	6 cut(s)	703, 922, 943, 1020, 1454, 2183
LweI	GCATC	9 cut(s)	486, 661, 821, 985, 1143, 1429, 1855, 1978, 2115
MaeI	CTAG	2 cut(s)	953, 2229
MaeII	ACGT	4 cut(s)	178, 316, 1825, 2302
MaeIII	GTNAC	3 cut(s)	317, 801, 1081
MbiI	CCGCTC	1 cut(s)	1996
MflI	RGATCY	2 cut(s)	37, 1944
MhlI	GDGCHC	2 cut(s)	1128, 1242
MlyI	GAGTC	4 cut(s)	1412, 2015, 2210, 2246
MmeI	TCCRAC	1 cut(s)	2214
MslI	CAYNNNNRTG	1 cut(s)	324
MspA1I	CMGCKG	2 cut(s)	1247, 1729
MspCI	CTTAAG	2 cut(s)	914, 1622
MspI	CCGG	2 cut(s)	415, 1804
MspR9I	CCNGG	5 cut(s)	416, 819, 1641, 1757, 1955
Mva1269I	GAATGC	1 cut(s)	310
MvaI	CCWGG	4 cut(s)	819, 1641, 1757, 1955
MvnI	CGCG	2 cut(s)	974, 2280
MwoI	GCNNNNNNNGC	3 cut(s)	403, 1030, 1993
NciI	CCSGG	1 cut(s)	416
NcoI	CCATGG	1 cut(s)	1129
NlaIII	CATG	9 cut(s)	669, 1004, 1133, 1166, 1298, 1585, 1669, 1741, 2143
NlaIV	GGNNCC	3 cut(s)	20, 1127, 1241
NmuCI	GTSAC	3 cut(s)	317, 801, 1081
NruI	TCGCGA	1 cut(s)	2280
NsbI	TGCGCA	1 cut(s)	1848
NspI	RCATGY	1 cut(s)	2143
NspV	TTCGAA	1 cut(s)	1558
PagI	TCATGA	3 cut(s)	1000, 1162, 1294
PciSI	GCTCTTC	1 cut(s)	342
PcsI	WCGNNNNNNNCGW	1 cut(s)	978
PctI	GAATGC	1 cut(s)	310
PflMI	CCANNNNNTGG	2 cut(s)	994, 1651
PfoI	TCCNGGA	2 cut(s)	817, 1953
PkrI	GCNGC	7 cut(s)	718, 912, 958, 1035, 1444, 2105, 2173
PleI	GAGTC	4 cut(s)	1412, 2015, 2210, 2245
PpsI	GAGTC	4 cut(s)	1412, 2015, 2210, 2245
Ppu21I	YACGTR	1 cut(s)	1826
Psp6I	CCWGG	4 cut(s)	817, 1639, 1755, 1953
PspFI	CCCAGC	1 cut(s)	1243
PspGI	CCWGG	4 cut(s)	817, 1639, 1755, 1953
PspN4I	GGNNCC	3 cut(s)	20, 1127, 1241
PspPI	GGNCC	2 cut(s)	610, 1264
PsuI	RGATCY	2 cut(s)	37, 1944
PvuII	CAGCTG	1 cut(s)	1247
RruI	TCGCGA	1 cut(s)	2280
RseI	CAYNNNNRTG	1 cut(s)	324
SapI	GCTCTTC	1 cut(s)	342
SatI	GCNGC	7 cut(s)	717, 911, 957, 1034, 1443, 2104, 2172
Sau96I	GGNCC	2 cut(s)	610, 1264
SchI	GAGTC	4 cut(s)	1412, 2015, 2210, 2246
ScrFI	CCNGG	5 cut(s)	416, 819, 1641, 1757, 1955
SduI	GDGCHC	2 cut(s)	1128, 1242
SfaNI	GCATC	9 cut(s)	486, 661, 821, 985, 1143, 1429, 1855, 1978, 2115
SfuI	TTCGAA	1 cut(s)	1558
SinI	GGWCC	1 cut(s)	1264
SmiMI	CAYNNNNRTG	1 cut(s)	324
SmlI	CTYRAG	5 cut(s)	500, 516, 914, 1622, 1634
SmoI	CTYRAG	5 cut(s)	500, 516, 914, 1622, 1634
SnaBI	TACGTA	1 cut(s)	1826
SsiI	CCGC	7 cut(s)	274, 596, 931, 1705, 1729, 1996, 2103
SspMI	CTAG	2 cut(s)	953, 2229
StyD4I	CCNGG	5 cut(s)	414, 817, 1639, 1755, 1953
StyI	CCWWGG	1 cut(s)	1129
TaaI	ACNGT	5 cut(s)	525, 1030, 1058, 1899, 2195
TaiI	ACGT	4 cut(s)	181, 319, 1828, 2305
TaqI	TCGA	6 cut(s)	88, 630, 648, 787, 1097, 1558
TauI	GCSGC	1 cut(s)	2106
TscAI	CASTG	5 cut(s)	49, 484, 1063, 1594, 2116
TseFI	GTSAC	3 cut(s)	317, 801, 1081
TseI	GCWGC	6 cut(s)	716, 910, 956, 1033, 1442, 2171
Tsp45I	GTSAC	3 cut(s)	317, 801, 1081
TspGWI	ACGGA	4 cut(s)	382, 1550, 1863, 1970
TspRI	CASTG	5 cut(s)	49, 484, 1063, 1594, 2116
Van91I	CCANNNNNTGG	2 cut(s)	994, 1651
Vha464I	CTTAAG	2 cut(s)	914, 1622
VpaK11BI	GGWCC	1 cut(s)	1264
XagI	CCTNNNNNAGG	1 cut(s)	1952
XapI	RAATTY	7 cut(s)	505, 565, 744, 965, 1155, 1229, 1762
XceI	RCATGY	1 cut(s)	2143
XspI	CTAG	2 cut(s)	953, 2229

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.