Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002528

Physical Location & Seq

Genomic Coordinates Forward (+)

83329320 .. 83333247

Gene Structure 3928 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036682

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2655 bp

ATGGCTAGACGGCACAGTAGTGAATCAAGTGATGATGATGTGAGGGGTGGAAGAGATAAGTACCGTCAGCATAGAAGTAAAAGCGAGTTGAGGTCAAACAATCATCTTGAGCAGGGTGAGATTGATTCCTCAGATTCTGATAGAGATAATAGAACAAAGAGACAAGGGAGACGGGATGATGAGAAGGAAAGGGAAAGATCCAGTGAGAGGGTTCCCAGTGATAGTAGACATGGAAGGTGGCGGGGTGATCGTCAAGATAGGGATCGACACACTTCTGATGAAGACGGTGAGGTGGCAGAGAAAGAAAGGGATGGGCAAGAAAGGGAAAGGAAAAATGAAAATGGGAACAGACAACGTGAAAGGGATCCCAGTGATAGATATGGAAGGTGGCGGGGTGATCGTCAAGATAGGGATGTACAAACTTCTGATGAAGATGGTGAGCTGGCCGAGAAAGACAGGGGTGGGCAAGAAAGGGAAAGGAAAAATGAAAATGGGAACAGACAACGTGAAAATGGGAATGGTGATAGGGGGAGAGAAAATAGAAGTTCTGAAGATGATGAGCGACTGAAGAGATACCGACATGAGAGTGGACATAGAAGGCGGGAGGACGAGGATGGTCGTAGAAACAGGGACAGGCATTCACGTCACTACTCTGAGCGCAGGGATGAAAGGGAAGAGCGCAGAACTTCGGAACGGAAAAGGGATAGTAGAGATGATGGTAGGCAAAGTAGGCATAGAAACCGGGATGACGATGGTGAGATAAAGTATCGCAGAAATAAGGAGGTGAATGAAAGACGAGAAGACACGGAGCGAGATGATAGAATGCTTGAGAATTCAAAACCTCAAGGACGGTCAACATTGCAAGAGGGAAATCTGAATAATAATGTGGCAAATTTGGGAAAGAGTGGTGGGGTTTATATTCCGCCCTATAAGTTGGCCCGAATGATGAAAGAGGTCGAAGATAAAAGTAGTGTCGAGTATCAACGCTTGACATGGGATGCCCTCCGAAAGAGTATCAATGGGCTTGTGAACAAGGTCAATGCTGCAAACATTAAAAATATAATTCCAGAAATTTTTGCAGAGAATCTCATTCGTGGAAGAGGTCTCTTTTGTCGATCCTGTATGAAGTCACAGATGGCATCTCCAGGATTTACAGACGTCTTTGCTGGCTTGGTTGCTGTTGTTAACACCAAGTTTCCTGAGGTTGGTGAACTTCTGTTGAGAAGAATCGTCTTGCAGCTTAAGAGAGCATTTAAGCGGAACGACAAGCCACAACTACTAGCTGCTGTCAAATTTATCGCGCATCTCGTCAACCAACAAGTGGCTCATGAGATTATAGCTTTGGAATTGCTTACTGTGCTGCTGGAGAACCCTACCGATGACAGTGTTGAAGTTGCTGTTGGCTTTGTCACAGAGTGTGGATCGATACTGCAAGACCTTTCACCTAAAGGGCTCCATGGCATCTTTGAGCGCTTCCGTGGAATTCTTCATGAAGGAGAAATTGACAAACGAGTTCAGTTTTTGATCGAGGGCTTATTTGCATTACGAAAAGCAAAATTTCAGGGGCACCCAGCTGTTCGTCCAGAACTGGACCTTGTTGAGCAAGAAGACCAGTTAACTCATGAGATTTCTCTTCAAGAGGAGATAAATCCAGAAATTACCCTTGATATTTTCAAGCCTGATCCTGATTTCATTGAGAATGAGAAGCGCTATGAAGATGTGAAGAAAACAATTCTTGGTGAAGACTCTGAAGAGGAAGGTTCTGATGCAGCTTCAGATGGTGAGGATGACGATGATGATGATGAGGAGGACGAAGATGATGATGAGGAGGAGGACGAGCAAGAAATGAAAATAAGAGATGAGACGGAGACGAATCTTGTGAATCTTCGAAGGACGATATATCTGACTATCATGTCCAGTGTAGATTTTGAGGAAGCAGGTCATAAGCTCCTTAAGATTAAGCTTGAGCCAGGCCAAGAGATGGAGCTATGTGTTATGCTTTTGGAATGTTGCAGTCAGGAGAGAACCTACCTCCGCTATTATGGTCTCTTGGGACAGCGGTTCTGCATGATCAACAGAATCCACCAGGAAAATTTTGAGAAATGTTTTGTCCAGCAGTATTCAATGATTCACCGGCTTGAAACAAACAAGCTACGTAATGTAGCTAAGTTTTTTGCGCATTTACTCGGAACAGATGCCCTTCCGTGGCATTGCTTAGCCTATATACGGTTAACTGAAGAGGACACCACTTCTTCTTCTCGTATTTTTATCAAGATCCTTTTCCAGGAATTGTCAGAGCATCTTGGTATCCGTCTGCTTAATGAGCGGTTGACTGATCCTGCAATGCAAGAATCTTATGAATCTATTTTCCCAAGGGATAATCCCAAGAACACCCGATTTGCAATTAACTTTTTCACATCCATTGGGCTTGGCGGCATCACTGAGAACCTGCGTGAGTATTTGAAGCACATGCCACGCCTTATTATGCAACAACAAAAAGCAGCGTCAGATGAAGAATCCGACAGTTCTGGTTCATCGGATTCGGACTCGGACTCAGGGTCGGCTAGTTCTGAGTCAGAATCAGGATCATCAAGCTCTGAAAGTGAAAGTGATCGCGATGAAAGACGCAAGAAGAAACGTAGGAGGAGAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071006 GO:0071012 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

885

Amino Acids

103.15

Weight (kDa)

5.42

Isoelectric Point (pI)

62.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	337 - 518	1.2e-13	MIF4G domain
MA3	PF02847	629 - 735	1e-30	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80930
fragaria_vesca	FvH4_3g01450 FvH4_3g43230 FvH4_3g43240 FvH4_3g43240
malus_domestica	MD03G1023500.v1.1 MD11G1028600.v1.1
prunus_persica	Prupe.6G022700_v2.0.a1 Prupe.6G022700_v2.0.a1
pyrus_communis	pycom03g02010 pycom11g02210
rosa_chinensis	RchiOBHm_Chr5g0002291 RchiOBHm_Chr5g0077281 RchiOBHm_Chr5g0077291
rosa_laevigata	RLG00000031014 RLG00000036681 RLG00000036682
rosa_multiflora	Rmu_co8446135.1_g000001 Rmu_sc0000433.1_g000042 Rmu_sc0001492.1_g000008 Rmu_sc0005576.1_g000001 Rmu_sc0006137.1_g000009 Rmu_sc0008383.1_g000001 Rmu_sc0013155.1_g000012 Rmu_ssc0000410.1_g000040
rosa_roxburghii	Rroxscaffold_1G00004680 Rroxscaffold_1G00073650
rosa_rugosa	Rorug04G0394900 Rorug05G0453500
rosa_samantha	Rh5AG017700 Rh5AG508400 Rh5AG508500 Rh5BG020300 Rh5BG529600 Rh5CG019100 Rh5CG019400 Rh5CG554100 Rh5DG018300 Rh5DG542200
rosa_wichuraiana	Rw5G046900 Rw5G046910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1912
AatII	GACGTC	1 cut(s)	1161
Acc16I	TGCGCA	1 cut(s)	2178
Acc36I	ACCTGC	2 cut(s)	1928, 2457
AccB1I	GGYRCC	1 cut(s)	1566
AccB7I	CCANNNNNTGG	2 cut(s)	1321, 1981
AccBSI	CCGCTC	1 cut(s)	2326
AccI	GTMKAC	1 cut(s)	226
AccII	CGCG	2 cut(s)	1301, 2616
AciI	CCGC	9 cut(s)	241, 391, 601, 923, 1258, 2035, 2059, 2326, 2433
AcoI	YGGCCR	1 cut(s)	444
AcsI	RAATTY	7 cut(s)	832, 892, 1071, 1292, 1482, 1556, 2092
AcuI	CTGAAG	5 cut(s)	570, 587, 1758, 1770, 2256
AcyI	GRCGYC	1 cut(s)	1158
AdeI	CACNNNGTG	1 cut(s)	1416
AfaI	GTAC	2 cut(s)	62, 417
AfeI	AGCGCT	2 cut(s)	1472, 1709
AfiI	CCNNNNNNNGG	7 cut(s)	207, 1205, 1321, 1981, 2205, 2226, 2284
AflII	CTTAAG	2 cut(s)	1241, 1952
AgsI	TTSAA	7 cut(s)	837, 1391, 1637, 1675, 2124, 2141, 2464
AhdI	GACNNNNNGTC	1 cut(s)	2557
AjiI	CACGTC	1 cut(s)	644
AjnI	CCWGG	4 cut(s)	1144, 1969, 2085, 2283
AjuI	GAANNNNNNNTTGG	2 cut(s)	1383, 1415
AleI	CACNNNNGTG	1 cut(s)	18
Alw26I	GTCTC	6 cut(s)	154, 163, 1109, 1856, 1862, 2051
AlwNI	CAGNNNCTG	1 cut(s)	137
Aor51HI	AGCGCT	2 cut(s)	1472, 1709
AoxI	GGCC	3 cut(s)	444, 936, 1972
ApeKI	GCWGC	6 cut(s)	1043, 1237, 1283, 1360, 1769, 2501
ApoI	RAATTY	7 cut(s)	832, 892, 1071, 1292, 1482, 1556, 2092
AspLEI	GCGC	6 cut(s)	660, 681, 1303, 1473, 1710, 2179
AspS9I	GGNCC	2 cut(s)	937, 1591
AsuC2I	CCSGG	1 cut(s)	743
AsuII	TTCGAA	1 cut(s)	1888
AvaII	GGWCC	1 cut(s)	1591
AxyI	CCTNAGG	1 cut(s)	1200
BaeGI	GKGCMC	1 cut(s)	1569
BamHI	GGATCC	1 cut(s)	364
BanI	GGYRCC	1 cut(s)	1566
BanII	GRGCYC	1 cut(s)	1455
BbsI	GAAGAC	4 cut(s)	288, 807, 1614, 1749
BbvI	GCAGC	6 cut(s)	1030, 1249, 1270, 1347, 1781, 2513
BccI	CCATC	8 cut(s)	305, 428, 608, 710, 746, 1129, 1772, 1975
BceAI	ACGGC	1 cut(s)	26
BciT130I	CCWGG	4 cut(s)	1146, 1971, 2087, 2285
BciVI	GTATCC	1 cut(s)	2318
BclI	TGATCA	1 cut(s)	2070
BcnI	CCSGG	1 cut(s)	743
BcoDI	GTCTC	6 cut(s)	154, 163, 1109, 1856, 1862, 2051
BfaI	CTAG	3 cut(s)	6, 1280, 2565
BfoI	RGCGCY	2 cut(s)	1474, 1711
BfrI	CTTAAG	2 cut(s)	1241, 1952
BfuAI	ACCTGC	2 cut(s)	1928, 2457
BfuI	GTATCC	1 cut(s)	2318
BisI	GCNGC	7 cut(s)	1044, 1238, 1284, 1361, 1770, 2434, 2502
BlpI	GCTNAGC	1 cut(s)	2215
BlsI	GCNGC	7 cut(s)	1045, 1239, 1285, 1362, 1771, 2435, 2503
Bme1390I	CCNGG	5 cut(s)	743, 1146, 1971, 2087, 2285
Bme18I	GGWCC	1 cut(s)	1591
BmeRI	GACNNNNNGTC	1 cut(s)	2557
BmgBI	CACGTC	1 cut(s)	644
BmgT120I	GGNCC	2 cut(s)	937, 1591
BmiI	GGNNCC	4 cut(s)	213, 366, 1454, 1568
BmrFI	CCNGG	5 cut(s)	743, 1146, 1971, 2087, 2285
BmrI	ACTGGG	2 cut(s)	210, 363
BmsI	GCATC	8 cut(s)	988, 1148, 1312, 1470, 1756, 2185, 2308, 2445
BmuI	ACTGGG	2 cut(s)	210, 363
BpiI	GAAGAC	4 cut(s)	288, 807, 1614, 1749
BpmI	CTGGAG	2 cut(s)	1128, 1385
Bpu1102I	GCTNAGC	1 cut(s)	2215
Bpu14I	TTCGAA	1 cut(s)	1888
BpuEI	CTTGAG	4 cut(s)	128, 828, 848, 1985
BpuMI	CCSGG	1 cut(s)	743
Bsa29I	ATCGAT	1 cut(s)	1424
BsaAI	YACGTR	1 cut(s)	2156
BsaBI	GATNNNNATC	1 cut(s)	261
BsaHI	GRCGYC	1 cut(s)	1158
BsaI	GGTCTC	2 cut(s)	1109, 2051
BsaJI	CCNNGG	4 cut(s)	1456, 1477, 2204, 2372
Bsc4I	CCNNNNNNNGG	7 cut(s)	207, 1205, 1321, 1981, 2205, 2226, 2284
Bse118I	RCCGGY	1 cut(s)	2133
Bse1I	ACTGG	6 cut(s)	201, 216, 369, 1593, 1612, 1917
Bse21I	CCTNAGG	1 cut(s)	1200
Bse3DI	GCAATG	3 cut(s)	857, 2209, 2349
Bse8I	GATNNNNATC	1 cut(s)	261
BseBI	CCWGG	4 cut(s)	1146, 1971, 2087, 2285
BseCI	ATCGAT	1 cut(s)	1424
BseDI	CCNNGG	4 cut(s)	1456, 1477, 2204, 2372
BseGI	GGATG	9 cut(s)	181, 316, 418, 619, 670, 751, 1003, 1792, 2417
BseJI	GATNNNNATC	1 cut(s)	261
BseLI	CCNNNNNNNGG	7 cut(s)	207, 1205, 1321, 1981, 2205, 2226, 2284
BseMI	GCAATG	3 cut(s)	857, 2209, 2349
BseMII	CTCAG	6 cut(s)	144, 645, 1191, 2433, 2562, 2568
BseNI	ACTGG	6 cut(s)	201, 216, 369, 1593, 1612, 1917
BseRI	GAGGAG	4 cut(s)	1655, 1820, 1841, 1844
BseSI	GKGCMC	1 cut(s)	1569
BseXI	GCAGC	6 cut(s)	1030, 1249, 1270, 1347, 1781, 2513
BseYI	CCCAGC	1 cut(s)	1570
Bsh1236I	CGCG	2 cut(s)	1301, 2616
BshFI	GGCC	3 cut(s)	446, 938, 1974
BshNI	GGYRCC	1 cut(s)	1566
BshVI	ATCGAT	1 cut(s)	1424
BsiSI	CCGG	2 cut(s)	742, 2134
BslFI	GGGAC	2 cut(s)	644, 2067
BslI	CCNNNNNNNGG	7 cut(s)	207, 1205, 1321, 1981, 2205, 2226, 2284
BsmAI	GTCTC	6 cut(s)	154, 163, 1109, 1856, 1862, 2051
BsmBI	CGTCTC	3 cut(s)	163, 1856, 1862
BsmFI	GGGAC	2 cut(s)	644, 2067
BsmI	GAATGC	2 cut(s)	637, 828
BsnI	GGCC	3 cut(s)	446, 938, 1974
Bso31I	GGTCTC	2 cut(s)	1109, 2051
Bsp119I	TTCGAA	1 cut(s)	1888
Bsp1286I	GDGCHC	2 cut(s)	1455, 1569
Bsp1407I	TGTACA	1 cut(s)	415
Bsp1720I	GCTNAGC	1 cut(s)	2215
Bsp19I	CCATGG	1 cut(s)	1456
Bsp68I	TCGCGA	1 cut(s)	2616
BspACI	CCGC	9 cut(s)	241, 391, 601, 923, 1258, 2035, 2059, 2326, 2433
BspANI	GGCC	3 cut(s)	446, 938, 1974
BspCNI	CTCAG	6 cut(s)	143, 646, 1192, 2434, 2563, 2567
BspDI	ATCGAT	1 cut(s)	1424
BspFNI	CGCG	2 cut(s)	1301, 2616
BspHI	TCATGA	3 cut(s)	1327, 1489, 1621
BspLI	GGNNCC	4 cut(s)	213, 366, 1454, 1568
BspMI	ACCTGC	2 cut(s)	1928, 2457
BspQI	GCTCTTC	1 cut(s)	669
BspT104I	TTCGAA	1 cut(s)	1888
BspT107I	GGYRCC	1 cut(s)	1566
BspTI	CTTAAG	2 cut(s)	1241, 1952
BspTNI	GGTCTC	2 cut(s)	1109, 2051
BsrBI	CCGCTC	1 cut(s)	2326
BsrDI	GCAATG	3 cut(s)	857, 2209, 2349
BsrFI	RCCGGY	1 cut(s)	2133
BsrGI	TGTACA	1 cut(s)	415
BsrI	ACTGG	6 cut(s)	201, 216, 369, 1593, 1612, 1917
BssAI	RCCGGY	1 cut(s)	2133
BssECI	CCNNGG	4 cut(s)	1456, 1477, 2204, 2372
BssNI	GRCGYC	1 cut(s)	1158
BssT1I	CCWWGG	2 cut(s)	1456, 2372
Bst2UI	CCWGG	4 cut(s)	1146, 1971, 2087, 2285
Bst4CI	ACNGT	8 cut(s)	17, 65, 287, 852, 1357, 1385, 2229, 2525
Bst6I	CTCTTC	7 cut(s)	46, 563, 669, 1093, 1638, 1746, 2232
BstACI	GRCGYC	1 cut(s)	1158
BstAFI	CTTAAG	2 cut(s)	1241, 1952
BstAUI	TGTACA	1 cut(s)	415
BstBAI	YACGTR	1 cut(s)	2156
BstBI	TTCGAA	1 cut(s)	1888
BstC8I	GCNNGC	2 cut(s)	444, 1168
BstDEI	CTNAG	8 cut(s)	130, 654, 1200, 2166, 2215, 2442, 2554, 2571
BstDSI	CCRYGG	3 cut(s)	1456, 1477, 2204
BstENI	CCTNNNNNAGG	1 cut(s)	2282
BstF5I	GGATG	9 cut(s)	181, 316, 418, 619, 670, 751, 1003, 1792, 2417
BstFNI	CGCG	2 cut(s)	1301, 2616
BstH2I	RGCGCY	2 cut(s)	1474, 1711
BstHHI	GCGC	6 cut(s)	660, 681, 1303, 1473, 1710, 2179
BstMAI	GTCTC	6 cut(s)	154, 163, 1109, 1856, 1862, 2051
BstMWI	GCNNNNNNNGC	3 cut(s)	730, 1357, 2323
BstNI	CCWGG	4 cut(s)	1146, 1971, 2087, 2285
BstNSI	RCATGY	1 cut(s)	2473
BstSCI	CCNGG	5 cut(s)	741, 1144, 1969, 2085, 2283
BstSLI	GKGCMC	1 cut(s)	1569
BstSNI	TACGTA	1 cut(s)	2156
BstUI	CGCG	2 cut(s)	1301, 2616
BstV1I	GCAGC	6 cut(s)	1030, 1249, 1270, 1347, 1781, 2513
BstV2I	GAAGAC	4 cut(s)	288, 807, 1614, 1749
BstX2I	RGATCY	3 cut(s)	197, 364, 2274
BstYI	RGATCY	3 cut(s)	197, 364, 2274
Bsu15I	ATCGAT	1 cut(s)	1424
Bsu36I	CCTNAGG	1 cut(s)	1200
BsuI	GTATCC	1 cut(s)	2318
BsuRI	GGCC	3 cut(s)	446, 938, 1974
BsuTUI	ATCGAT	1 cut(s)	1424
BtgI	CCRYGG	3 cut(s)	1456, 1477, 2204
BtgZI	GCGATG	1 cut(s)	2631
BtrI	CACGTC	1 cut(s)	644
BtsCI	GGATG	9 cut(s)	181, 316, 418, 619, 670, 751, 1003, 1792, 2417
BtsIMutI	CAGTG	6 cut(s)	208, 223, 376, 1390, 1924, 2439
BtuMI	TCGCGA	1 cut(s)	2616
BveI	ACCTGC	2 cut(s)	1928, 2457
Cac8I	GCNNGC	2 cut(s)	444, 1168
CaiI	CAGNNNCTG	1 cut(s)	137
CciI	TCATGA	3 cut(s)	1327, 1489, 1621
CfoI	GCGC	6 cut(s)	660, 681, 1303, 1473, 1710, 2179
Cfr10I	RCCGGY	1 cut(s)	2133
Cfr13I	GGNCC	2 cut(s)	937, 1591
ClaI	ATCGAT	1 cut(s)	1424
CseI	GACGC	2 cut(s)	2493, 2634
Csp6I	GTAC	2 cut(s)	61, 416
CviQI	GTAC	2 cut(s)	61, 416
DdeI	CTNAG	8 cut(s)	130, 654, 1200, 2166, 2215, 2442, 2554, 2571
DraIII	CACNNNGTG	1 cut(s)	1416
DrdI	GACNNNNNNGTC	1 cut(s)	1912
DriI	GACNNNNNGTC	1 cut(s)	2557
DseDI	GACNNNNNNGTC	1 cut(s)	1912
EaeI	YGGCCR	1 cut(s)	444
Eam1104I	CTCTTC	7 cut(s)	46, 563, 669, 1093, 1638, 1746, 2232
Eam1105I	GACNNNNNGTC	1 cut(s)	2557
EarI	CTCTTC	7 cut(s)	46, 563, 669, 1093, 1638, 1746, 2232
EciI	GGCGGA	1 cut(s)	912
Eco105I	TACGTA	1 cut(s)	2156
Eco130I	CCWWGG	2 cut(s)	1456, 2372
Eco24I	GRGCYC	1 cut(s)	1455
Eco31I	GGTCTC	2 cut(s)	1109, 2051
Eco47I	GGWCC	1 cut(s)	1591
Eco47III	AGCGCT	2 cut(s)	1472, 1709
Eco57I	CTGAAG	5 cut(s)	570, 587, 1758, 1770, 2256
Eco81I	CCTNAGG	1 cut(s)	1200
EcoNI	CCTNNNNNAGG	1 cut(s)	2282
EcoRI	GAATTC	2 cut(s)	832, 1482
EcoRII	CCWGG	4 cut(s)	1144, 1969, 2085, 2283
EcoT14I	CCWWGG	2 cut(s)	1456, 2372
EcoT38I	GRGCYC	1 cut(s)	1455
ErhI	CCWWGG	2 cut(s)	1456, 2372
Esp3I	CGTCTC	3 cut(s)	163, 1856, 1862
FaqI	GGGAC	2 cut(s)	644, 2067
FauI	CCCGC	3 cut(s)	234, 384, 594
FbaI	TGATCA	1 cut(s)	2070
FblI	GTMKAC	1 cut(s)	226
Fnu4HI	GCNGC	7 cut(s)	1044, 1238, 1284, 1361, 1770, 2434, 2502
FokI	GGATG	9 cut(s)	188, 323, 425, 626, 677, 758, 1010, 1799, 2404
FriOI	GRGCYC	1 cut(s)	1455
Fsp4HI	GCNGC	7 cut(s)	1044, 1238, 1284, 1361, 1770, 2434, 2502
FspBI	CTAG	3 cut(s)	6, 1280, 2565
FspI	TGCGCA	1 cut(s)	2178
GlaI	GCGC	6 cut(s)	659, 680, 1302, 1472, 1709, 2178
GluI	GCNGC	7 cut(s)	1044, 1238, 1284, 1361, 1770, 2434, 2502
GsaI	CCCAGC	1 cut(s)	1574
GsuI	CTGGAG	2 cut(s)	1128, 1385
HaeII	RGCGCY	2 cut(s)	1474, 1711
HaeIII	GGCC	3 cut(s)	446, 938, 1974
HapII	CCGG	2 cut(s)	742, 2134
HgaI	GACGC	2 cut(s)	2493, 2634
HhaI	GCGC	6 cut(s)	660, 681, 1303, 1473, 1710, 2179
Hin1I	GRCGYC	1 cut(s)	1158
Hin6I	GCGC	6 cut(s)	658, 679, 1301, 1471, 1708, 2177
HinP1I	GCGC	6 cut(s)	658, 679, 1301, 1471, 1708, 2177
HincII	GTYRAC	6 cut(s)	855, 1186, 1312, 1617, 2232, 2331
HindII	GTYRAC	6 cut(s)	855, 1186, 1312, 1617, 2232, 2331
HindIII	AAGCTT	1 cut(s)	1961
HpaI	GTTAAC	3 cut(s)	1186, 1617, 2232
HpaII	CCGG	2 cut(s)	742, 2134
HpyAV	CCTTC	8 cut(s)	178, 228, 378, 591, 1487, 1751, 1884, 2210
HpyCH4III	ACNGT	8 cut(s)	17, 65, 287, 852, 1357, 1385, 2229, 2525
HpyCH4IV	ACGT	6 cut(s)	355, 505, 643, 1158, 2155, 2638
HpyF10VI	GCNNNNNNNGC	3 cut(s)	730, 1357, 2323
HpyF3I	CTNAG	8 cut(s)	130, 654, 1200, 2166, 2215, 2442, 2554, 2571
HpySE526I	ACGT	6 cut(s)	355, 505, 643, 1158, 2155, 2638
Hsp92I	GRCGYC	1 cut(s)	1158
HspAI	GCGC	6 cut(s)	658, 679, 1301, 1471, 1708, 2177
Ksp22I	TGATCA	1 cut(s)	2070
KspAI	GTTAAC	3 cut(s)	1186, 1617, 2232
LguI	GCTCTTC	1 cut(s)	669
LmnI	GCTCC	4 cut(s)	808, 1458, 1953, 1984
Lsp1109I	GCAGC	6 cut(s)	1030, 1249, 1270, 1347, 1781, 2513
LweI	GCATC	8 cut(s)	988, 1148, 1312, 1470, 1756, 2185, 2308, 2445
MaeI	CTAG	3 cut(s)	6, 1280, 2565
MaeII	ACGT	6 cut(s)	355, 505, 643, 1158, 2155, 2638
MaeIII	GTNAC	3 cut(s)	644, 1128, 1408
MbiI	CCGCTC	1 cut(s)	2326
MflI	RGATCY	3 cut(s)	197, 364, 2274
MhlI	GDGCHC	2 cut(s)	1455, 1569
MlyI	GAGTC	4 cut(s)	1739, 2540, 2546, 2582
MmeI	TCCRAC	1 cut(s)	2544
MslI	CAYNNNNRTG	2 cut(s)	18, 585
MspA1I	CMGCKG	2 cut(s)	1574, 2059
MspCI	CTTAAG	2 cut(s)	1241, 1952
MspI	CCGG	2 cut(s)	742, 2134
MspR9I	CCNGG	5 cut(s)	743, 1146, 1971, 2087, 2285
Mva1269I	GAATGC	2 cut(s)	637, 828
MvaI	CCWGG	4 cut(s)	1146, 1971, 2087, 2285
MvnI	CGCG	2 cut(s)	1301, 2616
MwoI	GCNNNNNNNGC	3 cut(s)	730, 1357, 2323
NciI	CCSGG	1 cut(s)	743
NcoI	CCATGG	1 cut(s)	1456
NlaIV	GGNNCC	4 cut(s)	213, 366, 1454, 1568
NmeAIII	GCCGAG	1 cut(s)	472
NmuCI	GTSAC	3 cut(s)	644, 1128, 1408
NruI	TCGCGA	1 cut(s)	2616
NsbI	TGCGCA	1 cut(s)	2178
NspI	RCATGY	1 cut(s)	2473
NspV	TTCGAA	1 cut(s)	1888
OliI	CACNNNNGTG	1 cut(s)	18
PagI	TCATGA	3 cut(s)	1327, 1489, 1621
PciSI	GCTCTTC	1 cut(s)	669
PcsI	WCGNNNNNNNCGW	1 cut(s)	1305
PctI	GAATGC	2 cut(s)	637, 828
PflMI	CCANNNNNTGG	2 cut(s)	1321, 1981
PfoI	TCCNGGA	2 cut(s)	1144, 2283
PkrI	GCNGC	7 cut(s)	1045, 1239, 1285, 1362, 1771, 2435, 2503
PleI	GAGTC	4 cut(s)	1739, 2540, 2546, 2581
PpsI	GAGTC	4 cut(s)	1739, 2540, 2546, 2581
Ppu21I	YACGTR	1 cut(s)	2156
Psp6I	CCWGG	4 cut(s)	1144, 1969, 2085, 2283
PspFI	CCCAGC	1 cut(s)	1570
PspGI	CCWGG	4 cut(s)	1144, 1969, 2085, 2283
PspN4I	GGNNCC	4 cut(s)	213, 366, 1454, 1568
PspPI	GGNCC	2 cut(s)	937, 1591
PstNI	CAGNNNCTG	1 cut(s)	137
PsuI	RGATCY	3 cut(s)	197, 364, 2274
PvuII	CAGCTG	1 cut(s)	1574
RruI	TCGCGA	1 cut(s)	2616
RsaI	GTAC	2 cut(s)	62, 417
RsaNI	GTAC	2 cut(s)	61, 416
RseI	CAYNNNNRTG	2 cut(s)	18, 585
SapI	GCTCTTC	1 cut(s)	669
SatI	GCNGC	7 cut(s)	1044, 1238, 1284, 1361, 1770, 2434, 2502
Sau96I	GGNCC	2 cut(s)	937, 1591
SchI	GAGTC	4 cut(s)	1739, 2540, 2546, 2582
ScrFI	CCNGG	5 cut(s)	743, 1146, 1971, 2087, 2285
SduI	GDGCHC	2 cut(s)	1455, 1569
SfaNI	GCATC	8 cut(s)	988, 1148, 1312, 1470, 1756, 2185, 2308, 2445
SfuI	TTCGAA	1 cut(s)	1888
SinI	GGWCC	1 cut(s)	1591
SmiMI	CAYNNNNRTG	2 cut(s)	18, 585
SmlI	CTYRAG	6 cut(s)	107, 827, 843, 1241, 1952, 1964
SmoI	CTYRAG	6 cut(s)	107, 827, 843, 1241, 1952, 1964
SnaBI	TACGTA	1 cut(s)	2156
SsiI	CCGC	9 cut(s)	241, 391, 601, 923, 1258, 2035, 2059, 2326, 2433
SspMI	CTAG	3 cut(s)	6, 1280, 2565
StyD4I	CCNGG	5 cut(s)	741, 1144, 1969, 2085, 2283
StyI	CCWWGG	2 cut(s)	1456, 2372
TaaI	ACNGT	8 cut(s)	17, 65, 287, 852, 1357, 1385, 2229, 2525
TaiI	ACGT	6 cut(s)	358, 508, 646, 1161, 2158, 2641
TaqI	TCGA	7 cut(s)	265, 957, 975, 1114, 1424, 1527, 1888
TatI	WGTACW	1 cut(s)	415
TauI	GCSGC	1 cut(s)	2436
TscAI	CASTG	6 cut(s)	208, 223, 376, 1390, 1924, 2446
TseFI	GTSAC	3 cut(s)	644, 1128, 1408
TseI	GCWGC	6 cut(s)	1043, 1237, 1283, 1360, 1769, 2501
Tsp45I	GTSAC	3 cut(s)	644, 1128, 1408
TspGWI	ACGGA	6 cut(s)	709, 821, 1466, 1880, 2193, 2300
TspRI	CASTG	6 cut(s)	208, 223, 376, 1390, 1924, 2446
Van91I	CCANNNNNTGG	2 cut(s)	1321, 1981
Vha464I	CTTAAG	2 cut(s)	1241, 1952
VpaK11BI	GGWCC	1 cut(s)	1591
XagI	CCTNNNNNAGG	1 cut(s)	2282
XapI	RAATTY	7 cut(s)	832, 892, 1071, 1292, 1482, 1556, 2092
XceI	RCATGY	1 cut(s)	2473
XmiI	GTMKAC	1 cut(s)	226
XspI	CTAG	3 cut(s)	6, 1280, 2565
ZraI	GACGTC	1 cut(s)	1159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.