Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002528

Physical Location & Seq

Genomic Coordinates Reverse (-)

81250965 .. 81255959

Gene Structure 4995 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G046900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2628 bp

ATGGCTAGACGGCACAGTGGTGAATCGAGTGATGATGATGTGAGGGGTGGAAGAGATAAGTACCGTCAGCATAGAAGTAAAAGTGAGTCGAGGTCAAACAATCATCTTGAACAGGGTGAGATTGATTCCTCAGATTCTGATAGAGATAATAGAACAAAGAGACAAGGGAGACGGGATGATGAGAAGGAAAGGGAAAGGTCCAGTGAGAGGGTTCCCAGTGATAGACATGGAAGGTGGCGGGGTGATCGTCAAGATAGGGATCGACACACTTCTGATGAAGACGGCGAGGTGGCAGAGAAAGACAGGGAAAGGAAAAATGAAAATGGGAACAGACAACGTGAAAGGGATCCCACTGATAGATATGGAAGGTGGCGGGGTGATCGTCAAGATAGGGATGTACAAACTTCTGATGAAGATGGTGAGCTGGCCGAGAAAGACAGGGGTGGGCAAGAAAGGGAAAGGAAAAATGAAAATGGGAACAGACAACGTGAAAATGGGAATGGTGATAGGGGGAGAGAAAATAGAAGTTCTGAAGATGATGAGCGATTGAAGAGATACCGACATGAGAGTGGACATAGAAGGCGGGAGGACGAGGATGGTCGTAGAAACAGGGACAGGCATTCACGTCACTACTCTGAGCGCAGGGATGAAAGGGAAGAGCGCAGAACTTCAGAACGGAAAAGGGATAGTAGAGATGATGGTGGGCAAAGTAGGCATAGAAACCGGGATGACGATGGTGAGATCAAGAATCGCAGAAATAAGAAGGTGAATGAAAGACGAGAAGACACTGAGCGAGATGATAGGATGCTTGAGAATTCAAAACCTCAAGGACGGTCAACATTGCAAGAGGGAAATCTGAATAATAATGTGGCAAATTTGGGAAAGAGTGGTGGGGTTTATATTCCGCCCTATAAGTTGGCCCGAATGATGAAAGAGGTCGAAGATAAAAGTAGCGTCGAGTATCAACGCTTGACATGGGATGCCCTCCGAAAGAGTATCAATGGGCTTGTGAACAAGGTCAATGCTGCAAACATTAAAAATATAATTCCAGAAATTTTTGCAGAGAATCTCATTCGTGGAAGAGGTCTCTTTTGTCGGTCCTGTATGAAGTCACAGATGGCATCTCCAGGATTTACAGATGTCTTTGCTGGCTTGGTTGCTGTTGTTAACACCAAGTTTCCTGAGGTTGGTGAACTTCTGTTGAGAAGAATCGTCTTGCAGCTTAAGAGAGCATTTAAGCGGAACGACAAGCCACAACTACTAGCTGCTGTCAAATTTATCGCGCATCTCGTCAACCAACAAGTGGCTCATGAGATTATAGCATTGGAATTGCTTACTGTGCTGCTGGAGAACCCTACCGATGACAGTGTTGAAGTTGCTGTTGGCTTTGTCACAGAGTGTGGATCGATACTGCAAGACCTTTCACCTAAAGGGCTCCATGGCATCTTTGAGCGCTTTCGTGGAATTCTTCATGAAGGAGAAATTGACAAACGAGTTCAGTTTTTGATCGAAGGCTTATTTGCATTACGAAAAGCAAAATTTCAGGGGCACCCAGCTGTTCGTCCAGAACTGGACCTTGTTGAACAAGAAGACCAGTTAACTCATGAGATTTCTCTTCAAGAGGAGATAAATCCAGAAATTACCCTTGATATTTTCAAGCCTGATCCTGATTTCATTGAGAATGAGAAGCGCTATGAAGATGTGAAGAAAACAATTCTTGGTGAAGACTCTGAAGAGGAAGGTTCTGATGCAGCTTCAGATGGTGAGGATGATGATGATGAGGAGGAGGACGAAGATGATGATGAGGAGGAGGATGAGCAGGAAATGAAAATAAGAGATGAGACGGAGACAAATCTTGTGAATCTTCGAAGGACAATATATCTGACTATCATGTCCAGTGTAGATTTTGAGGAAGCAGGTCATAAGCTCCTTAAGATTAAGCTTGAGCCAGGCCAGGAGATGGAGCTATGTGTCATGCTTTTGGAATGTTGCAGTCAGGAGAGAACCTATCTCCGCTATTATGGTCTCTTGGGACAGCGGTTCTGCATGATCAACAGAATCCACCAGGAAAATTTTGAGAAATGTTTTGTCCAGCAGTATTCAATGATTCACCGGCTTGAAACAAACAAGCTACGTAATGTAGCCAAGTTTTTTGCGCATTTACTGGGAACAGATGCCCTTCCGTGGCATTGCTTAGCCTATATACGGTTAACTGAAGAGGATACCACTTCTTCTTCTCGTATTTTTATCAAGATCCTTTTCCAGGAATTGTCAGAGCATCTTGGTATCCGTCTGCTTAATGAGCGGTTGACTGATCCTGCAATGCAAGACTCTTACGAATCTATTTTCCCGAGGGATAATCCCAAGAACACCCGATTTGCTATTAACTTTTTCACATCCATTGGGCTTGGCGGCATCACTGAGAACCTGCGCGAGTATTTGAAGCACATGCCACGCCTTATTATGCAACAACAAAAAGCAGCGTCAGATGAAGAATCCGACAGTTCTGGTTCATCGGATTCGGACTCAGGGTCGGCTAGTTCTGAGTCAGAATCAGAATCATCAAGCTCTGAAAGTGAAAGTGATCGCGATGAAAGACGCAAGAAGAAACGTAGGAGGAGAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071006 GO:0071012 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

875

Amino Acids

102.02

Weight (kDa)

5.49

Isoelectric Point (pI)

61.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	331 - 512	1.2e-13	MIF4G domain
MA3	PF02847	622 - 728	1e-30	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80930
fragaria_vesca	FvH4_3g01450 FvH4_3g43230 FvH4_3g43240 FvH4_3g43240
malus_domestica	MD03G1023500.v1.1 MD11G1028600.v1.1
prunus_persica	Prupe.6G022700_v2.0.a1 Prupe.6G022700_v2.0.a1
pyrus_communis	pycom03g02010 pycom11g02210
rosa_chinensis	RchiOBHm_Chr5g0002291 RchiOBHm_Chr5g0077281 RchiOBHm_Chr5g0077291
rosa_laevigata	RLG00000031014 RLG00000036681 RLG00000036682
rosa_multiflora	Rmu_co8446135.1_g000001 Rmu_sc0000433.1_g000042 Rmu_sc0001492.1_g000008 Rmu_sc0005576.1_g000001 Rmu_sc0006137.1_g000009 Rmu_sc0008383.1_g000001 Rmu_sc0013155.1_g000012 Rmu_ssc0000410.1_g000040
rosa_roxburghii	Rroxscaffold_1G00004680 Rroxscaffold_1G00073650
rosa_rugosa	Rorug04G0394900 Rorug05G0453500
rosa_samantha	Rh5AG017700 Rh5AG508400 Rh5AG508500 Rh5BG020300 Rh5BG529600 Rh5CG019100 Rh5CG019400 Rh5CG554100 Rh5DG018300 Rh5DG542200
rosa_wichuraiana	Rw5G046900 Rw5G046910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1891
Acc16I	TGCGCA	1 cut(s)	2157
Acc36I	ACCTGC	2 cut(s)	1907, 2436
AccB1I	GGYRCC	1 cut(s)	1548
AccB7I	CCANNNNNTGG	2 cut(s)	1303, 1960
AccBSI	CCGCTC	1 cut(s)	2305
AccII	CGCG	3 cut(s)	1283, 2433, 2589
AciI	CCGC	9 cut(s)	238, 373, 583, 905, 1240, 2014, 2038, 2305, 2412
AclWI	GGATC	7 cut(s)	267, 341, 354, 1411, 1658, 2248, 2309
AcoI	YGGCCR	1 cut(s)	426
AcsI	RAATTY	7 cut(s)	814, 874, 1053, 1274, 1464, 1538, 2071
AcuI	CTGAAG	5 cut(s)	552, 654, 1740, 1752, 2235
AdeI	CACNNNGTG	1 cut(s)	1398
AfaI	GTAC	2 cut(s)	62, 399
AfeI	AGCGCT	2 cut(s)	1454, 1691
AfiI	CCNNNNNNNGG	7 cut(s)	207, 1187, 1303, 1960, 2184, 2205, 2263
AflII	CTTAAG	2 cut(s)	1223, 1931
AhdI	GACNNNNNGTC	1 cut(s)	2530
AjiI	CACGTC	1 cut(s)	626
AjnI	CCWGG	5 cut(s)	1126, 1948, 1953, 2064, 2262
AjuI	GAANNNNNNNTTGG	2 cut(s)	1365, 1397
AleI	CACNNNNGTG	1 cut(s)	18
Alw26I	GTCTC	6 cut(s)	154, 163, 1091, 1835, 1841, 2030
AlwI	GGATC	7 cut(s)	267, 341, 354, 1411, 1658, 2248, 2309
AlwNI	CAGNNNCTG	1 cut(s)	137
Ama87I	CYCGRG	1 cut(s)	2350
Aor51HI	AGCGCT	2 cut(s)	1454, 1691
AoxI	GGCC	3 cut(s)	426, 918, 1951
ApeKI	GCWGC	6 cut(s)	1025, 1219, 1265, 1342, 1751, 2480
ApoI	RAATTY	7 cut(s)	814, 874, 1053, 1274, 1464, 1538, 2071
AspLEI	GCGC	7 cut(s)	642, 663, 1285, 1455, 1692, 2158, 2433
AspS9I	GGNCC	4 cut(s)	198, 919, 1098, 1573
AsuC2I	CCSGG	1 cut(s)	725
AsuII	TTCGAA	1 cut(s)	1867
AvaI	CYCGRG	1 cut(s)	2350
AvaII	GGWCC	3 cut(s)	198, 1098, 1573
AxyI	CCTNAGG	1 cut(s)	1182
BaeGI	GKGCMC	1 cut(s)	1551
BamHI	GGATCC	1 cut(s)	346
BanI	GGYRCC	1 cut(s)	1548
BanII	GRGCYC	1 cut(s)	1437
BbsI	GAAGAC	4 cut(s)	285, 789, 1596, 1731
BbvI	GCAGC	6 cut(s)	1012, 1231, 1252, 1329, 1763, 2492
BccI	CCATC	7 cut(s)	410, 590, 692, 728, 1111, 1754, 1954
BceAI	ACGGC	2 cut(s)	26, 298
BciT130I	CCWGG	5 cut(s)	1128, 1950, 1955, 2066, 2264
BciVI	GTATCC	2 cut(s)	2215, 2297
BclI	TGATCA	1 cut(s)	2049
BcnI	CCSGG	1 cut(s)	725
BcoDI	GTCTC	6 cut(s)	154, 163, 1091, 1835, 1841, 2030
BfaI	CTAG	3 cut(s)	6, 1262, 2538
BfoI	RGCGCY	2 cut(s)	1456, 1693
BfrI	CTTAAG	2 cut(s)	1223, 1931
BfuAI	ACCTGC	2 cut(s)	1907, 2436
BfuI	GTATCC	2 cut(s)	2215, 2297
BisI	GCNGC	7 cut(s)	1026, 1220, 1266, 1343, 1752, 2413, 2481
BlpI	GCTNAGC	1 cut(s)	2194
BlsI	GCNGC	7 cut(s)	1027, 1221, 1267, 1344, 1753, 2414, 2482
Bme1390I	CCNGG	6 cut(s)	725, 1128, 1950, 1955, 2066, 2264
Bme18I	GGWCC	3 cut(s)	198, 1098, 1573
BmeRI	GACNNNNNGTC	1 cut(s)	2530
BmeT110I	CYCGRG	1 cut(s)	2350
BmgBI	CACGTC	1 cut(s)	626
BmgT120I	GGNCC	4 cut(s)	198, 919, 1098, 1573
BmiI	GGNNCC	4 cut(s)	213, 348, 1436, 1550
BmrFI	CCNGG	6 cut(s)	725, 1128, 1950, 1955, 2066, 2264
BmrI	ACTGGG	2 cut(s)	210, 2174
BmsI	GCATC	9 cut(s)	795, 970, 1130, 1294, 1452, 1738, 2164, 2287, 2424
BmuI	ACTGGG	2 cut(s)	210, 2174
BpiI	GAAGAC	4 cut(s)	285, 789, 1596, 1731
BpmI	CTGGAG	2 cut(s)	1110, 1367
Bpu1102I	GCTNAGC	1 cut(s)	2194
Bpu14I	TTCGAA	1 cut(s)	1867
BpuEI	CTTGAG	3 cut(s)	810, 830, 1964
BpuMI	CCSGG	1 cut(s)	725
Bsa29I	ATCGAT	1 cut(s)	1406
BsaAI	YACGTR	1 cut(s)	2135
BsaBI	GATNNNNATC	1 cut(s)	258
BsaI	GGTCTC	2 cut(s)	1091, 2030
BsaJI	CCNNGG	3 cut(s)	1438, 2183, 2351
Bsc4I	CCNNNNNNNGG	7 cut(s)	207, 1187, 1303, 1960, 2184, 2205, 2263
Bse118I	RCCGGY	1 cut(s)	2112
Bse1I	ACTGG	6 cut(s)	201, 216, 1575, 1594, 1896, 2169
Bse21I	CCTNAGG	1 cut(s)	1182
Bse3DI	GCAATG	3 cut(s)	839, 2188, 2328
Bse8I	GATNNNNATC	1 cut(s)	258
BseBI	CCWGG	5 cut(s)	1128, 1950, 1955, 2066, 2264
BseCI	ATCGAT	1 cut(s)	1406
BseDI	CCNNGG	3 cut(s)	1438, 2183, 2351
BseJI	GATNNNNATC	1 cut(s)	258
BseLI	CCNNNNNNNGG	7 cut(s)	207, 1187, 1303, 1960, 2184, 2205, 2263
BseMI	GCAATG	3 cut(s)	839, 2188, 2328
BseMII	CTCAG	7 cut(s)	144, 627, 780, 1173, 2412, 2535, 2541
BseNI	ACTGG	6 cut(s)	201, 216, 1575, 1594, 1896, 2169
BseRI	GAGGAG	5 cut(s)	1637, 1796, 1799, 1820, 1823
BseSI	GKGCMC	1 cut(s)	1551
BseXI	GCAGC	6 cut(s)	1012, 1231, 1252, 1329, 1763, 2492
BseYI	CCCAGC	1 cut(s)	1552
Bsh1236I	CGCG	3 cut(s)	1283, 2433, 2589
BshFI	GGCC	3 cut(s)	428, 920, 1953
BshNI	GGYRCC	1 cut(s)	1548
BshVI	ATCGAT	1 cut(s)	1406
BsiHKCI	CYCGRG	1 cut(s)	2350
BsiSI	CCGG	2 cut(s)	724, 2113
BslFI	GGGAC	2 cut(s)	626, 2046
BslI	CCNNNNNNNGG	7 cut(s)	207, 1187, 1303, 1960, 2184, 2205, 2263
BsmAI	GTCTC	6 cut(s)	154, 163, 1091, 1835, 1841, 2030
BsmBI	CGTCTC	2 cut(s)	163, 1835
BsmFI	GGGAC	2 cut(s)	626, 2046
BsmI	GAATGC	1 cut(s)	619
BsnI	GGCC	3 cut(s)	428, 920, 1953
Bso31I	GGTCTC	2 cut(s)	1091, 2030
BsoBI	CYCGRG	1 cut(s)	2350
Bsp119I	TTCGAA	1 cut(s)	1867
Bsp1286I	GDGCHC	2 cut(s)	1437, 1551
Bsp1407I	TGTACA	1 cut(s)	397
Bsp1720I	GCTNAGC	1 cut(s)	2194
Bsp19I	CCATGG	1 cut(s)	1438
Bsp68I	TCGCGA	1 cut(s)	2589
BspACI	CCGC	9 cut(s)	238, 373, 583, 905, 1240, 2014, 2038, 2305, 2412
BspANI	GGCC	3 cut(s)	428, 920, 1953
BspCNI	CTCAG	7 cut(s)	143, 628, 781, 1174, 2413, 2536, 2540
BspDI	ATCGAT	1 cut(s)	1406
BspFNI	CGCG	3 cut(s)	1283, 2433, 2589
BspHI	TCATGA	3 cut(s)	1309, 1471, 1603
BspLI	GGNNCC	4 cut(s)	213, 348, 1436, 1550
BspMI	ACCTGC	2 cut(s)	1907, 2436
BspPI	GGATC	7 cut(s)	267, 341, 354, 1411, 1658, 2248, 2309
BspQI	GCTCTTC	1 cut(s)	651
BspT104I	TTCGAA	1 cut(s)	1867
BspT107I	GGYRCC	1 cut(s)	1548
BspTI	CTTAAG	2 cut(s)	1223, 1931
BspTNI	GGTCTC	2 cut(s)	1091, 2030
BsrBI	CCGCTC	1 cut(s)	2305
BsrDI	GCAATG	3 cut(s)	839, 2188, 2328
BsrFI	RCCGGY	1 cut(s)	2112
BsrGI	TGTACA	1 cut(s)	397
BsrI	ACTGG	6 cut(s)	201, 216, 1575, 1594, 1896, 2169
BssAI	RCCGGY	1 cut(s)	2112
BssECI	CCNNGG	3 cut(s)	1438, 2183, 2351
BssT1I	CCWWGG	1 cut(s)	1438
Bst2UI	CCWGG	5 cut(s)	1128, 1950, 1955, 2066, 2264
Bst4CI	ACNGT	7 cut(s)	17, 65, 834, 1339, 1367, 2208, 2504
Bst6I	CTCTTC	7 cut(s)	46, 545, 651, 1075, 1620, 1728, 2211
BstAFI	CTTAAG	2 cut(s)	1223, 1931
BstAUI	TGTACA	1 cut(s)	397
BstBAI	YACGTR	1 cut(s)	2135
BstBI	TTCGAA	1 cut(s)	1867
BstC8I	GCNNGC	2 cut(s)	426, 1150
BstDEI	CTNAG	8 cut(s)	130, 636, 789, 1182, 2194, 2421, 2527, 2544
BstDSI	CCRYGG	2 cut(s)	1438, 2183
BstENI	CCTNNNNNAGG	1 cut(s)	2261
BstFNI	CGCG	3 cut(s)	1283, 2433, 2589
BstH2I	RGCGCY	2 cut(s)	1456, 1693
BstHHI	GCGC	7 cut(s)	642, 663, 1285, 1455, 1692, 2158, 2433
BstMAI	GTCTC	6 cut(s)	154, 163, 1091, 1835, 1841, 2030
BstMWI	GCNNNNNNNGC	3 cut(s)	712, 1339, 2302
BstNI	CCWGG	5 cut(s)	1128, 1950, 1955, 2066, 2264
BstNSI	RCATGY	1 cut(s)	2452
BstSCI	CCNGG	6 cut(s)	723, 1126, 1948, 1953, 2064, 2262
BstSLI	GKGCMC	1 cut(s)	1551
BstSNI	TACGTA	1 cut(s)	2135
BstUI	CGCG	3 cut(s)	1283, 2433, 2589
BstV1I	GCAGC	6 cut(s)	1012, 1231, 1252, 1329, 1763, 2492
BstV2I	GAAGAC	4 cut(s)	285, 789, 1596, 1731
BstX2I	RGATCY	2 cut(s)	346, 2253
BstYI	RGATCY	2 cut(s)	346, 2253
Bsu15I	ATCGAT	1 cut(s)	1406
Bsu36I	CCTNAGG	1 cut(s)	1182
BsuI	GTATCC	2 cut(s)	2215, 2297
BsuRI	GGCC	3 cut(s)	428, 920, 1953
BsuTUI	ATCGAT	1 cut(s)	1406
BtgI	CCRYGG	2 cut(s)	1438, 2183
BtgZI	GCGATG	1 cut(s)	2604
BtrI	CACGTC	1 cut(s)	626
BtsIMutI	CAGTG	8 cut(s)	22, 208, 223, 351, 786, 1372, 1903, 2418
BtuMI	TCGCGA	1 cut(s)	2589
BveI	ACCTGC	2 cut(s)	1907, 2436
Cac8I	GCNNGC	2 cut(s)	426, 1150
CaiI	CAGNNNCTG	1 cut(s)	137
CciI	TCATGA	3 cut(s)	1309, 1471, 1603
CfoI	GCGC	7 cut(s)	642, 663, 1285, 1455, 1692, 2158, 2433
Cfr10I	RCCGGY	1 cut(s)	2112
Cfr13I	GGNCC	4 cut(s)	198, 919, 1098, 1573
ClaI	ATCGAT	1 cut(s)	1406
CseI	GACGC	3 cut(s)	943, 2472, 2607
Csp6I	GTAC	2 cut(s)	61, 398
CviQI	GTAC	2 cut(s)	61, 398
DdeI	CTNAG	8 cut(s)	130, 636, 789, 1182, 2194, 2421, 2527, 2544
DraIII	CACNNNGTG	1 cut(s)	1398
DrdI	GACNNNNNNGTC	1 cut(s)	1891
DriI	GACNNNNNGTC	1 cut(s)	2530
DseDI	GACNNNNNNGTC	1 cut(s)	1891
EaeI	YGGCCR	1 cut(s)	426
Eam1104I	CTCTTC	7 cut(s)	46, 545, 651, 1075, 1620, 1728, 2211
Eam1105I	GACNNNNNGTC	1 cut(s)	2530
EarI	CTCTTC	7 cut(s)	46, 545, 651, 1075, 1620, 1728, 2211
EciI	GGCGGA	1 cut(s)	894
Eco105I	TACGTA	1 cut(s)	2135
Eco130I	CCWWGG	1 cut(s)	1438
Eco24I	GRGCYC	1 cut(s)	1437
Eco31I	GGTCTC	2 cut(s)	1091, 2030
Eco47I	GGWCC	3 cut(s)	198, 1098, 1573
Eco47III	AGCGCT	2 cut(s)	1454, 1691
Eco57I	CTGAAG	5 cut(s)	552, 654, 1740, 1752, 2235
Eco81I	CCTNAGG	1 cut(s)	1182
Eco88I	CYCGRG	1 cut(s)	2350
EcoNI	CCTNNNNNAGG	1 cut(s)	2261
EcoRI	GAATTC	2 cut(s)	814, 1464
EcoRII	CCWGG	5 cut(s)	1126, 1948, 1953, 2064, 2262
EcoT14I	CCWWGG	1 cut(s)	1438
EcoT38I	GRGCYC	1 cut(s)	1437
ErhI	CCWWGG	1 cut(s)	1438
Esp3I	CGTCTC	2 cut(s)	163, 1835
FaqI	GGGAC	2 cut(s)	626, 2046
FauI	CCCGC	3 cut(s)	231, 366, 576
FbaI	TGATCA	1 cut(s)	2049
Fnu4HI	GCNGC	7 cut(s)	1026, 1220, 1266, 1343, 1752, 2413, 2481
FriOI	GRGCYC	1 cut(s)	1437
Fsp4HI	GCNGC	7 cut(s)	1026, 1220, 1266, 1343, 1752, 2413, 2481
FspBI	CTAG	3 cut(s)	6, 1262, 2538
FspI	TGCGCA	1 cut(s)	2157
GlaI	GCGC	7 cut(s)	641, 662, 1284, 1454, 1691, 2157, 2432
GluI	GCNGC	7 cut(s)	1026, 1220, 1266, 1343, 1752, 2413, 2481
GsaI	CCCAGC	1 cut(s)	1556
GsuI	CTGGAG	2 cut(s)	1110, 1367
HaeII	RGCGCY	2 cut(s)	1456, 1693
HaeIII	GGCC	3 cut(s)	428, 920, 1953
HapII	CCGG	2 cut(s)	724, 2113
HgaI	GACGC	3 cut(s)	943, 2472, 2607
HhaI	GCGC	7 cut(s)	642, 663, 1285, 1455, 1692, 2158, 2433
Hin6I	GCGC	7 cut(s)	640, 661, 1283, 1453, 1690, 2156, 2431
HinP1I	GCGC	7 cut(s)	640, 661, 1283, 1453, 1690, 2156, 2431
HincII	GTYRAC	6 cut(s)	837, 1168, 1294, 1599, 2211, 2310
HindII	GTYRAC	6 cut(s)	837, 1168, 1294, 1599, 2211, 2310
HindIII	AAGCTT	1 cut(s)	1940
HpaI	GTTAAC	3 cut(s)	1168, 1599, 2211
HpaII	CCGG	2 cut(s)	724, 2113
Hpy166II	GTNNAC	9 cut(s)	572, 837, 1012, 1168, 1193, 1294, 1599, 2211, 2310
Hpy8I	GTNNAC	9 cut(s)	572, 837, 1012, 1168, 1193, 1294, 1599, 2211, 2310
Hpy99I	CGWCG	1 cut(s)	959
HpyCH4III	ACNGT	7 cut(s)	17, 65, 834, 1339, 1367, 2208, 2504
HpyCH4IV	ACGT	5 cut(s)	337, 487, 625, 2134, 2611
HpyF10VI	GCNNNNNNNGC	3 cut(s)	712, 1339, 2302
HpyF3I	CTNAG	8 cut(s)	130, 636, 789, 1182, 2194, 2421, 2527, 2544
HpySE526I	ACGT	5 cut(s)	337, 487, 625, 2134, 2611
HspAI	GCGC	7 cut(s)	640, 661, 1283, 1453, 1690, 2156, 2431
Ksp22I	TGATCA	1 cut(s)	2049
KspAI	GTTAAC	3 cut(s)	1168, 1599, 2211
LguI	GCTCTTC	1 cut(s)	651
LmnI	GCTCC	3 cut(s)	1440, 1932, 1963
Lsp1109I	GCAGC	6 cut(s)	1012, 1231, 1252, 1329, 1763, 2492
LweI	GCATC	9 cut(s)	795, 970, 1130, 1294, 1452, 1738, 2164, 2287, 2424
MaeI	CTAG	3 cut(s)	6, 1262, 2538
MaeII	ACGT	5 cut(s)	337, 487, 625, 2134, 2611
MaeIII	GTNAC	3 cut(s)	626, 1110, 1390
MbiI	CCGCTC	1 cut(s)	2305
MflI	RGATCY	2 cut(s)	346, 2253
MhlI	GDGCHC	2 cut(s)	1437, 1551
MlyI	GAGTC	5 cut(s)	95, 1721, 2324, 2519, 2555
MmeI	TCCRAC	1 cut(s)	2523
MslI	CAYNNNNRTG	2 cut(s)	18, 567
MspA1I	CMGCKG	2 cut(s)	1556, 2038
MspCI	CTTAAG	2 cut(s)	1223, 1931
MspI	CCGG	2 cut(s)	724, 2113
MspR9I	CCNGG	6 cut(s)	725, 1128, 1950, 1955, 2066, 2264
Mva1269I	GAATGC	1 cut(s)	619
MvaI	CCWGG	5 cut(s)	1128, 1950, 1955, 2066, 2264
MvnI	CGCG	3 cut(s)	1283, 2433, 2589
MwoI	GCNNNNNNNGC	3 cut(s)	712, 1339, 2302
NciI	CCSGG	1 cut(s)	725
NcoI	CCATGG	1 cut(s)	1438
NlaIV	GGNNCC	4 cut(s)	213, 348, 1436, 1550
NmeAIII	GCCGAG	1 cut(s)	454
NmuCI	GTSAC	3 cut(s)	626, 1110, 1390
NruI	TCGCGA	1 cut(s)	2589
NsbI	TGCGCA	1 cut(s)	2157
NspI	RCATGY	1 cut(s)	2452
NspV	TTCGAA	1 cut(s)	1867
OliI	CACNNNNGTG	1 cut(s)	18
PagI	TCATGA	3 cut(s)	1309, 1471, 1603
PciSI	GCTCTTC	1 cut(s)	651
PcsI	WCGNNNNNNNCGW	1 cut(s)	1287
PctI	GAATGC	1 cut(s)	619
PflMI	CCANNNNNTGG	2 cut(s)	1303, 1960
PfoI	TCCNGGA	2 cut(s)	1126, 2262
PkrI	GCNGC	7 cut(s)	1027, 1221, 1267, 1344, 1753, 2414, 2482
PleI	GAGTC	5 cut(s)	94, 1721, 2324, 2519, 2554
PpsI	GAGTC	5 cut(s)	94, 1721, 2324, 2519, 2554
Ppu21I	YACGTR	1 cut(s)	2135
Psp6I	CCWGG	5 cut(s)	1126, 1948, 1953, 2064, 2262
PspFI	CCCAGC	1 cut(s)	1552
PspGI	CCWGG	5 cut(s)	1126, 1948, 1953, 2064, 2262
PspN4I	GGNNCC	4 cut(s)	213, 348, 1436, 1550
PspPI	GGNCC	4 cut(s)	198, 919, 1098, 1573
PstNI	CAGNNNCTG	1 cut(s)	137
PsuI	RGATCY	2 cut(s)	346, 2253
PvuII	CAGCTG	1 cut(s)	1556
RruI	TCGCGA	1 cut(s)	2589
RsaI	GTAC	2 cut(s)	62, 399
RsaNI	GTAC	2 cut(s)	61, 398
RseI	CAYNNNNRTG	2 cut(s)	18, 567
SapI	GCTCTTC	1 cut(s)	651
SatI	GCNGC	7 cut(s)	1026, 1220, 1266, 1343, 1752, 2413, 2481
Sau96I	GGNCC	4 cut(s)	198, 919, 1098, 1573
SchI	GAGTC	5 cut(s)	95, 1721, 2324, 2519, 2555
ScrFI	CCNGG	6 cut(s)	725, 1128, 1950, 1955, 2066, 2264
SduI	GDGCHC	2 cut(s)	1437, 1551
SfaNI	GCATC	9 cut(s)	795, 970, 1130, 1294, 1452, 1738, 2164, 2287, 2424
SfuI	TTCGAA	1 cut(s)	1867
SinI	GGWCC	3 cut(s)	198, 1098, 1573
SmiMI	CAYNNNNRTG	2 cut(s)	18, 567
SmlI	CTYRAG	5 cut(s)	809, 825, 1223, 1931, 1943
SmoI	CTYRAG	5 cut(s)	809, 825, 1223, 1931, 1943
SnaBI	TACGTA	1 cut(s)	2135
SsiI	CCGC	9 cut(s)	238, 373, 583, 905, 1240, 2014, 2038, 2305, 2412
SspMI	CTAG	3 cut(s)	6, 1262, 2538
StyD4I	CCNGG	6 cut(s)	723, 1126, 1948, 1953, 2064, 2262
StyI	CCWWGG	1 cut(s)	1438
TaaI	ACNGT	7 cut(s)	17, 65, 834, 1339, 1367, 2208, 2504
TaiI	ACGT	5 cut(s)	340, 490, 628, 2137, 2614
TaqI	TCGA	8 cut(s)	26, 89, 262, 939, 957, 1406, 1509, 1867
TaqII	GACCGA	1 cut(s)	1086
TatI	WGTACW	1 cut(s)	397
TauI	GCSGC	1 cut(s)	2415
TscAI	CASTG	8 cut(s)	22, 208, 223, 358, 793, 1372, 1903, 2425
TseFI	GTSAC	3 cut(s)	626, 1110, 1390
TseI	GCWGC	6 cut(s)	1025, 1219, 1265, 1342, 1751, 2480
Tsp45I	GTSAC	3 cut(s)	626, 1110, 1390
TspGWI	ACGGA	4 cut(s)	691, 1859, 2172, 2279
TspRI	CASTG	8 cut(s)	22, 208, 223, 358, 793, 1372, 1903, 2425
Van91I	CCANNNNNTGG	2 cut(s)	1303, 1960
Vha464I	CTTAAG	2 cut(s)	1223, 1931
VpaK11BI	GGWCC	3 cut(s)	198, 1098, 1573
XagI	CCTNNNNNAGG	1 cut(s)	2261
XapI	RAATTY	7 cut(s)	814, 874, 1053, 1274, 1464, 1538, 2071
XceI	RCATGY	1 cut(s)	2452
XspI	CTAG	3 cut(s)	6, 1262, 2538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.