Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002528

Physical Location & Seq

Genomic Coordinates Forward (+)

83323111 .. 83327217

Gene Structure 4107 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036681

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGCAGGGATTCAGATCTGGAGTAAGCGGAACTGGAACTTTGTGTTTCTGAAGTGCTGGTTTGGCGTAATAACCTTTGACATAAGACGGCACAGTAGTGAATCGAGTGATGATGATGTGAGGGGTGGAAGAGATAAGTACCGTCAGCATAGAAGTAAAAGCGAGTCCAGTCAAGATAGGGATCGACACACTTCTGATGAAAATGGTGAGGTGGCAGAAGAAGACAGGGGTAGGCAAGAAAGGGAAAGGAAAAATGAAAATAGGAACAGACAACATGAAAATGGGAATGGTGATAGGGGGACAGAATATAGAAGTTCTAAGGATTATGAGCGACTGAAGAGATACCGATATGGGAGTGGACATACGAGGCGGGAGAATGAGGATGGTCGTAGAAACAGGGACAGGCATTCACGTCACTACTCTGAGCGCAGGGATGAAAGGGAAGAGCGTAGAACTTCAGAACGGAAAAGGGATAATAGAGATGATGGTAGGCAAAGTAGGCATAGAAACCAATATGAAGATGGTGAGAAAAGTATCGCAGAAATAAGGAGTGGTGGGGTTTATATTCCGCCCTATAAGTTGGCCCGAGTGATGAAAGAGGTCGAAGATAAAAGTAGCGTTGAGTATCAGCGCTTGACATGCGATGCCCTCCGAAAGAGTATCAATGGGCTTTTGAACAAGGTCACTGCTGCAAACATTAAGAATATAATTCCAGAAATTTTTGCAGAGAATCTTATTCGTGGAAGAGGATTTACAGACGTCTTTGCTGGCTTGGTGGCTGTTGTTAACACCAAGTTTCCTGAGGTTGGTGAACTTTTGTTGAGAAGAATCGTCTTACAGCTTAAGAGAGGATTTAAGCCGAATGACAAGCCACAACTACTAGCTCCTGTCAAATTTATCGCGCATATTGTCAACCAACAAGTGGCTCATGAGATTATAGCATTGGAATTGCTCACTGTGCTGCTGGAGACTCCTATCGATGATGGTGTTGAAGTTGCTGTTGGCTTTGTCACAGAGTGTGGATCAATACTGCAAGACCTTTCACCTAAAGGGCTCCAAGGCATCTTTGAACGCTTTGGTGGAATTCTTCATGAAGGAAAAATTGACAAACGAGTTCAGTGGTTGATCGAAGGCTTATTTGCATTATGGAAAGCAAGGTTTCAGGGGCACCCAGCTGTTCGTCCAGAACTGAACCTTGTTGAGCAAGAAGACCAGTTAACTCATGATATTTCTCTTCAAGAGGAGATAAATCCAGAAATTACCCTTGATATTTTCAAGCCTGATCCTGATTTCATTGAGAATGAGAAGCGCTATGAAGATGTGAAGAAAACAATTCTTGGTTCTGATGCAGCTTCAGATGGTGAGGATGATAATGATGATGAGGAGGACGATGATGATGATGAGACGGAGACGAATCTTGTGAATCTTCGAAGGACAATATATCTGACTATTATGTCCAGTGTAGATTTTGAGGAAGCAGGTCATAAGCTTCTTACAATTAAGCTTGAGCCAGGCCAAGAGATGGAGCTATGTGTCAGGCTTTTGGAATGTTGCAGTCAGGAGAGAACCTACCTCCGCTATTATGGTCTCTTGGGACAGCGGTTCTGCATGATCAACAGAATCCACCAGGAAAATTTTGAGAAATGTTTTGTACAACAGTATTCAATGATTCACCGGCTTGAAACAAACAAGCTACGTAATGTAGCCAAGTTTTTTGCGCATTTACTCGGAACAGATGCCCTTCCGTGGCATTGCTTAGCCTATATACGGTTAACTGAAGAGGAAACCACCACTTCTTGTCGTATTTTTATCAAGATCCTTTTCCAGGAATTGTCAGAGCATCTTGGTATCCGTCTGCTTAATGAGCGGTTGACTGATCCTGCAATGGATAATCCCAAGAACACCCGATTTGCTATTAACTTTTTCACATCCATTGGTCTTGGCGGCATCACTGTGAACCTGCGTGAGTATTTGAACCACATGCCACGCCTTATTATGCAACAACAAAAAGCAGCGTCAGATGAAGAATCCGACAGTTCTGGTTCATTGGATTCAGACTCGAACTCAGGGTCGGCTAGTTCCGAGTCAGAATCAGAATCACAATCAGAATCGTCAGGCTCTGAAGGACGCAAGAAGAAACGTAGGAGGAGAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0071006 GO:0071012 GO:0071013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

719

Amino Acids

83.21

Weight (kDa)

5.91

Isoelectric Point (pI)

56.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIF4G	PF02854	215 - 382	3.2e-07	MIF4G domain
MA3	PF02847	476 - 582	1.3e-29	MA3 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80930
fragaria_vesca	FvH4_3g01450 FvH4_3g43230 FvH4_3g43240 FvH4_3g43240
malus_domestica	MD03G1023500.v1.1 MD11G1028600.v1.1
prunus_persica	Prupe.6G022700_v2.0.a1 Prupe.6G022700_v2.0.a1
pyrus_communis	pycom03g02010 pycom11g02210
rosa_chinensis	RchiOBHm_Chr5g0002291 RchiOBHm_Chr5g0077281 RchiOBHm_Chr5g0077291
rosa_laevigata	RLG00000031014 RLG00000036681 RLG00000036682
rosa_multiflora	Rmu_co8446135.1_g000001 Rmu_sc0000433.1_g000042 Rmu_sc0001492.1_g000008 Rmu_sc0005576.1_g000001 Rmu_sc0006137.1_g000009 Rmu_sc0008383.1_g000001 Rmu_sc0013155.1_g000012 Rmu_ssc0000410.1_g000040
rosa_roxburghii	Rroxscaffold_1G00004680 Rroxscaffold_1G00073650
rosa_rugosa	Rorug04G0394900 Rorug05G0453500
rosa_samantha	Rh5AG017700 Rh5AG508400 Rh5AG508500 Rh5BG020300 Rh5BG529600 Rh5CG019100 Rh5CG019400 Rh5CG554100 Rh5DG018300 Rh5DG542200
rosa_wichuraiana	Rw5G046900 Rw5G046910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1453
AatII	GACGTC	1 cut(s)	762
Acc16I	TGCGCA	1 cut(s)	1719
Acc36I	ACCTGC	2 cut(s)	1469, 1968
AccB1I	GGYRCC	1 cut(s)	1167
AccB7I	CCANNNNNTGG	2 cut(s)	922, 1522
AccBSI	CCGCTC	1 cut(s)	1867
AccII	CGCG	1 cut(s)	902
AciI	CCGC	7 cut(s)	28, 370, 569, 1576, 1600, 1867, 1944
AclWI	GGATC	5 cut(s)	189, 1030, 1277, 1810, 1871
AcsI	RAATTY	4 cut(s)	717, 893, 1083, 1633
AcuI	CTGAAG	6 cut(s)	71, 356, 441, 1338, 1797, 2142
AcyI	GRCGYC	1 cut(s)	759
AdeI	CACNNNGTG	1 cut(s)	1017
AfaI	GTAC	2 cut(s)	140, 1653
AfeI	AGCGCT	2 cut(s)	632, 1310
AfiI	CCNNNNNNNGG	6 cut(s)	806, 922, 1522, 1746, 1767, 1825
AflII	CTTAAG	1 cut(s)	842
AgsI	TTSAA	8 cut(s)	676, 992, 1070, 1238, 1276, 1665, 1682, 1975
AjiI	CACGTC	1 cut(s)	413
AjnI	CCWGG	3 cut(s)	1510, 1626, 1824
AjuI	GAANNNNNNNTTGG	2 cut(s)	984, 1016
AleI	CACNNNNGTG	1 cut(s)	96
AluBI	AGCT	8 cut(s)	841, 884, 1175, 1352, 1489, 1504, 1528, 1693
AluI	AGCT	8 cut(s)	841, 884, 1175, 1352, 1489, 1504, 1528, 1693
Alw26I	GTCTC	4 cut(s)	962, 1397, 1403, 1592
AlwI	GGATC	5 cut(s)	189, 1030, 1277, 1810, 1871
AlwNI	CAGNNNCTG	1 cut(s)	2120
Ama87I	CYCGRG	1 cut(s)	585
Aor51HI	AGCGCT	2 cut(s)	632, 1310
AoxI	GGCC	2 cut(s)	582, 1513
ApeKI	GCWGC	4 cut(s)	689, 961, 1349, 2012
ApoI	RAATTY	4 cut(s)	717, 893, 1083, 1633
ArsI	GACNNNNNNTTYG	2 cut(s)	2054, 2086
AspLEI	GCGC	5 cut(s)	429, 633, 904, 1311, 1720
AspS9I	GGNCC	1 cut(s)	583
AsuHPI	GGTGA	7 cut(s)	218, 302, 536, 821, 1035, 1373, 1664
AsuII	TTCGAA	1 cut(s)	1429
AvaI	CYCGRG	1 cut(s)	585
AxyI	CCTNAGG	1 cut(s)	801
BaeGI	GKGCMC	1 cut(s)	1170
BanI	GGYRCC	1 cut(s)	1167
BanII	GRGCYC	1 cut(s)	1056
BarI	GAAGNNNNNNTAC	2 cut(s)	736, 768
BbsI	GAAGAC	2 cut(s)	228, 1215
BbvI	GCAGC	4 cut(s)	676, 948, 1361, 2024
BccI	CCATC	6 cut(s)	377, 479, 515, 977, 1352, 1516
BceAI	ACGGC	1 cut(s)	104
BciT130I	CCWGG	3 cut(s)	1512, 1628, 1826
BciVI	GTATCC	1 cut(s)	1859
BclI	TGATCA	1 cut(s)	1611
BcoDI	GTCTC	4 cut(s)	962, 1397, 1403, 1592
BfaI	CTAG	2 cut(s)	881, 2076
BfoI	RGCGCY	2 cut(s)	634, 1312
BfrI	CTTAAG	1 cut(s)	842
BfuAI	ACCTGC	2 cut(s)	1469, 1968
BfuI	GTATCC	1 cut(s)	1859
BglII	AGATCT	1 cut(s)	15
BisI	GCNGC	5 cut(s)	690, 962, 1350, 1945, 2013
BlpI	GCTNAGC	1 cut(s)	1756
BlsI	GCNGC	5 cut(s)	691, 963, 1351, 1946, 2014
Bme1390I	CCNGG	3 cut(s)	1512, 1628, 1826
BmeT110I	CYCGRG	1 cut(s)	585
BmgBI	CACGTC	1 cut(s)	413
BmgT120I	GGNCC	1 cut(s)	583
BmiI	GGNNCC	2 cut(s)	1055, 1169
BmrFI	CCNGG	3 cut(s)	1512, 1628, 1826
BmsI	GCATC	6 cut(s)	634, 1071, 1336, 1726, 1849, 1956
BpiI	GAAGAC	2 cut(s)	228, 1215
BpmI	CTGGAG	2 cut(s)	40, 986
Bpu1102I	GCTNAGC	1 cut(s)	1756
Bpu14I	TTCGAA	1 cut(s)	1429
BpuEI	CTTGAG	1 cut(s)	1526
Bsa29I	ATCGAT	1 cut(s)	978
BsaAI	YACGTR	1 cut(s)	1697
BsaBI	GATNNNNATC	2 cut(s)	14, 180
BsaHI	GRCGYC	1 cut(s)	759
BsaI	GGTCTC	1 cut(s)	1592
BsaJI	CCNNGG	2 cut(s)	1057, 1745
Bsc4I	CCNNNNNNNGG	6 cut(s)	806, 922, 1522, 1746, 1767, 1825
Bse118I	RCCGGY	1 cut(s)	1674
Bse1I	ACTGG	4 cut(s)	38, 168, 1213, 1458
Bse21I	CCTNAGG	1 cut(s)	801
Bse3DI	GCAATG	2 cut(s)	1750, 1890
Bse8I	GATNNNNATC	2 cut(s)	14, 180
BseBI	CCWGG	3 cut(s)	1512, 1628, 1826
BseCI	ATCGAT	1 cut(s)	978
BseDI	CCNNGG	2 cut(s)	1057, 1745
BseGI	GGATG	4 cut(s)	388, 439, 1372, 1928
BseJI	GATNNNNATC	2 cut(s)	14, 180
BseLI	CCNNNNNNNGG	6 cut(s)	806, 922, 1522, 1746, 1767, 1825
BseMI	GCAATG	2 cut(s)	1750, 1890
BseMII	CTCAG	3 cut(s)	414, 792, 2079
BseNI	ACTGG	4 cut(s)	38, 168, 1213, 1458
BseRI	GAGGAG	2 cut(s)	1256, 1397
BseSI	GKGCMC	1 cut(s)	1170
BseXI	GCAGC	4 cut(s)	676, 948, 1361, 2024
BseYI	CCCAGC	1 cut(s)	1171
Bsh1236I	CGCG	1 cut(s)	902
BshFI	GGCC	2 cut(s)	584, 1515
BshNI	GGYRCC	1 cut(s)	1167
BshVI	ATCGAT	1 cut(s)	978
BsiHKCI	CYCGRG	1 cut(s)	585
BsiSI	CCGG	1 cut(s)	1675
BslFI	GGGAC	3 cut(s)	313, 413, 1608
BslI	CCNNNNNNNGG	6 cut(s)	806, 922, 1522, 1746, 1767, 1825
BsmAI	GTCTC	4 cut(s)	962, 1397, 1403, 1592
BsmBI	CGTCTC	2 cut(s)	1397, 1403
BsmFI	GGGAC	3 cut(s)	313, 413, 1608
BsmI	GAATGC	1 cut(s)	406
BsnI	GGCC	2 cut(s)	584, 1515
Bso31I	GGTCTC	1 cut(s)	1592
BsoBI	CYCGRG	1 cut(s)	585
Bsp119I	TTCGAA	1 cut(s)	1429
Bsp1286I	GDGCHC	2 cut(s)	1056, 1170
Bsp1407I	TGTACA	1 cut(s)	1651
Bsp143I	GATC	8 cut(s)	15, 181, 1022, 1125, 1282, 1611, 1815, 1876
Bsp1720I	GCTNAGC	1 cut(s)	1756
BspACI	CCGC	7 cut(s)	28, 370, 569, 1576, 1600, 1867, 1944
BspANI	GGCC	2 cut(s)	584, 1515
BspCNI	CTCAG	3 cut(s)	415, 793, 2078
BspDI	ATCGAT	1 cut(s)	978
BspFNI	CGCG	1 cut(s)	902
BspHI	TCATGA	3 cut(s)	928, 1090, 1222
BspLI	GGNNCC	2 cut(s)	1055, 1169
BspMI	ACCTGC	2 cut(s)	1469, 1968
BspPI	GGATC	5 cut(s)	189, 1030, 1277, 1810, 1871
BspQI	GCTCTTC	1 cut(s)	438
BspT104I	TTCGAA	1 cut(s)	1429
BspT107I	GGYRCC	1 cut(s)	1167
BspTI	CTTAAG	1 cut(s)	842
BspTNI	GGTCTC	1 cut(s)	1592
BsrBI	CCGCTC	1 cut(s)	1867
BsrDI	GCAATG	2 cut(s)	1750, 1890
BsrFI	RCCGGY	1 cut(s)	1674
BsrGI	TGTACA	1 cut(s)	1651
BsrI	ACTGG	4 cut(s)	38, 168, 1213, 1458
BssAI	RCCGGY	1 cut(s)	1674
BssECI	CCNNGG	2 cut(s)	1057, 1745
BssMI	GATC	8 cut(s)	15, 181, 1022, 1125, 1282, 1611, 1815, 1876
BssNI	GRCGYC	1 cut(s)	759
BssT1I	CCWWGG	1 cut(s)	1057
Bst2UI	CCWGG	3 cut(s)	1512, 1628, 1826
Bst4CI	ACNGT	7 cut(s)	95, 143, 958, 1659, 1770, 1954, 2036
Bst6I	CTCTTC	6 cut(s)	124, 332, 438, 739, 1239, 1773
BstACI	GRCGYC	1 cut(s)	759
BstAFI	CTTAAG	1 cut(s)	842
BstAUI	TGTACA	1 cut(s)	1651
BstBAI	YACGTR	1 cut(s)	1697
BstBI	TTCGAA	1 cut(s)	1429
BstC8I	GCNNGC	1 cut(s)	769
BstDEI	CTNAG	5 cut(s)	318, 423, 801, 1756, 2065
BstDSI	CCRYGG	1 cut(s)	1745
BstENI	CCTNNNNNAGG	1 cut(s)	1823
BstF5I	GGATG	4 cut(s)	388, 439, 1372, 1928
BstFNI	CGCG	1 cut(s)	902
BstH2I	RGCGCY	2 cut(s)	634, 1312
BstHHI	GCGC	5 cut(s)	429, 633, 904, 1311, 1720
BstKTI	GATC	8 cut(s)	18, 184, 1025, 1128, 1285, 1614, 1818, 1879
BstMAI	GTCTC	4 cut(s)	962, 1397, 1403, 1592
BstMBI	GATC	8 cut(s)	15, 181, 1022, 1125, 1282, 1611, 1815, 1876
BstMWI	GCNNNNNNNGC	5 cut(s)	63, 499, 639, 958, 1864
BstNI	CCWGG	3 cut(s)	1512, 1628, 1826
BstNSI	RCATGY	2 cut(s)	642, 1984
BstSCI	CCNGG	3 cut(s)	1510, 1626, 1824
BstSLI	GKGCMC	1 cut(s)	1170
BstSNI	TACGTA	1 cut(s)	1697
BstUI	CGCG	1 cut(s)	902
BstV1I	GCAGC	4 cut(s)	676, 948, 1361, 2024
BstV2I	GAAGAC	2 cut(s)	228, 1215
BstX2I	RGATCY	2 cut(s)	15, 1815
BstYI	RGATCY	2 cut(s)	15, 1815
Bsu15I	ATCGAT	1 cut(s)	978
Bsu36I	CCTNAGG	1 cut(s)	801
BsuI	GTATCC	1 cut(s)	1859
BsuRI	GGCC	2 cut(s)	584, 1515
BsuTUI	ATCGAT	1 cut(s)	978
BtgI	CCRYGG	1 cut(s)	1745
BtgZI	GCGATG	1 cut(s)	657
BtrI	CACGTC	1 cut(s)	413
BtsCI	GGATG	4 cut(s)	388, 439, 1372, 1928
BtsI	GCAGTG	1 cut(s)	684
BtsIMutI	CAGTG	5 cut(s)	684, 954, 1124, 1465, 1950
BveI	ACCTGC	2 cut(s)	1469, 1968
Cac8I	GCNNGC	1 cut(s)	769
CaiI	CAGNNNCTG	1 cut(s)	2120
CciI	TCATGA	3 cut(s)	928, 1090, 1222
CfoI	GCGC	5 cut(s)	429, 633, 904, 1311, 1720
Cfr10I	RCCGGY	1 cut(s)	1674
Cfr13I	GGNCC	1 cut(s)	583
ClaI	ATCGAT	1 cut(s)	978
CseI	GACGC	2 cut(s)	2004, 2136
Csp6I	GTAC	2 cut(s)	139, 1652
CviAII	CATG	7 cut(s)	275, 639, 929, 1091, 1223, 1609, 1981
CviQI	GTAC	2 cut(s)	139, 1652
DdeI	CTNAG	5 cut(s)	318, 423, 801, 1756, 2065
DpnI	GATC	8 cut(s)	17, 183, 1024, 1127, 1284, 1613, 1817, 1878
DpnII	GATC	8 cut(s)	15, 181, 1022, 1125, 1282, 1611, 1815, 1876
DraIII	CACNNNGTG	1 cut(s)	1017
DrdI	GACNNNNNNGTC	1 cut(s)	1453
DseDI	GACNNNNNNGTC	1 cut(s)	1453
Eam1104I	CTCTTC	6 cut(s)	124, 332, 438, 739, 1239, 1773
EarI	CTCTTC	6 cut(s)	124, 332, 438, 739, 1239, 1773
EciI	GGCGGA	1 cut(s)	558
Eco105I	TACGTA	1 cut(s)	1697
Eco130I	CCWWGG	1 cut(s)	1057
Eco24I	GRGCYC	1 cut(s)	1056
Eco31I	GGTCTC	1 cut(s)	1592
Eco47III	AGCGCT	2 cut(s)	632, 1310
Eco57I	CTGAAG	6 cut(s)	71, 356, 441, 1338, 1797, 2142
Eco81I	CCTNAGG	1 cut(s)	801
Eco88I	CYCGRG	1 cut(s)	585
EcoNI	CCTNNNNNAGG	1 cut(s)	1823
EcoRI	GAATTC	1 cut(s)	1083
EcoRII	CCWGG	3 cut(s)	1510, 1626, 1824
EcoT14I	CCWWGG	1 cut(s)	1057
EcoT38I	GRGCYC	1 cut(s)	1056
ErhI	CCWWGG	1 cut(s)	1057
Esp3I	CGTCTC	2 cut(s)	1397, 1403
FaeI	CATG	7 cut(s)	278, 642, 932, 1094, 1226, 1612, 1984
FaqI	GGGAC	3 cut(s)	313, 413, 1608
FatI	CATG	7 cut(s)	274, 638, 928, 1090, 1222, 1608, 1980
FauI	CCCGC	1 cut(s)	363
FbaI	TGATCA	1 cut(s)	1611
Fnu4HI	GCNGC	5 cut(s)	690, 962, 1350, 1945, 2013
FokI	GGATG	4 cut(s)	395, 446, 1379, 1915
FriOI	GRGCYC	1 cut(s)	1056
Fsp4HI	GCNGC	5 cut(s)	690, 962, 1350, 1945, 2013
FspBI	CTAG	2 cut(s)	881, 2076
FspI	TGCGCA	1 cut(s)	1719
GlaI	GCGC	5 cut(s)	428, 632, 903, 1310, 1719
GluI	GCNGC	5 cut(s)	690, 962, 1350, 1945, 2013
GsaI	CCCAGC	1 cut(s)	1175
GsuI	CTGGAG	2 cut(s)	40, 986
HaeII	RGCGCY	2 cut(s)	634, 1312
HaeIII	GGCC	2 cut(s)	584, 1515
HapII	CCGG	1 cut(s)	1675
HgaI	GACGC	2 cut(s)	2004, 2136
HhaI	GCGC	5 cut(s)	429, 633, 904, 1311, 1720
Hin1I	GRCGYC	1 cut(s)	759
Hin1II	CATG	7 cut(s)	278, 642, 932, 1094, 1226, 1612, 1984
Hin6I	GCGC	5 cut(s)	427, 631, 902, 1309, 1718
HinP1I	GCGC	5 cut(s)	427, 631, 902, 1309, 1718
HincII	GTYRAC	5 cut(s)	787, 913, 1218, 1773, 1872
HindII	GTYRAC	5 cut(s)	787, 913, 1218, 1773, 1872
HindIII	AAGCTT	2 cut(s)	1487, 1502
HpaI	GTTAAC	3 cut(s)	787, 1218, 1773
HpaII	CCGG	1 cut(s)	1675
HphI	GGTGA	7 cut(s)	218, 302, 536, 821, 1035, 1373, 1664
Hpy166II	GTNNAC	8 cut(s)	359, 787, 812, 913, 1218, 1773, 1872, 1957
Hpy8I	GTNNAC	8 cut(s)	359, 787, 812, 913, 1218, 1773, 1872, 1957
HpyAV	CCTTC	5 cut(s)	1088, 1124, 1425, 1751, 2117
HpyCH4III	ACNGT	7 cut(s)	95, 143, 958, 1659, 1770, 1954, 2036
HpyCH4IV	ACGT	4 cut(s)	412, 759, 1696, 2140
HpyCH4V	TGCA	9 cut(s)	692, 725, 1033, 1142, 1349, 1554, 1608, 1883, 1999
HpyF10VI	GCNNNNNNNGC	5 cut(s)	63, 499, 639, 958, 1864
HpyF3I	CTNAG	5 cut(s)	318, 423, 801, 1756, 2065
HpySE526I	ACGT	4 cut(s)	412, 759, 1696, 2140
Hsp92I	GRCGYC	1 cut(s)	759
Hsp92II	CATG	7 cut(s)	278, 642, 932, 1094, 1226, 1612, 1984
HspAI	GCGC	5 cut(s)	427, 631, 902, 1309, 1718
Ksp22I	TGATCA	1 cut(s)	1611
KspAI	GTTAAC	3 cut(s)	787, 1218, 1773
Kzo9I	GATC	8 cut(s)	15, 181, 1022, 1125, 1282, 1611, 1815, 1876
LguI	GCTCTTC	1 cut(s)	438
LmnI	GCTCC	3 cut(s)	889, 1059, 1525
Lsp1109I	GCAGC	4 cut(s)	676, 948, 1361, 2024
LweI	GCATC	6 cut(s)	634, 1071, 1336, 1726, 1849, 1956
MaeI	CTAG	2 cut(s)	881, 2076
MaeII	ACGT	4 cut(s)	412, 759, 1696, 2140
MaeIII	GTNAC	3 cut(s)	413, 682, 1009
MalI	GATC	8 cut(s)	17, 183, 1024, 1127, 1284, 1613, 1817, 1878
MbiI	CCGCTC	1 cut(s)	1867
MboI	GATC	8 cut(s)	15, 181, 1022, 1125, 1282, 1611, 1815, 1876
MflI	RGATCY	2 cut(s)	15, 1815
MhlI	GDGCHC	2 cut(s)	1056, 1170
MlyI	GAGTC	4 cut(s)	173, 964, 2051, 2093
MmeI	TCCRAC	1 cut(s)	2055
MslI	CAYNNNNRTG	3 cut(s)	96, 279, 1952
MspA1I	CMGCKG	2 cut(s)	1175, 1600
MspCI	CTTAAG	1 cut(s)	842
MspI	CCGG	1 cut(s)	1675
MspR9I	CCNGG	3 cut(s)	1512, 1628, 1826
Mva1269I	GAATGC	1 cut(s)	406
MvaI	CCWGG	3 cut(s)	1512, 1628, 1826
MvnI	CGCG	1 cut(s)	902
MwoI	GCNNNNNNNGC	5 cut(s)	63, 499, 639, 958, 1864
NdeII	GATC	8 cut(s)	15, 181, 1022, 1125, 1282, 1611, 1815, 1876
NlaIII	CATG	7 cut(s)	278, 642, 932, 1094, 1226, 1612, 1984
NlaIV	GGNNCC	2 cut(s)	1055, 1169
NmuCI	GTSAC	3 cut(s)	413, 682, 1009
NsbI	TGCGCA	1 cut(s)	1719
NspI	RCATGY	2 cut(s)	642, 1984
NspV	TTCGAA	1 cut(s)	1429
OliI	CACNNNNGTG	1 cut(s)	96
PagI	TCATGA	3 cut(s)	928, 1090, 1222
PciSI	GCTCTTC	1 cut(s)	438
PctI	GAATGC	1 cut(s)	406
PflMI	CCANNNNNTGG	2 cut(s)	922, 1522
PfoI	TCCNGGA	1 cut(s)	1824
PkrI	GCNGC	5 cut(s)	691, 963, 1351, 1946, 2014
PleI	GAGTC	4 cut(s)	172, 964, 2051, 2092
PpsI	GAGTC	4 cut(s)	172, 964, 2051, 2092
Ppu21I	YACGTR	1 cut(s)	1697
Psp6I	CCWGG	3 cut(s)	1510, 1626, 1824
PspFI	CCCAGC	1 cut(s)	1171
PspGI	CCWGG	3 cut(s)	1510, 1626, 1824
PspN4I	GGNNCC	2 cut(s)	1055, 1169
PspPI	GGNCC	1 cut(s)	583
PstNI	CAGNNNCTG	1 cut(s)	2120
PsuI	RGATCY	2 cut(s)	15, 1815
PvuII	CAGCTG	1 cut(s)	1175
RsaI	GTAC	2 cut(s)	140, 1653
RsaNI	GTAC	2 cut(s)	139, 1652
RseI	CAYNNNNRTG	3 cut(s)	96, 279, 1952
SapI	GCTCTTC	1 cut(s)	438
SatI	GCNGC	5 cut(s)	690, 962, 1350, 1945, 2013
Sau3AI	GATC	8 cut(s)	15, 181, 1022, 1125, 1282, 1611, 1815, 1876
Sau96I	GGNCC	1 cut(s)	583
SchI	GAGTC	4 cut(s)	173, 964, 2051, 2093
ScrFI	CCNGG	3 cut(s)	1512, 1628, 1826
SduI	GDGCHC	2 cut(s)	1056, 1170
SfaNI	GCATC	6 cut(s)	634, 1071, 1336, 1726, 1849, 1956
SfuI	TTCGAA	1 cut(s)	1429
SmiMI	CAYNNNNRTG	3 cut(s)	96, 279, 1952
SmlI	CTYRAG	2 cut(s)	842, 1505
SmoI	CTYRAG	2 cut(s)	842, 1505
SnaBI	TACGTA	1 cut(s)	1697
SsiI	CCGC	7 cut(s)	28, 370, 569, 1576, 1600, 1867, 1944
SspMI	CTAG	2 cut(s)	881, 2076
StyD4I	CCNGG	3 cut(s)	1510, 1626, 1824
StyI	CCWWGG	1 cut(s)	1057
TaaI	ACNGT	7 cut(s)	95, 143, 958, 1659, 1770, 1954, 2036
TaiI	ACGT	4 cut(s)	415, 762, 1699, 2143
TaqI	TCGA	7 cut(s)	104, 184, 603, 978, 1128, 1429, 2060
TatI	WGTACW	1 cut(s)	1651
TauI	GCSGC	1 cut(s)	1947
TscAI	CASTG	5 cut(s)	691, 961, 1124, 1465, 1957
TseFI	GTSAC	3 cut(s)	413, 682, 1009
TseI	GCWGC	4 cut(s)	689, 961, 1349, 2012
Tsp45I	GTSAC	3 cut(s)	413, 682, 1009
TspGWI	ACGGA	4 cut(s)	478, 1421, 1734, 1841
TspRI	CASTG	5 cut(s)	691, 961, 1124, 1465, 1957
Van91I	CCANNNNNTGG	2 cut(s)	922, 1522
Vha464I	CTTAAG	1 cut(s)	842
XagI	CCTNNNNNAGG	1 cut(s)	1823
XapI	RAATTY	4 cut(s)	717, 893, 1083, 1633
XceI	RCATGY	2 cut(s)	642, 1984
XcmI	CCANNNNNNNNNTGG	1 cut(s)	518
XspI	CTAG	2 cut(s)	881, 2076
ZraI	GACGTC	1 cut(s)	760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.