Prupe.6G037500_v2.0.a1

Belongs to the helicase family. RecQ subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0003692
Physical Location & Seq
Reverse (-)
2828904 .. 2838727
9824 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G037500.1

Sequence Viewer

Length: 2757 bp
ATGATAAAAATGCAGTCCATGCAGGCCGTTCTCAAGCAATACTTTGGGTTTTCTTCATTTCGGCCATACCAAAAGGACGTGATAGATAAAATCATAGAGGGAAACGACTCATTGATTGTCATGGCCACTGGAAGCGGCAAGTCCTTGTGCTATCAAGTGCCTCCTTTGGTTGTTGGAAAGACTGGTGTGGTTGTGAGCCCTCTTATATCCTTAATGCAGGATCAGGTAATGTCTTTGAAACAACGAGGAATCAGAGCTGAGTTTATGGGAAGTAGTCAAACAGATTCCACTGTCCAGAACAGAGCTGAAAGTGGTCAATTTGATATTTTGTACATGACCCCAGAAAAGGCATGTTTGATTCCTGCCAGTTTCTGGTCAAAATTGCTTAGTGTTGGAATCTGTTTGTTTGCTGTTGATGAAGCACATTGCATATCGGAGTGGGGCCATGATTTCAGGGTGGAATACAAGAAATTAGACAAGTTACGTGGCATTCTTGTTGATGTTCCATTTATTGCCTTGACTGCGACTGCTACTGAAAAGGTTCGAACGGACATTGTTAATTCCTTGAAGATGCAAAACCCATACGTTACCATAGGCTCATTTGATCGTCCAAATCTGTTTTATGGTGTCAAGTCATTCAATCGTGGTCAATCATTTGTTCATGAGCTAGTGCAAGAAGTTTCAAAATTTGTACGCAGAGATGGTTCAACTATCATTTACTGCACAACAATTAAAGATGTTGAGCAGGTATTCAAGTCACTCAAGGAGCTAGGTATTAAGGTTGGAACCTATCATGGTCAAATGGACAGTAAGGCTCGTGCAGAGTCCCATAGATTATTTATAAGAGATGAATTAGATGTCATGGTTGCTACAATTGCTTTTGGCATGGGTATTGATAAGCCAAACATAAGGCAAGTGATACATTATGGGTGCCCAAAGAGTTTGGAGTCCTATTACCAGGAAAGTGGACGCTGCGGCAGAGATGGTGTGGCGTCTGTTTGCTGGCTTTATTACACTAGAAGTGACTTTGCAAAATCTGACTTTTATGTTGGAGAGTTACAAACAGAAAGTCAACGTAGAGCTGTCGTTGAGTCATTGATGGCAGCACAACAGTATTGTTTACTGACAACTTGCCGAAGGAAGTTCTTGCTTGGTCACTTTGGGGAGAAAGTTTCAGCTGATAAATGTGGCACTTGTGATAACTGCATTTCCTCAAAGAGGGAGCGGGACATGTCTAGAGAAGCATTTCTTCTAATGGCCTGCATTCAATCATGTGGGAGTAAATGGGGTCTCAATATGCCTGTAGACATTCTTCGTGGCTCTCGAGCAAAAAAAATTATTGATCCCCAATATGACAAGCTTCCACTACATGGACTTGGGAAGGACTATTCTTCAAATTGGTGGAAAGCACTTGGTTACCAATTAATTTCATCTGGTTATTTGATGGAAACAGTAAATGACATATACAGAACTGTAAGTGTTAGTCCAAAAGGGTACCAATTTCTTAGTTCTGCTGGGCCTGATCATCAAGCACCCCTAATCTTGCCAGTGACCAGTGAAATGGTAGATGATGAGGACAATAAACATGCCTCGGGTGAAGTTGGAGAAATTAAAAGTTTGGCTACTGTGGAATGTGAAGGATTTTCAGAGGCTGAGAAACAACTCTACCACCTGCTTCTAGAAGAGAGAAGGAAGCTTGCAAGAGCCATTGGAACTGCACCATATGCTATTTGTGGTGATCAAACTATCAAAAAAATTGCTTTAACAAGACCATCTACCAAAGCAAGGTTGGCAAACATTGATGGTGTCAATCAGCACCTTGTAGTGGCACATGGAAACAATTTTCTGCGTATAATCCAGGATCTATCACAAGGACTAAATCTTACGTTGGATGGAGAGGCAACTGTACAAACTGCTTTTACAAGAAAAGTCTATCCAGTATCCAACCAACCAAAAAAGTTAACGCCAGCAAAGTTTGAAGCTTGGAAGATGTGGCATGAAGAGGGTCTCTCAATTCGGAAAATTGCTAACTTCCCTGGTAGACCAGCTCCTATTAAAGAGCTGACTGTTCATGAATATCTGATGGACGCTGCTCAAGAAGGATGTGAAATTGATTGGATCAGATTATGTGATGAGGTTGGGCTGACGCGTAAAGTTTTCTCAGATATTCAGTGTGCCATTTCAAAGGTTGGCTCTAGTGAAAAGTTGAAGCCTATCAAGGAAGAATTACCAGAAGATATAAGTTATGGACACATCAAGACTTGCCTGGCAATGCAAAAGTATGGCATATCTCTGGACGTGATTCCATCTAACCTCCACAATGCACAAAAAGCTGGTCAACTTTCGAACAAGGAAACAGAATCGTCACCATGTTCTACTCGTACATCCCCCATTGAAGGACCTTGTGAAGCTGAAACCTTGGTCCAAAACTCAGTTGCAACCTTGGGTGAAAATGAAGAAACTGCTTCTGTTCCCTTAACCTGGGGACAAACAGTGAAGCTACCCAAAGTACATTTTGAGGATGCACTCTCAAAGAAACGCCAAAAACTAAGTAGTCCAGATGACGGAAATTCTATTGCATTGAAGGCAACAGAGAGTTCCTTATTCAATTGGCTTAAGAACAAAGATGGGGTTACTCTCGCAGAGATTTTGGAGCACTTCAATGGATCTGAAGAGAAATCTGTCATTGATCTACTCAGTTGTCTTGAAGGTGACTTTCTGATATATAGAAAGAACAACATGTATATGATCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000217 GO:0000287 GO:0000400 GO:0000403 GO:0000405 GO:0000723 GO:0000724 GO:0000725 GO:0000731 GO:0000781 GO:0001302 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003682 GO:0003684 GO:0003824 GO:0004003 GO:0004386 GO:0004518 GO:0004527 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005694 GO:0005730 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006284 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0006996 GO:0007154 GO:0007275 GO:0007568 GO:0007569 GO:0008026 GO:0008094 GO:0008104 GO:0008150 GO:0008152 GO:0008408 GO:0009058 GO:0009059 GO:0009267 GO:0009314 GO:0009378 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009893 GO:0009987 GO:0009991 GO:0010212 GO:0010225 GO:0010259 GO:0010332 GO:0010604 GO:0010941 GO:0015630 GO:0016043 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030145 GO:0031297 GO:0031323 GO:0031325 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032200 GO:0032356 GO:0032357 GO:0032392 GO:0032501 GO:0032502 GO:0032508 GO:0033036 GO:0033365 GO:0033554 GO:0034504 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0040009 GO:0042592 GO:0042594 GO:0042623 GO:0042802 GO:0042803 GO:0042981 GO:0042995 GO:0043005 GO:0043067 GO:0043085 GO:0043138 GO:0043140 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0044806 GO:0044877 GO:0045005 GO:0045911 GO:0045935 GO:0046483 GO:0046872 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051179 GO:0051276 GO:0051336 GO:0051345 GO:0051641 GO:0051716 GO:0051880 GO:0060249 GO:0060255 GO:0060542 GO:0061749 GO:0061820 GO:0061821 GO:0062037 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070035 GO:0070336 GO:0070337 GO:0070727 GO:0071103 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071496 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0090305 GO:0090657 GO:0097159 GO:0097458 GO:0098530 GO:0098687 GO:0104004 GO:0120025 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902570 GO:1905773
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DEAD HRDC HTH_40 Helicase_C RQC RecQ_Zn_bind

Protein Analysis

919

Amino Acids

102.56

Weight (kDa)

7.22

Isoelectric Point (pI)

39.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 842
AarI CACCTGC 1 cut(s) 1680
Acc36I ACCTGC 2 cut(s) 736, 1680
Acc65I GGTACC 1 cut(s) 1494
AccB1I GGYRCC 2 cut(s) 930, 1494
AccB7I CCANNNNNTGG 2 cut(s) 372, 1370
AccBSI CCGCTC 1 cut(s) 1225
AccI GTMKAC 2 cut(s) 1305, 2041
AccII CGCG 1 cut(s) 2149
AciI CCGC 3 cut(s) 135, 975, 1225
AclWI GGATC 5 cut(s) 228, 1337, 1869, 2126, 2674
AcoI YGGCCR 2 cut(s) 62, 123
AcsI RAATTY 2 cut(s) 686, 2569
AcuI CTGAAG 1 cut(s) 2691
AcyI GRCGYC 1 cut(s) 992
AfaI GTAC 6 cut(s) 332, 693, 1496, 1908, 2383, 2511
AfiI CCNNNNNNNGG 9 cut(s) 346, 372, 1218, 1370, 1785, 1825, 2396, 2481, 2564
AflII CTTAAG 1 cut(s) 2615
AflIII ACRYGT 3 cut(s) 1230, 2147, 2739
AjiI CACGTC 2 cut(s) 79, 2299
AjnI CCWGG 5 cut(s) 957, 1857, 2035, 2265, 2480
Alw21I GWGCWC 1 cut(s) 2658
Alw26I GTCTC 2 cut(s) 1295, 2012
AlwI GGATC 5 cut(s) 228, 1337, 1869, 2126, 2674
AlwNI CAGNNNCTG 2 cut(s) 372, 1652
Ama87I CYCGRG 2 cut(s) 1323, 1591
AoxI GGCC 6 cut(s) 24, 62, 123, 442, 1257, 1517
ApeKI GCWGC 3 cut(s) 972, 1103, 2090
ApoI RAATTY 2 cut(s) 686, 2569
ArsI GACNNNNNNTTYG 4 cut(s) 1054, 1086, 2320, 2352
AseI ATTAAT 1 cut(s) 1424
Asp700I GAANNNNTTC 2 cut(s) 540, 1245
Asp718I GGTACC 1 cut(s) 1494
AspS9I GGNCC 4 cut(s) 442, 1517, 2399, 2422
AsuHPI GGTGA 5 cut(s) 1607, 1748, 2358, 2459, 2723
AsuII TTCGAA 2 cut(s) 544, 2345
AvaI CYCGRG 2 cut(s) 1323, 1591
AvaII GGWCC 2 cut(s) 2399, 2422
BaeGI GKGCMC 1 cut(s) 935
BalI TGGCCA 1 cut(s) 125
BanI GGYRCC 2 cut(s) 930, 1494
BanII GRGCYC 1 cut(s) 200
BarI GAAGNNNNNNTAC 2 cut(s) 1296, 1328
BauI CACGAG 1 cut(s) 816
Bbv12I GWGCWC 1 cut(s) 2658
BbvI GCAGC 3 cut(s) 959, 1115, 2077
BceAI ACGGC 1 cut(s) 11
BciT130I CCWGG 5 cut(s) 959, 1859, 2037, 2267, 2482
BciVI GTATCC 1 cut(s) 1951
BclI TGATCA 3 cut(s) 1522, 1738, 2748
BcoDI GTCTC 2 cut(s) 1295, 2012
BfaI CTAG 6 cut(s) 668, 770, 1017, 1236, 1679, 2196
BfmI CTRYAG 1 cut(s) 1302
BfrI CTTAAG 1 cut(s) 2615
BfuAI ACCTGC 2 cut(s) 736, 1680
BfuI GTATCC 1 cut(s) 1951
BisI GCNGC 5 cut(s) 136, 973, 976, 1104, 2091
BlsI GCNGC 5 cut(s) 137, 974, 977, 1105, 2092
Bme1390I CCNGG 5 cut(s) 959, 1859, 2037, 2267, 2482
Bme18I GGWCC 2 cut(s) 2399, 2422
BmeT110I CYCGRG 2 cut(s) 1323, 1591
BmgBI CACGTC 2 cut(s) 79, 2299
BmgT120I GGNCC 4 cut(s) 442, 1517, 2399, 2422
BmiI GGNNCC 4 cut(s) 443, 787, 932, 1496
BmrFI CCNGG 5 cut(s) 959, 1859, 2037, 2267, 2482
BmsI GCATC 2 cut(s) 561, 2512
BplI GAGNNNNNCTC 2 cut(s) 1994, 2026
Bpu14I TTCGAA 2 cut(s) 544, 2345
BpuEI CTTGAG 3 cut(s) 17, 746, 2079
BsaAI YACGTR 1 cut(s) 485
BsaHI GRCGYC 1 cut(s) 992
BsaI GGTCTC 2 cut(s) 1295, 2012
BsaJI CCNNGG 5 cut(s) 1590, 2035, 2418, 2442, 2481
Bsc4I CCNNNNNNNGG 9 cut(s) 346, 372, 1218, 1370, 1785, 1825, 2396, 2481, 2564
Bse1I ACTGG 6 cut(s) 133, 187, 366, 1547, 1554, 1937
Bse3DI GCAATG 2 cut(s) 424, 2277
BseBI CCWGG 5 cut(s) 959, 1859, 2037, 2267, 2482
BseDI CCNNGG 5 cut(s) 1590, 2035, 2418, 2442, 2481
BseGI GGATG 4 cut(s) 1897, 2108, 2384, 2527
BseLI CCNNNNNNNGG 9 cut(s) 346, 372, 1218, 1370, 1785, 1825, 2396, 2481, 2564
BseMI GCAATG 2 cut(s) 424, 2277
BseMII CTCAG 5 cut(s) 249, 1644, 2175, 2445, 2710
BseNI ACTGG 6 cut(s) 133, 187, 366, 1547, 1554, 1937
BseSI GKGCMC 1 cut(s) 935
BseXI GCAGC 3 cut(s) 959, 1115, 2077
BseYI CCCAGC 1 cut(s) 1514
BsgI GTGCAG 3 cut(s) 706, 840, 1701
Bsh1236I CGCG 1 cut(s) 2149
BshFI GGCC 6 cut(s) 26, 64, 125, 444, 1259, 1519
BshNI GGYRCC 2 cut(s) 930, 1494
BsiHKAI GWGCWC 1 cut(s) 2658
BsiHKCI CYCGRG 2 cut(s) 1323, 1591
BslFI GGGAC 3 cut(s) 811, 1241, 2499
BslI CCNNNNNNNGG 9 cut(s) 346, 372, 1218, 1370, 1785, 1825, 2396, 2481, 2564
BsmAI GTCTC 2 cut(s) 1295, 2012
BsmFI GGGAC 3 cut(s) 811, 1241, 2499
BsmI GAATGC 2 cut(s) 489, 1263
BsnI GGCC 6 cut(s) 26, 64, 125, 444, 1259, 1519
Bso31I GGTCTC 2 cut(s) 1295, 2012
BsoBI CYCGRG 2 cut(s) 1323, 1591
Bsp119I TTCGAA 2 cut(s) 544, 2345
Bsp1286I GDGCHC 3 cut(s) 200, 935, 2658
Bsp1407I TGTACA 2 cut(s) 330, 1906
BspACI CCGC 3 cut(s) 135, 975, 1225
BspANI GGCC 6 cut(s) 26, 64, 125, 444, 1259, 1519
BspCNI CTCAG 5 cut(s) 250, 1645, 2174, 2444, 2709
BspFNI CGCG 1 cut(s) 2149
BspHI TCATGA 2 cut(s) 661, 2071
BspLI GGNNCC 4 cut(s) 443, 787, 932, 1496
BspMI ACCTGC 2 cut(s) 736, 1680
BspPI GGATC 5 cut(s) 228, 1337, 1869, 2126, 2674
BspT104I TTCGAA 2 cut(s) 544, 2345
BspT107I GGYRCC 2 cut(s) 930, 1494
BspTI CTTAAG 1 cut(s) 2615
BspTNI GGTCTC 2 cut(s) 1295, 2012
BsrBI CCGCTC 1 cut(s) 1225
BsrDI GCAATG 2 cut(s) 424, 2277
BsrGI TGTACA 2 cut(s) 330, 1906
BsrI ACTGG 6 cut(s) 133, 187, 366, 1547, 1554, 1937
BssECI CCNNGG 5 cut(s) 1590, 2035, 2418, 2442, 2481
BssNI GRCGYC 1 cut(s) 992
BssSI CACGAG 1 cut(s) 816
BssT1I CCWWGG 2 cut(s) 2418, 2442
Bst2BI CACGAG 1 cut(s) 816
Bst2UI CCWGG 5 cut(s) 959, 1859, 2037, 2267, 2482
Bst4CI ACNGT 9 cut(s) 292, 809, 1113, 1453, 1474, 1627, 1906, 2068, 2494
Bst6I CTCTTC 3 cut(s) 1677, 1995, 2667
BstACI GRCGYC 1 cut(s) 992
BstAFI CTTAAG 1 cut(s) 2615
BstAPI GCANNNNNTGC 2 cut(s) 19, 1724
BstAUI TGTACA 2 cut(s) 330, 1906
BstBAI YACGTR 1 cut(s) 485
BstBI TTCGAA 2 cut(s) 544, 2345
BstC8I GCNNGC 5 cut(s) 24, 1004, 1261, 1698, 1968
BstDEI CTNAG 8 cut(s) 258, 386, 1505, 1653, 2161, 2431, 2549, 2696
BstEII GGTNACC 1 cut(s) 1415
BstENI CCTNNNNNAGG 1 cut(s) 1216
BstF5I GGATG 4 cut(s) 1897, 2108, 2384, 2527
BstFNI CGCG 1 cut(s) 2149
BstMAI GTCTC 2 cut(s) 1295, 2012
BstMWI GCNNNNNNNGC 7 cut(s) 19, 521, 875, 1724, 1790, 2330, 2585
BstNI CCWGG 5 cut(s) 959, 1859, 2037, 2267, 2482
BstNSI RCATGY 4 cut(s) 354, 1234, 1589, 2743
BstPI GGTNACC 1 cut(s) 1415
BstSCI CCNGG 5 cut(s) 957, 1857, 2035, 2265, 2480
BstSFI CTRYAG 1 cut(s) 1302
BstSLI GKGCMC 1 cut(s) 935
BstUI CGCG 1 cut(s) 2149
BstV1I GCAGC 3 cut(s) 959, 1115, 2077
BstX2I RGATCY 2 cut(s) 1861, 2666
BstXI CCANNNNNNTGG 2 cut(s) 965, 1561
BstYI RGATCY 2 cut(s) 1861, 2666
BsuI GTATCC 1 cut(s) 1951
BsuRI GGCC 6 cut(s) 26, 64, 125, 444, 1259, 1519
BtrI CACGTC 2 cut(s) 79, 2299
BtsCI GGATG 4 cut(s) 1897, 2108, 2384, 2527
BtsIMutI CAGTG 6 cut(s) 126, 288, 1554, 1561, 2177, 2499
BveI ACCTGC 2 cut(s) 736, 1680
Cac8I GCNNGC 5 cut(s) 24, 1004, 1261, 1698, 1968
CaiI CAGNNNCTG 2 cut(s) 372, 1652
CciI TCATGA 2 cut(s) 661, 2071
Cfr13I GGNCC 4 cut(s) 442, 1517, 2399, 2422
CseI GACGC 4 cut(s) 978, 981, 2096, 2155
Csp6I GTAC 6 cut(s) 331, 692, 1495, 1907, 2382, 2510
CspCI CAANNNNNGTGG 2 cut(s) 466, 501
CviQI GTAC 6 cut(s) 331, 692, 1495, 1907, 2382, 2510
DdeI CTNAG 8 cut(s) 258, 386, 1505, 1653, 2161, 2431, 2549, 2696
EaeI YGGCCR 2 cut(s) 62, 123
Eam1104I CTCTTC 3 cut(s) 1677, 1995, 2667
EarI CTCTTC 3 cut(s) 1677, 1995, 2667
Eco130I CCWWGG 2 cut(s) 2418, 2442
Eco24I GRGCYC 1 cut(s) 200
Eco31I GGTCTC 2 cut(s) 1295, 2012
Eco47I GGWCC 2 cut(s) 2399, 2422
Eco57I CTGAAG 1 cut(s) 2691
Eco88I CYCGRG 2 cut(s) 1323, 1591
Eco91I GGTNACC 1 cut(s) 1415
EcoNI CCTNNNNNAGG 1 cut(s) 1216
EcoO109I RGGNCCY 1 cut(s) 2399
EcoO65I GGTNACC 1 cut(s) 1415
EcoRII CCWGG 5 cut(s) 957, 1857, 2035, 2265, 2480
EcoT14I CCWWGG 2 cut(s) 2418, 2442
EcoT38I GRGCYC 1 cut(s) 200
ErhI CCWWGG 2 cut(s) 2418, 2442
FalI AAGNNNNNCTT 4 cut(s) 26, 58, 1233, 1265
FaqI GGGAC 3 cut(s) 811, 1241, 2499
FauI CCCGC 1 cut(s) 1218
FauNDI CATATG 1 cut(s) 1723
FbaI TGATCA 3 cut(s) 1522, 1738, 2748
FblI GTMKAC 2 cut(s) 1305, 2041
Fnu4HI GCNGC 5 cut(s) 136, 973, 976, 1104, 2091
FokI GGATG 4 cut(s) 1904, 2115, 2371, 2534
FriOI GRGCYC 1 cut(s) 200
Fsp4HI GCNGC 5 cut(s) 136, 973, 976, 1104, 2091
FspBI CTAG 6 cut(s) 668, 770, 1017, 1236, 1679, 2196
GluI GCNGC 5 cut(s) 136, 973, 976, 1104, 2091
GsaI CCCAGC 1 cut(s) 1518
HaeIII GGCC 6 cut(s) 26, 64, 125, 444, 1259, 1519
HgaI GACGC 4 cut(s) 978, 981, 2096, 2155
Hin1I GRCGYC 1 cut(s) 992
HincII GTYRAC 3 cut(s) 1073, 1962, 2339
HindII GTYRAC 3 cut(s) 1073, 1962, 2339
HindIII AAGCTT 3 cut(s) 1358, 1694, 1980
HpaI GTTAAC 1 cut(s) 1962
HphI GGTGA 5 cut(s) 1607, 1748, 2358, 2459, 2723
Hpy166II GTNNAC 7 cut(s) 968, 1073, 1121, 1306, 1962, 2042, 2339
Hpy8I GTNNAC 7 cut(s) 968, 1073, 1121, 1306, 1962, 2042, 2339
HpyAV CCTTC 8 cut(s) 1131, 1375, 1631, 1683, 2093, 2390, 2578, 2702
HpyCH4III ACNGT 9 cut(s) 292, 809, 1113, 1453, 1474, 1627, 1906, 2068, 2494
HpyCH4IV ACGT 6 cut(s) 78, 484, 585, 1075, 1886, 2298
HpyF10VI GCNNNNNNNGC 7 cut(s) 19, 521, 875, 1724, 1790, 2330, 2585
HpyF3I CTNAG 8 cut(s) 258, 386, 1505, 1653, 2161, 2431, 2549, 2696
HpySE526I ACGT 6 cut(s) 78, 484, 585, 1075, 1886, 2298
Hsp92I GRCGYC 1 cut(s) 992
KpnI GGTACC 1 cut(s) 1498
Ksp22I TGATCA 3 cut(s) 1522, 1738, 2748
KspAI GTTAAC 1 cut(s) 1962
LmnI GCTCC 4 cut(s) 766, 1222, 2053, 2653
Lsp1109I GCAGC 3 cut(s) 959, 1115, 2077
LweI GCATC 2 cut(s) 561, 2512
MaeI CTAG 6 cut(s) 668, 770, 1017, 1236, 1679, 2196
MaeII ACGT 6 cut(s) 78, 484, 585, 1075, 1886, 2298
MbiI CCGCTC 1 cut(s) 1225
MfeI CAATTG 2 cut(s) 873, 2608
MflI RGATCY 2 cut(s) 1861, 2666
MhlI GDGCHC 3 cut(s) 200, 935, 2658
MlsI TGGCCA 1 cut(s) 125
MluI ACGCGT 1 cut(s) 2147
MluNI TGGCCA 1 cut(s) 125
MlyI GAGTC 4 cut(s) 101, 833, 956, 1100
MmeI TCCRAC 7 cut(s) 154, 373, 763, 1030, 1582, 1869, 1968
Mox20I TGGCCA 1 cut(s) 125
MroXI GAANNNNTTC 2 cut(s) 540, 1245
MscI TGGCCA 1 cut(s) 125
MslI CAYNNNNRTG 2 cut(s) 2661, 2744
Msp20I TGGCCA 1 cut(s) 125
MspA1I CMGCKG 1 cut(s) 1178
MspCI CTTAAG 1 cut(s) 2615
MspR9I CCNGG 5 cut(s) 959, 1859, 2037, 2267, 2482
MunI CAATTG 2 cut(s) 873, 2608
Mva1269I GAATGC 2 cut(s) 489, 1263
MvaI CCWGG 5 cut(s) 959, 1859, 2037, 2267, 2482
MvnI CGCG 1 cut(s) 2149
MwoI GCNNNNNNNGC 7 cut(s) 19, 521, 875, 1724, 1790, 2330, 2585
NdeI CATATG 1 cut(s) 1723
NlaIV GGNNCC 4 cut(s) 443, 787, 932, 1496
NmuCI GTSAC 6 cut(s) 756, 1022, 1154, 1549, 2364, 2711
NspI RCATGY 4 cut(s) 354, 1234, 1589, 2743
NspV TTCGAA 2 cut(s) 544, 2345
PaeR7I CTCGAG 1 cut(s) 1323
PagI TCATGA 2 cut(s) 661, 2071
PaqCI CACCTGC 1 cut(s) 1680
PciI ACATGT 2 cut(s) 1230, 2739
PcsI WCGNNNNNNNCGW 1 cut(s) 1321
PctI GAATGC 2 cut(s) 489, 1263
PdmI GAANNNNTTC 2 cut(s) 540, 1245
PfeI GAWTC 6 cut(s) 249, 284, 358, 396, 2302, 2360
PflMI CCANNNNNTGG 2 cut(s) 372, 1370
PfoI TCCNGGA 1 cut(s) 1857
PkrI GCNGC 5 cut(s) 137, 974, 977, 1105, 2092
PleI GAGTC 4 cut(s) 101, 832, 955, 1099
PpsI GAGTC 4 cut(s) 101, 832, 955, 1099
Ppu21I YACGTR 1 cut(s) 485
PpuMI RGGWCCY 1 cut(s) 2399
PscI ACATGT 2 cut(s) 1230, 2739
PshBI ATTAAT 1 cut(s) 1424
PsiI TTATAA 1 cut(s) 842
Psp5II RGGWCCY 1 cut(s) 2399
Psp6I CCWGG 5 cut(s) 957, 1857, 2035, 2265, 2480
PspEI GGTNACC 1 cut(s) 1415
PspFI CCCAGC 1 cut(s) 1514
PspGI CCWGG 5 cut(s) 957, 1857, 2035, 2265, 2480
PspN4I GGNNCC 4 cut(s) 443, 787, 932, 1496
PspPI GGNCC 4 cut(s) 442, 1517, 2399, 2422
PspPPI RGGWCCY 1 cut(s) 2399
PstNI CAGNNNCTG 2 cut(s) 372, 1652
PsuI RGATCY 2 cut(s) 1861, 2666
PvuII CAGCTG 1 cut(s) 1178
RsaI GTAC 6 cut(s) 332, 693, 1496, 1908, 2383, 2511
RsaNI GTAC 6 cut(s) 331, 692, 1495, 1907, 2382, 2510
RseI CAYNNNNRTG 2 cut(s) 2661, 2744
SatI GCNGC 5 cut(s) 136, 973, 976, 1104, 2091
Sau96I GGNCC 4 cut(s) 442, 1517, 2399, 2422
SchI GAGTC 4 cut(s) 101, 833, 956, 1100
ScrFI CCNGG 5 cut(s) 959, 1859, 2037, 2267, 2482
SduI GDGCHC 3 cut(s) 200, 935, 2658
SfaNI GCATC 2 cut(s) 561, 2512
SfcI CTRYAG 1 cut(s) 1302
Sfr274I CTCGAG 1 cut(s) 1323
SfuI TTCGAA 2 cut(s) 544, 2345
SinI GGWCC 2 cut(s) 2399, 2422
SlaI CTCGAG 1 cut(s) 1323
SmiMI CAYNNNNRTG 2 cut(s) 2661, 2744
SmlI CTYRAG 5 cut(s) 32, 761, 1323, 2094, 2615
SmoI CTYRAG 5 cut(s) 32, 761, 1323, 2094, 2615
SsiI CCGC 3 cut(s) 135, 975, 1225
SspMI CTAG 6 cut(s) 668, 770, 1017, 1236, 1679, 2196
StyD4I CCNGG 5 cut(s) 957, 1857, 2035, 2265, 2480
StyI CCWWGG 2 cut(s) 2418, 2442
TaaI ACNGT 9 cut(s) 292, 809, 1113, 1453, 1474, 1627, 1906, 2068, 2494
TaiI ACGT 6 cut(s) 81, 487, 588, 1078, 1889, 2301
TaqI TCGA 3 cut(s) 544, 1324, 2345
TatI WGTACW 3 cut(s) 330, 1906, 2509
TauI GCSGC 2 cut(s) 138, 978
TfiI GAWTC 6 cut(s) 249, 284, 358, 396, 2302, 2360
TscAI CASTG 6 cut(s) 133, 295, 1554, 1561, 2177, 2499
TseFI GTSAC 6 cut(s) 756, 1022, 1154, 1549, 2364, 2711
TseI GCWGC 3 cut(s) 972, 1103, 2090
Tsp45I GTSAC 6 cut(s) 756, 1022, 1154, 1549, 2364, 2711
TspDTI ATGAA 9 cut(s) 45, 432, 650, 864, 1419, 2013, 2060, 2088, 2469
TspGWI ACGGA 2 cut(s) 563, 2580
TspRI CASTG 6 cut(s) 133, 295, 1554, 1561, 2177, 2499
Van91I CCANNNNNTGG 2 cut(s) 372, 1370
Vha464I CTTAAG 1 cut(s) 2615
VpaK11BI GGWCC 2 cut(s) 2399, 2422
VspI ATTAAT 1 cut(s) 1424
XagI CCTNNNNNAGG 1 cut(s) 1216
XapI RAATTY 2 cut(s) 686, 2569
XbaI TCTAGA 2 cut(s) 1235, 1678
XceI RCATGY 4 cut(s) 354, 1234, 1589, 2743
XcmI CCANNNNNNNNNTGG 1 cut(s) 1786
XhoI CTCGAG 1 cut(s) 1323
XmiI GTMKAC 2 cut(s) 1305, 2041
XmnI GAANNNNTTC 2 cut(s) 540, 1245
XspI CTAG 6 cut(s) 668, 770, 1017, 1236, 1679, 2196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.