Rh5CG529800

Belongs to the helicase family. RecQ subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0003692
Physical Location & Seq
Forward (+)
74086584 .. 74102529
15946 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG529800.1

Sequence Viewer

Length: 2064 bp
ATGTCGTCTATGCAGGCCATTCTCAAGAAATATGGGTTTTCTTCATTTCGGCCATACCAAAAGAAAGTGATTGAGAAAATCATAGCAGGAAGGGACTCTTTGATTGTCATGGCCACTGGAAGTGGCAAGTCTTTGTGCTATCAAGTGCCTCCTTTGGTTGTTGGAAAGACTGGTGTGGTTGTGAGCCCTCTTTTATCCTTGATGCAAGATCAGGTAATGGCTTTGAAACAAAGAGGGATCAGAGCTGAGTATATGGGTACTAGTCAAACTGATAGCACTGTCCAGAGCCGAGCCGAGAGTGGTCAATTTGATATCTTGTACATGACCCCTGAAAAGGCATGTAAGATTCCTGACAGCTTCTGGTCAAAATTACTAAGGGCTGGAATCTGCCTGTTTGCTGTTGATGAAGCACACTGCATATCAGAGTGGGGCCATGATTTCAGGATGGACTACAAGCGATTGGACAAGTTACGTGGCATTCTTGTTGGTGTCCCATTTATTGGCTTAACTGCAACTGCTACTAAAAAGGTTCAAAGGGACATTGTTAATTCCTTGAAGATGAAAAACCCATATTACAGAATAGGCTCCTTTGATCGTGGAAATCTGTTCTATGGTGTCAAGTTATTCAATCGGACTCAATCATTTGTTCATGAGGTAGCTCAAGAAGTTTCCAAATTTGTACGCACAGATGGTTCAACTATAATTTACTGCACGACAATTAAGGACGTTTATCAGGTATTCATTGCACTGAAGGAGGTGGGCATTAAGGCTGGAATCTACCATAGTGAGATGGATAATAAAGCTCGTGCCGAATCCCATAGATTATTTATAAGAGATGAAGTAGATGTCATGGTTGCTACTATTGCTTTCGGCATGGGTATTGATAAGCCAAACATAAGACAAGTAATCCATTATGGCTGCCCGAAGAGTTTGGAGTCTTATTACCAGGAAAGTGGACGATGTGGTAGAGATGGTATGGCTTCTGTCTGCTGGCTCTATTACACAAGAAGCGACCTCACAAAAGCTGACTTTTATGCTGGAGAGTGTCAAACAGAAAGTCGACGAAGAGCTGTTATAAAGTCGTTGAGGGCAGTACAACAATATTGCTTATCAACAACTTGCAGAAGGAAGTTCTTGCTTGGTTACTTTGGGGAAATCTTTCCATCTGATAAATGTGGTAATTGTGATAATTGTATTTCCCCAAAGAAGGAGATGGACATGTCTAGAGAAGCATATCTTCTGATGGCTTGCATTCAATCATGTCGGGGTACATGCGGTCTGAATATGCCTGTAGATATTCTTCGTGGCTCTCGGGCCAAAAAGATTATTGCTGCCGAATATGACAAGCTTCCACTGCATGGACTTGGGAAAGACTATTCTGCAAATTGGTGGAAAACACTTGCTTACCAATTAATCTCTTATGGTTATTTGATGGAGATATACAGAAATGTAAGTGTCAGTCCGAAAGGGGAGCGATTTCTAAGTTCTGCTGGACCTGATCATCAACCGCCTCTAGTGTTGCCAGTGACCAGTGAAATGGTTGATGATGAGGACAATAAAAGTACATCAGGAGAGAAAGAGATGAAAATGTATGGAGTAGAAAGGTTGAATCTTCGGAAGAGTAGAGGGAAACAACAAGATATTGTTAACCTTCTGGGAGCAACCTATTCTGCTGTTCTTTTCCTTGGAGCGGGAAATGCTTCTGCTGTGCAATCTGTGGTTGCGATTGAGAGAACAGTTTTCTACCGAGAAAGAGTAGCAGGAATGTATTCAGAGTTGACTTATGCATTTGCTCAGGTAGCCATTGAGACGATTTATGTTGCTATACAAACCATCATTTATTCCCTTCTTTTATTTACCATGATCGGCTACGAATTTAAAGTTGAGAAATTTTTGTATTTCTACTACTTTATATTCATGTGTTTTACGTACTTCTCAATGTATGGAATGATGGTGGTTGCCCTAACTCCTGGCCATCAAATCGCTGCAATTATCATGGGCTTCTTCATGAGTTTCTGGAATTTGTTCTCCGGTTTCCTCGTCCCCAGACCGTCTTTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000217 GO:0000287 GO:0000400 GO:0000403 GO:0000405 GO:0000723 GO:0000724 GO:0000725 GO:0000731 GO:0000781 GO:0001302 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003682 GO:0003684 GO:0003824 GO:0004003 GO:0004386 GO:0004518 GO:0004527 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005694 GO:0005730 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006284 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0006996 GO:0007154 GO:0007275 GO:0007568 GO:0007569 GO:0008026 GO:0008094 GO:0008104 GO:0008150 GO:0008152 GO:0008408 GO:0009058 GO:0009059 GO:0009267 GO:0009314 GO:0009378 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009893 GO:0009987 GO:0009991 GO:0010212 GO:0010225 GO:0010259 GO:0010332 GO:0010604 GO:0010941 GO:0015630 GO:0016043 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030145 GO:0031297 GO:0031323 GO:0031325 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032200 GO:0032356 GO:0032357 GO:0032392 GO:0032501 GO:0032502 GO:0032508 GO:0033036 GO:0033365 GO:0033554 GO:0034504 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0040009 GO:0042592 GO:0042594 GO:0042623 GO:0042802 GO:0042803 GO:0042981 GO:0042995 GO:0043005 GO:0043067 GO:0043085 GO:0043138 GO:0043140 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0044806 GO:0044877 GO:0045005 GO:0045911 GO:0045935 GO:0046483 GO:0046872 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051179 GO:0051276 GO:0051336 GO:0051345 GO:0051641 GO:0051716 GO:0051880 GO:0060249 GO:0060255 GO:0060542 GO:0061749 GO:0061820 GO:0061821 GO:0062037 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070035 GO:0070336 GO:0070337 GO:0070727 GO:0071103 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071496 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0090305 GO:0090657 GO:0097159 GO:0097458 GO:0098530 GO:0098687 GO:0104004 GO:0120025 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902570 GO:1905773
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DEAD HRDC HTH_40 Helicase_C RQC RecQ_Zn_bind

Protein Analysis

687

Amino Acids

77.77

Weight (kDa)

9.08

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 15 - 172 2.6e-06 Type III restriction enzyme, res subunit
DEAD PF00270 17 - 178 5.9e-25 DEAD/DEAH box helicase
Helicase_C PF00271 227 - 325 2.9e-20 Helicase conserved C-terminal domain
RecQ_Zn_bind PF16124 337 - 398 6.1e-16 RecQ zinc-binding
RQC PF09382 401 - 495 1.7e-20 RQC domain
ABC2_membrane PF01061 544 - 685 2.3e-31 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 830, 1076
AccB7I CCANNNNNTGG 2 cut(s) 500, 1358
AccBSI CCGCTC 1 cut(s) 1691
AccI GTMKAC 1 cut(s) 1060
AciI CCGC 3 cut(s) 1275, 1508, 1691
AclWI GGATC 1 cut(s) 245
AcoI YGGCCR 3 cut(s) 50, 111, 1972
AcsI RAATTY 4 cut(s) 674, 1874, 1889, 2020
AcuI CTGAAG 1 cut(s) 770
AfaI GTAC 7 cut(s) 259, 320, 681, 1095, 1270, 1564, 1931
AfiI CCNNNNNNNGG 5 cut(s) 334, 500, 1207, 1358, 1690
AflIII ACRYGT 1 cut(s) 1218
AgsI TTSAA 7 cut(s) 226, 533, 556, 628, 696, 1256, 1609
AhlI ACTAGT 1 cut(s) 260
AjnI CCWGG 2 cut(s) 945, 1969
AluBI AGCT 7 cut(s) 245, 357, 659, 803, 1025, 1070, 1348
AluI AGCT 7 cut(s) 245, 357, 659, 803, 1025, 1070, 1348
Alw26I GTCTC 1 cut(s) 1802
AlwI GGATC 1 cut(s) 245
AlwNI CAGNNNCTG 1 cut(s) 360
Ama87I CYCGRG 1 cut(s) 1311
AoxI GGCC 6 cut(s) 15, 50, 111, 430, 1314, 1972
ApeKI GCWGC 3 cut(s) 918, 1331, 1985
ApoI RAATTY 4 cut(s) 674, 1874, 1889, 2020
ArsI GACNNNNNNTTYG 2 cut(s) 1042, 1074
AseI ATTAAT 1 cut(s) 1412
Asp700I GAANNNNTTC 4 cut(s) 1158, 1699, 1768, 2024
AspS9I GGNCC 3 cut(s) 430, 1314, 1493
AvaI CYCGRG 1 cut(s) 1311
AvaII GGWCC 1 cut(s) 1493
BalI TGGCCA 2 cut(s) 113, 1974
BanII GRGCYC 1 cut(s) 188
BarI GAAGNNNNNNTAC 2 cut(s) 1284, 1316
BauI CACGAG 1 cut(s) 804
BbvI GCAGC 3 cut(s) 905, 1318, 1972
BciT130I CCWGG 2 cut(s) 947, 1971
BclI TGATCA 1 cut(s) 1498
BcoDI GTCTC 1 cut(s) 1802
BcuI ACTAGT 1 cut(s) 260
BfaI CTAG 3 cut(s) 261, 1224, 1514
BfmI CTRYAG 1 cut(s) 1290
BisI GCNGC 3 cut(s) 919, 1332, 1986
BlsI GCNGC 3 cut(s) 920, 1333, 1987
Bme1390I CCNGG 2 cut(s) 947, 1971
Bme18I GGWCC 1 cut(s) 1493
BmeT110I CYCGRG 1 cut(s) 1311
BmgT120I GGNCC 3 cut(s) 430, 1314, 1493
BmiI GGNNCC 2 cut(s) 431, 586
BmrFI CCNGG 2 cut(s) 947, 1971
BmsI GCATC 1 cut(s) 192
BpmI CTGGAG 1 cut(s) 1059
Bpu10I CCTNAGC 1 cut(s) 1794
BpuEI CTTGAG 2 cut(s) 8, 645
BsaAI YACGTR 2 cut(s) 473, 1929
BsaJI CCNNGG 1 cut(s) 1684
BsaWI WCCGGW 1 cut(s) 2030
Bsc4I CCNNNNNNNGG 5 cut(s) 334, 500, 1207, 1358, 1690
Bse1I ACTGG 4 cut(s) 121, 175, 1523, 1530
Bse3DI GCAATG 1 cut(s) 741
BseBI CCWGG 2 cut(s) 947, 1971
BseDI CCNNGG 1 cut(s) 1684
BseGI GGATG 1 cut(s) 450
BseLI CCNNNNNNNGG 5 cut(s) 334, 500, 1207, 1358, 1690
BseMI GCAATG 1 cut(s) 741
BseMII CTCAG 2 cut(s) 237, 1808
BseNI ACTGG 4 cut(s) 121, 175, 1523, 1530
BseXI GCAGC 3 cut(s) 905, 1318, 1972
BsgI GTGCAG 1 cut(s) 694
BshFI GGCC 6 cut(s) 17, 52, 113, 432, 1316, 1974
BsiHKCI CYCGRG 1 cut(s) 1311
BsiSI CCGG 1 cut(s) 2031
BslFI GGGAC 4 cut(s) 107, 476, 551, 2027
BslI CCNNNNNNNGG 5 cut(s) 334, 500, 1207, 1358, 1690
BsmAI GTCTC 1 cut(s) 1802
BsmBI CGTCTC 1 cut(s) 1802
BsmFI GGGAC 4 cut(s) 107, 476, 551, 2027
BsmI GAATGC 2 cut(s) 477, 1251
BsnI GGCC 6 cut(s) 17, 52, 113, 432, 1316, 1974
BsoBI CYCGRG 1 cut(s) 1311
Bsp1286I GDGCHC 1 cut(s) 188
Bsp1407I TGTACA 1 cut(s) 318
Bsp143I GATC 5 cut(s) 208, 237, 592, 1498, 1863
BspACI CCGC 3 cut(s) 1275, 1508, 1691
BspANI GGCC 6 cut(s) 17, 52, 113, 432, 1316, 1974
BspCNI CTCAG 2 cut(s) 238, 1807
BspHI TCATGA 2 cut(s) 649, 2007
BspLI GGNNCC 2 cut(s) 431, 586
BspPI GGATC 1 cut(s) 245
BspQI GCTCTTC 1 cut(s) 1060
BsrBI CCGCTC 1 cut(s) 1691
BsrDI GCAATG 1 cut(s) 741
BsrGI TGTACA 1 cut(s) 318
BsrI ACTGG 4 cut(s) 121, 175, 1523, 1530
BssECI CCNNGG 1 cut(s) 1684
BssMI GATC 5 cut(s) 208, 237, 592, 1498, 1863
BssSI CACGAG 1 cut(s) 804
BssT1I CCWWGG 1 cut(s) 1684
Bst2BI CACGAG 1 cut(s) 804
Bst2UI CCWGG 2 cut(s) 947, 1971
Bst4CI ACNGT 3 cut(s) 280, 1738, 2052
Bst6I CTCTTC 3 cut(s) 920, 1060, 1613
BstAUI TGTACA 1 cut(s) 318
BstBAI YACGTR 2 cut(s) 473, 1929
BstC8I GCNNGC 3 cut(s) 15, 992, 1249
BstDEI CTNAG 4 cut(s) 246, 374, 1481, 1794
BstF5I GGATG 1 cut(s) 450
BstKTI GATC 5 cut(s) 211, 240, 595, 1501, 1866
BstMAI GTCTC 1 cut(s) 1802
BstMBI GATC 5 cut(s) 208, 237, 592, 1498, 1863
BstMWI GCNNNNNNNGC 4 cut(s) 863, 1354, 1697, 1799
BstNI CCWGG 2 cut(s) 947, 1971
BstNSI RCATGY 3 cut(s) 342, 1222, 1275
BstSCI CCNGG 2 cut(s) 945, 1969
BstSFI CTRYAG 1 cut(s) 1290
BstSNI TACGTA 1 cut(s) 1929
BstV1I GCAGC 3 cut(s) 905, 1318, 1972
BstXI CCANNNNNNTGG 2 cut(s) 953, 1537
BsuRI GGCC 6 cut(s) 17, 52, 113, 432, 1316, 1974
BtsCI GGATG 1 cut(s) 450
BtsI GCAGTG 2 cut(s) 412, 1352
BtsIMutI CAGTG 7 cut(s) 114, 276, 412, 746, 1352, 1530, 1537
Cac8I GCNNGC 3 cut(s) 15, 992, 1249
CaiI CAGNNNCTG 1 cut(s) 360
CciI TCATGA 2 cut(s) 649, 2007
Cfr13I GGNCC 3 cut(s) 430, 1314, 1493
Csp6I GTAC 7 cut(s) 258, 319, 680, 1094, 1269, 1563, 1930
CspCI CAANNNNNGTGG 2 cut(s) 454, 489
CviQI GTAC 7 cut(s) 258, 319, 680, 1094, 1269, 1563, 1930
DdeI CTNAG 4 cut(s) 246, 374, 1481, 1794
DpnI GATC 5 cut(s) 210, 239, 594, 1500, 1865
DpnII GATC 5 cut(s) 208, 237, 592, 1498, 1863
DraI TTTAAA 1 cut(s) 1879
EaeI YGGCCR 3 cut(s) 50, 111, 1972
Eam1104I CTCTTC 3 cut(s) 920, 1060, 1613
EarI CTCTTC 3 cut(s) 920, 1060, 1613
Eco105I TACGTA 1 cut(s) 1929
Eco130I CCWWGG 1 cut(s) 1684
Eco24I GRGCYC 1 cut(s) 188
Eco32I GATATC 1 cut(s) 313
Eco47I GGWCC 1 cut(s) 1493
Eco57I CTGAAG 1 cut(s) 770
Eco88I CYCGRG 1 cut(s) 1311
EcoRII CCWGG 2 cut(s) 945, 1969
EcoRV GATATC 1 cut(s) 313
EcoT14I CCWWGG 1 cut(s) 1684
EcoT22I ATGCAT 1 cut(s) 1789
EcoT38I GRGCYC 1 cut(s) 188
ErhI CCWWGG 1 cut(s) 1684
Esp3I CGTCTC 1 cut(s) 1802
FalI AAGNNNNNCTT 4 cut(s) 82, 114, 1221, 1253
FaqI GGGAC 4 cut(s) 107, 476, 551, 2027
FauI CCCGC 1 cut(s) 1684
FbaI TGATCA 1 cut(s) 1498
FblI GTMKAC 1 cut(s) 1060
Fnu4HI GCNGC 3 cut(s) 919, 1332, 1986
FokI GGATG 1 cut(s) 457
FriOI GRGCYC 1 cut(s) 188
Fsp4HI GCNGC 3 cut(s) 919, 1332, 1986
FspBI CTAG 3 cut(s) 261, 1224, 1514
GluI GCNGC 3 cut(s) 919, 1332, 1986
GsuI CTGGAG 1 cut(s) 1059
HaeIII GGCC 6 cut(s) 17, 52, 113, 432, 1316, 1974
HapII CCGG 1 cut(s) 2031
HincII GTYRAC 3 cut(s) 1061, 1648, 1779
HindII GTYRAC 3 cut(s) 1061, 1648, 1779
HindIII AAGCTT 1 cut(s) 1346
HinfI GANTC 8 cut(s) 95, 346, 384, 634, 774, 812, 935, 1609
HpaI GTTAAC 1 cut(s) 1648
HpaII CCGG 1 cut(s) 2031
Hpy166II GTNNAC 4 cut(s) 956, 1061, 1648, 1779
Hpy188I TCNGA 9 cut(s) 242, 424, 633, 1168, 1242, 1281, 1464, 1617, 1774
Hpy8I GTNNAC 4 cut(s) 956, 1061, 1648, 1779
Hpy99I CGWCG 1 cut(s) 1065
HpyAV CCTTC 6 cut(s) 84, 745, 1119, 1201, 1661, 1856
HpyCH4III ACNGT 3 cut(s) 280, 1738, 2052
HpyCH4IV ACGT 3 cut(s) 472, 726, 1928
HpyF10VI GCNNNNNNNGC 4 cut(s) 863, 1354, 1697, 1799
HpyF3I CTNAG 4 cut(s) 246, 374, 1481, 1794
HpySE526I ACGT 3 cut(s) 472, 726, 1928
Ksp22I TGATCA 1 cut(s) 1498
KspAI GTTAAC 1 cut(s) 1648
Kzo9I GATC 5 cut(s) 208, 237, 592, 1498, 1863
LguI GCTCTTC 1 cut(s) 1060
LmnI GCTCC 4 cut(s) 590, 1471, 1658, 1688
Lsp1109I GCAGC 3 cut(s) 905, 1318, 1972
LweI GCATC 1 cut(s) 192
MaeI CTAG 3 cut(s) 261, 1224, 1514
MaeII ACGT 3 cut(s) 472, 726, 1928
MaeIII GTNAC 3 cut(s) 468, 1142, 1525
MalI GATC 5 cut(s) 210, 239, 594, 1500, 1865
MbiI CCGCTC 1 cut(s) 1691
MboI GATC 5 cut(s) 208, 237, 592, 1498, 1863
MboII GAAGA 9 cut(s) 33, 568, 937, 1077, 1229, 1292, 1604, 1630, 1996
MhlI GDGCHC 1 cut(s) 188
MlsI TGGCCA 2 cut(s) 113, 1974
MluNI TGGCCA 2 cut(s) 113, 1974
MlyI GAGTC 3 cut(s) 89, 628, 944
MmeI TCCRAC 1 cut(s) 142
Mox20I TGGCCA 2 cut(s) 113, 1974
Mph1103I ATGCAT 1 cut(s) 1789
MroXI GAANNNNTTC 4 cut(s) 1158, 1699, 1768, 2024
MscI TGGCCA 2 cut(s) 113, 1974
MseI TTAA 7 cut(s) 506, 546, 720, 765, 1412, 1647, 1878
Msp20I TGGCCA 2 cut(s) 113, 1974
MspI CCGG 1 cut(s) 2031
MspR9I CCNGG 2 cut(s) 947, 1971
Mva1269I GAATGC 2 cut(s) 477, 1251
MvaI CCWGG 2 cut(s) 947, 1971
MwoI GCNNNNNNNGC 4 cut(s) 863, 1354, 1697, 1799
NdeII GATC 5 cut(s) 208, 237, 592, 1498, 1863
NlaIV GGNNCC 2 cut(s) 431, 586
NmeAIII GCCGAG 2 cut(s) 314, 319
NmuCI GTSAC 1 cut(s) 1525
NsiI ATGCAT 1 cut(s) 1789
NspI RCATGY 3 cut(s) 342, 1222, 1275
PagI TCATGA 2 cut(s) 649, 2007
PciI ACATGT 1 cut(s) 1218
PciSI GCTCTTC 1 cut(s) 1060
PctI GAATGC 2 cut(s) 477, 1251
PdmI GAANNNNTTC 4 cut(s) 1158, 1699, 1768, 2024
PfeI GAWTC 5 cut(s) 346, 384, 774, 812, 1609
PflMI CCANNNNNTGG 2 cut(s) 500, 1358
PkrI GCNGC 3 cut(s) 920, 1333, 1987
PleI GAGTC 3 cut(s) 89, 628, 943
PpsI GAGTC 3 cut(s) 89, 628, 943
Ppu21I YACGTR 2 cut(s) 473, 1929
PscI ACATGT 1 cut(s) 1218
PshBI ATTAAT 1 cut(s) 1412
PsiI TTATAA 2 cut(s) 830, 1076
Psp6I CCWGG 2 cut(s) 945, 1969
PspGI CCWGG 2 cut(s) 945, 1969
PspN4I GGNNCC 2 cut(s) 431, 586
PspPI GGNCC 3 cut(s) 430, 1314, 1493
PstNI CAGNNNCTG 1 cut(s) 360
RsaI GTAC 7 cut(s) 259, 320, 681, 1095, 1270, 1564, 1931
RsaNI GTAC 7 cut(s) 258, 319, 680, 1094, 1269, 1563, 1930
SalI GTCGAC 1 cut(s) 1059
SapI GCTCTTC 1 cut(s) 1060
SaqAI TTAA 7 cut(s) 506, 546, 720, 765, 1412, 1647, 1878
SatI GCNGC 3 cut(s) 919, 1332, 1986
Sau3AI GATC 5 cut(s) 208, 237, 592, 1498, 1863
Sau96I GGNCC 3 cut(s) 430, 1314, 1493
SchI GAGTC 3 cut(s) 89, 628, 944
ScrFI CCNGG 2 cut(s) 947, 1971
SduI GDGCHC 1 cut(s) 188
SfaNI GCATC 1 cut(s) 192
SfcI CTRYAG 1 cut(s) 1290
SinI GGWCC 1 cut(s) 1493
SmlI CTYRAG 2 cut(s) 23, 660
SmoI CTYRAG 2 cut(s) 23, 660
SnaBI TACGTA 1 cut(s) 1929
SpeI ACTAGT 1 cut(s) 260
SsiI CCGC 3 cut(s) 1275, 1508, 1691
SspI AATATT 1 cut(s) 1103
SspMI CTAG 3 cut(s) 261, 1224, 1514
StyD4I CCNGG 2 cut(s) 945, 1969
StyI CCWWGG 1 cut(s) 1684
TaaI ACNGT 3 cut(s) 280, 1738, 2052
TaiI ACGT 3 cut(s) 475, 729, 1931
TaqI TCGA 1 cut(s) 1060
TatI WGTACW 3 cut(s) 318, 1093, 1562
TfiI GAWTC 5 cut(s) 346, 384, 774, 812, 1609
Tru1I TTAA 7 cut(s) 506, 546, 720, 765, 1412, 1647, 1878
Tru9I TTAA 7 cut(s) 506, 546, 720, 765, 1412, 1647, 1878
TscAI CASTG 7 cut(s) 121, 283, 419, 753, 1359, 1530, 1537
TseFI GTSAC 1 cut(s) 1525
TseI GCWGC 3 cut(s) 918, 1331, 1985
Tsp45I GTSAC 1 cut(s) 1525
TspDTI ATGAA 9 cut(s) 33, 420, 575, 638, 730, 852, 1598, 1906, 1996
TspRI CASTG 7 cut(s) 121, 283, 419, 753, 1359, 1530, 1537
Van91I CCANNNNNTGG 2 cut(s) 500, 1358
VpaK11BI GGWCC 1 cut(s) 1493
VspI ATTAAT 1 cut(s) 1412
XapI RAATTY 4 cut(s) 674, 1874, 1889, 2020
XbaI TCTAGA 1 cut(s) 1223
XceI RCATGY 3 cut(s) 342, 1222, 1275
XmiI GTMKAC 1 cut(s) 1060
XmnI GAANNNNTTC 4 cut(s) 1158, 1699, 1768, 2024
XspI CTAG 3 cut(s) 261, 1224, 1514
Zsp2I ATGCAT 1 cut(s) 1789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.