Rroxscaffold_1G00007350

Belongs to the helicase family. RecQ subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0003692
Physical Location & Seq
Reverse (-)
9403675 .. 9410276
6602 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00007350.1

Sequence Viewer

Length: 1587 bp
ATGTCGTCTATGCAGGCCATTCTCAAGAAATATGGGTTTTCTTCATTTCGGCCATACCAAAAGAAAGTGATTGAGAAAATCATAGCAGGAAGGGACTCTTTGATTGTCATGGCCACTGGAAGTGGCAAGTCTTTGTGCTATCAAGTGCCTCCTTTGGTTGTTGGAAAGACTGGTGTGGTTGTGAGCCCTCTATTATCCTTAATGCAAGATCAGGTAATGGCTTTGAAACAAAGAGGGATCAGAGCTGAGTATATGGGCAGTAGTCAAACTGATAGCACTGTCCAGAGCCGAGCCGAGAGTGGTGAATTTGATATCTTGTACATGACCCCTGAAAAGGCATGTAAGATTCCTGACAGCTTCTGGTCAAAATTACTAAGGGCTGGAATCTGCCTGTTTGCTGTTGATGAAGCACACTGCATTTCGGAGTGGGGCCATGATTTCAGGATGGACTATAAGCGATTGGACATGTTACGTGGCATTCTTGTTGGTGTCCCATTTATTGGCTTAACTGCAACTGCTACTAAAAAGGTTCAAAGGGACATTGTTAATTCCTTGAAGATGAAAAATCCATATTACAGAATAGGCTCCTTTGATCGTGGAAATCTGTTCTACGGTGTCAAGTTATTCAATCAGACTCAATCATTTGTTCATGAGCTAGCTCAAAAAGTTTCCAAATTTGTACACACAGATGGTTCAACTATAATTTACTGCACGACAATTAAAGACGTTTATCAGGTATTCATTTCACTGAAGGAGGTGGGCGTTAAGGCTGGAATCTACCATAGTGAGATGGATAATAAAGCTCGTGCCGAATCCCATAGCATGGGTATTGATAAGCCAAACATAAGACAAGTAATCCATTATGGCTGCCCGAAGAGTTTGGGGTCTTATTACCAGGAAAGTGGACGATGTGGTAGAGATGGTATGGCTTCTGTCTGCTGGCTCTATTACACAAGAAGCGACCTCACAAAAGCTGAATTTTATGCTGGAGAGTGTCAAACAGAAAGTCGACGAAGAGCTGTTATAAAGTCGTTGAGGGCAGTACAAAAATATTGCTTATCAACAACTTGCAGAAGGAAGTTCTTGCTTGGTTACTTTGGGGAAATCTTTCCATCTGATAAGTGTGGTAATTGTGATAATTGTATTTCCCCAAAGAAGGAGATGGACATGTCTAGAGAAGCATATCTTCTAATGGCTTGCATTCAATCATGTCGGGGTACATGCGGTCTGAATATGCCTGTAGATATTCTTCGTGGCTCTCGGGCCAAAAAGATTCTTGCTGCCGAATATGACAAGCTTCCACTGCATGGACTTGGGAAAGACTATTCTGCAAATTGGTGGAAAACACTTGCTTACCAATTAATCTCTTATGGTTATTTGATGGAGAACTGCAGAAATGTAGGTGTCAGTCTGAAAGGGGAGCAATTTCTACGTTCTGCTGGACCTGATCATCAACAGTCTCTAGTGTTGCCGGTGACCAGTGAATTGGTAGATGATGAGGACAATAAAAGTACATCAGGAGAGAAAGACATGAAAATGTATGGAGTAGAAAGGTTGAATCTTCGGAAGAGTAGGTCTCGCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000217 GO:0000287 GO:0000400 GO:0000403 GO:0000405 GO:0000723 GO:0000724 GO:0000725 GO:0000731 GO:0000781 GO:0001302 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003682 GO:0003684 GO:0003824 GO:0004003 GO:0004386 GO:0004518 GO:0004527 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005694 GO:0005730 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006284 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0006996 GO:0007154 GO:0007275 GO:0007568 GO:0007569 GO:0008026 GO:0008094 GO:0008104 GO:0008150 GO:0008152 GO:0008408 GO:0009058 GO:0009059 GO:0009267 GO:0009314 GO:0009378 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009893 GO:0009987 GO:0009991 GO:0010212 GO:0010225 GO:0010259 GO:0010332 GO:0010604 GO:0010941 GO:0015630 GO:0016043 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030145 GO:0031297 GO:0031323 GO:0031325 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032200 GO:0032356 GO:0032357 GO:0032392 GO:0032501 GO:0032502 GO:0032508 GO:0033036 GO:0033365 GO:0033554 GO:0034504 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0040009 GO:0042592 GO:0042594 GO:0042623 GO:0042802 GO:0042803 GO:0042981 GO:0042995 GO:0043005 GO:0043067 GO:0043085 GO:0043138 GO:0043140 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0044806 GO:0044877 GO:0045005 GO:0045911 GO:0045935 GO:0046483 GO:0046872 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051179 GO:0051276 GO:0051336 GO:0051345 GO:0051641 GO:0051716 GO:0051880 GO:0060249 GO:0060255 GO:0060542 GO:0061749 GO:0061820 GO:0061821 GO:0062037 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070035 GO:0070336 GO:0070337 GO:0070727 GO:0071103 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071496 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0090305 GO:0090657 GO:0097159 GO:0097458 GO:0098530 GO:0098687 GO:0104004 GO:0120025 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902570 GO:1905773
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DEAD HRDC HTH_40 Helicase_C RQC RecQ_Zn_bind

Protein Analysis

528

Amino Acids

59.56

Weight (kDa)

9.22

Isoelectric Point (pI)

46.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 15 - 172 2.2e-06 Type III restriction enzyme, res subunit
DEAD PF00270 17 - 178 4.4e-25 DEAD/DEAH box helicase
Helicase_C PF00271 274 - 308 3.5e-06 Helicase conserved C-terminal domain
RecQ_Zn_bind PF16124 320 - 381 3.4e-16 RecQ zinc-binding
RQC PF09382 384 - 471 1.7e-20 RQC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1025
AccB7I CCANNNNNTGG 3 cut(s) 500, 823, 1307
AccI GTMKAC 1 cut(s) 1009
AciI CCGC 1 cut(s) 1224
AclWI GGATC 1 cut(s) 245
AcoI YGGCCR 2 cut(s) 50, 111
AcsI RAATTY 3 cut(s) 305, 674, 977
AcuI CTGAAG 1 cut(s) 770
AfaI GTAC 5 cut(s) 320, 681, 1044, 1219, 1513
AfiI CCNNNNNNNGG 5 cut(s) 334, 500, 823, 1156, 1307
AflIII ACRYGT 2 cut(s) 465, 1167
AgsI TTSAA 7 cut(s) 226, 533, 556, 628, 696, 1205, 1558
AjnI CCWGG 1 cut(s) 894
AluBI AGCT 8 cut(s) 245, 357, 655, 659, 803, 974, 1019, 1297
AluI AGCT 8 cut(s) 245, 357, 655, 659, 803, 974, 1019, 1297
Alw26I GTCTC 2 cut(s) 1464, 1581
AlwI GGATC 1 cut(s) 245
AlwNI CAGNNNCTG 1 cut(s) 360
Ama87I CYCGRG 1 cut(s) 1260
AoxI GGCC 5 cut(s) 15, 50, 111, 430, 1263
ApeKI GCWGC 2 cut(s) 867, 1280
ApoI RAATTY 3 cut(s) 305, 674, 977
ArsI GACNNNNNNTTYG 2 cut(s) 991, 1023
AseI ATTAAT 1 cut(s) 1361
Asp700I GAANNNNTTC 1 cut(s) 1107
AspS9I GGNCC 3 cut(s) 430, 1263, 1442
AsuHPI GGTGA 2 cut(s) 314, 1486
AsuNHI GCTAGC 1 cut(s) 655
AvaI CYCGRG 1 cut(s) 1260
AvaII GGWCC 1 cut(s) 1442
BalI TGGCCA 1 cut(s) 113
BanII GRGCYC 1 cut(s) 188
BarI GAAGNNNNNNTAC 2 cut(s) 1233, 1265
BauI CACGAG 1 cut(s) 804
BbvI GCAGC 2 cut(s) 854, 1267
BccI CCATC 7 cut(s) 439, 683, 784, 914, 1120, 1156, 1375
BciT130I CCWGG 1 cut(s) 896
BclI TGATCA 1 cut(s) 1447
BcoDI GTCTC 2 cut(s) 1464, 1581
BfaI CTAG 3 cut(s) 656, 1173, 1463
BfmI CTRYAG 2 cut(s) 1239, 1390
BisI GCNGC 2 cut(s) 868, 1281
BlsI GCNGC 2 cut(s) 869, 1282
Bme1390I CCNGG 1 cut(s) 896
Bme18I GGWCC 1 cut(s) 1442
BmeT110I CYCGRG 1 cut(s) 1260
BmgT120I GGNCC 3 cut(s) 430, 1263, 1442
BmiI GGNNCC 2 cut(s) 431, 586
BmrFI CCNGG 1 cut(s) 896
BmtI GCTAGC 1 cut(s) 659
BplI GAGNNNNNCTC 1 cut(s) 1561
BpmI CTGGAG 1 cut(s) 1008
BpuEI CTTGAG 1 cut(s) 8
BsaAI YACGTR 1 cut(s) 473
BsaI GGTCTC 1 cut(s) 1581
Bsc4I CCNNNNNNNGG 5 cut(s) 334, 500, 823, 1156, 1307
Bse118I RCCGGY 1 cut(s) 1471
Bse1I ACTGG 3 cut(s) 121, 175, 1479
BseBI CCWGG 1 cut(s) 896
BseGI GGATG 1 cut(s) 450
BseLI CCNNNNNNNGG 5 cut(s) 334, 500, 823, 1156, 1307
BseMII CTCAG 1 cut(s) 237
BseNI ACTGG 3 cut(s) 121, 175, 1479
BseXI GCAGC 2 cut(s) 854, 1267
BsgI GTGCAG 1 cut(s) 694
BshFI GGCC 5 cut(s) 17, 52, 113, 432, 1265
BsiHKCI CYCGRG 1 cut(s) 1260
BsiSI CCGG 1 cut(s) 1472
BslFI GGGAC 3 cut(s) 107, 476, 551
BslI CCNNNNNNNGG 5 cut(s) 334, 500, 823, 1156, 1307
BsmAI GTCTC 2 cut(s) 1464, 1581
BsmFI GGGAC 3 cut(s) 107, 476, 551
BsmI GAATGC 2 cut(s) 477, 1200
BsnI GGCC 5 cut(s) 17, 52, 113, 432, 1265
Bso31I GGTCTC 1 cut(s) 1581
BsoBI CYCGRG 1 cut(s) 1260
Bsp1286I GDGCHC 1 cut(s) 188
Bsp1407I TGTACA 2 cut(s) 318, 679
Bsp143I GATC 4 cut(s) 208, 237, 592, 1447
BspACI CCGC 1 cut(s) 1224
BspANI GGCC 5 cut(s) 17, 52, 113, 432, 1265
BspCNI CTCAG 1 cut(s) 238
BspHI TCATGA 1 cut(s) 649
BspLI GGNNCC 2 cut(s) 431, 586
BspMAI CTGCAG 1 cut(s) 1394
BspOI GCTAGC 1 cut(s) 659
BspPI GGATC 1 cut(s) 245
BspQI GCTCTTC 1 cut(s) 1009
BspTNI GGTCTC 1 cut(s) 1581
BsrFI RCCGGY 1 cut(s) 1471
BsrGI TGTACA 2 cut(s) 318, 679
BsrI ACTGG 3 cut(s) 121, 175, 1479
BssAI RCCGGY 1 cut(s) 1471
BssMI GATC 4 cut(s) 208, 237, 592, 1447
BssSI CACGAG 1 cut(s) 804
Bst2BI CACGAG 1 cut(s) 804
Bst2UI CCWGG 1 cut(s) 896
Bst4CI ACNGT 3 cut(s) 280, 614, 1458
Bst6I CTCTTC 3 cut(s) 869, 1009, 1562
BstAUI TGTACA 2 cut(s) 318, 679
BstBAI YACGTR 1 cut(s) 473
BstC8I GCNNGC 4 cut(s) 15, 657, 941, 1198
BstDEI CTNAG 2 cut(s) 246, 374
BstEII GGTNACC 1 cut(s) 1474
BstF5I GGATG 1 cut(s) 450
BstKTI GATC 4 cut(s) 211, 240, 595, 1450
BstMAI GTCTC 2 cut(s) 1464, 1581
BstMBI GATC 4 cut(s) 208, 237, 592, 1447
BstMWI GCNNNNNNNGC 1 cut(s) 1303
BstNI CCWGG 1 cut(s) 896
BstNSI RCATGY 4 cut(s) 342, 469, 1171, 1224
BstPI GGTNACC 1 cut(s) 1474
BstSCI CCNGG 1 cut(s) 894
BstSFI CTRYAG 2 cut(s) 1239, 1390
BstV1I GCAGC 2 cut(s) 854, 1267
BstXI CCANNNNNNTGG 2 cut(s) 902, 1486
BsuRI GGCC 5 cut(s) 17, 52, 113, 432, 1265
BtsCI GGATG 1 cut(s) 450
BtsI GCAGTG 2 cut(s) 412, 1301
BtsIMutI CAGTG 6 cut(s) 114, 276, 412, 746, 1301, 1486
Cac8I GCNNGC 4 cut(s) 15, 657, 941, 1198
CaiI CAGNNNCTG 1 cut(s) 360
CciI TCATGA 1 cut(s) 649
Cfr10I RCCGGY 1 cut(s) 1471
Cfr13I GGNCC 3 cut(s) 430, 1263, 1442
Csp6I GTAC 5 cut(s) 319, 680, 1043, 1218, 1512
CviQI GTAC 5 cut(s) 319, 680, 1043, 1218, 1512
DdeI CTNAG 2 cut(s) 246, 374
DpnI GATC 4 cut(s) 210, 239, 594, 1449
DpnII GATC 4 cut(s) 208, 237, 592, 1447
EaeI YGGCCR 2 cut(s) 50, 111
Eam1104I CTCTTC 3 cut(s) 869, 1009, 1562
EarI CTCTTC 3 cut(s) 869, 1009, 1562
Eco24I GRGCYC 1 cut(s) 188
Eco31I GGTCTC 1 cut(s) 1581
Eco32I GATATC 1 cut(s) 313
Eco47I GGWCC 1 cut(s) 1442
Eco57I CTGAAG 1 cut(s) 770
Eco88I CYCGRG 1 cut(s) 1260
Eco91I GGTNACC 1 cut(s) 1474
EcoO65I GGTNACC 1 cut(s) 1474
EcoRII CCWGG 1 cut(s) 894
EcoRV GATATC 1 cut(s) 313
EcoT38I GRGCYC 1 cut(s) 188
FalI AAGNNNNNCTT 4 cut(s) 82, 114, 1170, 1202
FaqI GGGAC 3 cut(s) 107, 476, 551
FbaI TGATCA 1 cut(s) 1447
FblI GTMKAC 1 cut(s) 1009
Fnu4HI GCNGC 2 cut(s) 868, 1281
FokI GGATG 1 cut(s) 457
FriOI GRGCYC 1 cut(s) 188
Fsp4HI GCNGC 2 cut(s) 868, 1281
FspBI CTAG 3 cut(s) 656, 1173, 1463
GluI GCNGC 2 cut(s) 868, 1281
GsuI CTGGAG 1 cut(s) 1008
HaeIII GGCC 5 cut(s) 17, 52, 113, 432, 1265
HapII CCGG 1 cut(s) 1472
HincII GTYRAC 1 cut(s) 1010
HindII GTYRAC 1 cut(s) 1010
HindIII AAGCTT 1 cut(s) 1295
HinfI GANTC 8 cut(s) 95, 346, 384, 634, 774, 812, 1273, 1558
HpaII CCGG 1 cut(s) 1472
HphI GGTGA 2 cut(s) 314, 1486
Hpy166II GTNNAC 3 cut(s) 682, 905, 1010
Hpy188I TCNGA 7 cut(s) 242, 424, 633, 1117, 1230, 1413, 1566
Hpy188III TCNNGA 7 cut(s) 25, 283, 350, 442, 650, 1173, 1518
Hpy8I GTNNAC 3 cut(s) 682, 905, 1010
Hpy99I CGWCG 1 cut(s) 1014
HpyAV CCTTC 4 cut(s) 84, 745, 1068, 1150
HpyCH4III ACNGT 3 cut(s) 280, 614, 1458
HpyCH4IV ACGT 3 cut(s) 472, 726, 1432
HpyF10VI GCNNNNNNNGC 1 cut(s) 1303
HpyF3I CTNAG 2 cut(s) 246, 374
HpySE526I ACGT 3 cut(s) 472, 726, 1432
Ksp22I TGATCA 1 cut(s) 1447
Kzo9I GATC 4 cut(s) 208, 237, 592, 1447
LguI GCTCTTC 1 cut(s) 1009
LmnI GCTCC 2 cut(s) 590, 1420
Lsp1109I GCAGC 2 cut(s) 854, 1267
MaeI CTAG 3 cut(s) 656, 1173, 1463
MaeII ACGT 3 cut(s) 472, 726, 1432
MaeIII GTNAC 3 cut(s) 468, 1091, 1474
MalI GATC 4 cut(s) 210, 239, 594, 1449
MboI GATC 4 cut(s) 208, 237, 592, 1447
MboII GAAGA 8 cut(s) 33, 568, 886, 1026, 1178, 1241, 1553, 1579
MhlI GDGCHC 1 cut(s) 188
MlsI TGGCCA 1 cut(s) 113
MluNI TGGCCA 1 cut(s) 113
MlyI GAGTC 2 cut(s) 89, 628
MmeI TCCRAC 1 cut(s) 142
MnlI CCTC 7 cut(s) 159, 198, 227, 748, 974, 1029, 1492
Mox20I TGGCCA 1 cut(s) 113
MroXI GAANNNNTTC 1 cut(s) 1107
MscI TGGCCA 1 cut(s) 113
MseI TTAA 6 cut(s) 200, 506, 546, 720, 765, 1361
MslI CAYNNNNRTG 2 cut(s) 687, 1535
Msp20I TGGCCA 1 cut(s) 113
MspI CCGG 1 cut(s) 1472
MspR9I CCNGG 1 cut(s) 896
Mva1269I GAATGC 2 cut(s) 477, 1200
MvaI CCWGG 1 cut(s) 896
MwoI GCNNNNNNNGC 1 cut(s) 1303
NdeII GATC 4 cut(s) 208, 237, 592, 1447
NheI GCTAGC 1 cut(s) 655
NlaIV GGNNCC 2 cut(s) 431, 586
NmeAIII GCCGAG 2 cut(s) 314, 319
NmuCI GTSAC 1 cut(s) 1474
NspI RCATGY 4 cut(s) 342, 469, 1171, 1224
PagI TCATGA 1 cut(s) 649
PciI ACATGT 2 cut(s) 465, 1167
PciSI GCTCTTC 1 cut(s) 1009
PctI GAATGC 2 cut(s) 477, 1200
PdmI GAANNNNTTC 1 cut(s) 1107
PfeI GAWTC 6 cut(s) 346, 384, 774, 812, 1273, 1558
PflMI CCANNNNNTGG 3 cut(s) 500, 823, 1307
PkrI GCNGC 2 cut(s) 869, 1282
PleI GAGTC 2 cut(s) 89, 628
PpsI GAGTC 2 cut(s) 89, 628
Ppu21I YACGTR 1 cut(s) 473
PscI ACATGT 2 cut(s) 465, 1167
PshBI ATTAAT 1 cut(s) 1361
PsiI TTATAA 1 cut(s) 1025
Psp6I CCWGG 1 cut(s) 894
PspEI GGTNACC 1 cut(s) 1474
PspGI CCWGG 1 cut(s) 894
PspN4I GGNNCC 2 cut(s) 431, 586
PspPI GGNCC 3 cut(s) 430, 1263, 1442
PstI CTGCAG 1 cut(s) 1394
PstNI CAGNNNCTG 1 cut(s) 360
RsaI GTAC 5 cut(s) 320, 681, 1044, 1219, 1513
RsaNI GTAC 5 cut(s) 319, 680, 1043, 1218, 1512
RseI CAYNNNNRTG 2 cut(s) 687, 1535
SalI GTCGAC 1 cut(s) 1008
SapI GCTCTTC 1 cut(s) 1009
SaqAI TTAA 6 cut(s) 200, 506, 546, 720, 765, 1361
SatI GCNGC 2 cut(s) 868, 1281
Sau3AI GATC 4 cut(s) 208, 237, 592, 1447
Sau96I GGNCC 3 cut(s) 430, 1263, 1442
SchI GAGTC 2 cut(s) 89, 628
ScrFI CCNGG 1 cut(s) 896
SduI GDGCHC 1 cut(s) 188
SfcI CTRYAG 2 cut(s) 1239, 1390
SinI GGWCC 1 cut(s) 1442
SmiMI CAYNNNNRTG 2 cut(s) 687, 1535
SmlI CTYRAG 1 cut(s) 23
SmoI CTYRAG 1 cut(s) 23
SsiI CCGC 1 cut(s) 1224
SspI AATATT 1 cut(s) 1052
SspMI CTAG 3 cut(s) 656, 1173, 1463
StyD4I CCNGG 1 cut(s) 894
TaaI ACNGT 3 cut(s) 280, 614, 1458
TaiI ACGT 3 cut(s) 475, 729, 1435
TaqI TCGA 1 cut(s) 1009
TatI WGTACW 4 cut(s) 318, 679, 1042, 1511
TfiI GAWTC 6 cut(s) 346, 384, 774, 812, 1273, 1558
Tru1I TTAA 6 cut(s) 200, 506, 546, 720, 765, 1361
Tru9I TTAA 6 cut(s) 200, 506, 546, 720, 765, 1361
TscAI CASTG 6 cut(s) 121, 283, 419, 753, 1308, 1486
TseFI GTSAC 1 cut(s) 1474
TseI GCWGC 2 cut(s) 867, 1280
Tsp45I GTSAC 1 cut(s) 1474
TspDTI ATGAA 6 cut(s) 33, 420, 575, 638, 730, 1547
TspRI CASTG 6 cut(s) 121, 283, 419, 753, 1308, 1486
Van91I CCANNNNNTGG 3 cut(s) 500, 823, 1307
VpaK11BI GGWCC 1 cut(s) 1442
VspI ATTAAT 1 cut(s) 1361
XapI RAATTY 3 cut(s) 305, 674, 977
XbaI TCTAGA 1 cut(s) 1172
XceI RCATGY 4 cut(s) 342, 469, 1171, 1224
XmiI GTMKAC 1 cut(s) 1009
XmnI GAANNNNTTC 1 cut(s) 1107
XspI CTAG 3 cut(s) 656, 1173, 1463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.