Rmu_sc0004053.1_g000009

Belongs to the helicase family. RecQ subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004053.1
OG0003692
Physical Location & Seq
Reverse (-)
37508 .. 47538
10031 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004053.1_g000009.1.cds

Sequence Viewer

Length: 2304 bp
atggccactggaagtggcaagtctttgtgctatcaagtgcctcctttggttgttggaaagactggtgtggttgtgagccctcttttatccttgatgcaagatcaggtaatggctttgaaacaaagagggatcagagctgagtatatgggtagtagtcaaactgatagcactgtccagagccgagccgagagtggtcaatttgatatcttgtacatgacccctgaaaaggcatgtaagattcctgacagcttctggtcaaaattactaagggctggaatctgcctgtttgctgttgatgaagcacactgcatatcagagtggggccatgatttcaggatggactacaagcgattggacaagttacgtggcattcttgttggtgtcccatttattggcttaactgcaactgctactaaaaaggttcaaagggacattgttaattccttgaagatgaaaaacccatattacagaataggctcctttgatcgtggaaatctgttctatggtgtcaagttattcaatcggactcaatcatttgttcatgaggtagcccaagaagtttccaaatttgtacgcacagatggttcaactataatttactgcacgacaattaaagacgtttatcaggtattcattgccttgaaggaggtgggcattaaggctggaatctaccatagtgagatggataataaagctcgtgccgaatcccatagattatttataagagatgaagtagatgtcatggttgctactattgctttcggcatgggtattgataagccaaacataagacaagtaatccattatggctgcccgaagagtttggagtcttattaccaggaaagtggacgatgtggtagagatggtatggcttctgtctgctggctctattacacaagaagcgacctcacaaaagctgaattttatgctggagagtgtcaaacaataagtcgacgaagagctgttataaagtcgttgagggcagtacaacaatattgcttatcaacaacttgcagaaggaagttcctgcttggttactttggggaaatctttccatctgataaatgtggtaattgtgataattgtatttccccaaagaaggagatggacatgtccagagaagcatatcttctgatggcttgcattcaatcatgtcggggtacatgcggtctgaatatgcctgtagatattcttcgtggctctcgggccaaaaagattattgctgccgaatatgacaagcttccactgcatggacttgggaaagactattctgcaaattggtggaaaacacttgcttaccaattaatctcttatggtatagtagggaagcattttgaatatgtggtgaactgtaatttatgcatgccagtattcatatcaattcttaatattctattagctgggcttagggatggtgaaagtgccataggtgtcagtcggaaaggggagcaatttctaagttctgctggacctgatcatcaaccgcctctagtcttgccagtgaccagtgaaatggtagatgatgaggacaataaaagtacatcaggagagaaagagatgaaaatgtatggagtaggaaggttgaatcttcggaagacttcgtcgccgtcgtcaggcttcgtcatcatatgcgaggaggtaggattcgggtctggcctggaccgagcagagggcctggacggcgaggatggaaacactctctctagggtttactcgaaagctgacgctttcaacaaaatggctggcgacggtgaatctttgactacgggggtgggaattttcttcttccccttctctgtgatcgatattgctactgggcaacgaagaaatctgacgttgattgggttggatgatggcttcgaggtcggttttgctcttgaaatcgacgaagactatcgagcttgggttcactacaaaaaagaatttaacaactgccgtcgccactgggcgtggcaaacccaatggtttacttcggaaagagttagccgtagtaaaataatatacttacgatatgtttgttgcaggagattacgatcccacctaaatctagtcgctaaccctaatccctcattccctcagcctctattcgagatttcgactgaccctgaccctcagcctctcttcgactcactccctctgtccctcagtttcagtcgccgccgacccaccgcaaagttcgacgtcttaaatcttactcttggagagttggagtcttggggagagcggaggccggaactcaggaagacgagcagtcggagtagacaggaggaaggaggtgagaaactgagaacgtgcggactgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000217 GO:0000287 GO:0000400 GO:0000403 GO:0000405 GO:0000723 GO:0000724 GO:0000725 GO:0000731 GO:0000781 GO:0001302 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003682 GO:0003684 GO:0003824 GO:0004003 GO:0004386 GO:0004518 GO:0004527 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005694 GO:0005730 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006284 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0006996 GO:0007154 GO:0007275 GO:0007568 GO:0007569 GO:0008026 GO:0008094 GO:0008104 GO:0008150 GO:0008152 GO:0008408 GO:0009058 GO:0009059 GO:0009267 GO:0009314 GO:0009378 GO:0009411 GO:0009416 GO:0009605 GO:0009628 GO:0009893 GO:0009987 GO:0009991 GO:0010212 GO:0010225 GO:0010259 GO:0010332 GO:0010604 GO:0010941 GO:0015630 GO:0016043 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030145 GO:0031297 GO:0031323 GO:0031325 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032200 GO:0032356 GO:0032357 GO:0032392 GO:0032501 GO:0032502 GO:0032508 GO:0033036 GO:0033365 GO:0033554 GO:0034504 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0040008 GO:0040009 GO:0042592 GO:0042594 GO:0042623 GO:0042802 GO:0042803 GO:0042981 GO:0042995 GO:0043005 GO:0043067 GO:0043085 GO:0043138 GO:0043140 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0044806 GO:0044877 GO:0045005 GO:0045911 GO:0045935 GO:0046483 GO:0046872 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0048869 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051179 GO:0051276 GO:0051336 GO:0051345 GO:0051641 GO:0051716 GO:0051880 GO:0060249 GO:0060255 GO:0060542 GO:0061749 GO:0061820 GO:0061821 GO:0062037 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070035 GO:0070336 GO:0070337 GO:0070727 GO:0071103 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071496 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0090305 GO:0090657 GO:0097159 GO:0097458 GO:0098530 GO:0098687 GO:0104004 GO:0120025 GO:0140097 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902570 GO:1905773
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DEAD HRDC HTH_40 Helicase_C RQC RecQ_Zn_bind

Protein Analysis

767

Amino Acids

86.31

Weight (kDa)

8.72

Isoelectric Point (pI)

48.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 722, 968
AatII GACGTC 1 cut(s) 2184
AccB7I CCANNNNNTGG 2 cut(s) 392, 1250
AccBSI CCGCTC 1 cut(s) 2224
AccI GTMKAC 2 cut(s) 952, 2260
AciI CCGC 6 cut(s) 1167, 1484, 2158, 2169, 2224, 2295
AclWI GGATC 2 cut(s) 137, 2028
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 566, 920, 1776, 1922
AcyI GRCGYC 1 cut(s) 2181
AfaI GTAC 5 cut(s) 212, 573, 987, 1162, 1540
AfiI CCNNNNNNNGG 6 cut(s) 226, 392, 1099, 1250, 1613, 1669
AflIII ACRYGT 1 cut(s) 1110
AhdI GACNNNNNGTC 1 cut(s) 2250
AjnI CCWGG 3 cut(s) 837, 1656, 1674
AluBI AGCT 9 cut(s) 137, 249, 695, 917, 962, 1240, 1400, 1721, 1901
AluI AGCT 9 cut(s) 137, 249, 695, 917, 962, 1240, 1400, 1721, 1901
AlwI GGATC 2 cut(s) 137, 2028
AlwNI CAGNNNCTG 1 cut(s) 252
Ama87I CYCGRG 1 cut(s) 1203
AoxI GGCC 6 cut(s) 3, 322, 1206, 1654, 1672, 2228
ApeKI GCWGC 2 cut(s) 810, 1223
ApoI RAATTY 4 cut(s) 566, 920, 1776, 1922
ArsI GACNNNNNNTTYG 2 cut(s) 934, 966
AseI ATTAAT 1 cut(s) 1304
Asp700I GAANNNNTTC 1 cut(s) 1050
AspS9I GGNCC 5 cut(s) 322, 1206, 1469, 1660, 1672
AsuHPI GGTGA 4 cut(s) 1357, 1427, 1763, 2288
AvaI CYCGRG 1 cut(s) 1203
AvaII GGWCC 2 cut(s) 1469, 1660
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 1 cut(s) 80
BarI GAAGNNNNNNTAC 2 cut(s) 1176, 1208
BauI CACGAG 1 cut(s) 696
BbsI GAAGAC 3 cut(s) 1601, 1896, 2249
BbvCI CCTCAGC 2 cut(s) 2076, 2112
BbvI GCAGC 2 cut(s) 797, 1210
BceAI ACGGC 4 cut(s) 1591, 1696, 1920, 1971
BciT130I CCWGG 3 cut(s) 839, 1658, 1676
BclI TGATCA 1 cut(s) 1474
BfaI CTAG 3 cut(s) 1490, 1704, 2048
BfmI CTRYAG 1 cut(s) 1182
BglI GCCNNNNNGGC 1 cut(s) 1680
BisI GCNGC 3 cut(s) 811, 1224, 2158
BlsI GCNGC 3 cut(s) 812, 1225, 2159
Bme1390I CCNGG 3 cut(s) 839, 1658, 1676
Bme18I GGWCC 2 cut(s) 1469, 1660
BmeRI GACNNNNNGTC 1 cut(s) 2250
BmeT110I CYCGRG 1 cut(s) 1203
BmgT120I GGNCC 5 cut(s) 322, 1206, 1469, 1660, 1672
BmiI GGNNCC 2 cut(s) 323, 478
BmrFI CCNGG 3 cut(s) 839, 1658, 1676
BmrI ACTGGG 2 cut(s) 1824, 1954
BmsI GCATC 1 cut(s) 84
BmuI ACTGGG 2 cut(s) 1824, 1954
BpiI GAAGAC 3 cut(s) 1601, 1896, 2249
BpmI CTGGAG 1 cut(s) 951
Bpu10I CCTNAGC 3 cut(s) 1406, 2076, 2112
Bsa29I ATCGAT 1 cut(s) 1803
BsaAI YACGTR 1 cut(s) 365
BsaBI GATNNNNATC 1 cut(s) 2032
BsaHI GRCGYC 1 cut(s) 2181
Bsc4I CCNNNNNNNGG 6 cut(s) 226, 392, 1099, 1250, 1613, 1669
Bse1I ACTGG 7 cut(s) 13, 67, 1367, 1499, 1506, 1819, 1949
Bse3DI GCAATG 1 cut(s) 633
Bse8I GATNNNNATC 1 cut(s) 2032
BseBI CCWGG 3 cut(s) 839, 1658, 1676
BseCI ATCGAT 1 cut(s) 1803
BseGI GGATG 4 cut(s) 342, 1417, 1693, 1855
BseJI GATNNNNATC 1 cut(s) 2032
BseLI CCNNNNNNNGG 6 cut(s) 226, 392, 1099, 1250, 1613, 1669
BseMI GCAATG 1 cut(s) 633
BseMII CTCAG 6 cut(s) 129, 2090, 2126, 2158, 2251, 2276
BseNI ACTGG 7 cut(s) 13, 67, 1367, 1499, 1506, 1819, 1949
BseRI GAGGAG 1 cut(s) 1649
BseXI GCAGC 2 cut(s) 797, 1210
BseYI CCCAGC 1 cut(s) 1400
BsgI GTGCAG 1 cut(s) 586
BshFI GGCC 6 cut(s) 5, 324, 1208, 1656, 1674, 2230
BshVI ATCGAT 1 cut(s) 1803
BsiHKCI CYCGRG 1 cut(s) 1203
BsiSI CCGG 1 cut(s) 2231
BslFI GGGAC 3 cut(s) 368, 443, 2125
BslI CCNNNNNNNGG 6 cut(s) 226, 392, 1099, 1250, 1613, 1669
BsmFI GGGAC 3 cut(s) 368, 443, 2125
BsmI GAATGC 2 cut(s) 369, 1143
BsnI GGCC 6 cut(s) 5, 324, 1208, 1656, 1674, 2230
BsoBI CYCGRG 1 cut(s) 1203
Bsp1286I GDGCHC 1 cut(s) 80
Bsp1407I TGTACA 1 cut(s) 210
Bsp143I GATC 6 cut(s) 100, 129, 484, 1474, 1800, 2033
BspACI CCGC 6 cut(s) 1167, 1484, 2158, 2169, 2224, 2295
BspANI GGCC 6 cut(s) 5, 324, 1208, 1656, 1674, 2230
BspCNI CTCAG 6 cut(s) 130, 2089, 2125, 2157, 2250, 2277
BspDI ATCGAT 1 cut(s) 1803
BspHI TCATGA 1 cut(s) 541
BspLI GGNNCC 2 cut(s) 323, 478
BspPI GGATC 2 cut(s) 137, 2028
BspQI GCTCTTC 1 cut(s) 952
BsrBI CCGCTC 1 cut(s) 2224
BsrDI GCAATG 1 cut(s) 633
BsrGI TGTACA 1 cut(s) 210
BsrI ACTGG 7 cut(s) 13, 67, 1367, 1499, 1506, 1819, 1949
BssMI GATC 6 cut(s) 100, 129, 484, 1474, 1800, 2033
BssNI GRCGYC 1 cut(s) 2181
BssSI CACGAG 1 cut(s) 696
Bst2BI CACGAG 1 cut(s) 696
Bst2UI CCWGG 3 cut(s) 839, 1658, 1676
Bst4CI ACNGT 4 cut(s) 172, 1352, 1751, 2301
Bst6I CTCTTC 3 cut(s) 812, 952, 2126
BstACI GRCGYC 1 cut(s) 2181
BstAUI TGTACA 1 cut(s) 210
BstBAI YACGTR 1 cut(s) 365
BstC8I GCNNGC 4 cut(s) 884, 1141, 1364, 1744
BstDEI CTNAG 9 cut(s) 138, 266, 1406, 1457, 2076, 2112, 2144, 2237, 2285
BstF5I GGATG 4 cut(s) 342, 1417, 1693, 1855
BstKTI GATC 6 cut(s) 103, 132, 487, 1477, 1803, 2036
BstMBI GATC 6 cut(s) 100, 129, 484, 1474, 1800, 2033
BstMWI GCNNNNNNNGC 3 cut(s) 755, 1246, 1680
BstNI CCWGG 3 cut(s) 839, 1658, 1676
BstNSI RCATGY 4 cut(s) 234, 1114, 1167, 1366
BstSCI CCNGG 3 cut(s) 837, 1656, 1674
BstSFI CTRYAG 1 cut(s) 1182
BstV1I GCAGC 2 cut(s) 797, 1210
BstV2I GAAGAC 3 cut(s) 1601, 1896, 2249
BstXI CCANNNNNNTGG 2 cut(s) 845, 1513
Bsu15I ATCGAT 1 cut(s) 1803
BsuRI GGCC 6 cut(s) 5, 324, 1208, 1656, 1674, 2230
BsuTUI ATCGAT 1 cut(s) 1803
BtsCI GGATG 4 cut(s) 342, 1417, 1693, 1855
BtsI GCAGTG 2 cut(s) 304, 1244
BtsIMutI CAGTG 7 cut(s) 6, 168, 304, 1244, 1506, 1513, 1942
Cac8I GCNNGC 4 cut(s) 884, 1141, 1364, 1744
CaiI CAGNNNCTG 1 cut(s) 252
CciI TCATGA 1 cut(s) 541
Cfr13I GGNCC 5 cut(s) 322, 1206, 1469, 1660, 1672
ClaI ATCGAT 1 cut(s) 1803
CseI GACGC 1 cut(s) 1733
Csp6I GTAC 5 cut(s) 211, 572, 986, 1161, 1539
CspCI CAANNNNNGTGG 2 cut(s) 346, 381
CviQI GTAC 5 cut(s) 211, 572, 986, 1161, 1539
DdeI CTNAG 9 cut(s) 138, 266, 1406, 1457, 2076, 2112, 2144, 2237, 2285
DpnI GATC 6 cut(s) 102, 131, 486, 1476, 1802, 2035
DpnII GATC 6 cut(s) 100, 129, 484, 1474, 1800, 2033
DriI GACNNNNNGTC 1 cut(s) 2250
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 812, 952, 2126
Eam1105I GACNNNNNGTC 1 cut(s) 2250
EarI CTCTTC 3 cut(s) 812, 952, 2126
Eco24I GRGCYC 1 cut(s) 80
Eco32I GATATC 1 cut(s) 205
Eco47I GGWCC 2 cut(s) 1469, 1660
Eco88I CYCGRG 1 cut(s) 1203
EcoO109I RGGNCCY 1 cut(s) 1672
EcoRII CCWGG 3 cut(s) 837, 1656, 1674
EcoRV GATATC 1 cut(s) 205
EcoT22I ATGCAT 1 cut(s) 1364
EcoT38I GRGCYC 1 cut(s) 80
FalI AAGNNNNNCTT 2 cut(s) 1113, 1145
FaqI GGGAC 3 cut(s) 368, 443, 2125
FauNDI CATATG 1 cut(s) 1628
FbaI TGATCA 1 cut(s) 1474
FblI GTMKAC 2 cut(s) 952, 2260
Fnu4HI GCNGC 3 cut(s) 811, 1224, 2158
FokI GGATG 4 cut(s) 349, 1424, 1700, 1862
FriOI GRGCYC 1 cut(s) 80
Fsp4HI GCNGC 3 cut(s) 811, 1224, 2158
FspBI CTAG 3 cut(s) 1490, 1704, 2048
GluI GCNGC 3 cut(s) 811, 1224, 2158
GsaI CCCAGC 1 cut(s) 1404
GsuI CTGGAG 1 cut(s) 951
HaeIII GGCC 6 cut(s) 5, 324, 1208, 1656, 1674, 2230
HapII CCGG 1 cut(s) 2231
HgaI GACGC 1 cut(s) 1733
Hin1I GRCGYC 1 cut(s) 2181
HincII GTYRAC 1 cut(s) 953
HindII GTYRAC 1 cut(s) 953
HindIII AAGCTT 1 cut(s) 1238
HpaII CCGG 1 cut(s) 2231
HphI GGTGA 4 cut(s) 1357, 1427, 1763, 2288
Hpy166II GTNNAC 7 cut(s) 848, 953, 1348, 1711, 1909, 1968, 2261
Hpy188III TCNNGA 9 cut(s) 175, 242, 334, 542, 1116, 1545, 1877, 2089, 2239
Hpy8I GTNNAC 7 cut(s) 848, 953, 1348, 1711, 1909, 1968, 2261
Hpy99I CGWCG 7 cut(s) 957, 1606, 1612, 1751, 1889, 1941, 2183
HpyAV CCTTC 6 cut(s) 637, 1011, 1093, 1572, 1801, 2264
HpyCH4III ACNGT 4 cut(s) 172, 1352, 1751, 2301
HpyCH4IV ACGT 5 cut(s) 364, 618, 1835, 2181, 2291
HpyF10VI GCNNNNNNNGC 3 cut(s) 755, 1246, 1680
HpyF3I CTNAG 9 cut(s) 138, 266, 1406, 1457, 2076, 2112, 2144, 2237, 2285
HpySE526I ACGT 5 cut(s) 364, 618, 1835, 2181, 2291
Hsp92I GRCGYC 1 cut(s) 2181
Ksp22I TGATCA 1 cut(s) 1474
Kzo9I GATC 6 cut(s) 100, 129, 484, 1474, 1800, 2033
LguI GCTCTTC 1 cut(s) 952
LmnI GCTCC 2 cut(s) 482, 1447
Lsp1109I GCAGC 2 cut(s) 797, 1210
LweI GCATC 1 cut(s) 84
MaeI CTAG 3 cut(s) 1490, 1704, 2048
MaeII ACGT 5 cut(s) 364, 618, 1835, 2181, 2291
MaeIII GTNAC 3 cut(s) 360, 1034, 1501
MalI GATC 6 cut(s) 102, 131, 486, 1476, 1802, 2035
MbiI CCGCTC 1 cut(s) 2224
MboI GATC 6 cut(s) 100, 129, 484, 1474, 1800, 2033
MhlI GDGCHC 1 cut(s) 80
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 520, 836, 2120, 2219
MmeI TCCRAC 5 cut(s) 34, 1418, 1827, 2187, 2234
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 1364
MroXI GAANNNNTTC 1 cut(s) 1050
MscI TGGCCA 1 cut(s) 5
MseI TTAA 8 cut(s) 398, 438, 612, 657, 1304, 1386, 1926, 2186
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 1 cut(s) 2231
MspR9I CCNGG 3 cut(s) 839, 1658, 1676
Mva1269I GAATGC 2 cut(s) 369, 1143
MvaI CCWGG 3 cut(s) 839, 1658, 1676
MwoI GCNNNNNNNGC 3 cut(s) 755, 1246, 1680
NdeI CATATG 1 cut(s) 1628
NdeII GATC 6 cut(s) 100, 129, 484, 1474, 1800, 2033
NlaIV GGNNCC 2 cut(s) 323, 478
NmeAIII GCCGAG 2 cut(s) 206, 211
NmuCI GTSAC 1 cut(s) 1501
NsiI ATGCAT 1 cut(s) 1364
NspI RCATGY 4 cut(s) 234, 1114, 1167, 1366
PaeI GCATGC 1 cut(s) 1366
PagI TCATGA 1 cut(s) 541
PciI ACATGT 1 cut(s) 1110
PciSI GCTCTTC 1 cut(s) 952
PcsI WCGNNNNNNNCGW 1 cut(s) 1607
PctI GAATGC 2 cut(s) 369, 1143
PdmI GAANNNNTTC 1 cut(s) 1050
PfeI GAWTC 7 cut(s) 238, 276, 666, 704, 1585, 1644, 1754
PflFI GACNNNGTC 1 cut(s) 1600
PflMI CCANNNNNTGG 2 cut(s) 392, 1250
PkrI GCNGC 3 cut(s) 812, 1225, 2159
PleI GAGTC 4 cut(s) 520, 835, 2120, 2218
PpsI GAGTC 4 cut(s) 520, 835, 2120, 2218
Ppu21I YACGTR 1 cut(s) 365
PscI ACATGT 1 cut(s) 1110
PshBI ATTAAT 1 cut(s) 1304
PsiI TTATAA 2 cut(s) 722, 968
Psp6I CCWGG 3 cut(s) 837, 1656, 1674
PspFI CCCAGC 1 cut(s) 1400
PspGI CCWGG 3 cut(s) 837, 1656, 1674
PspN4I GGNNCC 2 cut(s) 323, 478
PspPI GGNCC 5 cut(s) 322, 1206, 1469, 1660, 1672
PstNI CAGNNNCTG 1 cut(s) 252
PsyI GACNNNGTC 1 cut(s) 1600
RsaI GTAC 5 cut(s) 212, 573, 987, 1162, 1540
RsaNI GTAC 5 cut(s) 211, 572, 986, 1161, 1539
SalI GTCGAC 1 cut(s) 951
SapI GCTCTTC 1 cut(s) 952
SaqAI TTAA 8 cut(s) 398, 438, 612, 657, 1304, 1386, 1926, 2186
SatI GCNGC 3 cut(s) 811, 1224, 2158
Sau3AI GATC 6 cut(s) 100, 129, 484, 1474, 1800, 2033
Sau96I GGNCC 5 cut(s) 322, 1206, 1469, 1660, 1672
SchI GAGTC 4 cut(s) 520, 836, 2120, 2219
ScrFI CCNGG 3 cut(s) 839, 1658, 1676
SduI GDGCHC 1 cut(s) 80
SfaNI GCATC 1 cut(s) 84
SfcI CTRYAG 1 cut(s) 1182
SinI GGWCC 2 cut(s) 1469, 1660
SphI GCATGC 1 cut(s) 1366
SsiI CCGC 6 cut(s) 1167, 1484, 2158, 2169, 2224, 2295
SspI AATATT 2 cut(s) 995, 1390
SspMI CTAG 3 cut(s) 1490, 1704, 2048
StyD4I CCNGG 3 cut(s) 837, 1656, 1674
TaaI ACNGT 4 cut(s) 172, 1352, 1751, 2301
TaiI ACGT 5 cut(s) 367, 621, 1838, 2184, 2294
TaqII GACCGA 1 cut(s) 1677
TatI WGTACW 3 cut(s) 210, 985, 1538
TauI GCSGC 1 cut(s) 2160
TfiI GAWTC 7 cut(s) 238, 276, 666, 704, 1585, 1644, 1754
Tru1I TTAA 8 cut(s) 398, 438, 612, 657, 1304, 1386, 1926, 2186
Tru9I TTAA 8 cut(s) 398, 438, 612, 657, 1304, 1386, 1926, 2186
TscAI CASTG 7 cut(s) 13, 175, 311, 1251, 1506, 1513, 1949
TseFI GTSAC 1 cut(s) 1501
TseI GCWGC 2 cut(s) 810, 1223
Tsp45I GTSAC 1 cut(s) 1501
TspDTI ATGAA 7 cut(s) 312, 467, 530, 622, 744, 1363, 1574
TspRI CASTG 7 cut(s) 13, 175, 311, 1251, 1506, 1513, 1949
Tth111I GACNNNGTC 1 cut(s) 1600
Van91I CCANNNNNTGG 2 cut(s) 392, 1250
VpaK11BI GGWCC 2 cut(s) 1469, 1660
VspI ATTAAT 1 cut(s) 1304
XapI RAATTY 4 cut(s) 566, 920, 1776, 1922
XceI RCATGY 4 cut(s) 234, 1114, 1167, 1366
XmiI GTMKAC 2 cut(s) 952, 2260
XmnI GAANNNNTTC 1 cut(s) 1050
XspI CTAG 3 cut(s) 1490, 1704, 2048
ZraI GACGTC 1 cut(s) 2182
Zsp2I ATGCAT 1 cut(s) 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.