Prupe.6G046900_v2.0.a1
WRKY Family

WRKY transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
3376693 .. 3379837
3145 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G046900.1

Sequence Viewer

Length: 1755 bp
ATGGCCTCCTCTTCTGGGAGCTTAGACACTTCTGCAAATTCACACCCAACCTTCACTTTCTCGACGCACCCGTTCATGACCACCTCCTTCTCTGATCTCTTAGCCTCTGGCACAGATGAAGACCCCAGCACCAACACCACAGCTCGACATGTTGGCCATGGCGGGCTAGCAGATCGAATAGCAGAACGTACTGGGTCTGGTGTGCCCAAATTCAAGTCTCTTCCTCCTCCTTCGCTGCCCATTTCTCCTCCCTCCGTTTCTCCCTCTTCTTACTTCGCAATCCCAGCTGGGTTGAGCCCAGCTGAGCTTCTTGACTCTCCTGTCCTCCTAAGCACTTCAAACATTCTTCCATCTCCAACTACCGGAAGTTTTGCAGCTCAGGCCTTTTGGAAGGCCAATTCTGGAAACAACCAGCAGATTGTTAAACAGGAAAGCAAGAACTACTCAGATTTCTCTTTCCAAACACAAACAAGACCCCTCACTTCATCATCAACAATGTTTCAATCTACTAACAGCACAATTCAAACTGCACAAGAACAGGCATGGAGTAACAGTTACTTTCAGGCACAAGAACCCCAAAAGCAAGATGATTTTTCCTCAGGGAAGAGTATGGTGAAACCTGAATATGGTTCTGTGCAGAGCTTCTCATCTGGAATGGCCACCAATATCCAAAATATTAGTCAGGCCAATGGTGGTTTCCAATCTGAGTATAGCAACTACAACCACCAACAATCTCAGACCTTGAGCAGGAAGTCAGATGATGGGTTCAATTGGAGAAAATATGGTCAAAAACAAGTGAAGGGAAGTGAAAATCCAAGAAGCTATTACAAGTGTACTTACCCCAATTGCCCAACTAAGAAGAAAGTAGAGAGGTCTTTGGATGGGCAAATCACTGAGATAGTTTACAAGGGCAACCATAACCATCCCAAGCCACAGAATACTAGAAGATCATCATCAAATTCTTCTCATGCAATTCAGGCTTCTAATCCCAACACCAATGAAATCCCAGATCAGTCTTTTGCCAATCATGGTAACTCACAAATGGATTCCATTGGAACTCCAGAAAATTCATCCATTTCGATGGGAGATGATGATTTTGAACAGAGTTCTCAGAAAAGCAAGTCAGGAGGAGGGGATGAATTTGATGAAGATGAACCTAATGCCAAAAGATGGAAAAAGGAAGTTGATAATGAAGGTATTTCAGCTCCTGGGAGCAGAACAGTGAGAGAGCCTAGAGTTGTAGTTCAAACAACCAGTGATATTGATATTCTAGATGATGGGTACAGATGGAGGAAGTACGGGCAGAAGGTGGTAAAGGGCAATCCAAATCCAAGGAGCTACTACAAGTGCACAAATCCAGGATGTCCAGTGAGAAAGCATGTTGAGAGAGCTTCTCATGATCTTAGAGCTGTGATCACAACCTATGAAGGAAAGCACAACCATGATGTTCCGGCAGCTCGTGGCAGCGGCAGCCATGCTTCTGTCAATAGGGCTCTACCAAACAACAACAACAATGTAGCCACAGCAATGAGGCCTGTGGCCCATCAAACTAACAACTTAAGGCAACAAACATCAGAAGGGCAACAAGCACCCTTTACCCTAGAGATGTTGCAGAGCCCCGAGAGTTTCGGATTTGCAGGGTTTGATAACTCTATGGGGTTATACATGAACCAAGCGCAGCTCAATGAGAACATGTTTTCTAAAACCAAGGAGGAGCCAAGAGATGATGCATTTTTTGAATCATTGCTATGCTGA

Protein Analysis

585

Amino Acids

64.13

Weight (kDa)

6.58

Isoelectric Point (pI)

53.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 320
AccB7I CCANNNNNTGG 1 cut(s) 1170
AciI CCGC 2 cut(s) 162, 1467
AcoI YGGCCR 2 cut(s) 154, 657
AcsI RAATTY 5 cut(s) 37, 209, 958, 1066, 1139
AfaI GTAC 4 cut(s) 190, 835, 1283, 1298
AfiI CCNNNNNNNGG 5 cut(s) 15, 362, 626, 747, 1170
AflII CTTAAG 1 cut(s) 1558
AflIII ACRYGT 2 cut(s) 148, 1692
AgsI TTSAA 8 cut(s) 214, 339, 503, 524, 769, 1100, 1247, 1739
AjnI CCWGG 2 cut(s) 1207, 1357
AjuI GAANNNNNNNTTGG 2 cut(s) 680, 712
Alw21I GWGCWC 1 cut(s) 1352
Alw26I GTCTC 1 cut(s) 222
Alw44I GTGCAC 1 cut(s) 1348
AlwNI CAGNNNCTG 1 cut(s) 1208
Ama87I CYCGRG 1 cut(s) 1619
AoxI GGCC 8 cut(s) 3, 154, 381, 393, 657, 684, 1532, 1539
ApaLI GTGCAC 1 cut(s) 1348
ApeKI GCWGC 6 cut(s) 235, 374, 1454, 1464, 1470, 1678
ApoI RAATTY 5 cut(s) 37, 209, 958, 1066, 1139
ArsI GACNNNNNNTTYG 2 cut(s) 664, 696
AspLEI GCGC 1 cut(s) 1678
AspS9I GGNCC 1 cut(s) 1540
AsuHPI GGTGA 1 cut(s) 625
AsuNHI GCTAGC 1 cut(s) 166
AvaI CYCGRG 1 cut(s) 1619
AxyI CCTNAGG 1 cut(s) 598
BaeGI GKGCMC 2 cut(s) 207, 1352
BalI TGGCCA 2 cut(s) 156, 659
BanII GRGCYC 3 cut(s) 299, 1495, 1619
BauI CACGAG 1 cut(s) 1458
BbsI GAAGAC 1 cut(s) 126
Bbv12I GWGCWC 1 cut(s) 1352
BbvI GCAGC 6 cut(s) 222, 386, 1466, 1476, 1482, 1690
BccI CCATC 9 cut(s) 358, 755, 875, 930, 1075, 1164, 1271, 1281, 1551
BciT130I CCWGG 2 cut(s) 1209, 1359
BclI TGATCA 1 cut(s) 1413
BcoDI GTCTC 1 cut(s) 222
BfaI CTAG 5 cut(s) 167, 942, 1233, 1271, 1601
BfrI CTTAAG 1 cut(s) 1558
BisI GCNGC 7 cut(s) 236, 375, 1455, 1465, 1468, 1471, 1679
BlpI GCTNAGC 1 cut(s) 303
BlsI GCNGC 7 cut(s) 237, 376, 1456, 1466, 1469, 1472, 1680
Bme1390I CCNGG 2 cut(s) 1209, 1359
BmeT110I CYCGRG 1 cut(s) 1619
BmgT120I GGNCC 1 cut(s) 1540
BmiI GGNNCC 1 cut(s) 1716
BmrFI CCNGG 2 cut(s) 1209, 1359
BmrI ACTGGG 1 cut(s) 201
BmsI GCATC 1 cut(s) 1717
BmtI GCTAGC 1 cut(s) 170
BmuI ACTGGG 1 cut(s) 201
BpiI GAAGAC 1 cut(s) 126
BplI GAGNNNNNCTC 2 cut(s) 1378, 1410
BpmI CTGGAG 1 cut(s) 1044
Bpu10I CCTNAGC 2 cut(s) 329, 378
Bpu1102I GCTNAGC 1 cut(s) 303
BpuEI CTTGAG 1 cut(s) 763
BsaBI GATNNNNATC 1 cut(s) 952
BsaJI CCNNGG 4 cut(s) 157, 1208, 1331, 1707
BsaWI WCCGGW 1 cut(s) 362
BsaXI ACNNNNNCTCC 2 cut(s) 538, 568
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 362, 626, 747, 1170
Bse1I ACTGG 3 cut(s) 196, 1254, 1367
Bse21I CCTNAGG 1 cut(s) 598
Bse3DI GCAATG 2 cut(s) 1533, 1742
Bse8I GATNNNNATC 1 cut(s) 952
BseBI CCWGG 2 cut(s) 1209, 1359
BseDI CCNNGG 4 cut(s) 157, 1208, 1331, 1707
BseGI GGATG 5 cut(s) 886, 922, 1070, 1141, 1367
BseJI GATNNNNATC 1 cut(s) 952
BseLI CCNNNNNNNGG 5 cut(s) 15, 362, 626, 747, 1170
BseMI GCAATG 2 cut(s) 1533, 1742
BseMII CTCAG 8 cut(s) 294, 392, 459, 612, 696, 749, 885, 1124
BseNI ACTGG 3 cut(s) 196, 1254, 1367
BseRI GAGGAG 4 cut(s) 216, 237, 1143, 1727
BseSI GKGCMC 2 cut(s) 207, 1352
BseXI GCAGC 6 cut(s) 222, 386, 1466, 1476, 1482, 1690
BseYI CCCAGC 4 cut(s) 125, 283, 287, 298
BsgI GTGCAG 2 cut(s) 513, 656
BshFI GGCC 8 cut(s) 5, 156, 383, 395, 659, 686, 1534, 1541
BsiHKAI GWGCWC 1 cut(s) 1352
BsiHKCI CYCGRG 1 cut(s) 1619
BsiSI CCGG 2 cut(s) 363, 1451
BslI CCNNNNNNNGG 5 cut(s) 15, 362, 626, 747, 1170
BsmAI GTCTC 1 cut(s) 222
BsnI GGCC 8 cut(s) 5, 156, 383, 395, 659, 686, 1534, 1541
BsoBI CYCGRG 1 cut(s) 1619
Bsp1286I GDGCHC 5 cut(s) 207, 299, 1352, 1495, 1619
Bsp143I GATC 6 cut(s) 94, 172, 947, 1009, 1399, 1413
Bsp1720I GCTNAGC 1 cut(s) 303
Bsp19I CCATGG 1 cut(s) 157
BspACI CCGC 2 cut(s) 162, 1467
BspANI GGCC 8 cut(s) 5, 156, 383, 395, 659, 686, 1534, 1541
BspCNI CTCAG 8 cut(s) 295, 391, 458, 611, 697, 748, 886, 1123
BspHI TCATGA 2 cut(s) 75, 1396
BspLI GGNNCC 1 cut(s) 1716
BspOI GCTAGC 1 cut(s) 170
BspTI CTTAAG 1 cut(s) 1558
BsrDI GCAATG 2 cut(s) 1533, 1742
BsrI ACTGG 3 cut(s) 196, 1254, 1367
BssECI CCNNGG 4 cut(s) 157, 1208, 1331, 1707
BssMI GATC 6 cut(s) 94, 172, 947, 1009, 1399, 1413
BssSI CACGAG 1 cut(s) 1458
BssT1I CCWWGG 3 cut(s) 157, 1331, 1707
Bst2BI CACGAG 1 cut(s) 1458
Bst2UI CCWGG 2 cut(s) 1209, 1359
Bst4CI ACNGT 2 cut(s) 554, 1222
Bst6I CTCTTC 4 cut(s) 16, 225, 271, 599
BstAFI CTTAAG 1 cut(s) 1558
BstC8I GCNNGC 2 cut(s) 164, 168
BstDSI CCRYGG 1 cut(s) 157
BstENI CCTNNNNNAGG 1 cut(s) 745
BstF5I GGATG 5 cut(s) 886, 922, 1070, 1141, 1367
BstHHI GCGC 1 cut(s) 1678
BstKTI GATC 6 cut(s) 97, 175, 950, 1012, 1402, 1416
BstMAI GTCTC 1 cut(s) 222
BstMBI GATC 6 cut(s) 94, 172, 947, 1009, 1399, 1413
BstMWI GCNNNNNNNGC 4 cut(s) 284, 380, 977, 1470
BstNI CCWGG 2 cut(s) 1209, 1359
BstNSI RCATGY 3 cut(s) 152, 1382, 1696
BstSCI CCNGG 2 cut(s) 1207, 1357
BstSLI GKGCMC 2 cut(s) 207, 1352
BstV1I GCAGC 6 cut(s) 222, 386, 1466, 1476, 1482, 1690
BstV2I GAAGAC 1 cut(s) 126
BstXI CCANNNNNNTGG 1 cut(s) 1081
Bsu36I CCTNAGG 1 cut(s) 598
BsuRI GGCC 8 cut(s) 5, 156, 383, 395, 659, 686, 1534, 1541
BtgI CCRYGG 1 cut(s) 157
BtsCI GGATG 5 cut(s) 886, 922, 1070, 1141, 1367
BtsIMutI CAGTG 4 cut(s) 891, 1227, 1261, 1374
Cac8I GCNNGC 2 cut(s) 164, 168
CaiI CAGNNNCTG 1 cut(s) 1208
CciI TCATGA 2 cut(s) 75, 1396
CfoI GCGC 1 cut(s) 1678
Cfr13I GGNCC 1 cut(s) 1540
CseI GACGC 1 cut(s) 73
Csp6I GTAC 4 cut(s) 189, 834, 1282, 1297
CviQI GTAC 4 cut(s) 189, 834, 1282, 1297
DpnI GATC 6 cut(s) 96, 174, 949, 1011, 1401, 1415
DpnII GATC 6 cut(s) 94, 172, 947, 1009, 1399, 1413
DrdI GACNNNNNNGTC 1 cut(s) 320
DseDI GACNNNNNNGTC 1 cut(s) 320
EaeI YGGCCR 2 cut(s) 154, 657
Eam1104I CTCTTC 4 cut(s) 16, 225, 271, 599
EarI CTCTTC 4 cut(s) 16, 225, 271, 599
Eco130I CCWWGG 3 cut(s) 157, 1331, 1707
Eco147I AGGCCT 2 cut(s) 383, 1534
Eco24I GRGCYC 3 cut(s) 299, 1495, 1619
Eco81I CCTNAGG 1 cut(s) 598
Eco88I CYCGRG 1 cut(s) 1619
EcoNI CCTNNNNNAGG 1 cut(s) 745
EcoRII CCWGG 2 cut(s) 1207, 1357
EcoT14I CCWWGG 3 cut(s) 157, 1331, 1707
EcoT22I ATGCAT 1 cut(s) 1732
EcoT38I GRGCYC 3 cut(s) 299, 1495, 1619
ErhI CCWWGG 3 cut(s) 157, 1331, 1707
FauI CCCGC 1 cut(s) 155
FbaI TGATCA 1 cut(s) 1413
Fnu4HI GCNGC 7 cut(s) 236, 375, 1455, 1465, 1468, 1471, 1679
FokI GGATG 5 cut(s) 893, 909, 1057, 1148, 1374
FriOI GRGCYC 3 cut(s) 299, 1495, 1619
Fsp4HI GCNGC 7 cut(s) 236, 375, 1455, 1465, 1468, 1471, 1679
FspBI CTAG 5 cut(s) 167, 942, 1233, 1271, 1601
GlaI GCGC 1 cut(s) 1677
GluI GCNGC 7 cut(s) 236, 375, 1455, 1465, 1468, 1471, 1679
GsaI CCCAGC 4 cut(s) 129, 287, 291, 302
GsuI CTGGAG 1 cut(s) 1044
HaeIII GGCC 8 cut(s) 5, 156, 383, 395, 659, 686, 1534, 1541
HapII CCGG 2 cut(s) 363, 1451
HgaI GACGC 1 cut(s) 73
HhaI GCGC 1 cut(s) 1678
Hin6I GCGC 1 cut(s) 1676
HinP1I GCGC 1 cut(s) 1676
HinfI GANTC 3 cut(s) 314, 1046, 1739
HpaII CCGG 2 cut(s) 363, 1451
HphI GGTGA 1 cut(s) 625
Hpy166II GTNNAC 3 cut(s) 834, 904, 1350
Hpy188I TCNGA 8 cut(s) 94, 448, 706, 738, 757, 1113, 1576, 1631
Hpy188III TCNNGA 9 cut(s) 61, 76, 311, 402, 651, 1061, 1125, 1271, 1397
Hpy8I GTNNAC 3 cut(s) 834, 904, 1350
Hpy99I CGWCG 1 cut(s) 67
HpyAV CCTTC 9 cut(s) 61, 97, 240, 385, 793, 1187, 1300, 1421, 1571
HpyCH4III ACNGT 2 cut(s) 554, 1222
HpyCH4IV ACGT 1 cut(s) 187
HpyCH4V TGCA 9 cut(s) 35, 374, 530, 637, 971, 1350, 1612, 1637, 1730
HpyF10VI GCNNNNNNNGC 4 cut(s) 284, 380, 977, 1470
HpySE526I ACGT 1 cut(s) 187
HspAI GCGC 1 cut(s) 1676
Ksp22I TGATCA 1 cut(s) 1413
Kzo9I GATC 6 cut(s) 94, 172, 947, 1009, 1399, 1413
LmnI GCTCC 5 cut(s) 18, 1210, 1212, 1335, 1714
Lsp1109I GCAGC 6 cut(s) 222, 386, 1466, 1476, 1482, 1690
LweI GCATC 1 cut(s) 1717
MaeI CTAG 5 cut(s) 167, 942, 1233, 1271, 1601
MaeII ACGT 1 cut(s) 187
MaeIII GTNAC 3 cut(s) 548, 554, 1031
MalI GATC 6 cut(s) 96, 174, 949, 1011, 1401, 1415
MboI GATC 6 cut(s) 94, 172, 947, 1009, 1399, 1413
MfeI CAATTG 2 cut(s) 769, 844
MhlI GDGCHC 5 cut(s) 207, 299, 1352, 1495, 1619
MlsI TGGCCA 2 cut(s) 156, 659
MluNI TGGCCA 2 cut(s) 156, 659
MlyI GAGTC 1 cut(s) 308
MmeI TCCRAC 1 cut(s) 380
Mox20I TGGCCA 2 cut(s) 156, 659
Mph1103I ATGCAT 1 cut(s) 1732
MscI TGGCCA 2 cut(s) 156, 659
MseI TTAA 2 cut(s) 423, 1559
MslI CAYNNNNRTG 4 cut(s) 1079, 1440, 1526, 1747
Msp20I TGGCCA 2 cut(s) 156, 659
MspA1I CMGCKG 3 cut(s) 287, 302, 1467
MspCI CTTAAG 1 cut(s) 1558
MspI CCGG 2 cut(s) 363, 1451
MspR9I CCNGG 2 cut(s) 1209, 1359
MunI CAATTG 2 cut(s) 769, 844
MvaI CCWGG 2 cut(s) 1209, 1359
MwoI GCNNNNNNNGC 4 cut(s) 284, 380, 977, 1470
NcoI CCATGG 1 cut(s) 157
NdeII GATC 6 cut(s) 94, 172, 947, 1009, 1399, 1413
NheI GCTAGC 1 cut(s) 166
NlaIV GGNNCC 1 cut(s) 1716
NsiI ATGCAT 1 cut(s) 1732
NspI RCATGY 3 cut(s) 152, 1382, 1696
PagI TCATGA 2 cut(s) 75, 1396
PceI AGGCCT 2 cut(s) 383, 1534
PciI ACATGT 2 cut(s) 148, 1692
PcsI WCGNNNNNNNCGW 1 cut(s) 68
PfeI GAWTC 2 cut(s) 1046, 1739
PflMI CCANNNNNTGG 1 cut(s) 1170
PfoI TCCNGGA 1 cut(s) 1357
PkrI GCNGC 7 cut(s) 237, 376, 1456, 1466, 1469, 1472, 1680
PleI GAGTC 1 cut(s) 308
PpsI GAGTC 1 cut(s) 308
PscI ACATGT 2 cut(s) 148, 1692
Psp6I CCWGG 2 cut(s) 1207, 1357
PspFI CCCAGC 4 cut(s) 125, 283, 287, 298
PspGI CCWGG 2 cut(s) 1207, 1357
PspN4I GGNNCC 1 cut(s) 1716
PspPI GGNCC 1 cut(s) 1540
PstNI CAGNNNCTG 1 cut(s) 1208
PvuII CAGCTG 2 cut(s) 287, 302
RsaI GTAC 4 cut(s) 190, 835, 1283, 1298
RsaNI GTAC 4 cut(s) 189, 834, 1282, 1297
RseI CAYNNNNRTG 4 cut(s) 1079, 1440, 1526, 1747
SaqAI TTAA 2 cut(s) 423, 1559
SatI GCNGC 7 cut(s) 236, 375, 1455, 1465, 1468, 1471, 1679
Sau3AI GATC 6 cut(s) 94, 172, 947, 1009, 1399, 1413
Sau96I GGNCC 1 cut(s) 1540
SchI GAGTC 1 cut(s) 308
ScrFI CCNGG 2 cut(s) 1209, 1359
SduI GDGCHC 5 cut(s) 207, 299, 1352, 1495, 1619
SfaNI GCATC 1 cut(s) 1717
SmiMI CAYNNNNRTG 4 cut(s) 1079, 1440, 1526, 1747
SmlI CTYRAG 2 cut(s) 742, 1558
SmoI CTYRAG 2 cut(s) 742, 1558
SseBI AGGCCT 2 cut(s) 383, 1534
SsiI CCGC 2 cut(s) 162, 1467
SspI AATATT 1 cut(s) 676
SspMI CTAG 5 cut(s) 167, 942, 1233, 1271, 1601
StuI AGGCCT 2 cut(s) 383, 1534
StyD4I CCNGG 2 cut(s) 1207, 1357
StyI CCWWGG 3 cut(s) 157, 1331, 1707
TaaI ACNGT 2 cut(s) 554, 1222
TaiI ACGT 1 cut(s) 190
TaqI TCGA 4 cut(s) 62, 145, 175, 1079
TatI WGTACW 1 cut(s) 833
TauI GCSGC 1 cut(s) 1470
TfiI GAWTC 2 cut(s) 1046, 1739
Tru1I TTAA 2 cut(s) 423, 1559
Tru9I TTAA 2 cut(s) 423, 1559
TscAI CASTG 4 cut(s) 898, 1227, 1261, 1374
TseI GCWGC 6 cut(s) 235, 374, 1454, 1464, 1470, 1678
TspGWI ACGGA 1 cut(s) 244
TspRI CASTG 4 cut(s) 898, 1227, 1261, 1374
Van91I CCANNNNNTGG 1 cut(s) 1170
Vha464I CTTAAG 1 cut(s) 1558
VneI GTGCAC 1 cut(s) 1348
XagI CCTNNNNNAGG 1 cut(s) 745
XapI RAATTY 5 cut(s) 37, 209, 958, 1066, 1139
XbaI TCTAGA 1 cut(s) 1270
XceI RCATGY 3 cut(s) 152, 1382, 1696
XspI CTAG 5 cut(s) 167, 942, 1233, 1271, 1601
Zsp2I ATGCAT 1 cut(s) 1732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.