Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0001456

Physical Location & Seq

Genomic Coordinates Reverse (-)

71821525 .. 71826553

Gene Structure 5029 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG514700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGCCTCCTCTTCCGGGAGCTTAGACACCTCCGCAAATTCTCACCCGAGCAACTTCACCTTCTCCACCCACCCATTCATGACCACCTCCTTCTCCGACCTCTTATCCTCGGGCGCCGACACCACAAACCCAATAGCCACCGCAACCCGAAACTCCGGGTACGGGTTATCGGATCGTATTGCGGAGCGAACGGGGTCGGGTGTCCCCAAGTTCAAGTCCCTCCCGCCTCCCCAGCTCCCCATTTCGCCTCCCTCTGTTGTGTCTCCCTCTTCCTACTTTGCAATCCCACCTGGGATGAGCCCCGCCGAGCTTCTCGACTCTCCTGTGCTTCTCAGCTCTTCCAACATTCTTCCATCTCCAACTACTGGGAGTTTTGCAGCTCAAGCCATTAATTGGAGGACCAATTCTGGTTCTGGTGCTAACAACAATAACAACAACCGGAGTGTTAAAGAGGAGCACAAGAACTACTCAGATTTCTCTTTCCAAACCCAAACCAGGGCCCCTCCAACTTCATCATCAGCAATTTTCCAATCCTCAAACAGCTCAATTCAGACTGTATGTAATGTGTTTCATGAATTTACTCATAGATCTCCTCTGTTTTTGTTTCTTGACTGGCTTATTTTGGCTAATGTAATTGTTTTGTTCCAGGCACAAGAGCAGGCATGGAATAACTATCTAGGACCTCCCAAACAAGATAACTTTTCTTCAGGGAAGAGTATGGTGAAACCTGAGTATGGTTCTTCAGTGCAGAGCTTCTCTTCTGAAATGGGGACTAATATGCAGAGCAATAACAATGCTCAGCCCAACAGCAGTGGTGGTTTCCAATCAGATCAGTACAGCAACTACAATAACAATAACAACAACAACAACAACAACAACAGCAACAACAACCAGCTGCAATCCCATCAGTGCTTGAACAGGAGATCAGATGACGGGTTCAATTGGAGGAAATATGGCCAGAAACAAGTGAAGGGAAGCGAAAATCCGCGGAGCTATTACAAGTGTACTTATCCGAATTGCCCAACTAAGAAAAAGGTCGAGAGGTCGTTGGATGGACAAATCACCGAGATAGTTTACAAGGGTAATCATAACCATCCCAAGCCACAGAATACTAGAAGGTCGGGTTCATCAGCGGCTTCTTCCCATGCAATCCACGCGTCCAATCACACCACCAATGACATCCCGGATCAGTCTTTGGGCTCTCATGGTAATTCACAAATGGATAACTCCATTGGAACACCGGAGAATTCATCCAATTTTTCAAATGGGGATGATGAGTTTGATCAGAGCTCTCAGAGAAGCAAGTCAGGAGGAGGGGATGAGTATGATGAGGATGAGCCTAATGCCAAAAGATGGAAAAAAGAAGGTGACAATGAATGTATTTCAGCACCTGGGAGTAGAACAGTGAGAGAACCAAGAGTTGTAGTTCAAACAACAAGTGACATTGATATTCTTGATGATGGGTACAGGTGGAGGAAGTATGGTCAGAAAGTAGTAAAGGGCAACCCAAATCCAAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006725 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009403 GO:0009404 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009700 GO:0009889 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010035 GO:0010120 GO:0010200 GO:0010243 GO:0010286 GO:0010468 GO:0010506 GO:0010508 GO:0010556 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019748 GO:0031323 GO:0031325 GO:0031326 GO:0031329 GO:0031331 GO:0033554 GO:0034605 GO:0034641 GO:0042221 GO:0042430 GO:0042435 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044424 GO:0044464 GO:0044550 GO:0046217 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0052314 GO:0052315 GO:0052317 GO:0060255 GO:0065007 GO:0070370 GO:0071704 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

506

Amino Acids

55.45

Weight (kDa)

7.19

Isoelectric Point (pI)

53.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	310 - 366	1.2e-26	WRKY DNA -binding domain
WRKY	PF03106	486 - 506	1.5e-06	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07100 AT5G07100 AT5G07100 AT5G07100 AT5G07100
fragaria_vesca	FvH4_3g39850 FvH4_3g39850 FvH4_3g39850 FvH4_3g39850 FvH4_3g39850 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510
malus_domestica	MD03G1057400.v1.1 MD04G1167700.v1.1 MD06G1115200.v1.1 MD11G1059400.v1.1 MD12G1181000.v1.1
prunus_persica	Prupe.6G046900_v2.0.a1 Prupe.6G286000_v2.0.a1
pyrus_communis	pycom03g04580 pycom04g14890 pycom06g10790 pycom11g04930 pycom12g17060
rosa_chinensis	RchiOBHm_Chr3g0461481 RchiOBHm_Chr5g0071811
rosa_laevigata	RLG00000024931 RLG00000036250
rosa_multiflora	Rmu_sc0002677.1_g000005 Rmu_ssc0000127.1_g000054
rosa_roxburghii	Rroxscaffold_1G00009350 Rroxscaffold_6G00418250 Rroxscaffold_6G00418580
rosa_rugosa	Rorug03G0051000 Rorug03G0051100.1 Rorug05G0414700
rosa_samantha	Rh3AG108800 Rh3BG112700 Rh3CG114200 Rh3DG114300 Rh5AG471000 Rh5BG490700 Rh5CG514700 Rh5DG502000
rosa_wichuraiana	Rw3G009250 Rw5G043770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	113
AccB7I	CCANNNNNTGG	3 cut(s)	365, 393, 1353
AccII	CGCG	2 cut(s)	988, 1157
AciI	CCGC	8 cut(s)	33, 141, 182, 224, 303, 986, 988, 1133
AclWI	GGATC	2 cut(s)	180, 1194
AcoI	YGGCCR	1 cut(s)	955
AcsI	RAATTY	3 cut(s)	37, 575, 1246
AcuI	CTGAAG	2 cut(s)	690, 726
AcyI	GRCGYC	1 cut(s)	114
AfaI	GTAC	4 cut(s)	161, 836, 1006, 1466
AfiI	CCNNNNNNNGG	8 cut(s)	15, 162, 365, 393, 495, 496, 734, 1353
AflIII	ACRYGT	1 cut(s)	1155
AgsI	TTSAA	5 cut(s)	214, 916, 940, 1263, 1430
AjnI	CCWGG	4 cut(s)	289, 494, 645, 1390
Alw21I	GWGCWC	2 cut(s)	459, 1292
Alw26I	GTCTC	1 cut(s)	267
AlwI	GGATC	2 cut(s)	180, 1194
AlwNI	CAGNNNCTG	1 cut(s)	1391
Ama87I	CYCGRG	2 cut(s)	46, 109
AoxI	GGCC	3 cut(s)	3, 498, 955
ApaI	GGGCCC	1 cut(s)	502
ApeKI	GCWGC	2 cut(s)	377, 895
ApoI	RAATTY	3 cut(s)	37, 575, 1246
AseI	ATTAAT	1 cut(s)	390
AspLEI	GCGC	1 cut(s)	116
AspS9I	GGNCC	4 cut(s)	399, 498, 499, 680
AsuC2I	CCSGG	3 cut(s)	16, 157, 1184
AsuHPI	GGTGA	5 cut(s)	35, 49, 733, 1054, 1379
AvaI	CYCGRG	2 cut(s)	46, 109
AvaII	GGWCC	2 cut(s)	399, 680
BaeGI	GKGCMC	1 cut(s)	502
BalI	TGGCCA	1 cut(s)	957
BanI	GGYRCC	1 cut(s)	113
BanII	GRGCYC	4 cut(s)	302, 502, 1202, 1292
Bbv12I	GWGCWC	2 cut(s)	459, 1292
BbvI	GCAGC	2 cut(s)	389, 882
BccI	CCATC	6 cut(s)	361, 912, 1046, 1101, 1347, 1454
BciT130I	CCWGG	4 cut(s)	291, 496, 647, 1392
BclI	TGATCA	1 cut(s)	1282
BcnI	CCSGG	3 cut(s)	16, 157, 1184
BcoDI	GTCTC	1 cut(s)	267
BfaI	CTAG	2 cut(s)	677, 1113
BfoI	RGCGCY	1 cut(s)	117
BglII	AGATCT	1 cut(s)	587
BisI	GCNGC	3 cut(s)	378, 896, 1134
BlpI	GCTNAGC	1 cut(s)	798
BlsI	GCNGC	3 cut(s)	379, 897, 1135
Bme1390I	CCNGG	7 cut(s)	16, 157, 291, 496, 647, 1184, 1392
Bme18I	GGWCC	2 cut(s)	399, 680
BmeT110I	CYCGRG	2 cut(s)	46, 109
BmgT120I	GGNCC	4 cut(s)	399, 498, 499, 680
BmiI	GGNNCC	3 cut(s)	115, 500, 501
BmrFI	CCNGG	7 cut(s)	16, 157, 291, 496, 647, 1184, 1392
BmrI	ACTGGG	1 cut(s)	375
BmuI	ACTGGG	1 cut(s)	375
Bpu1102I	GCTNAGC	1 cut(s)	798
BpuEI	CTTGAG	1 cut(s)	366
BpuMI	CCSGG	3 cut(s)	16, 157, 1184
BsaHI	GRCGYC	1 cut(s)	114
BsaJI	CCNNGG	6 cut(s)	108, 290, 495, 986, 1391, 1514
BsaWI	WCCGGW	2 cut(s)	438, 1240
Bsc4I	CCNNNNNNNGG	8 cut(s)	15, 162, 365, 393, 495, 496, 734, 1353
Bse1I	ACTGG	2 cut(s)	370, 617
BseBI	CCWGG	4 cut(s)	291, 496, 647, 1392
BseDI	CCNNGG	6 cut(s)	108, 290, 495, 986, 1391, 1514
BseGI	GGATG	8 cut(s)	300, 1057, 1093, 1179, 1250, 1276, 1324, 1339
BseLI	CCNNNNNNNGG	8 cut(s)	15, 162, 365, 393, 495, 496, 734, 1353
BseMII	CTCAG	5 cut(s)	346, 483, 720, 812, 1307
BseNI	ACTGG	2 cut(s)	370, 617
BseRI	GAGGAG	3 cut(s)	467, 582, 1326
BseSI	GKGCMC	1 cut(s)	502
BseXI	GCAGC	2 cut(s)	389, 882
BseYI	CCCAGC	1 cut(s)	231
BsgI	GTGCAG	1 cut(s)	767
Bsh1236I	CGCG	2 cut(s)	988, 1157
BshFI	GGCC	3 cut(s)	5, 500, 957
BshNI	GGYRCC	1 cut(s)	113
BsiHKAI	GWGCWC	2 cut(s)	459, 1292
BsiHKCI	CYCGRG	2 cut(s)	46, 109
BsiSI	CCGG	5 cut(s)	15, 156, 439, 1184, 1241
BslFI	GGGAC	3 cut(s)	188, 202, 784
BslI	CCNNNNNNNGG	8 cut(s)	15, 162, 365, 393, 495, 496, 734, 1353
BsmAI	GTCTC	1 cut(s)	267
BsmFI	GGGAC	3 cut(s)	188, 202, 784
BsnI	GGCC	3 cut(s)	5, 500, 957
BsoBI	CYCGRG	2 cut(s)	46, 109
Bsp120I	GGGCCC	1 cut(s)	498
Bsp1286I	GDGCHC	5 cut(s)	302, 459, 502, 1202, 1292
Bsp143I	GATC	6 cut(s)	172, 587, 829, 923, 1186, 1282
Bsp1720I	GCTNAGC	1 cut(s)	798
BspACI	CCGC	8 cut(s)	33, 141, 182, 224, 303, 986, 988, 1133
BspANI	GGCC	3 cut(s)	5, 500, 957
BspCNI	CTCAG	5 cut(s)	345, 482, 721, 811, 1306
BspFNI	CGCG	2 cut(s)	988, 1157
BspHI	TCATGA	2 cut(s)	78, 571
BspLI	GGNNCC	3 cut(s)	115, 500, 501
BspPI	GGATC	2 cut(s)	180, 1194
BspQI	GCTCTTC	1 cut(s)	343
BspT107I	GGYRCC	1 cut(s)	113
BsrI	ACTGG	2 cut(s)	370, 617
BssECI	CCNNGG	6 cut(s)	108, 290, 495, 986, 1391, 1514
BssMI	GATC	6 cut(s)	172, 587, 829, 923, 1186, 1282
BssNI	GRCGYC	1 cut(s)	114
BssT1I	CCWWGG	1 cut(s)	1514
Bst2UI	CCWGG	4 cut(s)	291, 496, 647, 1392
Bst4CI	ACNGT	2 cut(s)	556, 1405
Bst6I	CTCTTC	5 cut(s)	16, 274, 343, 707, 763
BstACI	GRCGYC	1 cut(s)	114
BstC8I	GCNNGC	1 cut(s)	660
BstDEI	CTNAG	7 cut(s)	22, 332, 469, 729, 798, 1026, 1293
BstDSI	CCRYGG	1 cut(s)	986
BstF5I	GGATG	8 cut(s)	300, 1057, 1093, 1179, 1250, 1276, 1324, 1339
BstFNI	CGCG	2 cut(s)	988, 1157
BstH2I	RGCGCY	1 cut(s)	117
BstHHI	GCGC	1 cut(s)	116
BstKTI	GATC	6 cut(s)	175, 590, 832, 926, 1189, 1285
BstMAI	GTCTC	1 cut(s)	267
BstMBI	GATC	6 cut(s)	172, 587, 829, 923, 1186, 1282
BstMWI	GCNNNNNNNGC	3 cut(s)	232, 383, 1154
BstNI	CCWGG	4 cut(s)	291, 496, 647, 1392
BstSCI	CCNGG	7 cut(s)	14, 155, 289, 494, 645, 1182, 1390
BstSLI	GKGCMC	1 cut(s)	502
BstUI	CGCG	2 cut(s)	988, 1157
BstV1I	GCAGC	2 cut(s)	389, 882
BstX2I	RGATCY	1 cut(s)	587
BstYI	RGATCY	1 cut(s)	587
BsuRI	GGCC	3 cut(s)	5, 500, 957
BtgI	CCRYGG	1 cut(s)	986
BtsCI	GGATG	8 cut(s)	300, 1057, 1093, 1179, 1250, 1276, 1324, 1339
BtsI	GCAGTG	1 cut(s)	817
BtsIMutI	CAGTG	4 cut(s)	750, 817, 914, 1410
Cac8I	GCNNGC	1 cut(s)	660
CaiI	CAGNNNCTG	1 cut(s)	1391
CciI	TCATGA	2 cut(s)	78, 571
CfoI	GCGC	1 cut(s)	116
Cfr13I	GGNCC	4 cut(s)	399, 498, 499, 680
Cfr42I	CCGCGG	1 cut(s)	989
CseI	GACGC	1 cut(s)	1146
Csp6I	GTAC	4 cut(s)	160, 835, 1005, 1465
CspCI	CAANNNNNGTGG	2 cut(s)	793, 828
CviAII	CATG	5 cut(s)	79, 572, 663, 1145, 1205
CviQI	GTAC	4 cut(s)	160, 835, 1005, 1465
DdeI	CTNAG	7 cut(s)	22, 332, 469, 729, 798, 1026, 1293
DinI	GGCGCC	1 cut(s)	115
DpnI	GATC	6 cut(s)	174, 589, 831, 925, 1188, 1284
DpnII	GATC	6 cut(s)	172, 587, 829, 923, 1186, 1282
EaeI	YGGCCR	1 cut(s)	955
Eam1104I	CTCTTC	5 cut(s)	16, 274, 343, 707, 763
EarI	CTCTTC	5 cut(s)	16, 274, 343, 707, 763
Ecl136II	GAGCTC	1 cut(s)	1290
Eco130I	CCWWGG	1 cut(s)	1514
Eco24I	GRGCYC	4 cut(s)	302, 502, 1202, 1292
Eco47I	GGWCC	2 cut(s)	399, 680
Eco53kI	GAGCTC	1 cut(s)	1290
Eco57I	CTGAAG	2 cut(s)	690, 726
Eco88I	CYCGRG	2 cut(s)	46, 109
EcoICRI	GAGCTC	1 cut(s)	1290
EcoO109I	RGGNCCY	3 cut(s)	498, 499, 680
EcoRI	GAATTC	1 cut(s)	1246
EcoRII	CCWGG	4 cut(s)	289, 494, 645, 1390
EcoT14I	CCWWGG	1 cut(s)	1514
EcoT38I	GRGCYC	4 cut(s)	302, 502, 1202, 1292
EgeI	GGCGCC	1 cut(s)	115
EheI	GGCGCC	1 cut(s)	115
ErhI	CCWWGG	1 cut(s)	1514
FaeI	CATG	5 cut(s)	82, 575, 666, 1148, 1208
FaqI	GGGAC	3 cut(s)	188, 202, 784
FatI	CATG	5 cut(s)	78, 571, 662, 1144, 1204
FauI	CCCGC	2 cut(s)	231, 310
FbaI	TGATCA	1 cut(s)	1282
Fnu4HI	GCNGC	3 cut(s)	378, 896, 1134
FokI	GGATG	8 cut(s)	307, 1064, 1080, 1166, 1237, 1283, 1331, 1346
FriOI	GRGCYC	4 cut(s)	302, 502, 1202, 1292
Fsp4HI	GCNGC	3 cut(s)	378, 896, 1134
FspBI	CTAG	2 cut(s)	677, 1113
GlaI	GCGC	1 cut(s)	115
GluI	GCNGC	3 cut(s)	378, 896, 1134
GsaI	CCCAGC	1 cut(s)	235
HaeII	RGCGCY	1 cut(s)	117
HaeIII	GGCC	3 cut(s)	5, 500, 957
HapII	CCGG	5 cut(s)	15, 156, 439, 1184, 1241
HgaI	GACGC	1 cut(s)	1146
HhaI	GCGC	1 cut(s)	116
Hin1I	GRCGYC	1 cut(s)	114
Hin1II	CATG	5 cut(s)	82, 575, 666, 1148, 1208
Hin6I	GCGC	1 cut(s)	114
HinP1I	GCGC	1 cut(s)	114
HinfI	GANTC	1 cut(s)	317
HpaII	CCGG	5 cut(s)	15, 156, 439, 1184, 1241
HphI	GGTGA	5 cut(s)	35, 49, 733, 1054, 1379
Hpy166II	GTNNAC	2 cut(s)	1005, 1075
Hpy188III	TCNNGA	7 cut(s)	79, 314, 572, 608, 1039, 1308, 1454
Hpy8I	GTNNAC	2 cut(s)	1005, 1075
HpyAV	CCTTC	5 cut(s)	70, 100, 964, 1110, 1358
HpyCH4III	ACNGT	2 cut(s)	556, 1405
HpyCH4V	TGCA	6 cut(s)	281, 377, 748, 781, 898, 1148
HpyF10VI	GCNNNNNNNGC	3 cut(s)	232, 383, 1154
HpyF3I	CTNAG	7 cut(s)	22, 332, 469, 729, 798, 1026, 1293
Hsp92I	GRCGYC	1 cut(s)	114
Hsp92II	CATG	5 cut(s)	82, 575, 666, 1148, 1208
HspAI	GCGC	1 cut(s)	114
KasI	GGCGCC	1 cut(s)	113
Ksp22I	TGATCA	1 cut(s)	1282
KspI	CCGCGG	1 cut(s)	989
Kzo9I	GATC	6 cut(s)	172, 587, 829, 923, 1186, 1282
LguI	GCTCTTC	1 cut(s)	343
LmnI	GCTCC	5 cut(s)	18, 184, 240, 454, 990
Lsp1109I	GCAGC	2 cut(s)	389, 882
MaeI	CTAG	2 cut(s)	677, 1113
MaeIII	GTNAC	2 cut(s)	1367, 1439
MalI	GATC	6 cut(s)	174, 589, 831, 925, 1188, 1284
MboI	GATC	6 cut(s)	172, 587, 829, 923, 1186, 1282
MboII	GAAGA	9 cut(s)	3, 261, 330, 341, 696, 724, 732, 750, 1131
MfeI	CAATTG	1 cut(s)	940
MflI	RGATCY	1 cut(s)	587
MhlI	GDGCHC	5 cut(s)	302, 459, 502, 1202, 1292
MlsI	TGGCCA	1 cut(s)	957
MluI	ACGCGT	1 cut(s)	1155
MluNI	TGGCCA	1 cut(s)	957
Mly113I	GGCGCC	1 cut(s)	114
MlyI	GAGTC	1 cut(s)	311
MmeI	TCCRAC	5 cut(s)	120, 366, 383, 530, 1029
Mox20I	TGGCCA	1 cut(s)	957
MscI	TGGCCA	1 cut(s)	957
MseI	TTAA	2 cut(s)	390, 447
Msp20I	TGGCCA	1 cut(s)	957
MspA1I	CMGCKG	3 cut(s)	895, 988, 1133
MspI	CCGG	5 cut(s)	15, 156, 439, 1184, 1241
MspR9I	CCNGG	7 cut(s)	16, 157, 291, 496, 647, 1184, 1392
MunI	CAATTG	1 cut(s)	940
MvaI	CCWGG	4 cut(s)	291, 496, 647, 1392
MvnI	CGCG	2 cut(s)	988, 1157
MwoI	GCNNNNNNNGC	3 cut(s)	232, 383, 1154
NarI	GGCGCC	1 cut(s)	114
NciI	CCSGG	3 cut(s)	16, 157, 1184
NdeII	GATC	6 cut(s)	172, 587, 829, 923, 1186, 1282
NlaIII	CATG	5 cut(s)	82, 575, 666, 1148, 1208
NlaIV	GGNNCC	3 cut(s)	115, 500, 501
NmeAIII	GCCGAG	1 cut(s)	331
NmuCI	GTSAC	2 cut(s)	1367, 1439
PagI	TCATGA	2 cut(s)	78, 571
PciSI	GCTCTTC	1 cut(s)	343
PflMI	CCANNNNNTGG	3 cut(s)	365, 393, 1353
PfoI	TCCNGGA	2 cut(s)	14, 1182
PkrI	GCNGC	3 cut(s)	379, 897, 1135
PleI	GAGTC	1 cut(s)	311
PluTI	GGCGCC	1 cut(s)	117
PpsI	GAGTC	1 cut(s)	311
PpuMI	RGGWCCY	1 cut(s)	680
PshBI	ATTAAT	1 cut(s)	390
Psp124BI	GAGCTC	1 cut(s)	1292
Psp5II	RGGWCCY	1 cut(s)	680
Psp6I	CCWGG	4 cut(s)	289, 494, 645, 1390
PspFI	CCCAGC	1 cut(s)	231
PspGI	CCWGG	4 cut(s)	289, 494, 645, 1390
PspN4I	GGNNCC	3 cut(s)	115, 500, 501
PspOMI	GGGCCC	1 cut(s)	498
PspPI	GGNCC	4 cut(s)	399, 498, 499, 680
PspPPI	RGGWCCY	1 cut(s)	680
PstNI	CAGNNNCTG	1 cut(s)	1391
PsuI	RGATCY	1 cut(s)	587
PvuII	CAGCTG	1 cut(s)	895
RsaI	GTAC	4 cut(s)	161, 836, 1006, 1466
RsaNI	GTAC	4 cut(s)	160, 835, 1005, 1465
SacI	GAGCTC	1 cut(s)	1292
SacII	CCGCGG	1 cut(s)	989
SapI	GCTCTTC	1 cut(s)	343
SaqAI	TTAA	2 cut(s)	390, 447
SatI	GCNGC	3 cut(s)	378, 896, 1134
Sau3AI	GATC	6 cut(s)	172, 587, 829, 923, 1186, 1282
Sau96I	GGNCC	4 cut(s)	399, 498, 499, 680
SchI	GAGTC	1 cut(s)	311
ScrFI	CCNGG	7 cut(s)	16, 157, 291, 496, 647, 1184, 1392
SduI	GDGCHC	5 cut(s)	302, 459, 502, 1202, 1292
SfoI	GGCGCC	1 cut(s)	115
Sfr303I	CCGCGG	1 cut(s)	989
SgrBI	CCGCGG	1 cut(s)	989
SinI	GGWCC	2 cut(s)	399, 680
SmlI	CTYRAG	1 cut(s)	381
SmoI	CTYRAG	1 cut(s)	381
SsiI	CCGC	8 cut(s)	33, 141, 182, 224, 303, 986, 988, 1133
SspDI	GGCGCC	1 cut(s)	113
SspMI	CTAG	2 cut(s)	677, 1113
SstI	GAGCTC	1 cut(s)	1292
StyD4I	CCNGG	7 cut(s)	14, 155, 289, 494, 645, 1182, 1390
StyI	CCWWGG	1 cut(s)	1514
TaaI	ACNGT	2 cut(s)	556, 1405
TaqI	TCGA	2 cut(s)	315, 1038
TatI	WGTACW	2 cut(s)	834, 1004
TauI	GCSGC	1 cut(s)	1136
Tru1I	TTAA	2 cut(s)	390, 447
Tru9I	TTAA	2 cut(s)	390, 447
TscAI	CASTG	4 cut(s)	750, 817, 914, 1410
TseFI	GTSAC	2 cut(s)	1367, 1439
TseI	GCWGC	2 cut(s)	377, 895
Tsp45I	GTSAC	2 cut(s)	1367, 1439
TspDTI	ATGAA	7 cut(s)	67, 501, 560, 588, 1116, 1239, 1389
TspRI	CASTG	4 cut(s)	750, 817, 914, 1410
Van91I	CCANNNNNTGG	3 cut(s)	365, 393, 1353
VpaK11BI	GGWCC	2 cut(s)	399, 680
VspI	ATTAAT	1 cut(s)	390
XapI	RAATTY	3 cut(s)	37, 575, 1246
XspI	CTAG	2 cut(s)	677, 1113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.