Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001456

Physical Location & Seq

Genomic Coordinates Reverse (-)

76777227 .. 76780523

Gene Structure 3297 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G043770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGCCTCCTCTTCCGGGAGCTTAGACACCTCCGCAAATTCTCACCCAAGCAACTTCACCTTCTCCACCCACCCATTCATGACCACCTCCTTCTCCGACCTCTTATCCTCGGGCGCCGACACCACAAACCCAATAGCCACCGCAACCCGAAACTCCGGGTACGGGTTATCGGATCGTATTGCGGAGCGAACGGGGTCGGGTGTCCCCAAGTTCAAGTCCCTCCCGCCTCCCCAGCTCCCCATTTCGCCTCCCTCTGTTGTGTCTCCCTCTTCCTACTTTGCAATCCCACCTGGGATGAGCCCCGCCGAGCTTCTCGACTCTCCTGTGCTTCTCAGCTCTTCCAACATTCTTCCATCTCCAACTACTGGGAGTTTTGCAGCTCAAGCCTTTAATTGGAGGACCAATTCTGGTTCTGGTACTAACAACAATAACAACAACCGGAGTGTTAAAGAGGAGCACAAGAACTACTCAGATTTCTCTTTCCAAACCCAAACCAGGGCCCCTCCAACTTCATCATCAGCAATTTTCCAATCCTCTAACAGCTCAATTCAGACTGCACAAGAGCAGGCATGGAATAACTATCTAGGACCTCCCAAACAAGATAACTTTTCTTCAGGGAAGAGTATGGTGAAACCTGAGTATGGTTCTTCAGTGCAGAGCTTCTCTTCTGAAATGGGGACTAATATGCAGAGCAATAACGATGCTCAGCCCAACAGCAGTGGTGGTTTCCAATCAGATCAGTACAGCAACTACAATAACAACAACAACAACAGCAACAACAACCAGCTGCAATCCCACCAGTGCTTGAACAGGAGATCAGATGATGGGTTCAATTGGAGGAAATATGGCCAGAAACAAGTGAAGGGAAGCGAAAATCCGCGAAGCTATTACAAGTGTACTTATCCGAATTGCCCAACTAAGAAAAAGGTTGAGAGGTCGTTGGATGGACAAATCACCGAGATAGTTTACAAGGGTAATCATAACCATCCCAAGCCACAGAATACTAGAAGGTCGGGTTCATCAGCGGCTTCTTCCCATGTAATCCAGGCTTCCAATCACACCACCAATGACATCCCGGATCAGTCTTTCGGCTCTCATGGTAATTCACAAATGGATAACTCCATTGGAACACCGGAGAATTCATCCAATTTTTCAAATGGGGATGATGAGTTTGATCAGAGCTCTCAGAGAAGCAAGTCAGGAGGAGGGGATGAGTATGATGAGGATGAGCCTAATGCCAAAAGATGGAAAAAAGAAGGTGACAATGAATGTATTTCAGCACCTGGGAGTAGAACAGTGAGAGAACCAAGAGTTGTAGTTCAAACAACAAGTGACATTGATATTCTTGATGATGGGTACAGGTGGAGGAAGTATGGTCAGAAAGTAGTAAAGGGCAACCCAAATCCAAGGAGCTACTACAAGTGCACAAATCCAGGCTGTCCAGTGAGGAAGCACGTAGAGCGAGCTTCACATGATCTTAGAGCAGTGATCACAACCTACGAAGGGAAGCACAACCATGATGTTCCTGCAGCCCGTGGCAGTGGTTCTGCCAACAGGCCTTTACCAAGCCACAATACCAACAACAACCACAATGTACCCACAGCAATGAGGCCTATGACCCATCACAGTACTAACAATGCTGCTAACAACAACCCTCTTGACAATCTAAGGCTACCGACATCAGAAGGGCAAGCACCCTTTACTCTCGAGATGTTGCAGAGCCCAGCAAGTTATGGATTTGCAGGGTTTGATAACCCCATGGGGTCATACATTAACCAAACACAGCTCAATGACAACAACATGTTTTCTAAAACCAAGGACGAGCCAAGAGATGACGCATTTTTTGAATCATTGCTGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006725 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009403 GO:0009404 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009700 GO:0009889 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010035 GO:0010120 GO:0010200 GO:0010243 GO:0010286 GO:0010468 GO:0010506 GO:0010508 GO:0010556 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019748 GO:0031323 GO:0031325 GO:0031326 GO:0031329 GO:0031331 GO:0033554 GO:0034605 GO:0034641 GO:0042221 GO:0042430 GO:0042435 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044424 GO:0044464 GO:0044550 GO:0046217 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0052314 GO:0052315 GO:0052317 GO:0060255 GO:0065007 GO:0070370 GO:0071704 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

620

Amino Acids

67.89

Weight (kDa)

6.99

Isoelectric Point (pI)

51.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	274 - 330	1.6e-26	WRKY DNA -binding domain
WRKY	PF03106	450 - 507	2.3e-26	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07100 AT5G07100 AT5G07100 AT5G07100 AT5G07100
fragaria_vesca	FvH4_3g39850 FvH4_3g39850 FvH4_3g39850 FvH4_3g39850 FvH4_3g39850 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510
malus_domestica	MD03G1057400.v1.1 MD04G1167700.v1.1 MD06G1115200.v1.1 MD11G1059400.v1.1 MD12G1181000.v1.1
prunus_persica	Prupe.6G046900_v2.0.a1 Prupe.6G286000_v2.0.a1
pyrus_communis	pycom03g04580 pycom04g14890 pycom06g10790 pycom11g04930 pycom12g17060
rosa_chinensis	RchiOBHm_Chr3g0461481 RchiOBHm_Chr5g0071811
rosa_laevigata	RLG00000024931 RLG00000036250
rosa_multiflora	Rmu_sc0002677.1_g000005 Rmu_ssc0000127.1_g000054
rosa_roxburghii	Rroxscaffold_1G00009350 Rroxscaffold_6G00418250 Rroxscaffold_6G00418580
rosa_rugosa	Rorug03G0051000 Rorug03G0051100.1 Rorug05G0414700
rosa_samantha	Rh3AG108800 Rh3BG112700 Rh3CG114200 Rh3DG114300 Rh5AG471000 Rh5BG490700 Rh5CG514700 Rh5DG502000
rosa_wichuraiana	Rw3G009250 Rw5G043770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	113
AccB7I	CCANNNNNTGG	2 cut(s)	365, 1245
AccII	CGCG	1 cut(s)	880
AciI	CCGC	7 cut(s)	33, 141, 182, 224, 303, 878, 1025
AclWI	GGATC	2 cut(s)	180, 1086
AcoI	YGGCCR	1 cut(s)	847
AcsI	RAATTY	2 cut(s)	37, 1138
AcuI	CTGAAG	2 cut(s)	597, 633
AcyI	GRCGYC	1 cut(s)	114
AfaI	GTAC	7 cut(s)	161, 418, 743, 898, 1358, 1596, 1630
AfiI	CCNNNNNNNGG	9 cut(s)	15, 162, 365, 393, 495, 496, 641, 1245, 1503
AflIII	ACRYGT	1 cut(s)	1800
AgsI	TTSAA	6 cut(s)	214, 808, 832, 1155, 1322, 1847
AjnI	CCWGG	5 cut(s)	289, 494, 1044, 1282, 1432
Alw21I	GWGCWC	3 cut(s)	459, 1184, 1427
Alw26I	GTCTC	1 cut(s)	267
Alw44I	GTGCAC	1 cut(s)	1423
AlwI	GGATC	2 cut(s)	180, 1086
AlwNI	CAGNNNCTG	1 cut(s)	1283
Ama87I	CYCGRG	2 cut(s)	109, 1706
AoxI	GGCC	5 cut(s)	3, 498, 847, 1556, 1610
ApaI	GGGCCC	1 cut(s)	502
ApaLI	GTGCAC	1 cut(s)	1423
ApeKI	GCWGC	4 cut(s)	377, 787, 1529, 1640
ApoI	RAATTY	2 cut(s)	37, 1138
ArsI	GACNNNNNNTTYG	2 cut(s)	1826, 1858
AspLEI	GCGC	1 cut(s)	116
AspS9I	GGNCC	4 cut(s)	399, 498, 499, 587
AsuC2I	CCSGG	3 cut(s)	16, 157, 1076
AsuHPI	GGTGA	5 cut(s)	35, 49, 640, 946, 1271
AvaI	CYCGRG	2 cut(s)	109, 1706
AvaII	GGWCC	2 cut(s)	399, 587
BaeGI	GKGCMC	2 cut(s)	502, 1427
BalI	TGGCCA	1 cut(s)	849
BanI	GGYRCC	1 cut(s)	113
BanII	GRGCYC	4 cut(s)	302, 502, 1184, 1724
Bbv12I	GWGCWC	3 cut(s)	459, 1184, 1427
BbvI	GCAGC	4 cut(s)	389, 774, 1541, 1627
BccI	CCATC	7 cut(s)	361, 818, 938, 993, 1239, 1346, 1629
BciT130I	CCWGG	5 cut(s)	291, 496, 1046, 1284, 1434
BclI	TGATCA	2 cut(s)	1174, 1488
BcnI	CCSGG	3 cut(s)	16, 157, 1076
BcoDI	GTCTC	1 cut(s)	267
BfaI	CTAG	2 cut(s)	584, 1005
BfmI	CTRYAG	1 cut(s)	1527
BfoI	RGCGCY	1 cut(s)	117
BisI	GCNGC	5 cut(s)	378, 788, 1026, 1530, 1641
BlpI	GCTNAGC	1 cut(s)	705
BlsI	GCNGC	5 cut(s)	379, 789, 1027, 1531, 1642
BmcAI	AGTACT	1 cut(s)	1630
Bme1390I	CCNGG	8 cut(s)	16, 157, 291, 496, 1046, 1076, 1284, 1434
Bme18I	GGWCC	2 cut(s)	399, 587
BmeT110I	CYCGRG	2 cut(s)	109, 1706
BmgT120I	GGNCC	4 cut(s)	399, 498, 499, 587
BmiI	GGNNCC	3 cut(s)	115, 500, 501
BmrFI	CCNGG	8 cut(s)	16, 157, 291, 496, 1046, 1076, 1284, 1434
BmrI	ACTGGG	1 cut(s)	375
BmsI	GCATC	1 cut(s)	691
BmuI	ACTGGG	1 cut(s)	375
Bpu1102I	GCTNAGC	1 cut(s)	705
BpuEI	CTTGAG	1 cut(s)	366
BpuMI	CCSGG	3 cut(s)	16, 157, 1076
BsaAI	YACGTR	1 cut(s)	1456
BsaHI	GRCGYC	1 cut(s)	114
BsaJI	CCNNGG	8 cut(s)	108, 290, 495, 1283, 1406, 1534, 1758, 1815
BsaWI	WCCGGW	2 cut(s)	438, 1132
Bsc4I	CCNNNNNNNGG	9 cut(s)	15, 162, 365, 393, 495, 496, 641, 1245, 1503
Bse1I	ACTGG	3 cut(s)	370, 799, 1442
Bse3DI	GCAATG	2 cut(s)	1611, 1850
BseBI	CCWGG	5 cut(s)	291, 496, 1046, 1284, 1434
BseDI	CCNNGG	8 cut(s)	108, 290, 495, 1283, 1406, 1534, 1758, 1815
BseGI	GGATG	8 cut(s)	300, 949, 985, 1071, 1142, 1168, 1216, 1231
BseLI	CCNNNNNNNGG	9 cut(s)	15, 162, 365, 393, 495, 496, 641, 1245, 1503
BseMI	GCAATG	2 cut(s)	1611, 1850
BseMII	CTCAG	5 cut(s)	346, 483, 627, 719, 1199
BseNI	ACTGG	3 cut(s)	370, 799, 1442
BseRI	GAGGAG	2 cut(s)	467, 1218
BseSI	GKGCMC	2 cut(s)	502, 1427
BseXI	GCAGC	4 cut(s)	389, 774, 1541, 1627
BseYI	CCCAGC	2 cut(s)	231, 1723
BsgI	GTGCAG	2 cut(s)	540, 674
Bsh1236I	CGCG	1 cut(s)	880
BshFI	GGCC	5 cut(s)	5, 500, 849, 1558, 1612
BshNI	GGYRCC	1 cut(s)	113
BsiHKAI	GWGCWC	3 cut(s)	459, 1184, 1427
BsiHKCI	CYCGRG	2 cut(s)	109, 1706
BsiSI	CCGG	5 cut(s)	15, 156, 439, 1076, 1133
BslFI	GGGAC	3 cut(s)	188, 202, 691
BslI	CCNNNNNNNGG	9 cut(s)	15, 162, 365, 393, 495, 496, 641, 1245, 1503
BsmAI	GTCTC	1 cut(s)	267
BsmFI	GGGAC	3 cut(s)	188, 202, 691
BsnI	GGCC	5 cut(s)	5, 500, 849, 1558, 1612
BsoBI	CYCGRG	2 cut(s)	109, 1706
Bsp120I	GGGCCC	1 cut(s)	498
Bsp1286I	GDGCHC	6 cut(s)	302, 459, 502, 1184, 1427, 1724
Bsp143I	GATC	7 cut(s)	172, 736, 815, 1078, 1174, 1474, 1488
Bsp1720I	GCTNAGC	1 cut(s)	705
Bsp19I	CCATGG	1 cut(s)	1758
BspACI	CCGC	7 cut(s)	33, 141, 182, 224, 303, 878, 1025
BspANI	GGCC	5 cut(s)	5, 500, 849, 1558, 1612
BspCNI	CTCAG	5 cut(s)	345, 482, 628, 718, 1198
BspFNI	CGCG	1 cut(s)	880
BspHI	TCATGA	1 cut(s)	78
BspLI	GGNNCC	3 cut(s)	115, 500, 501
BspMAI	CTGCAG	1 cut(s)	1531
BspPI	GGATC	2 cut(s)	180, 1086
BspQI	GCTCTTC	1 cut(s)	343
BspT107I	GGYRCC	1 cut(s)	113
BsrDI	GCAATG	2 cut(s)	1611, 1850
BsrI	ACTGG	3 cut(s)	370, 799, 1442
BssECI	CCNNGG	8 cut(s)	108, 290, 495, 1283, 1406, 1534, 1758, 1815
BssMI	GATC	7 cut(s)	172, 736, 815, 1078, 1174, 1474, 1488
BssNI	GRCGYC	1 cut(s)	114
BssT1I	CCWWGG	3 cut(s)	1406, 1758, 1815
Bst2UI	CCWGG	5 cut(s)	291, 496, 1046, 1284, 1434
Bst4CI	ACNGT	2 cut(s)	1297, 1628
Bst6I	CTCTTC	5 cut(s)	16, 274, 343, 614, 670
BstACI	GRCGYC	1 cut(s)	114
BstBAI	YACGTR	1 cut(s)	1456
BstC8I	GCNNGC	3 cut(s)	567, 1464, 1692
BstDEI	CTNAG	9 cut(s)	22, 332, 469, 636, 705, 918, 1185, 1478, 1667
BstDSI	CCRYGG	2 cut(s)	1534, 1758
BstF5I	GGATG	8 cut(s)	300, 949, 985, 1071, 1142, 1168, 1216, 1231
BstFNI	CGCG	1 cut(s)	880
BstH2I	RGCGCY	1 cut(s)	117
BstHHI	GCGC	1 cut(s)	116
BstKTI	GATC	7 cut(s)	175, 739, 818, 1081, 1177, 1477, 1491
BstMAI	GTCTC	1 cut(s)	267
BstMBI	GATC	7 cut(s)	172, 736, 815, 1078, 1174, 1474, 1488
BstMWI	GCNNNNNNNGC	3 cut(s)	232, 383, 1459
BstNI	CCWGG	5 cut(s)	291, 496, 1046, 1284, 1434
BstNSI	RCATGY	1 cut(s)	1804
BstSCI	CCNGG	8 cut(s)	14, 155, 289, 494, 1044, 1074, 1282, 1432
BstSFI	CTRYAG	1 cut(s)	1527
BstSLI	GKGCMC	2 cut(s)	502, 1427
BstUI	CGCG	1 cut(s)	880
BstV1I	GCAGC	4 cut(s)	389, 774, 1541, 1627
BsuRI	GGCC	5 cut(s)	5, 500, 849, 1558, 1612
BtgI	CCRYGG	2 cut(s)	1534, 1758
BtsCI	GGATG	8 cut(s)	300, 949, 985, 1071, 1142, 1168, 1216, 1231
BtsI	GCAGTG	3 cut(s)	724, 1491, 1546
BtsIMutI	CAGTG	7 cut(s)	657, 724, 806, 1302, 1449, 1491, 1546
Cac8I	GCNNGC	3 cut(s)	567, 1464, 1692
CaiI	CAGNNNCTG	1 cut(s)	1283
CciI	TCATGA	1 cut(s)	78
CfoI	GCGC	1 cut(s)	116
Cfr13I	GGNCC	4 cut(s)	399, 498, 499, 587
CseI	GACGC	1 cut(s)	1844
Csp6I	GTAC	7 cut(s)	160, 417, 742, 897, 1357, 1595, 1629
CspCI	CAANNNNNGTGG	2 cut(s)	700, 735
CviAII	CATG	8 cut(s)	79, 570, 1037, 1097, 1472, 1517, 1759, 1801
CviQI	GTAC	7 cut(s)	160, 417, 742, 897, 1357, 1595, 1629
DdeI	CTNAG	9 cut(s)	22, 332, 469, 636, 705, 918, 1185, 1478, 1667
DinI	GGCGCC	1 cut(s)	115
DpnI	GATC	7 cut(s)	174, 738, 817, 1080, 1176, 1476, 1490
DpnII	GATC	7 cut(s)	172, 736, 815, 1078, 1174, 1474, 1488
EaeI	YGGCCR	1 cut(s)	847
Eam1104I	CTCTTC	5 cut(s)	16, 274, 343, 614, 670
EarI	CTCTTC	5 cut(s)	16, 274, 343, 614, 670
Ecl136II	GAGCTC	1 cut(s)	1182
Eco130I	CCWWGG	3 cut(s)	1406, 1758, 1815
Eco147I	AGGCCT	2 cut(s)	1558, 1612
Eco24I	GRGCYC	4 cut(s)	302, 502, 1184, 1724
Eco47I	GGWCC	2 cut(s)	399, 587
Eco53kI	GAGCTC	1 cut(s)	1182
Eco57I	CTGAAG	2 cut(s)	597, 633
Eco88I	CYCGRG	2 cut(s)	109, 1706
EcoICRI	GAGCTC	1 cut(s)	1182
EcoO109I	RGGNCCY	3 cut(s)	498, 499, 587
EcoRI	GAATTC	1 cut(s)	1138
EcoRII	CCWGG	5 cut(s)	289, 494, 1044, 1282, 1432
EcoT14I	CCWWGG	3 cut(s)	1406, 1758, 1815
EcoT38I	GRGCYC	4 cut(s)	302, 502, 1184, 1724
EgeI	GGCGCC	1 cut(s)	115
EheI	GGCGCC	1 cut(s)	115
ErhI	CCWWGG	3 cut(s)	1406, 1758, 1815
FaeI	CATG	8 cut(s)	82, 573, 1040, 1100, 1475, 1520, 1762, 1804
FaqI	GGGAC	3 cut(s)	188, 202, 691
FatI	CATG	8 cut(s)	78, 569, 1036, 1096, 1471, 1516, 1758, 1800
FauI	CCCGC	2 cut(s)	231, 310
FbaI	TGATCA	2 cut(s)	1174, 1488
Fnu4HI	GCNGC	5 cut(s)	378, 788, 1026, 1530, 1641
FokI	GGATG	8 cut(s)	307, 956, 972, 1058, 1129, 1175, 1223, 1238
FriOI	GRGCYC	4 cut(s)	302, 502, 1184, 1724
Fsp4HI	GCNGC	5 cut(s)	378, 788, 1026, 1530, 1641
FspBI	CTAG	2 cut(s)	584, 1005
GlaI	GCGC	1 cut(s)	115
GluI	GCNGC	5 cut(s)	378, 788, 1026, 1530, 1641
GsaI	CCCAGC	2 cut(s)	235, 1727
HaeII	RGCGCY	1 cut(s)	117
HaeIII	GGCC	5 cut(s)	5, 500, 849, 1558, 1612
HapII	CCGG	5 cut(s)	15, 156, 439, 1076, 1133
HgaI	GACGC	1 cut(s)	1844
HhaI	GCGC	1 cut(s)	116
Hin1I	GRCGYC	1 cut(s)	114
Hin1II	CATG	8 cut(s)	82, 573, 1040, 1100, 1475, 1520, 1762, 1804
Hin6I	GCGC	1 cut(s)	114
HinP1I	GCGC	1 cut(s)	114
HinfI	GANTC	2 cut(s)	317, 1847
HpaII	CCGG	5 cut(s)	15, 156, 439, 1076, 1133
HphI	GGTGA	5 cut(s)	35, 49, 640, 946, 1271
Hpy166II	GTNNAC	3 cut(s)	897, 967, 1425
Hpy188III	TCNNGA	7 cut(s)	79, 314, 1200, 1346, 1658, 1706, 1708
Hpy8I	GTNNAC	3 cut(s)	897, 967, 1425
HpyAV	CCTTC	7 cut(s)	70, 100, 856, 1002, 1250, 1496, 1679
HpyCH4III	ACNGT	2 cut(s)	1297, 1628
HpyCH4IV	ACGT	1 cut(s)	1455
HpyF10VI	GCNNNNNNNGC	3 cut(s)	232, 383, 1459
HpyF3I	CTNAG	9 cut(s)	22, 332, 469, 636, 705, 918, 1185, 1478, 1667
HpySE526I	ACGT	1 cut(s)	1455
Hsp92I	GRCGYC	1 cut(s)	114
Hsp92II	CATG	8 cut(s)	82, 573, 1040, 1100, 1475, 1520, 1762, 1804
HspAI	GCGC	1 cut(s)	114
KasI	GGCGCC	1 cut(s)	113
Ksp22I	TGATCA	2 cut(s)	1174, 1488
Kzo9I	GATC	7 cut(s)	172, 736, 815, 1078, 1174, 1474, 1488
LguI	GCTCTTC	1 cut(s)	343
LmnI	GCTCC	5 cut(s)	18, 184, 240, 454, 1410
Lsp1109I	GCAGC	4 cut(s)	389, 774, 1541, 1627
LweI	GCATC	1 cut(s)	691
MaeI	CTAG	2 cut(s)	584, 1005
MaeII	ACGT	1 cut(s)	1455
MaeIII	GTNAC	2 cut(s)	1259, 1331
MalI	GATC	7 cut(s)	174, 738, 817, 1080, 1176, 1476, 1490
MboI	GATC	7 cut(s)	172, 736, 815, 1078, 1174, 1474, 1488
MboII	GAAGA	9 cut(s)	3, 261, 330, 341, 603, 631, 639, 657, 1023
MfeI	CAATTG	1 cut(s)	832
MhlI	GDGCHC	6 cut(s)	302, 459, 502, 1184, 1427, 1724
MlsI	TGGCCA	1 cut(s)	849
MluNI	TGGCCA	1 cut(s)	849
Mly113I	GGCGCC	1 cut(s)	114
MlyI	GAGTC	1 cut(s)	311
MmeI	TCCRAC	5 cut(s)	120, 366, 383, 530, 921
Mox20I	TGGCCA	1 cut(s)	849
MscI	TGGCCA	1 cut(s)	849
MseI	TTAA	3 cut(s)	390, 447, 1773
MslI	CAYNNNNRTG	3 cut(s)	1515, 1604, 1855
Msp20I	TGGCCA	1 cut(s)	849
MspA1I	CMGCKG	2 cut(s)	787, 1025
MspI	CCGG	5 cut(s)	15, 156, 439, 1076, 1133
MspR9I	CCNGG	8 cut(s)	16, 157, 291, 496, 1046, 1076, 1284, 1434
MunI	CAATTG	1 cut(s)	832
MvaI	CCWGG	5 cut(s)	291, 496, 1046, 1284, 1434
MvnI	CGCG	1 cut(s)	880
MwoI	GCNNNNNNNGC	3 cut(s)	232, 383, 1459
NarI	GGCGCC	1 cut(s)	114
NciI	CCSGG	3 cut(s)	16, 157, 1076
NcoI	CCATGG	1 cut(s)	1758
NdeII	GATC	7 cut(s)	172, 736, 815, 1078, 1174, 1474, 1488
NlaIII	CATG	8 cut(s)	82, 573, 1040, 1100, 1475, 1520, 1762, 1804
NlaIV	GGNNCC	3 cut(s)	115, 500, 501
NmeAIII	GCCGAG	1 cut(s)	331
NmuCI	GTSAC	2 cut(s)	1259, 1331
NspI	RCATGY	1 cut(s)	1804
PaeR7I	CTCGAG	1 cut(s)	1706
PagI	TCATGA	1 cut(s)	78
PceI	AGGCCT	2 cut(s)	1558, 1612
PciI	ACATGT	1 cut(s)	1800
PciSI	GCTCTTC	1 cut(s)	343
PfeI	GAWTC	1 cut(s)	1847
PflMI	CCANNNNNTGG	2 cut(s)	365, 1245
PfoI	TCCNGGA	2 cut(s)	14, 1074
PkrI	GCNGC	5 cut(s)	379, 789, 1027, 1531, 1642
PleI	GAGTC	1 cut(s)	311
PluTI	GGCGCC	1 cut(s)	117
PpsI	GAGTC	1 cut(s)	311
Ppu21I	YACGTR	1 cut(s)	1456
PpuMI	RGGWCCY	1 cut(s)	587
PscI	ACATGT	1 cut(s)	1800
Psp124BI	GAGCTC	1 cut(s)	1184
Psp5II	RGGWCCY	1 cut(s)	587
Psp6I	CCWGG	5 cut(s)	289, 494, 1044, 1282, 1432
PspFI	CCCAGC	2 cut(s)	231, 1723
PspGI	CCWGG	5 cut(s)	289, 494, 1044, 1282, 1432
PspN4I	GGNNCC	3 cut(s)	115, 500, 501
PspOMI	GGGCCC	1 cut(s)	498
PspPI	GGNCC	4 cut(s)	399, 498, 499, 587
PspPPI	RGGWCCY	1 cut(s)	587
PstI	CTGCAG	1 cut(s)	1531
PstNI	CAGNNNCTG	1 cut(s)	1283
PvuII	CAGCTG	1 cut(s)	787
RsaI	GTAC	7 cut(s)	161, 418, 743, 898, 1358, 1596, 1630
RsaNI	GTAC	7 cut(s)	160, 417, 742, 897, 1357, 1595, 1629
RseI	CAYNNNNRTG	3 cut(s)	1515, 1604, 1855
SacI	GAGCTC	1 cut(s)	1184
SapI	GCTCTTC	1 cut(s)	343
SaqAI	TTAA	3 cut(s)	390, 447, 1773
SatI	GCNGC	5 cut(s)	378, 788, 1026, 1530, 1641
Sau3AI	GATC	7 cut(s)	172, 736, 815, 1078, 1174, 1474, 1488
Sau96I	GGNCC	4 cut(s)	399, 498, 499, 587
ScaI	AGTACT	1 cut(s)	1630
SchI	GAGTC	1 cut(s)	311
ScrFI	CCNGG	8 cut(s)	16, 157, 291, 496, 1046, 1076, 1284, 1434
SduI	GDGCHC	6 cut(s)	302, 459, 502, 1184, 1427, 1724
SfaNI	GCATC	1 cut(s)	691
SfcI	CTRYAG	1 cut(s)	1527
SfoI	GGCGCC	1 cut(s)	115
Sfr274I	CTCGAG	1 cut(s)	1706
SinI	GGWCC	2 cut(s)	399, 587
SlaI	CTCGAG	1 cut(s)	1706
SmiMI	CAYNNNNRTG	3 cut(s)	1515, 1604, 1855
SmlI	CTYRAG	2 cut(s)	381, 1706
SmoI	CTYRAG	2 cut(s)	381, 1706
SseBI	AGGCCT	2 cut(s)	1558, 1612
SsiI	CCGC	7 cut(s)	33, 141, 182, 224, 303, 878, 1025
SspDI	GGCGCC	1 cut(s)	113
SspMI	CTAG	2 cut(s)	584, 1005
SstI	GAGCTC	1 cut(s)	1184
StuI	AGGCCT	2 cut(s)	1558, 1612
StyD4I	CCNGG	8 cut(s)	14, 155, 289, 494, 1044, 1074, 1282, 1432
StyI	CCWWGG	3 cut(s)	1406, 1758, 1815
TaaI	ACNGT	2 cut(s)	1297, 1628
TaiI	ACGT	1 cut(s)	1458
TaqI	TCGA	2 cut(s)	315, 1707
TatI	WGTACW	3 cut(s)	741, 896, 1628
TauI	GCSGC	1 cut(s)	1028
TfiI	GAWTC	1 cut(s)	1847
Tru1I	TTAA	3 cut(s)	390, 447, 1773
Tru9I	TTAA	3 cut(s)	390, 447, 1773
TscAI	CASTG	7 cut(s)	657, 724, 806, 1302, 1449, 1491, 1546
TseFI	GTSAC	2 cut(s)	1259, 1331
TseI	GCWGC	4 cut(s)	377, 787, 1529, 1640
Tsp45I	GTSAC	2 cut(s)	1259, 1331
TspDTI	ATGAA	5 cut(s)	67, 501, 1008, 1131, 1281
TspRI	CASTG	7 cut(s)	657, 724, 806, 1302, 1449, 1491, 1546
Van91I	CCANNNNNTGG	2 cut(s)	365, 1245
VneI	GTGCAC	1 cut(s)	1423
VpaK11BI	GGWCC	2 cut(s)	399, 587
XapI	RAATTY	2 cut(s)	37, 1138
XceI	RCATGY	1 cut(s)	1804
XhoI	CTCGAG	1 cut(s)	1706
XspI	CTAG	2 cut(s)	584, 1005
ZrmI	AGTACT	1 cut(s)	1630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.