Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001456

Physical Location & Seq

Genomic Coordinates Reverse (-)

80755848 .. 80760036

Gene Structure 4189 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG471000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGCCTCCTCTTCCGGGAGCTTAGACACCTCCGCAAATTCTCACCCGAGCAACTTCACCTTCTCCACCCACCCATTCATGACCACCTCCTTCTCCGACCTCTTATCCTCGGGCGCCGACACCACAAACCCAATGGCCACCGCAACCCGAAACTCCGGGTACGGGTTATCGGATCGTATTGCGGAGCGAACGGGGTCGGGTGTCCCCAAGTTCAAGTCCCTCCCGCCTCCCCAGCTCCCCATTTCGCCTCCCTCTGTTGTGTCTCCCTCTTCCTACTTTGCAATCCCACCTGGGATGAGCCCCGCCGAGCTTCTCGACTCTCCTGTGCTTCTCAGCTCTTCCAACATTCTTCCATCTCCAACTACTGGGAGTTTTGCAGCTCAAGCCTTTAATTGGAGGACCAATATTTCTGGTTCTGGTACTAACAACAATAACAACAACCGGAGTGTTAAAGAGGAGCACAAGAACTACTCAGATTTCTCTTTCCAAACCCAAACCAGGGCCCCTCCAACTTCATCATCAGCAATTTTCCAATCCTCAAACAGCTCAATTCAGACTGCACAAGAGCAGGCATGGAATAACTATCTAGGACCTCCCAAACAAGATAACTTTTCTTCAGGGAAGAGTATGGTGAAACCTGAGTATGGTTCTTCAGTGCAGAGCTTCTCTTCTGAAATGGGGACTAATATGCAGAGCAATAACAATGCTCAGCCCAACAGCAGTGGTGGTTTCCAATCAGATCAGTACAGCAACTACAATAACAACAACAACAACAACAACAACCAGCTGCAATCCCATCAGTGCTTGAACAGGAGATCAGATGATGGGTTCAATTGGAGGAAATATGGCCAGAAACAAGTGAAGGGAAGCGAAAATCCGCGGAGCTATTACAAGTGTACTTATCCGAATTGCCCAACTAAGAAAAAGGTTGAGAGGTCGTTGGATGGACAAATCACCGAGATAGTTTACAAGGGTAATCATAACCATCCCAAGCCACAGAATACTAGAAGGTCGGGTTCATCAGCGGCTTCTTCCCATGCAATCCAGGCTTCCAATCACACCACCAATGACATCCCAGATCAGTCTTTCGGCTCTCATGGTAATTCACAAATGGATAACTCCATTGGAACACCGGAGAATTCATCCAATTTTTCAAATGGGGATGATGAGTTTGATCAGAGCTCTCAGAGAAGCAAGTCAGGAGGAGGGGATGAGTATGATGAAGATGAGCCTAATGCCAAAAGATGGAAAAAAGAAGGTGACAATGAATGTATTTCAGCACCTGGGAGTAGAACAGTGAGAGAACCAAGAGTTGTAGTTCAAACAACAAGTGACATTGATATTCTTGATGATGGGTACAGGTGGAGGAAGTATGGTCAGAAAGTAGTAAAGGGCAACCCAAATCCAAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006725 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009403 GO:0009404 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009700 GO:0009889 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010035 GO:0010120 GO:0010200 GO:0010243 GO:0010286 GO:0010468 GO:0010506 GO:0010508 GO:0010556 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019748 GO:0031323 GO:0031325 GO:0031326 GO:0031329 GO:0031331 GO:0033554 GO:0034605 GO:0034641 GO:0042221 GO:0042430 GO:0042435 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044424 GO:0044464 GO:0044550 GO:0046217 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0052314 GO:0052315 GO:0052317 GO:0060255 GO:0065007 GO:0070370 GO:0071704 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

470

Amino Acids

51.3

Weight (kDa)

7.68

Isoelectric Point (pI)

55.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	274 - 330	1.1e-26	WRKY DNA -binding domain
WRKY	PF03106	450 - 470	1.4e-06	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07100 AT5G07100 AT5G07100 AT5G07100 AT5G07100
fragaria_vesca	FvH4_3g39850 FvH4_3g39850 FvH4_3g39850 FvH4_3g39850 FvH4_3g39850 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510 FvH4_6g10510
malus_domestica	MD03G1057400.v1.1 MD04G1167700.v1.1 MD06G1115200.v1.1 MD11G1059400.v1.1 MD12G1181000.v1.1
prunus_persica	Prupe.6G046900_v2.0.a1 Prupe.6G286000_v2.0.a1
pyrus_communis	pycom03g04580 pycom04g14890 pycom06g10790 pycom11g04930 pycom12g17060
rosa_chinensis	RchiOBHm_Chr3g0461481 RchiOBHm_Chr5g0071811
rosa_laevigata	RLG00000024931 RLG00000036250
rosa_multiflora	Rmu_sc0002677.1_g000005 Rmu_ssc0000127.1_g000054
rosa_roxburghii	Rroxscaffold_1G00009350 Rroxscaffold_6G00418250 Rroxscaffold_6G00418580
rosa_rugosa	Rorug03G0051000 Rorug03G0051100.1 Rorug05G0414700
rosa_samantha	Rh3AG108800 Rh3BG112700 Rh3CG114200 Rh3DG114300 Rh5AG471000 Rh5BG490700 Rh5CG514700 Rh5DG502000
rosa_wichuraiana	Rw3G009250 Rw5G043770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	113
AccB7I	CCANNNNNTGG	2 cut(s)	365, 1245
AccII	CGCG	1 cut(s)	880
AciI	CCGC	8 cut(s)	33, 141, 182, 224, 303, 878, 880, 1025
AclWI	GGATC	1 cut(s)	180
AcoI	YGGCCR	2 cut(s)	135, 847
AcsI	RAATTY	2 cut(s)	37, 1138
AcuI	CTGAAG	2 cut(s)	600, 636
AcyI	GRCGYC	1 cut(s)	114
AfaI	GTAC	5 cut(s)	161, 421, 746, 898, 1358
AfiI	CCNNNNNNNGG	8 cut(s)	15, 162, 365, 393, 498, 499, 644, 1245
AgsI	TTSAA	5 cut(s)	214, 808, 832, 1155, 1322
AjnI	CCWGG	4 cut(s)	289, 497, 1044, 1282
Alw21I	GWGCWC	2 cut(s)	462, 1184
Alw26I	GTCTC	1 cut(s)	267
AlwI	GGATC	1 cut(s)	180
AlwNI	CAGNNNCTG	1 cut(s)	1283
Ama87I	CYCGRG	2 cut(s)	46, 109
AoxI	GGCC	4 cut(s)	3, 135, 501, 847
ApaI	GGGCCC	1 cut(s)	505
ApeKI	GCWGC	2 cut(s)	377, 787
ApoI	RAATTY	2 cut(s)	37, 1138
AspLEI	GCGC	1 cut(s)	116
AspS9I	GGNCC	4 cut(s)	399, 501, 502, 590
AsuC2I	CCSGG	2 cut(s)	16, 157
AsuHPI	GGTGA	5 cut(s)	35, 49, 643, 946, 1271
AvaI	CYCGRG	2 cut(s)	46, 109
AvaII	GGWCC	2 cut(s)	399, 590
BaeGI	GKGCMC	1 cut(s)	505
BalI	TGGCCA	2 cut(s)	137, 849
BanI	GGYRCC	1 cut(s)	113
BanII	GRGCYC	3 cut(s)	302, 505, 1184
Bbv12I	GWGCWC	2 cut(s)	462, 1184
BbvI	GCAGC	2 cut(s)	389, 774
BccI	CCATC	7 cut(s)	361, 804, 818, 938, 993, 1239, 1346
BciT130I	CCWGG	4 cut(s)	291, 499, 1046, 1284
BclI	TGATCA	1 cut(s)	1174
BcnI	CCSGG	2 cut(s)	16, 157
BcoDI	GTCTC	1 cut(s)	267
BfaI	CTAG	2 cut(s)	587, 1005
BfoI	RGCGCY	1 cut(s)	117
BisI	GCNGC	3 cut(s)	378, 788, 1026
BlpI	GCTNAGC	1 cut(s)	708
BlsI	GCNGC	3 cut(s)	379, 789, 1027
Bme1390I	CCNGG	6 cut(s)	16, 157, 291, 499, 1046, 1284
Bme18I	GGWCC	2 cut(s)	399, 590
BmeT110I	CYCGRG	2 cut(s)	46, 109
BmgT120I	GGNCC	4 cut(s)	399, 501, 502, 590
BmiI	GGNNCC	3 cut(s)	115, 503, 504
BmrFI	CCNGG	6 cut(s)	16, 157, 291, 499, 1046, 1284
BmrI	ACTGGG	1 cut(s)	375
BmuI	ACTGGG	1 cut(s)	375
Bpu1102I	GCTNAGC	1 cut(s)	708
BpuEI	CTTGAG	1 cut(s)	366
BpuMI	CCSGG	2 cut(s)	16, 157
BsaHI	GRCGYC	1 cut(s)	114
BsaJI	CCNNGG	6 cut(s)	108, 290, 498, 878, 1283, 1406
BsaWI	WCCGGW	2 cut(s)	441, 1132
Bsc4I	CCNNNNNNNGG	8 cut(s)	15, 162, 365, 393, 498, 499, 644, 1245
Bse1I	ACTGG	1 cut(s)	370
BseBI	CCWGG	4 cut(s)	291, 499, 1046, 1284
BseDI	CCNNGG	6 cut(s)	108, 290, 498, 878, 1283, 1406
BseGI	GGATG	7 cut(s)	300, 949, 985, 1071, 1142, 1168, 1216
BseLI	CCNNNNNNNGG	8 cut(s)	15, 162, 365, 393, 498, 499, 644, 1245
BseMII	CTCAG	5 cut(s)	346, 486, 630, 722, 1199
BseNI	ACTGG	1 cut(s)	370
BseRI	GAGGAG	2 cut(s)	470, 1218
BseSI	GKGCMC	1 cut(s)	505
BseXI	GCAGC	2 cut(s)	389, 774
BseYI	CCCAGC	1 cut(s)	231
BsgI	GTGCAG	2 cut(s)	543, 677
Bsh1236I	CGCG	1 cut(s)	880
BshFI	GGCC	4 cut(s)	5, 137, 503, 849
BshNI	GGYRCC	1 cut(s)	113
BsiHKAI	GWGCWC	2 cut(s)	462, 1184
BsiHKCI	CYCGRG	2 cut(s)	46, 109
BsiSI	CCGG	4 cut(s)	15, 156, 442, 1133
BslFI	GGGAC	3 cut(s)	188, 202, 694
BslI	CCNNNNNNNGG	8 cut(s)	15, 162, 365, 393, 498, 499, 644, 1245
BsmAI	GTCTC	1 cut(s)	267
BsmFI	GGGAC	3 cut(s)	188, 202, 694
BsnI	GGCC	4 cut(s)	5, 137, 503, 849
BsoBI	CYCGRG	2 cut(s)	46, 109
Bsp120I	GGGCCC	1 cut(s)	501
Bsp1286I	GDGCHC	4 cut(s)	302, 462, 505, 1184
Bsp143I	GATC	5 cut(s)	172, 739, 815, 1078, 1174
Bsp1720I	GCTNAGC	1 cut(s)	708
BspACI	CCGC	8 cut(s)	33, 141, 182, 224, 303, 878, 880, 1025
BspANI	GGCC	4 cut(s)	5, 137, 503, 849
BspCNI	CTCAG	5 cut(s)	345, 485, 631, 721, 1198
BspFNI	CGCG	1 cut(s)	880
BspHI	TCATGA	1 cut(s)	78
BspLI	GGNNCC	3 cut(s)	115, 503, 504
BspPI	GGATC	1 cut(s)	180
BspQI	GCTCTTC	1 cut(s)	343
BspT107I	GGYRCC	1 cut(s)	113
BsrI	ACTGG	1 cut(s)	370
BssECI	CCNNGG	6 cut(s)	108, 290, 498, 878, 1283, 1406
BssMI	GATC	5 cut(s)	172, 739, 815, 1078, 1174
BssNI	GRCGYC	1 cut(s)	114
BssT1I	CCWWGG	1 cut(s)	1406
Bst2UI	CCWGG	4 cut(s)	291, 499, 1046, 1284
Bst4CI	ACNGT	1 cut(s)	1297
Bst6I	CTCTTC	5 cut(s)	16, 274, 343, 617, 673
BstACI	GRCGYC	1 cut(s)	114
BstC8I	GCNNGC	1 cut(s)	570
BstDEI	CTNAG	7 cut(s)	22, 332, 472, 639, 708, 918, 1185
BstDSI	CCRYGG	1 cut(s)	878
BstF5I	GGATG	7 cut(s)	300, 949, 985, 1071, 1142, 1168, 1216
BstFNI	CGCG	1 cut(s)	880
BstH2I	RGCGCY	1 cut(s)	117
BstHHI	GCGC	1 cut(s)	116
BstKTI	GATC	5 cut(s)	175, 742, 818, 1081, 1177
BstMAI	GTCTC	1 cut(s)	267
BstMBI	GATC	5 cut(s)	172, 739, 815, 1078, 1174
BstMWI	GCNNNNNNNGC	3 cut(s)	232, 383, 1046
BstNI	CCWGG	4 cut(s)	291, 499, 1046, 1284
BstSCI	CCNGG	6 cut(s)	14, 155, 289, 497, 1044, 1282
BstSLI	GKGCMC	1 cut(s)	505
BstUI	CGCG	1 cut(s)	880
BstV1I	GCAGC	2 cut(s)	389, 774
BsuRI	GGCC	4 cut(s)	5, 137, 503, 849
BtgI	CCRYGG	1 cut(s)	878
BtsCI	GGATG	7 cut(s)	300, 949, 985, 1071, 1142, 1168, 1216
BtsI	GCAGTG	1 cut(s)	727
BtsIMutI	CAGTG	4 cut(s)	660, 727, 806, 1302
Cac8I	GCNNGC	1 cut(s)	570
CaiI	CAGNNNCTG	1 cut(s)	1283
CciI	TCATGA	1 cut(s)	78
CfoI	GCGC	1 cut(s)	116
Cfr13I	GGNCC	4 cut(s)	399, 501, 502, 590
Cfr42I	CCGCGG	1 cut(s)	881
Csp6I	GTAC	5 cut(s)	160, 420, 745, 897, 1357
CspCI	CAANNNNNGTGG	2 cut(s)	703, 738
CviAII	CATG	4 cut(s)	79, 573, 1037, 1097
CviQI	GTAC	5 cut(s)	160, 420, 745, 897, 1357
DdeI	CTNAG	7 cut(s)	22, 332, 472, 639, 708, 918, 1185
DinI	GGCGCC	1 cut(s)	115
DpnI	GATC	5 cut(s)	174, 741, 817, 1080, 1176
DpnII	GATC	5 cut(s)	172, 739, 815, 1078, 1174
EaeI	YGGCCR	2 cut(s)	135, 847
Eam1104I	CTCTTC	5 cut(s)	16, 274, 343, 617, 673
EarI	CTCTTC	5 cut(s)	16, 274, 343, 617, 673
Ecl136II	GAGCTC	1 cut(s)	1182
Eco130I	CCWWGG	1 cut(s)	1406
Eco24I	GRGCYC	3 cut(s)	302, 505, 1184
Eco47I	GGWCC	2 cut(s)	399, 590
Eco53kI	GAGCTC	1 cut(s)	1182
Eco57I	CTGAAG	2 cut(s)	600, 636
Eco88I	CYCGRG	2 cut(s)	46, 109
EcoICRI	GAGCTC	1 cut(s)	1182
EcoO109I	RGGNCCY	3 cut(s)	501, 502, 590
EcoRI	GAATTC	1 cut(s)	1138
EcoRII	CCWGG	4 cut(s)	289, 497, 1044, 1282
EcoT14I	CCWWGG	1 cut(s)	1406
EcoT38I	GRGCYC	3 cut(s)	302, 505, 1184
EgeI	GGCGCC	1 cut(s)	115
EheI	GGCGCC	1 cut(s)	115
ErhI	CCWWGG	1 cut(s)	1406
FaeI	CATG	4 cut(s)	82, 576, 1040, 1100
FaqI	GGGAC	3 cut(s)	188, 202, 694
FatI	CATG	4 cut(s)	78, 572, 1036, 1096
FauI	CCCGC	2 cut(s)	231, 310
FbaI	TGATCA	1 cut(s)	1174
Fnu4HI	GCNGC	3 cut(s)	378, 788, 1026
FokI	GGATG	7 cut(s)	307, 956, 972, 1058, 1129, 1175, 1223
FriOI	GRGCYC	3 cut(s)	302, 505, 1184
Fsp4HI	GCNGC	3 cut(s)	378, 788, 1026
FspBI	CTAG	2 cut(s)	587, 1005
GlaI	GCGC	1 cut(s)	115
GluI	GCNGC	3 cut(s)	378, 788, 1026
GsaI	CCCAGC	1 cut(s)	235
HaeII	RGCGCY	1 cut(s)	117
HaeIII	GGCC	4 cut(s)	5, 137, 503, 849
HapII	CCGG	4 cut(s)	15, 156, 442, 1133
HhaI	GCGC	1 cut(s)	116
Hin1I	GRCGYC	1 cut(s)	114
Hin1II	CATG	4 cut(s)	82, 576, 1040, 1100
Hin6I	GCGC	1 cut(s)	114
HinP1I	GCGC	1 cut(s)	114
HinfI	GANTC	1 cut(s)	317
HpaII	CCGG	4 cut(s)	15, 156, 442, 1133
HphI	GGTGA	5 cut(s)	35, 49, 643, 946, 1271
Hpy166II	GTNNAC	2 cut(s)	897, 967
Hpy188III	TCNNGA	4 cut(s)	79, 314, 1200, 1346
Hpy8I	GTNNAC	2 cut(s)	897, 967
HpyAV	CCTTC	5 cut(s)	70, 100, 856, 1002, 1250
HpyCH4III	ACNGT	1 cut(s)	1297
HpyCH4V	TGCA	7 cut(s)	281, 377, 560, 658, 691, 790, 1040
HpyF10VI	GCNNNNNNNGC	3 cut(s)	232, 383, 1046
HpyF3I	CTNAG	7 cut(s)	22, 332, 472, 639, 708, 918, 1185
Hsp92I	GRCGYC	1 cut(s)	114
Hsp92II	CATG	4 cut(s)	82, 576, 1040, 1100
HspAI	GCGC	1 cut(s)	114
KasI	GGCGCC	1 cut(s)	113
Ksp22I	TGATCA	1 cut(s)	1174
KspI	CCGCGG	1 cut(s)	881
Kzo9I	GATC	5 cut(s)	172, 739, 815, 1078, 1174
LguI	GCTCTTC	1 cut(s)	343
LmnI	GCTCC	5 cut(s)	18, 184, 240, 457, 882
Lsp1109I	GCAGC	2 cut(s)	389, 774
MaeI	CTAG	2 cut(s)	587, 1005
MaeIII	GTNAC	2 cut(s)	1259, 1331
MalI	GATC	5 cut(s)	174, 741, 817, 1080, 1176
MboI	GATC	5 cut(s)	172, 739, 815, 1078, 1174
MfeI	CAATTG	1 cut(s)	832
MhlI	GDGCHC	4 cut(s)	302, 462, 505, 1184
MlsI	TGGCCA	2 cut(s)	137, 849
MluCI	AATT	9 cut(s)	37, 391, 525, 549, 832, 907, 1102, 1138, 1147
MluNI	TGGCCA	2 cut(s)	137, 849
Mly113I	GGCGCC	1 cut(s)	114
MlyI	GAGTC	1 cut(s)	311
MmeI	TCCRAC	5 cut(s)	120, 366, 383, 533, 921
Mox20I	TGGCCA	2 cut(s)	137, 849
MscI	TGGCCA	2 cut(s)	137, 849
MseI	TTAA	2 cut(s)	390, 450
Msp20I	TGGCCA	2 cut(s)	137, 849
MspA1I	CMGCKG	3 cut(s)	787, 880, 1025
MspI	CCGG	4 cut(s)	15, 156, 442, 1133
MspR9I	CCNGG	6 cut(s)	16, 157, 291, 499, 1046, 1284
MunI	CAATTG	1 cut(s)	832
MvaI	CCWGG	4 cut(s)	291, 499, 1046, 1284
MvnI	CGCG	1 cut(s)	880
MwoI	GCNNNNNNNGC	3 cut(s)	232, 383, 1046
NarI	GGCGCC	1 cut(s)	114
NciI	CCSGG	2 cut(s)	16, 157
NdeII	GATC	5 cut(s)	172, 739, 815, 1078, 1174
NlaIII	CATG	4 cut(s)	82, 576, 1040, 1100
NlaIV	GGNNCC	3 cut(s)	115, 503, 504
NmeAIII	GCCGAG	1 cut(s)	331
NmuCI	GTSAC	2 cut(s)	1259, 1331
PagI	TCATGA	1 cut(s)	78
PciSI	GCTCTTC	1 cut(s)	343
PflMI	CCANNNNNTGG	2 cut(s)	365, 1245
PfoI	TCCNGGA	1 cut(s)	14
PkrI	GCNGC	3 cut(s)	379, 789, 1027
PleI	GAGTC	1 cut(s)	311
PluTI	GGCGCC	1 cut(s)	117
PpsI	GAGTC	1 cut(s)	311
PpuMI	RGGWCCY	1 cut(s)	590
Psp124BI	GAGCTC	1 cut(s)	1184
Psp5II	RGGWCCY	1 cut(s)	590
Psp6I	CCWGG	4 cut(s)	289, 497, 1044, 1282
PspFI	CCCAGC	1 cut(s)	231
PspGI	CCWGG	4 cut(s)	289, 497, 1044, 1282
PspN4I	GGNNCC	3 cut(s)	115, 503, 504
PspOMI	GGGCCC	1 cut(s)	501
PspPI	GGNCC	4 cut(s)	399, 501, 502, 590
PspPPI	RGGWCCY	1 cut(s)	590
PstNI	CAGNNNCTG	1 cut(s)	1283
PvuII	CAGCTG	1 cut(s)	787
RsaI	GTAC	5 cut(s)	161, 421, 746, 898, 1358
RsaNI	GTAC	5 cut(s)	160, 420, 745, 897, 1357
SacI	GAGCTC	1 cut(s)	1184
SacII	CCGCGG	1 cut(s)	881
SapI	GCTCTTC	1 cut(s)	343
SaqAI	TTAA	2 cut(s)	390, 450
SatI	GCNGC	3 cut(s)	378, 788, 1026
Sau3AI	GATC	5 cut(s)	172, 739, 815, 1078, 1174
Sau96I	GGNCC	4 cut(s)	399, 501, 502, 590
SchI	GAGTC	1 cut(s)	311
ScrFI	CCNGG	6 cut(s)	16, 157, 291, 499, 1046, 1284
SduI	GDGCHC	4 cut(s)	302, 462, 505, 1184
SfoI	GGCGCC	1 cut(s)	115
Sfr303I	CCGCGG	1 cut(s)	881
SgrBI	CCGCGG	1 cut(s)	881
SinI	GGWCC	2 cut(s)	399, 590
SmlI	CTYRAG	1 cut(s)	381
SmoI	CTYRAG	1 cut(s)	381
Sse9I	AATT	9 cut(s)	37, 391, 525, 549, 832, 907, 1102, 1138, 1147
SsiI	CCGC	8 cut(s)	33, 141, 182, 224, 303, 878, 880, 1025
SspDI	GGCGCC	1 cut(s)	113
SspI	AATATT	1 cut(s)	406
SspMI	CTAG	2 cut(s)	587, 1005
SstI	GAGCTC	1 cut(s)	1184
StyD4I	CCNGG	6 cut(s)	14, 155, 289, 497, 1044, 1282
StyI	CCWWGG	1 cut(s)	1406
TaaI	ACNGT	1 cut(s)	1297
TaqI	TCGA	1 cut(s)	315
TasI	AATT	9 cut(s)	37, 391, 525, 549, 832, 907, 1102, 1138, 1147
TatI	WGTACW	2 cut(s)	744, 896
TauI	GCSGC	1 cut(s)	1028
Tru1I	TTAA	2 cut(s)	390, 450
Tru9I	TTAA	2 cut(s)	390, 450
TscAI	CASTG	4 cut(s)	660, 727, 806, 1302
TseFI	GTSAC	2 cut(s)	1259, 1331
TseI	GCWGC	2 cut(s)	377, 787
Tsp45I	GTSAC	2 cut(s)	1259, 1331
TspDTI	ATGAA	6 cut(s)	67, 504, 1008, 1131, 1236, 1281
TspRI	CASTG	4 cut(s)	660, 727, 806, 1302
Van91I	CCANNNNNTGG	2 cut(s)	365, 1245
VpaK11BI	GGWCC	2 cut(s)	399, 590
XapI	RAATTY	2 cut(s)	37, 1138
XcmI	CCANNNNNNNNNTGG	1 cut(s)	130
XspI	CTAG	2 cut(s)	587, 1005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.