Prupe.6G095700_v2.0.a1

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
6634626 .. 6637946
3321 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G095700.2

Sequence Viewer

Length: 1344 bp
ATGGGTAAAGAGAAGTTCCACATCAACATTGTGGTCATTGGCCATGTCGACTCTGGTAAGTCGACTACCACTGGTCACTTGATCTACAAGCTTGGTGGTATCGACAAGCGTGTTATCGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTGGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACAATTGATATTGCCTTGTGGAAGTTTGAGACCACCAAGTACTACTGCACTGTTATTGATGCTCCTGGACATCGTGACTTTATCAAGAACATGATTACTGGCACCTCCCAGGCTGACTGTGCCATCCTCATTATTGACTCCACCACTGGTGGTTTTGAAGCCGGCATTTCCAAGGATGGTCAGACCCGAGAGCATGCTTTACTTGCTTTTACTCTTGGTGTTAGGCAGATGATTTGCTGCTGTAACAAGATGGATGCCACCACTCCCAAGTACTCAAAGGCAAGGTACGATGAAATTGTGAAGGAAGTCTCATCCTATCTCAAGAAGGTCGGGTACAACCCAGAAAAGATCCCCTTTGTGCCCATTTCTGGGTTCGAGGGTGACAACATGATTGAGAGGTCCACCAACCTTGACTGGTACAAGGGACCCACCCTTCTTGAGGCCCTTGACTTGATCAGTGAGCCCAAGAGACCATCAGACAAGCCCCTTCGACTTCCACTTCAGGATGTGTACAAGATTGGTGGTATTGGTACCGTCCCTGTTGGACGAGTTGAGACTGGTACCCTGAAGCCTGGTATGCTTGTGACTTTTGCCCCCACTGGGCTGACTACTGAAGTTAAGTCTGTGGAGATGCACCATGAATCTCTCCAAGAGGCCCTTCCAGGTGACAATGTTGGATTCAACGTGAAGAATGTTGCTGTTAAGGATCTCAAGCGTGGTTATGTTGCTTCCAACTCCAAGGATGATCCTGCAAAGGAAGCAGCAAACTTTACCGCTCAGGTCATCATCATGAACCACCCTGGCCAGATTGGACAAGGATATGCTCCTGTTCTTGACTGTCACACCTCCCACATTGCTGTTAAATTTGCTGAGATGTTGACAAAGATTGACAGGCGATCTGGTAAGGAACTGGAAAAGGAGCCCAAGTTCTTGAAGAATGGTGATGCTGGATTTGTGAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACCTTCTCTGAGTACCCCCCACTTGGACGATTTGCTGTGAGGGACATGCGACAGACTGTTGCTGTTGGTGTCATCAAGAGTGTTGAGAAGAAGGATCCAACTGGTGCTAAGATCACTAAGGCCGCTGCTAAGAAGAAGTGA

Protein Analysis

448

Amino Acids

49.47

Weight (kDa)

9.15

Isoelectric Point (pI)

32.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 743, 773
AccB1I GGYRCC 3 cut(s) 314, 743, 773
AccBSI CCGCTC 1 cut(s) 989
AccI GTMKAC 2 cut(s) 48, 62
AciI CCGC 2 cut(s) 987, 1326
AclWI GGATC 5 cut(s) 556, 927, 953, 1292, 1305
AcoI YGGCCR 2 cut(s) 40, 1015
AcsI RAATTY 1 cut(s) 1076
AcuI CTGAAG 3 cut(s) 698, 800, 846
AfaI GTAC 9 cut(s) 254, 485, 500, 548, 632, 725, 745, 775, 1217
AfiI CCNNNNNNNGG 5 cut(s) 581, 582, 652, 813, 1226
AgsI TTSAA 4 cut(s) 163, 371, 895, 1147
AjnI CCWGG 6 cut(s) 170, 277, 321, 784, 874, 1012
AjuI GAANNNNNNNTTGG 2 cut(s) 855, 887
AloI GAACNNNNNNTCC 2 cut(s) 1124, 1156
AluBI AGCT 3 cut(s) 91, 137, 187
AluI AGCT 3 cut(s) 91, 137, 187
Alw26I GTCTC 5 cut(s) 236, 526, 676, 761, 1196
AlwI GGATC 5 cut(s) 556, 927, 953, 1292, 1305
Ama87I CYCGRG 1 cut(s) 399
AoxI GGCC 5 cut(s) 40, 654, 867, 1015, 1323
ApeKI GCWGC 4 cut(s) 137, 450, 974, 1328
ApoI RAATTY 1 cut(s) 1076
Asp718I GGTACC 2 cut(s) 743, 773
AspS9I GGNCC 4 cut(s) 612, 638, 655, 868
AsuHPI GGTGA 3 cut(s) 605, 890, 1166
AvaI CYCGRG 1 cut(s) 399
AvaII GGWCC 2 cut(s) 612, 638
BaeGI GKGCMC 1 cut(s) 576
BalI TGGCCA 2 cut(s) 42, 1017
BamHI GGATCC 1 cut(s) 1297
BanI GGYRCC 3 cut(s) 314, 743, 773
BanII GRGCYC 2 cut(s) 678, 1137
BarI GAAGNNNNNNTAC 2 cut(s) 530, 562
BbvI GCAGC 4 cut(s) 124, 437, 986, 1315
BccI CCATC 4 cut(s) 344, 383, 457, 694
BciT130I CCWGG 6 cut(s) 172, 279, 323, 786, 876, 1014
BclI TGATCA 1 cut(s) 666
BcoDI GTCTC 5 cut(s) 236, 526, 676, 761, 1196
BisI GCNGC 5 cut(s) 138, 451, 975, 1326, 1329
BlpI GCTNAGC 1 cut(s) 195
BlsI GCNGC 5 cut(s) 139, 452, 976, 1327, 1330
BmcAI AGTACT 2 cut(s) 254, 485
Bme1390I CCNGG 6 cut(s) 172, 279, 323, 786, 876, 1014
Bme18I GGWCC 2 cut(s) 612, 638
BmeT110I CYCGRG 1 cut(s) 399
BmgT120I GGNCC 4 cut(s) 612, 638, 655, 868
BmiI GGNNCC 7 cut(s) 316, 639, 640, 745, 775, 1134, 1299
BmrFI CCNGG 6 cut(s) 172, 279, 323, 786, 876, 1014
BmrI ACTGGG 1 cut(s) 822
BmsI GCATC 4 cut(s) 262, 457, 834, 1147
BmuI ACTGGG 1 cut(s) 822
BplI GAGNNNNNCTC 2 cut(s) 1193, 1225
Bpu10I CCTNAGC 1 cut(s) 990
Bpu1102I GCTNAGC 1 cut(s) 195
BpuEI CTTGAG 4 cut(s) 173, 518, 671, 908
BsaI GGTCTC 3 cut(s) 236, 676, 1196
BsaJI CCNNGG 6 cut(s) 171, 321, 384, 951, 1012, 1191
BsaXI ACNNNNNCTCC 2 cut(s) 1124, 1154
Bsc4I CCNNNNNNNGG 5 cut(s) 581, 582, 652, 813, 1226
Bse118I RCCGGY 1 cut(s) 374
Bse1I ACTGG 8 cut(s) 76, 316, 364, 632, 775, 817, 1128, 1309
Bse3DI GCAATG 1 cut(s) 1065
BseBI CCWGG 6 cut(s) 172, 279, 323, 786, 876, 1014
BseDI CCNNGG 6 cut(s) 171, 321, 384, 951, 1012, 1191
BseGI GGATG 6 cut(s) 336, 394, 472, 524, 724, 961
BseLI CCNNNNNNNGG 5 cut(s) 581, 582, 652, 813, 1226
BseMI GCAATG 1 cut(s) 1065
BseMII CTCAG 5 cut(s) 132, 186, 1004, 1074, 1203
BseNI ACTGG 8 cut(s) 76, 316, 364, 632, 775, 817, 1128, 1309
BseSI GKGCMC 1 cut(s) 576
BseXI GCAGC 4 cut(s) 124, 437, 986, 1315
BsgI GTGCAG 1 cut(s) 244
BshFI GGCC 5 cut(s) 42, 656, 869, 1017, 1325
BshNI GGYRCC 3 cut(s) 314, 743, 773
BsiHKCI CYCGRG 1 cut(s) 399
BsiSI CCGG 1 cut(s) 375
BslFI GGGAC 3 cut(s) 651, 734, 1259
BslI CCNNNNNNNGG 5 cut(s) 581, 582, 652, 813, 1226
BsmAI GTCTC 5 cut(s) 236, 526, 676, 761, 1196
BsmFI GGGAC 3 cut(s) 651, 734, 1259
BsnI GGCC 5 cut(s) 42, 656, 869, 1017, 1325
Bso31I GGTCTC 3 cut(s) 236, 676, 1196
BsoBI CYCGRG 1 cut(s) 399
Bsp1286I GDGCHC 3 cut(s) 576, 678, 1137
Bsp1407I TGTACA 1 cut(s) 723
Bsp143I GATC 8 cut(s) 81, 561, 666, 919, 958, 1109, 1297, 1314
Bsp1720I GCTNAGC 1 cut(s) 195
Bsp19I CCATGG 1 cut(s) 1191
BspACI CCGC 2 cut(s) 987, 1326
BspANI GGCC 5 cut(s) 42, 656, 869, 1017, 1325
BspCNI CTCAG 5 cut(s) 133, 187, 1003, 1075, 1204
BspHI TCATGA 1 cut(s) 1002
BspLI GGNNCC 7 cut(s) 316, 639, 640, 745, 775, 1134, 1299
BspPI GGATC 5 cut(s) 556, 927, 953, 1292, 1305
BspT107I GGYRCC 3 cut(s) 314, 743, 773
BspTNI GGTCTC 3 cut(s) 236, 676, 1196
BsrBI CCGCTC 1 cut(s) 989
BsrDI GCAATG 1 cut(s) 1065
BsrFI RCCGGY 1 cut(s) 374
BsrGI TGTACA 1 cut(s) 723
BsrI ACTGG 8 cut(s) 76, 316, 364, 632, 775, 817, 1128, 1309
BssAI RCCGGY 1 cut(s) 374
BssECI CCNNGG 6 cut(s) 171, 321, 384, 951, 1012, 1191
BssMI GATC 8 cut(s) 81, 561, 666, 919, 958, 1109, 1297, 1314
BssT1I CCWWGG 3 cut(s) 384, 951, 1191
Bst2UI CCWGG 6 cut(s) 172, 279, 323, 786, 876, 1014
Bst4CI ACNGT 5 cut(s) 265, 332, 748, 1052, 1261
BstAUI TGTACA 1 cut(s) 723
BstC8I GCNNGC 2 cut(s) 376, 408
BstDEI CTNAG 8 cut(s) 141, 195, 990, 1083, 1212, 1311, 1320, 1332
BstDSI CCRYGG 1 cut(s) 1191
BstENI CCTNNNNNAGG 1 cut(s) 650
BstF5I GGATG 6 cut(s) 336, 394, 472, 524, 724, 961
BstKTI GATC 8 cut(s) 84, 564, 669, 922, 961, 1112, 1300, 1317
BstMAI GTCTC 5 cut(s) 236, 526, 676, 761, 1196
BstMBI GATC 8 cut(s) 81, 561, 666, 919, 958, 1109, 1297, 1314
BstMWI GCNNNNNNNGC 5 cut(s) 184, 332, 416, 790, 971
BstNI CCWGG 6 cut(s) 172, 279, 323, 786, 876, 1014
BstNSI RCATGY 2 cut(s) 410, 1252
BstSCI CCNGG 6 cut(s) 170, 277, 321, 784, 874, 1012
BstSLI GKGCMC 1 cut(s) 576
BstV1I GCAGC 4 cut(s) 124, 437, 986, 1315
BstX2I RGATCY 3 cut(s) 561, 919, 1297
BstXI CCANNNNNNTGG 1 cut(s) 1192
BstYI RGATCY 3 cut(s) 561, 919, 1297
BsuRI GGCC 5 cut(s) 42, 656, 869, 1017, 1325
BtgI CCRYGG 1 cut(s) 1191
BtsCI GGATG 6 cut(s) 336, 394, 472, 524, 724, 961
BtsIMutI CAGTG 5 cut(s) 69, 261, 357, 676, 810
Cac8I GCNNGC 2 cut(s) 376, 408
CciI TCATGA 1 cut(s) 1002
Cfr10I RCCGGY 1 cut(s) 374
Cfr13I GGNCC 4 cut(s) 612, 638, 655, 868
Csp6I GTAC 9 cut(s) 253, 484, 499, 547, 631, 724, 744, 774, 1216
CspCI CAANNNNNGTGG 8 cut(s) 76, 111, 604, 631, 639, 666, 715, 750
CviAII CATG 8 cut(s) 44, 304, 407, 601, 851, 1003, 1192, 1249
CviQI GTAC 9 cut(s) 253, 484, 499, 547, 631, 724, 744, 774, 1216
DdeI CTNAG 8 cut(s) 141, 195, 990, 1083, 1212, 1311, 1320, 1332
DpnI GATC 8 cut(s) 83, 563, 668, 921, 960, 1111, 1299, 1316
DpnII GATC 8 cut(s) 81, 561, 666, 919, 958, 1109, 1297, 1314
EaeI YGGCCR 2 cut(s) 40, 1015
Eco130I CCWWGG 3 cut(s) 384, 951, 1191
Eco24I GRGCYC 2 cut(s) 678, 1137
Eco31I GGTCTC 3 cut(s) 236, 676, 1196
Eco47I GGWCC 2 cut(s) 612, 638
Eco57I CTGAAG 3 cut(s) 698, 800, 846
Eco88I CYCGRG 1 cut(s) 399
EcoNI CCTNNNNNAGG 1 cut(s) 650
EcoO109I RGGNCCY 3 cut(s) 638, 655, 868
EcoRII CCWGG 6 cut(s) 170, 277, 321, 784, 874, 1012
EcoT14I CCWWGG 3 cut(s) 384, 951, 1191
EcoT38I GRGCYC 2 cut(s) 678, 1137
ErhI CCWWGG 3 cut(s) 384, 951, 1191
FaeI CATG 8 cut(s) 47, 307, 410, 604, 854, 1006, 1195, 1252
FalI AAGNNNNNCTT 4 cut(s) 551, 583, 855, 887
FaqI GGGAC 3 cut(s) 651, 734, 1259
FatI CATG 8 cut(s) 43, 303, 406, 600, 850, 1002, 1191, 1248
FbaI TGATCA 1 cut(s) 666
FblI GTMKAC 2 cut(s) 48, 62
Fnu4HI GCNGC 5 cut(s) 138, 451, 975, 1326, 1329
FokI GGATG 6 cut(s) 323, 401, 479, 511, 731, 968
FriOI GRGCYC 2 cut(s) 678, 1137
Fsp4HI GCNGC 5 cut(s) 138, 451, 975, 1326, 1329
GluI GCNGC 5 cut(s) 138, 451, 975, 1326, 1329
HaeIII GGCC 5 cut(s) 42, 656, 869, 1017, 1325
HapII CCGG 1 cut(s) 375
Hin1II CATG 8 cut(s) 47, 307, 410, 604, 854, 1006, 1195, 1252
HincII GTYRAC 3 cut(s) 49, 63, 1092
HindII GTYRAC 3 cut(s) 49, 63, 1092
HindIII AAGCTT 1 cut(s) 89
HinfI GANTC 5 cut(s) 50, 350, 854, 891, 1177
HpaII CCGG 1 cut(s) 375
HphI GGTGA 3 cut(s) 605, 890, 1166
Hpy166II GTNNAC 6 cut(s) 49, 63, 203, 615, 724, 1092
Hpy188I TCNGA 3 cut(s) 396, 691, 1213
Hpy8I GTNNAC 6 cut(s) 49, 63, 203, 615, 724, 1092
HpyAV CCTTC 8 cut(s) 124, 508, 532, 656, 710, 881, 1216, 1288
HpyCH4III ACNGT 5 cut(s) 265, 332, 748, 1052, 1261
HpyCH4IV ACGT 2 cut(s) 205, 897
HpyCH4V TGCA 3 cut(s) 261, 847, 965
HpyF10VI GCNNNNNNNGC 5 cut(s) 184, 332, 416, 790, 971
HpyF3I CTNAG 8 cut(s) 141, 195, 990, 1083, 1212, 1311, 1320, 1332
HpySE526I ACGT 2 cut(s) 205, 897
Hsp92II CATG 8 cut(s) 47, 307, 410, 604, 854, 1006, 1195, 1252
KflI GGGWCCC 1 cut(s) 638
KpnI GGTACC 2 cut(s) 747, 777
KroI GCCGGC 1 cut(s) 374
KroNI GCCGGC 1 cut(s) 376
Ksp22I TGATCA 1 cut(s) 666
Kzo9I GATC 8 cut(s) 81, 561, 666, 919, 958, 1109, 1297, 1314
LmnI GCTCC 3 cut(s) 280, 1042, 1132
Lsp1109I GCAGC 4 cut(s) 124, 437, 986, 1315
LweI GCATC 4 cut(s) 262, 457, 834, 1147
MaeII ACGT 2 cut(s) 205, 897
MaeIII GTNAC 7 cut(s) 74, 287, 455, 593, 796, 878, 1052
MalI GATC 8 cut(s) 83, 563, 668, 921, 960, 1111, 1299, 1316
MbiI CCGCTC 1 cut(s) 989
MboI GATC 8 cut(s) 81, 561, 666, 919, 958, 1109, 1297, 1314
MboII GAAGA 4 cut(s) 913, 1159, 1183, 1303
MfeI CAATTG 1 cut(s) 216
MflI RGATCY 3 cut(s) 561, 919, 1297
MhlI GDGCHC 3 cut(s) 576, 678, 1137
MlsI TGGCCA 2 cut(s) 42, 1017
MluCI AATT 3 cut(s) 216, 507, 1076
MluNI TGGCCA 2 cut(s) 42, 1017
MlyI GAGTC 2 cut(s) 44, 344
MmeI TCCRAC 4 cut(s) 736, 868, 969, 1325
Mox20I TGGCCA 2 cut(s) 42, 1017
MroNI GCCGGC 1 cut(s) 374
MscI TGGCCA 2 cut(s) 42, 1017
MseI TTAA 3 cut(s) 831, 915, 1074
MslI CAYNNNNRTG 1 cut(s) 1001
Msp20I TGGCCA 2 cut(s) 42, 1017
MspA1I CMGCKG 1 cut(s) 1328
MspI CCGG 1 cut(s) 375
MspR9I CCNGG 6 cut(s) 172, 279, 323, 786, 876, 1014
MunI CAATTG 1 cut(s) 216
MvaI CCWGG 6 cut(s) 172, 279, 323, 786, 876, 1014
MwoI GCNNNNNNNGC 5 cut(s) 184, 332, 416, 790, 971
NaeI GCCGGC 1 cut(s) 376
NcoI CCATGG 1 cut(s) 1191
NdeII GATC 8 cut(s) 81, 561, 666, 919, 958, 1109, 1297, 1314
NgoMIV GCCGGC 1 cut(s) 374
NlaIII CATG 8 cut(s) 47, 307, 410, 604, 854, 1006, 1195, 1252
NlaIV GGNNCC 7 cut(s) 316, 639, 640, 745, 775, 1134, 1299
NmuCI GTSAC 6 cut(s) 74, 287, 593, 796, 878, 1052
NspI RCATGY 2 cut(s) 410, 1252
PaeI GCATGC 1 cut(s) 410
PagI TCATGA 1 cut(s) 1002
PdiI GCCGGC 1 cut(s) 376
PfeI GAWTC 3 cut(s) 854, 891, 1177
PfoI TCCNGGA 1 cut(s) 277
PkrI GCNGC 5 cut(s) 139, 452, 976, 1327, 1330
PleI GAGTC 2 cut(s) 44, 344
PpsI GAGTC 2 cut(s) 44, 344
PpuMI RGGWCCY 1 cut(s) 638
Psp5II RGGWCCY 1 cut(s) 638
Psp6I CCWGG 6 cut(s) 170, 277, 321, 784, 874, 1012
PspGI CCWGG 6 cut(s) 170, 277, 321, 784, 874, 1012
PspN4I GGNNCC 7 cut(s) 316, 639, 640, 745, 775, 1134, 1299
PspPI GGNCC 4 cut(s) 612, 638, 655, 868
PspPPI RGGWCCY 1 cut(s) 638
PsuI RGATCY 3 cut(s) 561, 919, 1297
RsaI GTAC 9 cut(s) 254, 485, 500, 548, 632, 725, 745, 775, 1217
RsaNI GTAC 9 cut(s) 253, 484, 499, 547, 631, 724, 744, 774, 1216
RseI CAYNNNNRTG 1 cut(s) 1001
SalI GTCGAC 2 cut(s) 47, 61
SaqAI TTAA 3 cut(s) 831, 915, 1074
SatI GCNGC 5 cut(s) 138, 451, 975, 1326, 1329
Sau3AI GATC 8 cut(s) 81, 561, 666, 919, 958, 1109, 1297, 1314
Sau96I GGNCC 4 cut(s) 612, 638, 655, 868
ScaI AGTACT 2 cut(s) 254, 485
SchI GAGTC 2 cut(s) 44, 344
ScrFI CCNGG 6 cut(s) 172, 279, 323, 786, 876, 1014
SduI GDGCHC 3 cut(s) 576, 678, 1137
SfaNI GCATC 4 cut(s) 262, 457, 834, 1147
SinI GGWCC 2 cut(s) 612, 638
SmiMI CAYNNNNRTG 1 cut(s) 1001
SmlI CTYRAG 4 cut(s) 188, 533, 650, 923
SmoI CTYRAG 4 cut(s) 188, 533, 650, 923
SphI GCATGC 1 cut(s) 410
Sse9I AATT 3 cut(s) 216, 507, 1076
SsiI CCGC 2 cut(s) 987, 1326
StyD4I CCNGG 6 cut(s) 170, 277, 321, 784, 874, 1012
StyI CCWWGG 3 cut(s) 384, 951, 1191
TaaI ACNGT 5 cut(s) 265, 332, 748, 1052, 1261
TaiI ACGT 2 cut(s) 208, 900
TaqI TCGA 6 cut(s) 48, 62, 102, 117, 588, 703
TasI AATT 3 cut(s) 216, 507, 1076
TatI WGTACW 3 cut(s) 252, 483, 723
TauI GCSGC 1 cut(s) 1328
TfiI GAWTC 3 cut(s) 854, 891, 1177
Tru1I TTAA 3 cut(s) 831, 915, 1074
Tru9I TTAA 3 cut(s) 831, 915, 1074
TscAI CASTG 5 cut(s) 76, 268, 364, 676, 817
TseFI GTSAC 6 cut(s) 74, 287, 593, 796, 878, 1052
TseI GCWGC 4 cut(s) 137, 450, 974, 1328
Tsp45I GTSAC 6 cut(s) 74, 287, 593, 796, 878, 1052
TspDTI ATGAA 4 cut(s) 161, 519, 867, 1019
TspRI CASTG 5 cut(s) 76, 268, 364, 676, 817
VpaK11BI GGWCC 2 cut(s) 612, 638
XagI CCTNNNNNAGG 1 cut(s) 650
XapI RAATTY 1 cut(s) 1076
XceI RCATGY 2 cut(s) 410, 1252
XcmI CCANNNNNNNNNTGG 2 cut(s) 50, 1189
XmiI GTMKAC 2 cut(s) 48, 62
ZrmI AGTACT 2 cut(s) 254, 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.