pycom11g10850

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
9215499 .. 9216844
1346 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g10850.1

Sequence Viewer

Length: 1149 bp
ATGGGTAAAGAGAAGTTCCACATCAACATTGTGGTCATTGGCCATGTCGACTCTGGGAAGTCGACCACCACTGGTCACTTGATCGACAAGCTTGGTGGTATTGAAAAGCGTGTTATGGAGAGGTTCGAGAAGGAGGCTTCTGAGATGAACAAGAGGTCAGTCAAGTATGCCTGGGTGTTGGACAAGCTTAAGGCTGAGCGTGAACGTGGTATTACCATTGACATTGCCCTGTGGAAGTTCGAGACCACCAAGTACTACTGCACTGTCATTGATGCTCCTGGACATCGTGACTTTATCAAGAACATGATTACTGGAACCTCACAGGCTGACTGTGCCATTCTCATCATTGACTCTACCACTGGAGGTTTTGAAGCCGGTATTTCCAAGGATGGTCAGACCCGTGAGCATGCTTTGCTTGCTTTCACTCTTGGTGTCAGGCAAATGATTTGCTGCTGCAACAAGATGGATGCCACCACTCCCAAGTACTCAAGGGCAAGGTATGATGAAATTGTGAAGGAAGTTTCGTCCTATCTCAAGAAGGTTGGCTACAACCCAGACAAGATTCCCTTTGTCCCCATTTCTGGGTTCGAGGGTGACAACATGATTGAGAGGTCCACCAACCTTGACTGGTACAAGGGTCCCACCCTTCTCGAGGCTCTTGACCAGATCCACGAGCCCAAGAGGCCCTCAGACAAGCCCCTCCGGCTTCCACTTCAGGATGTGTACAAGATTGGTGGTATCGGTACCGTCCCCGTTGGACGTGTTGAGACTGGTGTCATTAAGCCTGGTATGGTGGTGACTTTTGGCCCAACTGGTCTGACTACTGAGGTCAAGTCTGTTGAGATGCACCATGAAGCTATGCAGGAGGCCCTTCCAGGTGATAATGTTGGATTCAACGTTAAGAATGTTGCTGTCAAGGATCTCAAGCGTGGGTATGTTGCTTCCAACTCCAAGGATGATCCCGCAAAGGAGGCTGCCAACTTTACCGCTCAGGTCATCATTATGAACCACCCCGGCCAGATTGGACAGGGATATGCTCCAGTTCTCGACTGTCACACCTCCCACATTGCTGTCAAGTTTGCTGAGCTCGTTACAAAGATCGACAGGATCGATCTGGCAAGGAGCTTGAGAAGGAGCCCAAGTTTTTGA

Protein Analysis

383

Amino Acids

42.36

Weight (kDa)

8.55

Isoelectric Point (pI)

37.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_EFTU PF00009 7 - 223 1e-57 Elongation factor Tu GTP binding domain
GTP_EFTU_D2 PF03144 248 - 313 2.9e-17 Elongation factor Tu domain 2
GTP_EFTU_D3 PF03143 322 - 368 7.8e-10 Elongation factor Tu C-terminal domain
GTP-eEF1A_C PF22594 327 - 373 7e-11 GTP-eEF1A C-terminal domain-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 743
AccB1I GGYRCC 1 cut(s) 743
AccBSI CCGCTC 1 cut(s) 989
AccI GTMKAC 2 cut(s) 48, 62
AciI CCGC 2 cut(s) 963, 987
AclI AACGTT 1 cut(s) 897
AclWI GGATC 4 cut(s) 661, 927, 953, 1115
AcoI YGGCCR 2 cut(s) 40, 1015
AcuI CTGAAG 1 cut(s) 698
AfaI GTAC 5 cut(s) 254, 485, 632, 725, 745
AfiI CCNNNNNNNGG 3 cut(s) 581, 582, 652
AflII CTTAAG 1 cut(s) 188
AflIII ACRYGT 1 cut(s) 760
AgsI TTSAA 3 cut(s) 104, 371, 895
AjiI CACGTC 1 cut(s) 761
AjnI CCWGG 4 cut(s) 170, 277, 784, 874
AluBI AGCT 5 cut(s) 91, 187, 857, 1087, 1125
AluI AGCT 5 cut(s) 91, 187, 857, 1087, 1125
Alw21I GWGCWC 1 cut(s) 1089
Alw26I GTCTC 2 cut(s) 236, 761
AlwI GGATC 4 cut(s) 661, 927, 953, 1115
Ama87I CYCGRG 1 cut(s) 650
AoxI GGCC 5 cut(s) 40, 683, 805, 867, 1015
ApeKI GCWGC 3 cut(s) 450, 453, 974
Asp718I GGTACC 1 cut(s) 743
AspS9I GGNCC 5 cut(s) 612, 638, 684, 806, 868
AsuC2I CCSGG 1 cut(s) 1014
AsuHPI GGTGA 3 cut(s) 605, 808, 890
AvaI CYCGRG 1 cut(s) 650
AvaII GGWCC 2 cut(s) 612, 638
BaeI ACNNNNGTAYC 2 cut(s) 622, 655
BalI TGGCCA 1 cut(s) 42
BanI GGYRCC 1 cut(s) 743
BanII GRGCYC 3 cut(s) 678, 1089, 1139
BarI GAAGNNNNNNTAC 2 cut(s) 530, 562
BauI CACGAG 1 cut(s) 671
Bbv12I GWGCWC 1 cut(s) 1089
BbvI GCAGC 3 cut(s) 437, 440, 961
BccI CCATC 2 cut(s) 383, 457
BciT130I CCWGG 4 cut(s) 172, 279, 786, 876
BcnI CCSGG 1 cut(s) 1014
BcoDI GTCTC 2 cut(s) 236, 761
BfrI CTTAAG 1 cut(s) 188
BglI GCCNNNNNGGC 2 cut(s) 682, 703
BisI GCNGC 3 cut(s) 451, 454, 975
BlpI GCTNAGC 2 cut(s) 195, 1083
BlsI GCNGC 3 cut(s) 452, 455, 976
BmcAI AGTACT 2 cut(s) 254, 485
Bme1390I CCNGG 5 cut(s) 172, 279, 786, 876, 1014
Bme18I GGWCC 2 cut(s) 612, 638
BmeT110I CYCGRG 1 cut(s) 650
BmgBI CACGTC 1 cut(s) 761
BmgT120I GGNCC 5 cut(s) 612, 638, 684, 806, 868
BmiI GGNNCC 5 cut(s) 316, 639, 640, 745, 1136
BmrFI CCNGG 5 cut(s) 172, 279, 786, 876, 1014
BmsI GCATC 3 cut(s) 262, 457, 834
BoxI GACNNNNGTC 1 cut(s) 773
BpmI CTGGAG 2 cut(s) 381, 1023
Bpu10I CCTNAGC 1 cut(s) 990
Bpu1102I GCTNAGC 2 cut(s) 195, 1083
BpuEI CTTGAG 4 cut(s) 472, 518, 908, 1147
BpuMI CCSGG 1 cut(s) 1014
Bsa29I ATCGAT 1 cut(s) 1110
BsaI GGTCTC 1 cut(s) 236
BsaJI CCNNGG 4 cut(s) 171, 384, 951, 1012
BsaXI ACNNNNNCTCC 1 cut(s) 1126
Bsc4I CCNNNNNNNGG 3 cut(s) 581, 582, 652
Bse118I RCCGGY 1 cut(s) 374
Bse1I ACTGG 7 cut(s) 76, 316, 364, 632, 775, 817, 1040
Bse3DI GCAATG 2 cut(s) 222, 1065
BseBI CCWGG 4 cut(s) 172, 279, 786, 876
BseCI ATCGAT 1 cut(s) 1110
BseDI CCNNGG 4 cut(s) 171, 384, 951, 1012
BseGI GGATG 4 cut(s) 394, 472, 724, 961
BseLI CCNNNNNNNGG 3 cut(s) 581, 582, 652
BseMI GCAATG 2 cut(s) 222, 1065
BseMII CTCAG 6 cut(s) 132, 186, 702, 816, 1004, 1074
BseNI ACTGG 7 cut(s) 76, 316, 364, 632, 775, 817, 1040
BseXI GCAGC 3 cut(s) 437, 440, 961
BsgI GTGCAG 1 cut(s) 244
BshFI GGCC 5 cut(s) 42, 685, 807, 869, 1017
BshNI GGYRCC 1 cut(s) 743
BshVI ATCGAT 1 cut(s) 1110
BsiHKAI GWGCWC 1 cut(s) 1089
BsiHKCI CYCGRG 1 cut(s) 650
BsiSI CCGG 3 cut(s) 375, 703, 1014
BslFI GGGAC 3 cut(s) 557, 624, 734
BslI CCNNNNNNNGG 3 cut(s) 581, 582, 652
BsmAI GTCTC 2 cut(s) 236, 761
BsmFI GGGAC 3 cut(s) 557, 624, 734
BsnI GGCC 5 cut(s) 42, 685, 807, 869, 1017
Bso31I GGTCTC 1 cut(s) 236
BsoBI CYCGRG 1 cut(s) 650
Bsp1286I GDGCHC 3 cut(s) 678, 1089, 1139
Bsp1407I TGTACA 1 cut(s) 723
Bsp143I GATC 7 cut(s) 81, 666, 919, 958, 1098, 1107, 1111
Bsp1720I GCTNAGC 2 cut(s) 195, 1083
BspACI CCGC 2 cut(s) 963, 987
BspANI GGCC 5 cut(s) 42, 685, 807, 869, 1017
BspCNI CTCAG 6 cut(s) 133, 187, 701, 817, 1003, 1075
BspDI ATCGAT 1 cut(s) 1110
BspLI GGNNCC 5 cut(s) 316, 639, 640, 745, 1136
BspPI GGATC 4 cut(s) 661, 927, 953, 1115
BspT107I GGYRCC 1 cut(s) 743
BspTI CTTAAG 1 cut(s) 188
BspTNI GGTCTC 1 cut(s) 236
BsrBI CCGCTC 1 cut(s) 989
BsrDI GCAATG 2 cut(s) 222, 1065
BsrFI RCCGGY 1 cut(s) 374
BsrGI TGTACA 1 cut(s) 723
BsrI ACTGG 7 cut(s) 76, 316, 364, 632, 775, 817, 1040
BssAI RCCGGY 1 cut(s) 374
BssECI CCNNGG 4 cut(s) 171, 384, 951, 1012
BssMI GATC 7 cut(s) 81, 666, 919, 958, 1098, 1107, 1111
BssSI CACGAG 1 cut(s) 671
BssT1I CCWWGG 2 cut(s) 384, 951
Bst2BI CACGAG 1 cut(s) 671
Bst2UI CCWGG 4 cut(s) 172, 279, 786, 876
Bst4CI ACNGT 4 cut(s) 265, 332, 748, 1052
BstAFI CTTAAG 1 cut(s) 188
BstAPI GCANNNNNTGC 1 cut(s) 412
BstAUI TGTACA 1 cut(s) 723
BstC8I GCNNGC 2 cut(s) 408, 417
BstDEI CTNAG 6 cut(s) 141, 195, 688, 825, 990, 1083
BstENI CCTNNNNNAGG 1 cut(s) 650
BstF5I GGATG 4 cut(s) 394, 472, 724, 961
BstKTI GATC 7 cut(s) 84, 669, 922, 961, 1101, 1110, 1114
BstMAI GTCTC 2 cut(s) 236, 761
BstMBI GATC 7 cut(s) 81, 666, 919, 958, 1098, 1107, 1111
BstMWI GCNNNNNNNGC 6 cut(s) 332, 412, 416, 682, 703, 971
BstNI CCWGG 4 cut(s) 172, 279, 786, 876
BstNSI RCATGY 1 cut(s) 410
BstPAI GACNNNNGTC 1 cut(s) 773
BstSCI CCNGG 5 cut(s) 170, 277, 784, 874, 1012
BstV1I GCAGC 3 cut(s) 437, 440, 961
BstX2I RGATCY 2 cut(s) 666, 919
BstYI RGATCY 2 cut(s) 666, 919
Bsu15I ATCGAT 1 cut(s) 1110
BsuRI GGCC 5 cut(s) 42, 685, 807, 869, 1017
BsuTUI ATCGAT 1 cut(s) 1110
BtrI CACGTC 1 cut(s) 761
BtsCI GGATG 4 cut(s) 394, 472, 724, 961
BtsIMutI CAGTG 3 cut(s) 69, 261, 357
Cac8I GCNNGC 2 cut(s) 408, 417
Cfr10I RCCGGY 1 cut(s) 374
Cfr13I GGNCC 5 cut(s) 612, 638, 684, 806, 868
ClaI ATCGAT 1 cut(s) 1110
Csp6I GTAC 5 cut(s) 253, 484, 631, 724, 744
CspCI CAANNNNNGTGG 6 cut(s) 76, 111, 604, 639, 715, 750
CviAII CATG 5 cut(s) 44, 304, 407, 601, 851
CviQI GTAC 5 cut(s) 253, 484, 631, 724, 744
DdeI CTNAG 6 cut(s) 141, 195, 688, 825, 990, 1083
DpnI GATC 7 cut(s) 83, 668, 921, 960, 1100, 1109, 1113
DpnII GATC 7 cut(s) 81, 666, 919, 958, 1098, 1107, 1111
EaeI YGGCCR 2 cut(s) 40, 1015
Ecl136II GAGCTC 1 cut(s) 1087
Eco130I CCWWGG 2 cut(s) 384, 951
Eco24I GRGCYC 3 cut(s) 678, 1089, 1139
Eco31I GGTCTC 1 cut(s) 236
Eco47I GGWCC 2 cut(s) 612, 638
Eco53kI GAGCTC 1 cut(s) 1087
Eco57I CTGAAG 1 cut(s) 698
Eco88I CYCGRG 1 cut(s) 650
EcoICRI GAGCTC 1 cut(s) 1087
EcoNI CCTNNNNNAGG 1 cut(s) 650
EcoO109I RGGNCCY 3 cut(s) 638, 684, 868
EcoRII CCWGG 4 cut(s) 170, 277, 784, 874
EcoT14I CCWWGG 2 cut(s) 384, 951
EcoT38I GRGCYC 3 cut(s) 678, 1089, 1139
ErhI CCWWGG 2 cut(s) 384, 951
FaeI CATG 5 cut(s) 47, 307, 410, 604, 854
FalI AAGNNNNNCTT 2 cut(s) 551, 583
FaqI GGGAC 3 cut(s) 557, 624, 734
FatI CATG 5 cut(s) 43, 303, 406, 600, 850
FauI CCCGC 1 cut(s) 970
FblI GTMKAC 2 cut(s) 48, 62
Fnu4HI GCNGC 3 cut(s) 451, 454, 975
FokI GGATG 4 cut(s) 401, 479, 731, 968
FriOI GRGCYC 3 cut(s) 678, 1089, 1139
Fsp4HI GCNGC 3 cut(s) 451, 454, 975
GluI GCNGC 3 cut(s) 451, 454, 975
GsuI CTGGAG 2 cut(s) 381, 1023
HaeIII GGCC 5 cut(s) 42, 685, 807, 869, 1017
HapII CCGG 3 cut(s) 375, 703, 1014
Hin1II CATG 5 cut(s) 47, 307, 410, 604, 854
HincII GTYRAC 2 cut(s) 49, 63
HindII GTYRAC 2 cut(s) 49, 63
HindIII AAGCTT 2 cut(s) 89, 185
HinfI GANTC 4 cut(s) 50, 350, 562, 891
HpaII CCGG 3 cut(s) 375, 703, 1014
HphI GGTGA 3 cut(s) 605, 808, 890
Hpy166II GTNNAC 5 cut(s) 49, 63, 203, 615, 724
Hpy188I TCNGA 4 cut(s) 142, 396, 691, 819
Hpy188III TCNNGA 9 cut(s) 127, 241, 287, 298, 535, 650, 659, 716, 1046
Hpy8I GTNNAC 5 cut(s) 49, 63, 203, 615, 724
HpyAV CCTTC 6 cut(s) 124, 508, 532, 656, 881, 1125
HpyCH4III ACNGT 4 cut(s) 265, 332, 748, 1052
HpyCH4IV ACGT 3 cut(s) 205, 760, 897
HpyCH4V TGCA 4 cut(s) 261, 456, 847, 862
HpyF10VI GCNNNNNNNGC 6 cut(s) 332, 412, 416, 682, 703, 971
HpyF3I CTNAG 6 cut(s) 141, 195, 688, 825, 990, 1083
HpySE526I ACGT 3 cut(s) 205, 760, 897
Hsp92II CATG 5 cut(s) 47, 307, 410, 604, 854
KflI GGGWCCC 1 cut(s) 638
KpnI GGTACC 1 cut(s) 747
Kzo9I GATC 7 cut(s) 81, 666, 919, 958, 1098, 1107, 1111
LmnI GCTCC 4 cut(s) 280, 1042, 1122, 1134
Lsp1109I GCAGC 3 cut(s) 437, 440, 961
LweI GCATC 3 cut(s) 262, 457, 834
MaeII ACGT 3 cut(s) 205, 760, 897
MaeIII GTNAC 6 cut(s) 74, 287, 593, 796, 1052, 1090
MalI GATC 7 cut(s) 83, 668, 921, 960, 1100, 1109, 1113
MbiI CCGCTC 1 cut(s) 989
MboI GATC 7 cut(s) 81, 666, 919, 958, 1098, 1107, 1111
MflI RGATCY 2 cut(s) 666, 919
MhlI GDGCHC 3 cut(s) 678, 1089, 1139
MlsI TGGCCA 1 cut(s) 42
MluCI AATT 1 cut(s) 507
MluNI TGGCCA 1 cut(s) 42
MlyI GAGTC 2 cut(s) 44, 344
MmeI TCCRAC 4 cut(s) 159, 736, 868, 969
Mox20I TGGCCA 1 cut(s) 42
MscI TGGCCA 1 cut(s) 42
MseI TTAA 3 cut(s) 189, 780, 900
MslI CAYNNNNRTG 1 cut(s) 1001
Msp20I TGGCCA 1 cut(s) 42
MspCI CTTAAG 1 cut(s) 188
MspI CCGG 3 cut(s) 375, 703, 1014
MspR9I CCNGG 5 cut(s) 172, 279, 786, 876, 1014
MvaI CCWGG 4 cut(s) 172, 279, 786, 876
MwoI GCNNNNNNNGC 6 cut(s) 332, 412, 416, 682, 703, 971
NciI CCSGG 1 cut(s) 1014
NdeII GATC 7 cut(s) 81, 666, 919, 958, 1098, 1107, 1111
NlaIII CATG 5 cut(s) 47, 307, 410, 604, 854
NlaIV GGNNCC 5 cut(s) 316, 639, 640, 745, 1136
NmuCI GTSAC 5 cut(s) 74, 287, 593, 796, 1052
NspI RCATGY 1 cut(s) 410
PaeI GCATGC 1 cut(s) 410
PaeR7I CTCGAG 1 cut(s) 650
PcsI WCGNNNNNNNCGW 1 cut(s) 1107
PfeI GAWTC 2 cut(s) 562, 891
PfoI TCCNGGA 1 cut(s) 277
PkrI GCNGC 3 cut(s) 452, 455, 976
PleI GAGTC 2 cut(s) 44, 344
PpsI GAGTC 2 cut(s) 44, 344
PpuMI RGGWCCY 1 cut(s) 638
PshAI GACNNNNGTC 1 cut(s) 773
Psp124BI GAGCTC 1 cut(s) 1089
Psp1406I AACGTT 1 cut(s) 897
Psp5II RGGWCCY 1 cut(s) 638
Psp6I CCWGG 4 cut(s) 170, 277, 784, 874
PspGI CCWGG 4 cut(s) 170, 277, 784, 874
PspN4I GGNNCC 5 cut(s) 316, 639, 640, 745, 1136
PspPI GGNCC 5 cut(s) 612, 638, 684, 806, 868
PspPPI RGGWCCY 1 cut(s) 638
PsuI RGATCY 2 cut(s) 666, 919
RsaI GTAC 5 cut(s) 254, 485, 632, 725, 745
RsaNI GTAC 5 cut(s) 253, 484, 631, 724, 744
RseI CAYNNNNRTG 1 cut(s) 1001
SacI GAGCTC 1 cut(s) 1089
SalI GTCGAC 2 cut(s) 47, 61
SaqAI TTAA 3 cut(s) 189, 780, 900
SatI GCNGC 3 cut(s) 451, 454, 975
Sau3AI GATC 7 cut(s) 81, 666, 919, 958, 1098, 1107, 1111
Sau96I GGNCC 5 cut(s) 612, 638, 684, 806, 868
ScaI AGTACT 2 cut(s) 254, 485
SchI GAGTC 2 cut(s) 44, 344
ScrFI CCNGG 5 cut(s) 172, 279, 786, 876, 1014
SduI GDGCHC 3 cut(s) 678, 1089, 1139
SfaNI GCATC 3 cut(s) 262, 457, 834
Sfr274I CTCGAG 1 cut(s) 650
SinI GGWCC 2 cut(s) 612, 638
SlaI CTCGAG 1 cut(s) 650
SmiMI CAYNNNNRTG 1 cut(s) 1001
SmlI CTYRAG 6 cut(s) 188, 487, 533, 650, 923, 1126
SmoI CTYRAG 6 cut(s) 188, 487, 533, 650, 923, 1126
SphI GCATGC 1 cut(s) 410
Sse9I AATT 1 cut(s) 507
SsiI CCGC 2 cut(s) 963, 987
SstI GAGCTC 1 cut(s) 1089
StyD4I CCNGG 5 cut(s) 170, 277, 784, 874, 1012
StyI CCWWGG 2 cut(s) 384, 951
TaaI ACNGT 4 cut(s) 265, 332, 748, 1052
TaiI ACGT 3 cut(s) 208, 763, 900
TasI AATT 1 cut(s) 507
TatI WGTACW 3 cut(s) 252, 483, 723
TfiI GAWTC 2 cut(s) 562, 891
Tru1I TTAA 3 cut(s) 189, 780, 900
Tru9I TTAA 3 cut(s) 189, 780, 900
TscAI CASTG 3 cut(s) 76, 268, 364
TseFI GTSAC 5 cut(s) 74, 287, 593, 796, 1052
TseI GCWGC 3 cut(s) 450, 453, 974
Tsp45I GTSAC 5 cut(s) 74, 287, 593, 796, 1052
TspDTI ATGAA 4 cut(s) 161, 519, 867, 1019
TspRI CASTG 3 cut(s) 76, 268, 364
Vha464I CTTAAG 1 cut(s) 188
VpaK11BI GGWCC 2 cut(s) 612, 638
XagI CCTNNNNNAGG 1 cut(s) 650
XceI RCATGY 1 cut(s) 410
XcmI CCANNNNNNNNNTGG 1 cut(s) 50
XhoI CTCGAG 1 cut(s) 650
XmiI GTMKAC 2 cut(s) 48, 62
ZrmI AGTACT 2 cut(s) 254, 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.