Prupe.6G160000_v2.0.a1

Protein of unknown function (DUF502)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
14723979 .. 14732363
8385 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G160000.1

Sequence Viewer

Length: 774 bp
ATGGCCGAAGAAAAAGAGTCATCGTCGGTTCCTCTGAGTCAGGCTGAGAATGGTATTCTGGATCCCGAAGATCCAGCCAAGTCTCCTCCAAGCTCCCCCAATTCCTCTACTCGTAAGGCTTGCTGCTTTGTTCTCCAAAGTTGGGTCTCAAAGAAGTTTATGACTGGATGTGTAGTTCTTTTTCCTGTTGCTGTTACGTTCTTTGTTACATGGTGGTTTATTCAGTTTGTTGATGGTTTCTTCAGTCCACTCTATGCTCAGCTTGGCATCGACATCTTCGGACTTGGATTTGTCACATCCTTACTTTTTGTATTCTTTGTTGGCGTTTTTGTTTCATCGTGGATGGGTGCCACTGTTTTCTCACTTGGAGAATGGATCATAAAGAAAATGCCTTTTGTTAAGCATATCTACTCTGCCTCCAAACAAATTAGTGCAGCGATTTCTCCAGACCAAAATACCACAGCTTTTAAAGAGGTGGCAATTATCCGTCACCCACGTGTTGGTGAATATGCATTTGGGTTTATTACATCAACTGTCACCCTTCAGAGAGATAATGAAGATGAGGAGTTGTGTAGTGTTTTTGTCCCAACAAATCATCTATACATAGGCGATATATTTCTTGTTAACTCCAAAGAGATCATAAGACCAAATCTGTCTATTCGAGAAGGCATAGAGATAATTGTTTCTGGGGGTATGTCAATGCCCCAAATCATTTCTCCTCAACAAAGGATTGCCCAGCAGATTGAGAAAATTCCGTTGAACAGAATAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

258

Amino Acids

28.68

Weight (kDa)

5.96

Isoelectric Point (pI)

52.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 347
AccB7I CCANNNNNTGG 1 cut(s) 500
AclWI GGATC 4 cut(s) 56, 65, 69, 383
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 750
AcuI CTGAAG 2 cut(s) 226, 527
AcvI CACGTG 1 cut(s) 497
AfiI CCNNNNNNNGG 2 cut(s) 142, 500
AflIII ACRYGT 1 cut(s) 496
AgsI TTSAA 1 cut(s) 760
AjuI GAANNNNNNNTTGG 2 cut(s) 498, 530
AleI CACNNNNGTG 1 cut(s) 495
AloI GAACNNNNNNTCC 2 cut(s) 159, 191
AluBI AGCT 3 cut(s) 93, 262, 464
AluI AGCT 3 cut(s) 93, 262, 464
Alw26I GTCTC 2 cut(s) 87, 151
AlwI GGATC 4 cut(s) 56, 65, 69, 383
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 2 cut(s) 123, 434
ApoI RAATTY 1 cut(s) 750
AsuHPI GGTGA 3 cut(s) 482, 515, 529
BamHI GGATCC 1 cut(s) 61
BanI GGYRCC 1 cut(s) 347
BbrPI CACGTG 1 cut(s) 497
BbvI GCAGC 2 cut(s) 110, 446
BccI CCATC 2 cut(s) 227, 337
BcoDI GTCTC 2 cut(s) 87, 151
BisI GCNGC 2 cut(s) 124, 435
BlpI GCTNAGC 1 cut(s) 258
BlsI GCNGC 2 cut(s) 125, 436
BmiI GGNNCC 3 cut(s) 30, 63, 349
BmsI GCATC 1 cut(s) 276
BpmI CTGGAG 1 cut(s) 429
Bpu1102I GCTNAGC 1 cut(s) 258
BsaAI YACGTR 1 cut(s) 497
BsaI GGTCTC 1 cut(s) 151
BsaXI ACNNNNNCTCC 2 cut(s) 401, 431
Bsc4I CCNNNNNNNGG 2 cut(s) 142, 500
Bse1I ACTGG 1 cut(s) 169
BseGI GGATG 3 cut(s) 173, 296, 348
BseLI CCNNNNNNNGG 2 cut(s) 142, 500
BseMII CTCAG 3 cut(s) 26, 36, 272
BseNI ACTGG 1 cut(s) 169
BseRI GAGGAG 3 cut(s) 75, 578, 708
BseXI GCAGC 2 cut(s) 110, 446
BseYI CCCAGC 1 cut(s) 735
BsgI GTGCAG 1 cut(s) 453
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 347
BslFI GGGAC 1 cut(s) 569
BslI CCNNNNNNNGG 2 cut(s) 142, 500
BsmAI GTCTC 2 cut(s) 87, 151
BsmFI GGGAC 1 cut(s) 569
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 1 cut(s) 151
Bsp143I GATC 4 cut(s) 61, 70, 375, 636
Bsp1720I GCTNAGC 1 cut(s) 258
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 3 cut(s) 27, 37, 271
BspLI GGNNCC 3 cut(s) 30, 63, 349
BspPI GGATC 4 cut(s) 56, 65, 69, 383
BspT107I GGYRCC 1 cut(s) 347
BspTNI GGTCTC 1 cut(s) 151
BsrI ACTGG 1 cut(s) 169
BssMI GATC 4 cut(s) 61, 70, 375, 636
Bst4CI ACNGT 2 cut(s) 355, 535
BstBAI YACGTR 1 cut(s) 497
BstC8I GCNNGC 1 cut(s) 121
BstDEI CTNAG 3 cut(s) 35, 45, 258
BstF5I GGATG 3 cut(s) 173, 296, 348
BstKTI GATC 4 cut(s) 64, 73, 378, 639
BstMAI GTCTC 2 cut(s) 87, 151
BstMBI GATC 4 cut(s) 61, 70, 375, 636
BstV1I GCAGC 2 cut(s) 110, 446
BstX2I RGATCY 2 cut(s) 61, 70
BstYI RGATCY 2 cut(s) 61, 70
BsuRI GGCC 1 cut(s) 5
BtsCI GGATG 3 cut(s) 173, 296, 348
BtsIMutI CAGTG 1 cut(s) 351
Cac8I GCNNGC 1 cut(s) 121
CviAII CATG 1 cut(s) 210
CviJI RGCY 7 cut(s) 5, 44, 77, 93, 119, 262, 464
CviKI_1 RGCY 7 cut(s) 5, 44, 77, 93, 119, 262, 464
DdeI CTNAG 3 cut(s) 35, 45, 258
DpnI GATC 4 cut(s) 63, 72, 377, 638
DpnII GATC 4 cut(s) 61, 70, 375, 636
DraI TTTAAA 1 cut(s) 469
EaeI YGGCCR 1 cut(s) 3
Eco31I GGTCTC 1 cut(s) 151
Eco57I CTGAAG 2 cut(s) 226, 527
Eco72I CACGTG 1 cut(s) 497
EcoT22I ATGCAT 1 cut(s) 514
FaeI CATG 1 cut(s) 213
FaqI GGGAC 1 cut(s) 569
FatI CATG 1 cut(s) 209
Fnu4HI GCNGC 2 cut(s) 124, 435
FokI GGATG 3 cut(s) 180, 283, 355
Fsp4HI GCNGC 2 cut(s) 124, 435
GluI GCNGC 2 cut(s) 124, 435
GsaI CCCAGC 1 cut(s) 739
GsuI CTGGAG 1 cut(s) 429
HaeIII GGCC 1 cut(s) 5
Hin1II CATG 1 cut(s) 213
HincII GTYRAC 1 cut(s) 625
HindII GTYRAC 1 cut(s) 625
HinfI GANTC 2 cut(s) 17, 37
HpaI GTTAAC 1 cut(s) 625
HphI GGTGA 3 cut(s) 482, 515, 529
Hpy166II GTNNAC 2 cut(s) 248, 625
Hpy188I TCNGA 3 cut(s) 36, 281, 546
Hpy188III TCNNGA 4 cut(s) 59, 65, 446, 662
Hpy8I GTNNAC 2 cut(s) 248, 625
Hpy99I CGWCG 1 cut(s) 28
HpyAV CCTTC 2 cut(s) 551, 659
HpyCH4III ACNGT 2 cut(s) 355, 535
HpyCH4IV ACGT 2 cut(s) 197, 496
HpyCH4V TGCA 2 cut(s) 434, 512
HpyF3I CTNAG 3 cut(s) 35, 45, 258
HpySE526I ACGT 2 cut(s) 197, 496
Hsp92II CATG 1 cut(s) 213
KspAI GTTAAC 1 cut(s) 625
Kzo9I GATC 4 cut(s) 61, 70, 375, 636
LmnI GCTCC 1 cut(s) 98
LpnPI CCDG 8 cut(s) 26, 44, 87, 150, 198, 459, 672, 749
Lsp1109I GCAGC 2 cut(s) 110, 446
LweI GCATC 1 cut(s) 276
MaeII ACGT 2 cut(s) 197, 496
MaeIII GTNAC 5 cut(s) 193, 205, 292, 488, 535
MalI GATC 4 cut(s) 63, 72, 377, 638
MboI GATC 4 cut(s) 61, 70, 375, 636
MboII GAAGA 5 cut(s) 20, 80, 232, 268, 569
MflI RGATCY 2 cut(s) 61, 70
MluCI AATT 5 cut(s) 100, 426, 480, 678, 750
MlyI GAGTC 2 cut(s) 26, 46
MnlI CCTC 7 cut(s) 42, 96, 115, 427, 466, 556, 729
Mph1103I ATGCAT 1 cut(s) 514
MseI TTAA 3 cut(s) 399, 468, 624
MslI CAYNNNNRTG 1 cut(s) 495
NdeII GATC 4 cut(s) 61, 70, 375, 636
NlaIII CATG 1 cut(s) 213
NlaIV GGNNCC 3 cut(s) 30, 63, 349
NmuCI GTSAC 3 cut(s) 292, 488, 535
NsiI ATGCAT 1 cut(s) 514
OliI CACNNNNGTG 1 cut(s) 495
PflMI CCANNNNNTGG 1 cut(s) 500
PkrI GCNGC 2 cut(s) 125, 436
PleI GAGTC 2 cut(s) 25, 45
PmaCI CACGTG 1 cut(s) 497
PmlI CACGTG 1 cut(s) 497
PpsI GAGTC 2 cut(s) 25, 45
Ppu21I YACGTR 1 cut(s) 497
PspCI CACGTG 1 cut(s) 497
PspFI CCCAGC 1 cut(s) 735
PspN4I GGNNCC 3 cut(s) 30, 63, 349
PsuI RGATCY 2 cut(s) 61, 70
RseI CAYNNNNRTG 1 cut(s) 495
SaqAI TTAA 3 cut(s) 399, 468, 624
SatI GCNGC 2 cut(s) 124, 435
Sau3AI GATC 4 cut(s) 61, 70, 375, 636
SchI GAGTC 2 cut(s) 26, 46
SetI ASST 6 cut(s) 95, 200, 264, 466, 477, 499
SfaNI GCATC 1 cut(s) 276
SmiMI CAYNNNNRTG 1 cut(s) 495
Sse9I AATT 5 cut(s) 100, 426, 480, 678, 750
TaaI ACNGT 2 cut(s) 355, 535
TaiI ACGT 2 cut(s) 200, 499
TaqI TCGA 2 cut(s) 270, 661
TasI AATT 5 cut(s) 100, 426, 480, 678, 750
Tru1I TTAA 3 cut(s) 399, 468, 624
Tru9I TTAA 3 cut(s) 399, 468, 624
TscAI CASTG 1 cut(s) 358
TseFI GTSAC 3 cut(s) 292, 488, 535
TseI GCWGC 2 cut(s) 123, 434
Tsp45I GTSAC 3 cut(s) 292, 488, 535
TspDTI ATGAA 2 cut(s) 324, 570
TspGWI ACGGA 2 cut(s) 476, 744
TspRI CASTG 1 cut(s) 358
Van91I CCANNNNNTGG 1 cut(s) 500
XapI RAATTY 1 cut(s) 750
Zsp2I ATGCAT 1 cut(s) 514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.