Prupe.6G164800_v2.0.a1
MYB Family

Myb/SANT-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
16193333 .. 16194009
677 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G164800.1

Sequence Viewer

Length: 558 bp
ATGGAGTCTGAAAATACACAACAAGTAAATGGAAAAGGGAAGAGCAAACAAGATTATAATGCTTGGACTGTGGAAGAGAGTAGAATGTTGTTGCAACTCATGGTTGATGCTACAAGCCATGGATGGCGTGATGCTAATGGAATGCTAAGCAAGGCAACTGTAGAAACCAAACTACTCCCCAAGATTAATGAAAAACTTAGGTGTCACAAAACCTATTCTCAATACCAGAGTCGGCTGAAGTACTTTAAAAGAGAATACCAGAAATACTCACAGCTTCTCCATCCAACCACAAAGAAATTCACTGCTCCTGAAGAAGTTTGGAAAGACTACTTTAAGTCCCACTCAAAAGACACAAGTATTCAAACAAAAACTTGTGAGGACTACGAGGATCTGCAAATTGTAATTGGGAATGCAACTGCTATTGGAAGAAACTCATTAGGATTGGATGATGATACTGATGGAAGAACTTTTAGGGCGGAAGATAGATATGTTGGAATAGAGGACTTTGTCTTTGATGATGAAAGTCAGGAGGATGAAGAAATTTATGAAACAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

186

Amino Acids

21.62

Weight (kDa)

5.12

Isoelectric Point (pI)

39.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 57
AciI CCGC 1 cut(s) 476
AclWI GGATC 1 cut(s) 396
AcsI RAATTY 2 cut(s) 296, 540
AcuI CTGAAG 2 cut(s) 257, 330
AfaI GTAC 1 cut(s) 242
AgsI TTSAA 1 cut(s) 362
AluBI AGCT 1 cut(s) 274
AluI AGCT 1 cut(s) 274
AlwI GGATC 1 cut(s) 396
ApoI RAATTY 2 cut(s) 296, 540
ArsI GACNNNNNNTTYG 2 cut(s) 494, 526
AseI ATTAAT 1 cut(s) 186
BccI CCATC 3 cut(s) 117, 288, 452
BfmI CTRYAG 1 cut(s) 159
BlpI GCTNAGC 1 cut(s) 146
BmcAI AGTACT 1 cut(s) 242
BmsI GCATC 2 cut(s) 97, 121
Bpu1102I GCTNAGC 1 cut(s) 146
BsaJI CCNNGG 1 cut(s) 118
BsaXI ACNNNNNCTCC 2 cut(s) 261, 291
BseDI CCNNGG 1 cut(s) 118
BseGI GGATG 4 cut(s) 128, 280, 451, 538
BslFI GGGAC 1 cut(s) 322
BsmFI GGGAC 1 cut(s) 322
BsmI GAATGC 2 cut(s) 147, 415
Bsp143I GATC 1 cut(s) 388
Bsp1720I GCTNAGC 1 cut(s) 146
Bsp19I CCATGG 1 cut(s) 118
BspACI CCGC 1 cut(s) 476
BspPI GGATC 1 cut(s) 396
BspQI GCTCTTC 1 cut(s) 35
BssECI CCNNGG 1 cut(s) 118
BssMI GATC 1 cut(s) 388
BssT1I CCWWGG 1 cut(s) 118
Bst4CI ACNGT 2 cut(s) 70, 160
Bst6I CTCTTC 2 cut(s) 35, 69
BstDEI CTNAG 2 cut(s) 146, 197
BstDSI CCRYGG 1 cut(s) 118
BstF5I GGATG 4 cut(s) 128, 280, 451, 538
BstKTI GATC 1 cut(s) 391
BstMBI GATC 1 cut(s) 388
BstSFI CTRYAG 1 cut(s) 159
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
BtgI CCRYGG 1 cut(s) 118
BtsCI GGATG 4 cut(s) 128, 280, 451, 538
BtsI GCAGTG 1 cut(s) 300
BtsIMutI CAGTG 1 cut(s) 300
Csp6I GTAC 1 cut(s) 241
CviAII CATG 2 cut(s) 100, 119
CviJI RGCY 3 cut(s) 117, 235, 274
CviKI_1 RGCY 3 cut(s) 117, 235, 274
CviQI GTAC 1 cut(s) 241
DdeI CTNAG 2 cut(s) 146, 197
DpnI GATC 1 cut(s) 390
DpnII GATC 1 cut(s) 388
DraI TTTAAA 1 cut(s) 247
Eam1104I CTCTTC 2 cut(s) 35, 69
EarI CTCTTC 2 cut(s) 35, 69
EciI GGCGGA 1 cut(s) 491
Eco130I CCWWGG 1 cut(s) 118
Eco57I CTGAAG 2 cut(s) 257, 330
EcoT14I CCWWGG 1 cut(s) 118
ErhI CCWWGG 1 cut(s) 118
FaeI CATG 2 cut(s) 103, 122
FaiI YATR 5 cut(s) 57, 101, 120, 489, 546
FaqI GGGAC 1 cut(s) 322
FatI CATG 2 cut(s) 99, 118
FokI GGATG 4 cut(s) 135, 267, 458, 545
Hin1II CATG 2 cut(s) 103, 122
HinfI GANTC 2 cut(s) 5, 229
Hpy188I TCNGA 1 cut(s) 10
Hpy188III TCNNGA 2 cut(s) 308, 527
HpyCH4III ACNGT 2 cut(s) 70, 160
HpyCH4V TGCA 3 cut(s) 94, 394, 413
HpyF3I CTNAG 2 cut(s) 146, 197
Hsp92II CATG 2 cut(s) 103, 122
Kzo9I GATC 1 cut(s) 388
LguI GCTCTTC 1 cut(s) 35
LmnI GCTCC 1 cut(s) 310
LpnPI CCDG 4 cut(s) 239, 272, 321, 512
LweI GCATC 2 cut(s) 97, 121
MaeIII GTNAC 1 cut(s) 203
MalI GATC 1 cut(s) 390
MboI GATC 1 cut(s) 388
MboII GAAGA 7 cut(s) 52, 86, 323, 438, 474, 491, 548
MflI RGATCY 1 cut(s) 388
MluCI AATT 5 cut(s) 296, 396, 402, 540, 552
MlyI GAGTC 2 cut(s) 14, 238
MmeI TCCRAC 2 cut(s) 308, 472
MnlI CCTC 4 cut(s) 370, 379, 493, 523
MseI TTAA 3 cut(s) 186, 246, 333
Mva1269I GAATGC 2 cut(s) 147, 415
NcoI CCATGG 1 cut(s) 118
NdeII GATC 1 cut(s) 388
NlaIII CATG 2 cut(s) 103, 122
NmuCI GTSAC 1 cut(s) 203
PciSI GCTCTTC 1 cut(s) 35
PctI GAATGC 2 cut(s) 147, 415
PflFI GACNNNGTC 1 cut(s) 506
PleI GAGTC 2 cut(s) 13, 237
PpsI GAGTC 2 cut(s) 13, 237
PshBI ATTAAT 1 cut(s) 186
PsiI TTATAA 1 cut(s) 57
PsuI RGATCY 1 cut(s) 388
PsyI GACNNNGTC 1 cut(s) 506
RsaI GTAC 1 cut(s) 242
RsaNI GTAC 1 cut(s) 241
SapI GCTCTTC 1 cut(s) 35
SaqAI TTAA 3 cut(s) 186, 246, 333
Sau3AI GATC 1 cut(s) 388
ScaI AGTACT 1 cut(s) 242
SchI GAGTC 2 cut(s) 14, 238
SetI ASST 3 cut(s) 203, 215, 276
SfaNI GCATC 2 cut(s) 97, 121
SfcI CTRYAG 1 cut(s) 159
Sse9I AATT 5 cut(s) 296, 396, 402, 540, 552
SsiI CCGC 1 cut(s) 476
StyI CCWWGG 1 cut(s) 118
TaaI ACNGT 2 cut(s) 70, 160
TasI AATT 5 cut(s) 296, 396, 402, 540, 552
TatI WGTACW 1 cut(s) 240
Tru1I TTAA 3 cut(s) 186, 246, 333
Tru9I TTAA 3 cut(s) 186, 246, 333
TscAI CASTG 1 cut(s) 307
TseFI GTSAC 1 cut(s) 203
Tsp45I GTSAC 1 cut(s) 203
TspDTI ATGAA 3 cut(s) 204, 534, 549
TspRI CASTG 1 cut(s) 307
Tth111I GACNNNGTC 1 cut(s) 506
VspI ATTAAT 1 cut(s) 186
XapI RAATTY 2 cut(s) 296, 540
ZrmI AGTACT 1 cut(s) 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.