Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0003160

Physical Location & Seq

Genomic Coordinates Reverse (-)

18726068 .. 18727494

Gene Structure 1427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G180700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 558 bp

ATGTTGTTAGGGAAGCGTCCCCGCCCTCCGATGAGGAGGACAACAAGCATGACTGGGATCACCGTTGATCTGAACAACGTGGAAGGAGAGGAACCGACGGATGTACATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGATGGTGGTGGGCCCACAACAAGTGCCTGCTGCTGCAGTTAATAATAATAATAATATTGAGAGCATGGACATGAAGAACAACAACTTTGGGTACCATGAACAGCACCGTTTCCTGGCCATGTTGTCTCCCAGAAACAACCACCGAACAACCTCGGCTGCTCATGACGTCGTTGAGACCGCTCACTTTCTCCGCACGTGCGGCCTCTGCAAACGCCACTTGGCTTCAGGCCGGGACATCTACATGTATAGGGGAGACACCGCATTTTGTAGCCTAGAATGCAGAGAGCAACAGATGAAGCAAGATGAGAGAGTAGAGAAGTGTAAGGCCGTGTCCTCAAAGAAGGACGACCGCCACGCCTCGCGATCCACCTCGACCAACTCCAAGGCTTCCGGTAAGAGCCAGACGGTGGCTGCCGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-FLZ

Protein Analysis

186

Amino Acids

20.27

Weight (kDa)

9.22

Isoelectric Point (pI)

44.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003160)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22160 AT1G78020
fragaria_vesca	FvH4_1g21440 FvH4_5g37970 FvH4_5g37970
malus_domestica	MD00G1073400.v1.1 MD01G1025300.v1.1 MD08G1178500.v1.1 MD15G1363900.v1.1
prunus_persica	Prupe.1G512200_v2.0.a1 Prupe.6G180700_v2.0.a1
pyrus_communis	pycom01g05330 pycom08g15280 pycom15g29830 pycom15g32690
rosa_chinensis	RchiOBHm_Chr2g0115261 RchiOBHm_Chr7g0239911
rosa_laevigata	RLG00000000719 RLG00000018170
rosa_multiflora	Rmu_co8373487.1_g000001 Rmu_sc0000540.1_g000047 Rmu_sc0001626.1_g000049 Rmu_sc0002784.1_g000062
rosa_roxburghii	Rroxscaffold_2G00130800 Rroxscaffold_3G00220690
rosa_rugosa	Rorug02G0195400 Rorug07G0331100
rosa_samantha	Rh2AG253300 Rh2BG263500 Rh2CG258200 Rh2DG261500 Rh7AG484500 Rh7BG457700 Rh7CG502000 Rh7DG470200
rosa_wichuraiana	Rw2G019800 Rw7G040650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	306
Acc65I	GGTACC	1 cut(s)	228
AccB1I	GGYRCC	1 cut(s)	228
AccB7I	CCANNNNNTGG	1 cut(s)	544
AccBSI	CCGCTC	1 cut(s)	317
AccII	CGCG	1 cut(s)	499
AciI	CCGC	7 cut(s)	22, 315, 328, 336, 396, 487, 552
AclWI	GGATC	2 cut(s)	65, 495
AcoI	YGGCCR	1 cut(s)	252
AcuI	CTGAAG	1 cut(s)	345
AcvI	CACGTG	1 cut(s)	333
AcyI	GRCGYC	1 cut(s)	303
AfaI	GTAC	2 cut(s)	105, 230
AfiI	CCNNNNNNNGG	2 cut(s)	250, 544
AflIII	ACRYGT	1 cut(s)	378
AjnI	CCWGG	1 cut(s)	249
Alw26I	GTCTC	3 cut(s)	267, 305, 384
AlwI	GGATC	2 cut(s)	65, 495
AoxI	GGCC	5 cut(s)	148, 252, 337, 364, 462
ApaI	GGGCCC	1 cut(s)	152
Asp718I	GGTACC	1 cut(s)	228
AspS9I	GGNCC	2 cut(s)	148, 149
AsuC2I	CCSGG	1 cut(s)	368
AsuHPI	GGTGA	1 cut(s)	52
BaeGI	GKGCMC	1 cut(s)	152
BalI	TGGCCA	1 cut(s)	254
BanI	GGYRCC	1 cut(s)	228
BanII	GRGCYC	1 cut(s)	152
BbrPI	CACGTG	1 cut(s)	333
BccI	CCATC	1 cut(s)	133
BceAI	ACGGC	1 cut(s)	449
BciT130I	CCWGG	1 cut(s)	251
BcnI	CCSGG	1 cut(s)	368
BcoDI	GTCTC	3 cut(s)	267, 305, 384
BfaI	CTAG	1 cut(s)	410
BfmI	CTRYAG	1 cut(s)	171
Bme1390I	CCNGG	2 cut(s)	251, 368
BmgT120I	GGNCC	2 cut(s)	148, 149
BmiI	GGNNCC	3 cut(s)	93, 150, 230
BmrFI	CCNGG	2 cut(s)	251, 368
BmrI	ACTGGG	1 cut(s)	63
BmuI	ACTGGG	1 cut(s)	63
BpuMI	CCSGG	1 cut(s)	368
BsaAI	YACGTR	1 cut(s)	333
BsaHI	GRCGYC	1 cut(s)	303
BsaI	GGTCTC	1 cut(s)	305
BsaJI	CCNNGG	2 cut(s)	288, 519
BsaWI	WCCGGW	1 cut(s)	527
Bsc4I	CCNNNNNNNGG	2 cut(s)	250, 544
Bse1I	ACTGG	1 cut(s)	58
BseBI	CCWGG	1 cut(s)	251
BseDI	CCNNGG	2 cut(s)	288, 519
BseGI	GGATG	1 cut(s)	106
BseLI	CCNNNNNNNGG	2 cut(s)	250, 544
BseNI	ACTGG	1 cut(s)	58
BseRI	GAGGAG	1 cut(s)	49
BseSI	GKGCMC	1 cut(s)	152
Bsh1236I	CGCG	1 cut(s)	499
Bsh1285I	CGRYCG	1 cut(s)	487
BshFI	GGCC	5 cut(s)	150, 254, 339, 366, 464
BshNI	GGYRCC	1 cut(s)	228
BsiEI	CGRYCG	1 cut(s)	487
BsiSI	CCGG	2 cut(s)	367, 528
BslFI	GGGAC	2 cut(s)	3, 383
BslI	CCNNNNNNNGG	2 cut(s)	250, 544
BsmAI	GTCTC	3 cut(s)	267, 305, 384
BsmFI	GGGAC	2 cut(s)	3, 383
BsmI	GAATGC	1 cut(s)	419
BsnI	GGCC	5 cut(s)	150, 254, 339, 366, 464
Bso31I	GGTCTC	1 cut(s)	305
Bsp120I	GGGCCC	1 cut(s)	148
Bsp1286I	GDGCHC	1 cut(s)	152
Bsp1407I	TGTACA	1 cut(s)	103
Bsp143I	GATC	3 cut(s)	57, 67, 500
Bsp68I	TCGCGA	1 cut(s)	499
BspACI	CCGC	7 cut(s)	22, 315, 328, 336, 396, 487, 552
BspANI	GGCC	5 cut(s)	150, 254, 339, 366, 464
BspFNI	CGCG	1 cut(s)	499
BspHI	TCATGA	1 cut(s)	298
BspLI	GGNNCC	3 cut(s)	93, 150, 230
BspMAI	CTGCAG	1 cut(s)	175
BspPI	GGATC	2 cut(s)	65, 495
BspT107I	GGYRCC	1 cut(s)	228
BspTNI	GGTCTC	1 cut(s)	305
BsrBI	CCGCTC	1 cut(s)	317
BsrGI	TGTACA	1 cut(s)	103
BsrI	ACTGG	1 cut(s)	58
BssECI	CCNNGG	2 cut(s)	288, 519
BssMI	GATC	3 cut(s)	57, 67, 500
BssNI	GRCGYC	1 cut(s)	303
BssT1I	CCWWGG	1 cut(s)	519
Bst2UI	CCWGG	1 cut(s)	251
Bst4CI	ACNGT	3 cut(s)	64, 245, 544
BstACI	GRCGYC	1 cut(s)	303
BstAUI	TGTACA	1 cut(s)	103
BstBAI	YACGTR	1 cut(s)	333
BstC8I	GCNNGC	1 cut(s)	165
BstF5I	GGATG	1 cut(s)	106
BstFNI	CGCG	1 cut(s)	499
BstKTI	GATC	3 cut(s)	60, 70, 503
BstMAI	GTCTC	3 cut(s)	267, 305, 384
BstMBI	GATC	3 cut(s)	57, 67, 500
BstMCI	CGRYCG	1 cut(s)	487
BstNI	CCWGG	1 cut(s)	251
BstNSI	RCATGY	2 cut(s)	110, 382
BstSCI	CCNGG	2 cut(s)	249, 366
BstSFI	CTRYAG	1 cut(s)	171
BstSLI	GKGCMC	1 cut(s)	152
BstUI	CGCG	1 cut(s)	499
BsuRI	GGCC	5 cut(s)	150, 254, 339, 366, 464
BtgZI	GCGATG	1 cut(s)	152
BtsCI	GGATG	1 cut(s)	106
BtuMI	TCGCGA	1 cut(s)	499
Cac8I	GCNNGC	1 cut(s)	165
CciI	TCATGA	1 cut(s)	298
Cfr13I	GGNCC	2 cut(s)	148, 149
CseI	GACGC	1 cut(s)	5
Csp6I	GTAC	2 cut(s)	104, 229
CviAII	CATG	8 cut(s)	49, 107, 202, 208, 233, 256, 299, 379
CviQI	GTAC	2 cut(s)	104, 229
DpnI	GATC	3 cut(s)	59, 69, 502
DpnII	GATC	3 cut(s)	57, 67, 500
EaeI	YGGCCR	1 cut(s)	252
Eco130I	CCWWGG	1 cut(s)	519
Eco24I	GRGCYC	1 cut(s)	152
Eco31I	GGTCTC	1 cut(s)	305
Eco57I	CTGAAG	1 cut(s)	345
Eco72I	CACGTG	1 cut(s)	333
EcoRII	CCWGG	1 cut(s)	249
EcoT14I	CCWWGG	1 cut(s)	519
EcoT38I	GRGCYC	1 cut(s)	152
ErhI	CCWWGG	1 cut(s)	519
FaeI	CATG	8 cut(s)	52, 110, 205, 211, 236, 259, 302, 382
FaiI	YATR	9 cut(s)	50, 108, 203, 209, 234, 257, 300, 380, 384
FaqI	GGGAC	2 cut(s)	3, 383
FatI	CATG	8 cut(s)	48, 106, 201, 207, 232, 255, 298, 378
FauI	CCCGC	1 cut(s)	29
FokI	GGATG	1 cut(s)	113
FriOI	GRGCYC	1 cut(s)	152
FspBI	CTAG	1 cut(s)	410
HaeIII	GGCC	5 cut(s)	150, 254, 339, 366, 464
HapII	CCGG	2 cut(s)	367, 528
HgaI	GACGC	1 cut(s)	5
Hin1I	GRCGYC	1 cut(s)	303
Hin1II	CATG	8 cut(s)	52, 110, 205, 211, 236, 259, 302, 382
HpaII	CCGG	2 cut(s)	367, 528
HphI	GGTGA	1 cut(s)	52
Hpy188I	TCNGA	2 cut(s)	30, 72
Hpy188III	TCNNGA	2 cut(s)	299, 498
Hpy99I	CGWCG	2 cut(s)	100, 308
HpyAV	CCTTC	2 cut(s)	77, 472
HpyCH4III	ACNGT	3 cut(s)	64, 245, 544
HpyCH4IV	ACGT	3 cut(s)	78, 303, 332
HpyCH4V	TGCA	4 cut(s)	110, 173, 345, 417
HpySE526I	ACGT	3 cut(s)	78, 303, 332
Hsp92I	GRCGYC	1 cut(s)	303
Hsp92II	CATG	8 cut(s)	52, 110, 205, 211, 236, 259, 302, 382
KpnI	GGTACC	1 cut(s)	232
Kzo9I	GATC	3 cut(s)	57, 67, 500
LpnPI	CCDG	9 cut(s)	39, 177, 236, 263, 280, 348, 380, 541, 551
MaeI	CTAG	1 cut(s)	410
MaeII	ACGT	3 cut(s)	78, 303, 332
MalI	GATC	3 cut(s)	59, 69, 502
MbiI	CCGCTC	1 cut(s)	317
MboI	GATC	3 cut(s)	57, 67, 500
MboII	GAAGA	1 cut(s)	223
MhlI	GDGCHC	1 cut(s)	152
MlsI	TGGCCA	1 cut(s)	254
MluNI	TGGCCA	1 cut(s)	254
MnlI	CCTC	9 cut(s)	27, 30, 36, 82, 298, 350, 481, 505, 517
Mox20I	TGGCCA	1 cut(s)	254
MscI	TGGCCA	1 cut(s)	254
MseI	TTAA	1 cut(s)	177
MslI	CAYNNNNRTG	2 cut(s)	206, 377
Msp20I	TGGCCA	1 cut(s)	254
MspI	CCGG	2 cut(s)	367, 528
MspR9I	CCNGG	2 cut(s)	251, 368
Mva1269I	GAATGC	1 cut(s)	419
MvaI	CCWGG	1 cut(s)	251
MvnI	CGCG	1 cut(s)	499
NciI	CCSGG	1 cut(s)	368
NdeII	GATC	3 cut(s)	57, 67, 500
NlaIII	CATG	8 cut(s)	52, 110, 205, 211, 236, 259, 302, 382
NlaIV	GGNNCC	3 cut(s)	93, 150, 230
NmeAIII	GCCGAG	1 cut(s)	269
NruI	TCGCGA	1 cut(s)	499
NspI	RCATGY	2 cut(s)	110, 382
PagI	TCATGA	1 cut(s)	298
PciI	ACATGT	1 cut(s)	378
PctI	GAATGC	1 cut(s)	419
PflMI	CCANNNNNTGG	1 cut(s)	544
PmaCI	CACGTG	1 cut(s)	333
PmlI	CACGTG	1 cut(s)	333
Ppu21I	YACGTR	1 cut(s)	333
PscI	ACATGT	1 cut(s)	378
Psp6I	CCWGG	1 cut(s)	249
PspCI	CACGTG	1 cut(s)	333
PspGI	CCWGG	1 cut(s)	249
PspN4I	GGNNCC	3 cut(s)	93, 150, 230
PspOMI	GGGCCC	1 cut(s)	148
PspPI	GGNCC	2 cut(s)	148, 149
PstI	CTGCAG	1 cut(s)	175
RruI	TCGCGA	1 cut(s)	499
RsaI	GTAC	2 cut(s)	105, 230
RsaNI	GTAC	2 cut(s)	104, 229
RseI	CAYNNNNRTG	2 cut(s)	206, 377
SaqAI	TTAA	1 cut(s)	177
Sau3AI	GATC	3 cut(s)	57, 67, 500
Sau96I	GGNCC	2 cut(s)	148, 149
ScrFI	CCNGG	2 cut(s)	251, 368
SduI	GDGCHC	1 cut(s)	152
SetI	ASST	5 cut(s)	81, 290, 306, 335, 509
SfcI	CTRYAG	1 cut(s)	171
SmiMI	CAYNNNNRTG	2 cut(s)	206, 377
SsiI	CCGC	7 cut(s)	22, 315, 328, 336, 396, 487, 552
SspI	AATATT	1 cut(s)	193
SspMI	CTAG	1 cut(s)	410
StyD4I	CCNGG	2 cut(s)	249, 366
StyI	CCWWGG	1 cut(s)	519
TaaI	ACNGT	3 cut(s)	64, 245, 544
TaiI	ACGT	3 cut(s)	81, 306, 335
TaqI	TCGA	1 cut(s)	509
TatI	WGTACW	1 cut(s)	103
TauI	GCSGC	2 cut(s)	339, 554
Tru1I	TTAA	1 cut(s)	177
Tru9I	TTAA	1 cut(s)	177
TspDTI	ATGAA	3 cut(s)	224, 249, 446
TspGWI	ACGGA	1 cut(s)	113
Van91I	CCANNNNNTGG	1 cut(s)	544
XceI	RCATGY	2 cut(s)	110, 382
XspI	CTAG	1 cut(s)	410
ZraI	GACGTC	1 cut(s)	304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.