Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003898

Physical Location & Seq

Genomic Coordinates Forward (+)

12763899 .. 12766812

Gene Structure 2914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G095100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1098 bp

ATGCAATCAAAGATCAGTGCCTTCTTCAAACCCTCTCCTTCTTTTTCAATAAAATTAGCAGACGCACCTCCGACTTCGAGCGACGGAGACGACGACGAATTGGCCATCTGGGAAAAGACGCAGCACCAATATTGTAACACCTACAAGCGAAGAGATCGAAACCTTCAAAGGGGTGAAAGTGACAGAGGTTCAGTTAACCAGTTGGCGGACAGACCCATTTTAGATAATAATTCTGGGAAGCCAAAATCATTCACATTGGGAAGAACAGTGGTGAAGAACAAGAAGAGAAGTTATGCTCAGTTCTATTTAGAGTTTGGTCAGTCTGATTTTAATCTGCACACATGTTCCACCTGTGGGGTCAAGTATACCGCTGGAGATGAAGAGGATGAGAAGGCTCACAAGGCATTTCACAAGGACTATACCCGTGGAATTCAATTCAAGGGATGGTACAATGAAAGGGTTGTTCATACGCCTTCGGCTGAAGGAGGTCGGATTGTTTTGGTGTTAGATTGTGACCCTGCTGCTCAGAGAAACAAGGTTGGGGAAGTTGTGAAGATGATGGAGAGTGAACTTGGAAGTGGATGGATTTTGCACAAGTTGTGTAAGGTGTACCTGTTCATTTTGTCCCAAAGGATTGTTGGGTGTCTAGTTGCAGAGCCAATAAAAGAAGCACACAAAGTCCTCTCATGTGCAGTTAATGGAAGTTCTGATGGTACTACTACAAATGAAACAAAACTAACCACTCTCCAATTTGGGGATATCAGATTTCAAAGGGAAGTCATGAGAAAAGCCCCTTCTGTTCCTGAAGCTTTGAACGAGAATCTCAACGGTGCTATATTTTGTGAAGAGGAAGCAGTGCCTGCTGTCTGTGGCATCAGAGCCATTTGGGTCACTCAAGCTAACAGAAGAAAACACATAGCCACCCAGTTACTGGATGCCCTGAGGAAAAGTTTCTGCATGGGATTTGTCCTTGAACACTCTCAATTGGCATTCTCTCAACCAACATCAGCTGGAAAGGCTTTGGCATCCAATTATATTGGTGGTGGATATTTTTTGGTGTACAAAACCAACAATCTTAAAGGTCCAGATTCTATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000070 GO:0000278 GO:0000280 GO:0000724 GO:0000725 GO:0000819 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007135 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009553 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009956 GO:0009987 GO:0010154 GO:0016043 GO:0016407 GO:0016740 GO:0016746 GO:0016747 GO:0022402 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0034085 GO:0034089 GO:0034641 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0045132 GO:0045144 GO:0046483 GO:0048229 GO:0048285 GO:0048316 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048589 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051177 GO:0051276 GO:0051321 GO:0051716 GO:0060771 GO:0060772 GO:0061458 GO:0061983 GO:0070192 GO:0071704 GO:0071840 GO:0080186 GO:0090304 GO:0090567 GO:0098813 GO:0099402 GO:0140013 GO:0140014 GO:1901360 GO:1903046 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_13 zf-C2H2_3

Protein Analysis

366

Amino Acids

40.66

Weight (kDa)

8.78

Isoelectric Point (pI)

36.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31400 AT4G31400
fragaria_vesca	FvH4_6g20270
malus_domestica	MD10G1054000.v1.1 MD12G1039800.v1.1 MD14G1038400.v1.1
prunus_persica	Prupe.7G095100_v2.0.a1
pyrus_communis	pycom01g00980 pycom12g03380
rosa_chinensis	RchiOBHm_Chr1g0331051 RchiOBHm_Chr3g0475861
rosa_laevigata	RLG00000001160 RLG00000023805 RLG00000029757
rosa_multiflora	Rmu_sc0000539.1_g000091 Rmu_sc0000539.1_g000092 Rmu_sc0002515.1_g000002
rosa_roxburghii	Rroxscaffold_3G00226030 Rroxscaffold_4G00319510 Rroxscaffold_6G00405780
rosa_rugosa	Rorug01G0093800 Rorug03G0151800 Rorug07G0290800
rosa_samantha	Rh1AG113600 Rh1CG110400 Rh1DG119200 Rh3AG201800 Rh3BG232300 Rh3CG226900 Rh3DG227400 Rh7BG417600 Rh7CG466100
rosa_wichuraiana	Rw1G009260 Rw3G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	931
AccI	GTMKAC	1 cut(s)	365
AciI	CCGC	2 cut(s)	206, 369
AcoI	YGGCCR	1 cut(s)	102
AcsI	RAATTY	1 cut(s)	429
AcuI	CTGAAG	2 cut(s)	501, 825
AfaI	GTAC	4 cut(s)	449, 611, 715, 1061
AfiI	CCNNNNNNNGG	5 cut(s)	169, 205, 354, 754, 931
AflIII	ACRYGT	1 cut(s)	341
AgsI	TTSAA	8 cut(s)	28, 48, 167, 434, 439, 770, 814, 974
AluBI	AGCT	3 cut(s)	809, 899, 1010
AluI	AGCT	3 cut(s)	809, 899, 1010
Alw26I	GTCTC	1 cut(s)	81
AlwNI	CAGNNNCTG	2 cut(s)	860, 931
AoxI	GGCC	1 cut(s)	102
ApeKI	GCWGC	2 cut(s)	121, 521
ApoI	RAATTY	1 cut(s)	429
Asp700I	GAANNNNTTC	1 cut(s)	950
AspS9I	GGNCC	1 cut(s)	1082
AsuHPI	GGTGA	2 cut(s)	185, 283
AvaII	GGWCC	1 cut(s)	1082
AxyI	CCTNAGG	1 cut(s)	941
BalI	TGGCCA	1 cut(s)	104
BbvI	GCAGC	2 cut(s)	133, 508
BccI	CCATC	5 cut(s)	113, 438, 553, 576, 704
BcoDI	GTCTC	1 cut(s)	81
BfaI	CTAG	1 cut(s)	647
BisI	GCNGC	2 cut(s)	122, 522
BlsI	GCNGC	2 cut(s)	123, 523
Bme18I	GGWCC	1 cut(s)	1082
BmgT120I	GGNCC	1 cut(s)	1082
BmrI	ACTGGG	1 cut(s)	919
BmsI	GCATC	3 cut(s)	882, 925, 1034
BmuI	ACTGGG	1 cut(s)	919
BpmI	CTGGAG	1 cut(s)	393
BpuEI	CTTGAG	1 cut(s)	879
BsaBI	GATNNNNATC	1 cut(s)	330
BsaJI	CCNNGG	1 cut(s)	424
Bsc4I	CCNNNNNNNGG	5 cut(s)	169, 205, 354, 754, 931
Bse1I	ACTGG	3 cut(s)	199, 925, 936
Bse21I	CCTNAGG	1 cut(s)	941
Bse8I	GATNNNNATC	1 cut(s)	330
BseDI	CCNNGG	1 cut(s)	424
BseGI	GGATG	5 cut(s)	391, 449, 587, 940, 1025
BseJI	GATNNNNATC	1 cut(s)	330
BseLI	CCNNNNNNNGG	5 cut(s)	169, 205, 354, 754, 931
BseMII	CTCAG	3 cut(s)	311, 539, 932
BseNI	ACTGG	3 cut(s)	199, 925, 936
BseXI	GCAGC	2 cut(s)	133, 508
BsgI	GTGCAG	2 cut(s)	320, 711
BshFI	GGCC	1 cut(s)	104
BslFI	GGGAC	1 cut(s)	610
BslI	CCNNNNNNNGG	5 cut(s)	169, 205, 354, 754, 931
BsmAI	GTCTC	1 cut(s)	81
BsmBI	CGTCTC	1 cut(s)	81
BsmFI	GGGAC	1 cut(s)	610
BsmI	GAATGC	1 cut(s)	989
BsnI	GGCC	1 cut(s)	104
Bsp1407I	TGTACA	1 cut(s)	1059
Bsp143I	GATC	2 cut(s)	12, 154
BspACI	CCGC	2 cut(s)	206, 369
BspANI	GGCC	1 cut(s)	104
BspCNI	CTCAG	3 cut(s)	310, 538, 933
BspHI	TCATGA	1 cut(s)	780
BsrGI	TGTACA	1 cut(s)	1059
BsrI	ACTGG	3 cut(s)	199, 925, 936
BssECI	CCNNGG	1 cut(s)	424
BssMI	GATC	2 cut(s)	12, 154
BssNAI	GTATAC	1 cut(s)	366
Bst1107I	GTATAC	1 cut(s)	366
Bst4CI	ACNGT	2 cut(s)	268, 830
Bst6I	CTCTTC	4 cut(s)	145, 278, 375, 840
BstAPI	GCANNNNNTGC	1 cut(s)	860
BstAUI	TGTACA	1 cut(s)	1059
BstC8I	GCNNGC	1 cut(s)	861
BstDEI	CTNAG	3 cut(s)	297, 525, 941
BstDSI	CCRYGG	1 cut(s)	424
BstF5I	GGATG	5 cut(s)	391, 449, 587, 940, 1025
BstKTI	GATC	2 cut(s)	15, 157
BstMAI	GTCTC	1 cut(s)	81
BstMBI	GATC	2 cut(s)	12, 154
BstMWI	GCNNNNNNNGC	3 cut(s)	401, 860, 1016
BstNSI	RCATGY	1 cut(s)	345
BstV1I	GCAGC	2 cut(s)	133, 508
BstZ17I	GTATAC	1 cut(s)	366
Bsu36I	CCTNAGG	1 cut(s)	941
BsuRI	GGCC	1 cut(s)	104
BtgI	CCRYGG	1 cut(s)	424
BtsCI	GGATG	5 cut(s)	391, 449, 587, 940, 1025
BtsI	GCAGTG	1 cut(s)	861
BtsIMutI	CAGTG	3 cut(s)	22, 273, 861
Cac8I	GCNNGC	1 cut(s)	861
CaiI	CAGNNNCTG	2 cut(s)	860, 931
CciI	TCATGA	1 cut(s)	780
Cfr13I	GGNCC	1 cut(s)	1082
CseI	GACGC	2 cut(s)	71, 127
Csp6I	GTAC	4 cut(s)	448, 610, 714, 1060
CviAII	CATG	4 cut(s)	342, 687, 781, 958
CviQI	GTAC	4 cut(s)	448, 610, 714, 1060
DdeI	CTNAG	3 cut(s)	297, 525, 941
DpnI	GATC	2 cut(s)	14, 156
DpnII	GATC	2 cut(s)	12, 154
EaeI	YGGCCR	1 cut(s)	102
Eam1104I	CTCTTC	4 cut(s)	145, 278, 375, 840
EarI	CTCTTC	4 cut(s)	145, 278, 375, 840
EciI	GGCGGA	1 cut(s)	221
Eco32I	GATATC	1 cut(s)	760
Eco47I	GGWCC	1 cut(s)	1082
Eco57I	CTGAAG	2 cut(s)	501, 825
Eco81I	CCTNAGG	1 cut(s)	941
EcoRI	GAATTC	1 cut(s)	429
EcoRV	GATATC	1 cut(s)	760
Esp3I	CGTCTC	1 cut(s)	81
FaeI	CATG	4 cut(s)	345, 690, 784, 961
FaqI	GGGAC	1 cut(s)	610
FatI	CATG	4 cut(s)	341, 686, 780, 957
FblI	GTMKAC	1 cut(s)	365
Fnu4HI	GCNGC	2 cut(s)	122, 522
FokI	GGATG	5 cut(s)	398, 456, 594, 947, 1012
Fsp4HI	GCNGC	2 cut(s)	122, 522
FspBI	CTAG	1 cut(s)	647
GluI	GCNGC	2 cut(s)	122, 522
GsuI	CTGGAG	1 cut(s)	393
HaeIII	GGCC	1 cut(s)	104
HgaI	GACGC	2 cut(s)	71, 127
Hin1II	CATG	4 cut(s)	345, 690, 784, 961
HincII	GTYRAC	1 cut(s)	196
HindII	GTYRAC	1 cut(s)	196
HindIII	AAGCTT	1 cut(s)	807
HinfI	GANTC	2 cut(s)	820, 1088
HpaI	GTTAAC	1 cut(s)	196
HphI	GGTGA	2 cut(s)	185, 283
Hpy166II	GTNNAC	5 cut(s)	196, 366, 569, 610, 1060
Hpy188I	TCNGA	7 cut(s)	72, 325, 492, 528, 709, 764, 878
Hpy188III	TCNNGA	3 cut(s)	781, 803, 1085
Hpy8I	GTNNAC	5 cut(s)	196, 366, 569, 610, 1060
Hpy99I	CGWCG	3 cut(s)	86, 95, 98
HpyAV	CCTTC	7 cut(s)	31, 48, 173, 385, 476, 483, 804
HpyCH4III	ACNGT	2 cut(s)	268, 830
HpyCH4V	TGCA	6 cut(s)	4, 337, 592, 653, 692, 957
HpyF10VI	GCNNNNNNNGC	3 cut(s)	401, 860, 1016
HpyF3I	CTNAG	3 cut(s)	297, 525, 941
Hsp92II	CATG	4 cut(s)	345, 690, 784, 961
KspAI	GTTAAC	1 cut(s)	196
Kzo9I	GATC	2 cut(s)	12, 154
Lsp1109I	GCAGC	2 cut(s)	133, 508
LweI	GCATC	3 cut(s)	882, 925, 1034
MaeI	CTAG	1 cut(s)	647
MaeIII	GTNAC	5 cut(s)	134, 179, 512, 889, 927
MalI	GATC	2 cut(s)	14, 156
MboI	GATC	2 cut(s)	12, 154
MboII	GAAGA	9 cut(s)	16, 162, 273, 286, 295, 392, 565, 857, 918
MfeI	CAATTG	1 cut(s)	983
MlsI	TGGCCA	1 cut(s)	104
MluCI	AATT	8 cut(s)	53, 98, 229, 429, 434, 749, 983, 1030
MluNI	TGGCCA	1 cut(s)	104
MmeI	TCCRAC	2 cut(s)	95, 470
MnlI	CCTC	8 cut(s)	43, 78, 179, 376, 479, 692, 841, 936
Mox20I	TGGCCA	1 cut(s)	104
MroXI	GAANNNNTTC	1 cut(s)	950
MscI	TGGCCA	1 cut(s)	104
MseI	TTAA	5 cut(s)	195, 330, 696, 1077, 1096
Msp20I	TGGCCA	1 cut(s)	104
MspA1I	CMGCKG	2 cut(s)	371, 1010
MunI	CAATTG	1 cut(s)	983
Mva1269I	GAATGC	1 cut(s)	989
MwoI	GCNNNNNNNGC	3 cut(s)	401, 860, 1016
NdeII	GATC	2 cut(s)	12, 154
NlaIII	CATG	4 cut(s)	345, 690, 784, 961
NmuCI	GTSAC	3 cut(s)	179, 512, 889
NspI	RCATGY	1 cut(s)	345
PagI	TCATGA	1 cut(s)	780
PciI	ACATGT	1 cut(s)	341
PcsI	WCGNNNNNNNCGW	1 cut(s)	90
PctI	GAATGC	1 cut(s)	989
PdmI	GAANNNNTTC	1 cut(s)	950
PfeI	GAWTC	2 cut(s)	820, 1088
PflMI	CCANNNNNTGG	1 cut(s)	931
PkrI	GCNGC	2 cut(s)	123, 523
PscI	ACATGT	1 cut(s)	341
PspPI	GGNCC	1 cut(s)	1082
PstNI	CAGNNNCTG	2 cut(s)	860, 931
PvuII	CAGCTG	1 cut(s)	1010
RsaI	GTAC	4 cut(s)	449, 611, 715, 1061
RsaNI	GTAC	4 cut(s)	448, 610, 714, 1060
SaqAI	TTAA	5 cut(s)	195, 330, 696, 1077, 1096
SatI	GCNGC	2 cut(s)	122, 522
Sau3AI	GATC	2 cut(s)	12, 154
Sau96I	GGNCC	1 cut(s)	1082
SfaNI	GCATC	3 cut(s)	882, 925, 1034
SinI	GGWCC	1 cut(s)	1082
SmlI	CTYRAG	1 cut(s)	894
SmoI	CTYRAG	1 cut(s)	894
Sse9I	AATT	8 cut(s)	53, 98, 229, 429, 434, 749, 983, 1030
SsiI	CCGC	2 cut(s)	206, 369
SspI	AATATT	1 cut(s)	131
SspMI	CTAG	1 cut(s)	647
TaaI	ACNGT	2 cut(s)	268, 830
TaqI	TCGA	2 cut(s)	77, 157
TasI	AATT	8 cut(s)	53, 98, 229, 429, 434, 749, 983, 1030
TatI	WGTACW	1 cut(s)	1059
TfiI	GAWTC	2 cut(s)	820, 1088
Tru1I	TTAA	5 cut(s)	195, 330, 696, 1077, 1096
Tru9I	TTAA	5 cut(s)	195, 330, 696, 1077, 1096
TscAI	CASTG	3 cut(s)	22, 273, 861
TseFI	GTSAC	3 cut(s)	179, 512, 889
TseI	GCWGC	2 cut(s)	121, 521
Tsp45I	GTSAC	3 cut(s)	179, 512, 889
TspDTI	ATGAA	5 cut(s)	393, 455, 468, 607, 741
TspGWI	ACGGA	1 cut(s)	99
TspRI	CASTG	3 cut(s)	22, 273, 861
Van91I	CCANNNNNTGG	1 cut(s)	931
VpaK11BI	GGWCC	1 cut(s)	1082
XapI	RAATTY	1 cut(s)	429
XceI	RCATGY	1 cut(s)	345
XcmI	CCANNNNNNNNNTGG	2 cut(s)	635, 928
XmiI	GTMKAC	1 cut(s)	365
XmnI	GAANNNNTTC	1 cut(s)	950
XspI	CTAG	1 cut(s)	647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.